| Clone Name | rbaal10h12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197904.1| Oryza sativa (japonica cultivar-group) putative cholinephosphate cytidylyltransferase (OSJNBa0056G17.15), mRNA Length = 995 Score = 167 bits (84), Expect = 5e-38 Identities = 150/172 (87%) Strand = Plus / Minus Query: 452 ccttgatggcagtctccatgacgtggcagtgctcctcgaacttctccaggaagcccgcca 511 ||||||||||||| |||||| ||||||||| ||||| |||||||||| ||| || || | Sbjct: 915 ccttgatggcagtttccatgttgtggcagtgttcctcaaacttctccaagaaaccagcaa 856 Query: 512 cccagcgatccgcgttcgccagccactcttcgtggtttatcccagccgtcttcgccaccg 571 |||||||||| || || |||| ||| ||||| || ||||| ||||| ||||||||||||| Sbjct: 855 cccagcgatctgcattggccaaccattcttcatgatttattccagctgtcttcgccaccg 796 Query: 572 tttgcaacttttcttgctgcgccttcacagtctcccgcagtttattgatctt 623 |||||||||||||||| |||||||| |||||||| ||||||||||| ||||| Sbjct: 795 tttgcaacttttcttgatgcgcctttacagtctctcgcagtttatttatctt 744
>gb|AF140496.2| Oryza sativa (japonica cultivar-group) cholinephosphate cytidylyltransferase (CPCT) mRNA, complete cds Length = 1464 Score = 167 bits (84), Expect = 5e-38 Identities = 150/172 (87%) Strand = Plus / Minus Query: 452 ccttgatggcagtctccatgacgtggcagtgctcctcgaacttctccaggaagcccgcca 511 ||||||||||||| |||||| ||||||||| ||||| |||||||||| ||| || || | Sbjct: 939 ccttgatggcagtttccatgttgtggcagtgttcctcaaacttctccaagaaaccagcaa 880 Query: 512 cccagcgatccgcgttcgccagccactcttcgtggtttatcccagccgtcttcgccaccg 571 |||||||||| || || |||| ||| ||||| || ||||| ||||| ||||||||||||| Sbjct: 879 cccagcgatctgcattggccaaccattcttcatgatttattccagctgtcttcgccaccg 820 Query: 572 tttgcaacttttcttgctgcgccttcacagtctcccgcagtttattgatctt 623 |||||||||||||||| |||||||| |||||||| ||||||||||| ||||| Sbjct: 819 tttgcaacttttcttgatgcgcctttacagtctctcgcagtttatttatctt 768 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 269 actcgcacaagcatcacattccatgacacaagcacaca 306 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1164 actcgtacaagcatcacattccatgacacaagcacaca 1127 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 136 caccaaacgcctctgctatagacat 160 ||||||||||||||||||||||||| Sbjct: 1274 caccaaacgcctctgctatagacat 1250
>dbj|AK073939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076F05, full insert sequence Length = 1436 Score = 167 bits (84), Expect = 5e-38 Identities = 150/172 (87%) Strand = Plus / Minus Query: 452 ccttgatggcagtctccatgacgtggcagtgctcctcgaacttctccaggaagcccgcca 511 ||||||||||||| |||||| ||||||||| ||||| |||||||||| ||| || || | Sbjct: 948 ccttgatggcagtttccatgttgtggcagtgttcctcaaacttctccaagaaaccagcaa 889 Query: 512 cccagcgatccgcgttcgccagccactcttcgtggtttatcccagccgtcttcgccaccg 571 |||||||||| || || |||| ||| ||||| || ||||| ||||| ||||||||||||| Sbjct: 888 cccagcgatctgcattggccaaccattcttcatgatttattccagctgtcttcgccaccg 829 Query: 572 tttgcaacttttcttgctgcgccttcacagtctcccgcagtttattgatctt 623 |||||||||||||||| |||||||| |||||||| ||||||||||| ||||| Sbjct: 828 tttgcaacttttcttgatgcgcctttacagtctctcgcagtttatttatctt 777 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 269 actcgcacaagcatcacattccatgacacaagcacaca 306 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1173 actcgtacaagcatcacattccatgacacaagcacaca 1136 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 136 caccaaacgcctctgctatagacat 160 ||||||||||||||||||||||||| Sbjct: 1283 caccaaacgcctctgctatagacat 1259
