ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal10h12 |
|---|---|
| Clone Library Name | barley_pub |
>WT1_PIG (O62651) Wilms' tumor protein homolog| Length = 449 Score = 35.4 bits (80), Expect = 0.14 Identities = 21/70 (30%), Positives = 36/70 (51%) Frame = +1 Query: 331 CSFKPSPRPGLEDQAAATGCRMRPAAMPLPACLPSLSCIRSLMAVSMTWQCSSNFSRKPA 510 C ++P P QA++ RM P A LP+CL S IR+ ++T+ + ++ P+ Sbjct: 107 CRYEPFGPPP-PSQASSGQARMFPNAPYLPSCLESQPAIRNQGYSTVTFDGTPSYGHTPS 165 Query: 511 TQRSAFASHS 540 + F +HS Sbjct: 166 HHAAQFPNHS 175
>WT1_HUMAN (P19544) Wilms' tumor protein (WT33)| Length = 449 Score = 34.3 bits (77), Expect = 0.31 Identities = 21/70 (30%), Positives = 35/70 (50%) Frame = +1 Query: 331 CSFKPSPRPGLEDQAAATGCRMRPAAMPLPACLPSLSCIRSLMAVSMTWQCSSNFSRKPA 510 C + P P QA++ RM P A LP+CL S IR+ ++T+ + ++ P+ Sbjct: 107 CRYGPFGPPP-PSQASSGQARMFPNAPYLPSCLESQPAIRNQGYSTVTFDGTPSYGHTPS 165 Query: 511 TQRSAFASHS 540 + F +HS Sbjct: 166 HHAAQFPNHS 175
>WT1_MOUSE (P22561) Wilms' tumor protein homolog| Length = 449 Score = 33.9 bits (76), Expect = 0.40 Identities = 21/70 (30%), Positives = 35/70 (50%) Frame = +1 Query: 331 CSFKPSPRPGLEDQAAATGCRMRPAAMPLPACLPSLSCIRSLMAVSMTWQCSSNFSRKPA 510 C + P P QA++ RM P A LP+CL S IR+ ++T+ + ++ P+ Sbjct: 107 CRYGPFGPPP-PSQASSGQARMFPNAPYLPSCLESQPTIRNQGYSTVTFDGAPSYGHTPS 165 Query: 511 TQRSAFASHS 540 + F +HS Sbjct: 166 HHAAQFPNHS 175
>WT1_RAT (P49952) Wilms' tumor protein homolog| Length = 448 Score = 33.9 bits (76), Expect = 0.40 Identities = 21/70 (30%), Positives = 35/70 (50%) Frame = +1 Query: 331 CSFKPSPRPGLEDQAAATGCRMRPAAMPLPACLPSLSCIRSLMAVSMTWQCSSNFSRKPA 510 C + P P QA++ RM P A LP+CL S IR+ ++T+ + ++ P+ Sbjct: 106 CRYGPFGPPP-PSQASSGQARMFPNAPYLPSCLESQPSIRNQGYSTVTFDGAPSYGHTPS 164 Query: 511 TQRSAFASHS 540 + F +HS Sbjct: 165 HHAAQFPNHS 174
>PKN3_MOUSE (Q8K045) Serine/threonine-protein kinase N3 (EC 2.7.11.13) (Protein| kinase PKN-beta) (Protein-kinase C-related kinase 3) Length = 878 Score = 33.1 bits (74), Expect = 0.68 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 7/53 (13%) Frame = +1 Query: 310 SNF----SLSRCSFKPSPRPG---LEDQAAATGCRMRPAAMPLPACLPSLSCI 447 SNF +LS+ KP P+P L++ A T C RP P PA +P+L+ + Sbjct: 485 SNFLPMKTLSKEDTKPPPKPPRLYLQEPAPGTPCTKRPHMDPRPAVVPALAAL 537
>CB024_HUMAN (Q9BV87) Protein C2orf24| Length = 410 Score = 32.0 bits (71), Expect = 1.5 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 4/48 (8%) Frame = +1 Query: 346 SPRPGLEDQAAATGCRMRPAAMPLPACLPS----LSCIRSLMAVSMTW 477 +P PG D + C + P +P CLPS SC+ M + W Sbjct: 262 TPTPGPPDLGLTSRCLLEPCIPSVPQCLPSPANVSSCLEGSMGLRSLW 309
>TA2R7_GORGO (Q646A2) Taste receptor type 2 member 7 (T2R7)| Length = 318 Score = 30.0 bits (66), Expect = 5.8 Identities = 20/74 (27%), Positives = 33/74 (44%) Frame = -1 Query: 230 CFFCLLVEDVRACVYCFTVLYYADVYSRGVWCRASTYYVERVFFLKLCGESFVALVLCRL 51 C C+++ D CFT++ Y DVY+ G R ++ L + + A L Sbjct: 57 CLLCIILLD------CFTLVLYPDVYATGKEMRIIDFFWTLTNHLSI----WFATCLSIY 106 Query: 50 YXFVMRDGYVPFFL 9 Y F + + + P FL Sbjct: 107 YFFKIGNFFHPLFL 120
>GOGA2_HUMAN (Q08379) Golgin subfamily A member 2 (Cis-Golgi matrix protein| GM130) (Gm130 autoantigen) (Golgin-95) Length = 990 Score = 30.0 bits (66), Expect = 5.8 Identities = 29/126 (23%), Positives = 62/126 (49%), Gaps = 23/126 (18%) Frame = -1 Query: 623 KINKLRETVKAQQEKLQTVAKTAGINHEEWLANADRWVAGF--LEKFEEHCH---VMETA 459 K+++L+ETV+ + ++ Q++ + +++L + ++VA + L +E H +++T Sbjct: 578 KLSELKETVELKSQEAQSLQQ----QRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQ 633 Query: 458 IKDRIQXRLGRQAGKGIA----------------AGLMRQPVAAA*S--SRPGLGDGLNE 333 + D++Q + + GK +A A Q + A S + PG GDGL+ Sbjct: 634 LVDQLQQQEAQ--GKAVAEMARQELQETQERLEAATQQNQQLRAQLSLMAHPGEGDGLDR 691 Query: 332 HRESEK 315 E ++ Sbjct: 692 EEEEDE 697
>CH601_PROMP (Q7V2M3) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)| Length = 581 Score = 30.0 bits (66), Expect = 5.8 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Frame = -1 Query: 584 EKLQTVAKTAGINHEEWLANADRWVAGFLEKFEEHCHVMETAIKDRIQ-XRLGRQAGKGI 408 E + +AK AG N + +A+ R GF E+ ++ E+ I D + RL Q I Sbjct: 448 EPTKQIAKNAGFNGDVVIADIKRLGKGFNANNGEYENLNESGILDPTKVIRLALQDSVSI 507 Query: 407 AAGLMRQPVAAA*SSRPGLGDG 342 AA ++ VA A P G Sbjct: 508 AAMIITTEVAVADIPEPEAAPG 529
>CB024_PONPY (Q5R4U5) Protein C2orf24 homolog| Length = 410 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Frame = +1 Query: 346 SPRPGLEDQAAATGCRMRPAAMPLPACLPS----LSCIRSLMAVSMTW 477 +P PG D + C + P +P CLPS SC+ + W Sbjct: 262 TPTPGPPDLGLTSRCLLEPCIPSVPQCLPSPANVSSCLEGSTGLRSLW 309
>SYD_STRA1 (Q3JYL7) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 583 Score = 29.3 bits (64), Expect = 9.9 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = -1 Query: 617 NKLRETVKAQQEKLQTVAKTAGINHEEWLANADRWVAGFLEKFEEHCHVMETAIKDRIQX 438 NK + + +KL +AK G WL AD ++G + KF TAI+DR+ Sbjct: 324 NKADKYSRKNIDKLTEIAKQYGAKGLAWLKYADNTISGPVAKF-------LTAIEDRLTE 376 Query: 437 RL 432 L Sbjct: 377 AL 378 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,742,613 Number of Sequences: 219361 Number of extensions: 1580483 Number of successful extensions: 5245 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 5070 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5242 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