>dbj|AK060631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A03, full insert sequence Length = 1165 Score = 159 bits (80), Expect = 1e-35 Identities = 149/172 (86%) Strand = Plus / Minus Query: 452 ccttgatggcagtctccatgacgtggcagtgctcctcgaacttctccaggaagcccgcca 511 ||||||||||||| |||||| ||||||||| ||||| |||||||||| ||| || || | Sbjct: 899 ccttgatggcagtttccatgttgtggcagtgttcctcaaacttctccaagaaaccagcaa 840 Query: 512 cccagcgatccgcgttcgccagccactcttcgtggtttatcccagccgtcttcgccaccg 571 |||||||||| || || |||| ||| | ||| || ||||| ||||| ||||||||||||| Sbjct: 839 cccagcgatctgcattggccaaccatttttcatgatttattccagctgtcttcgccaccg 780 Query: 572 tttgcaacttttcttgctgcgccttcacagtctcccgcagtttattgatctt 623 |||||||||||||||| |||||||| |||||||| ||||||||||| ||||| Sbjct: 779 tttgcaacttttcttgatgcgcctttacagtctctcgcagtttatttatctt 728 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 269 actcgcacaagcatcacattccatgacacaagcacaca 306 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1124 actcgtacaagcatcacattccatgacacaagcacaca 1087
>gb|BT016584.1| Zea mays clone Contig417 mRNA sequence Length = 1300 Score = 153 bits (77), Expect = 8e-34 Identities = 166/196 (84%) Strand = Plus / Minus Query: 428 tccccagcctntcctgtatccggtccttgatggcagtctccatgacgtggcagtgctcct 487 |||| ||||| ||||||||||| |||||||| ||||| ||||| ||||||||| | || Sbjct: 916 tccctagcctctcctgtatccgatccttgatcgcagtttccatattgtggcagtgttgct 857 Query: 488 cgaacttctccaggaagcccgccacccagcgatccgcgttcgccagccactcttcgtggt 547 | |||||||| ||||| || || |||||||||||||| || || ||||| ||||| || | Sbjct: 856 caaacttctctaggaaaccagcaacccagcgatccgcattagcaagccattcttcatgat 797 Query: 548 ttatcccagccgtcttcgccaccgtttgcaacttttcttgctgcgccttcacagtctccc 607 | | ||||| ||||| ||||| |||||||||||||| || || |||||||||||||||| Sbjct: 796 tcaaaccagcagtctttgccactgtttgcaacttttcctgatgtgccttcacagtctccc 737 Query: 608 gcagtttattgatctt 623 |||||||||||||||| Sbjct: 736 gcagtttattgatctt 721 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 135 acaccaaacgcctctgctatagacat 160 ||||||||||||||| |||||||||| Sbjct: 1140 acaccaaacgcctctcctatagacat 1115
>gb|AY112644.1| Zea mays CL24723_1 mRNA sequence Length = 639 Score = 153 bits (77), Expect = 8e-34 Identities = 166/196 (84%) Strand = Plus / Plus Query: 428 tccccagcctntcctgtatccggtccttgatggcagtctccatgacgtggcagtgctcct 487 |||| ||||| ||||||||||| |||||||| ||||| ||||| ||||||||| | || Sbjct: 357 tccctagcctctcctgtatccgatccttgatcgcagtttccatattgtggcagtgttgct 416 Query: 488 cgaacttctccaggaagcccgccacccagcgatccgcgttcgccagccactcttcgtggt 547 | |||||||| ||||| || || |||||||||||||| || || ||||| ||||| || | Sbjct: 417 caaacttctctaggaaaccagcaacccagcgatccgcattagcaagccattcttcatgat 476 Query: 548 ttatcccagccgtcttcgccaccgtttgcaacttttcttgctgcgccttcacagtctccc 607 | | ||||| ||||| ||||| |||||||||||||| || || |||||||||||||||| Sbjct: 477 tcaaaccagcagtctttgccactgtttgcaacttttcctgatgtgccttcacagtctccc 536 Query: 608 gcagtttattgatctt 623 |||||||||||||||| Sbjct: 537 gcagtttattgatctt 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 135 acaccaaacgcctctgctatagacat 160 ||||||||||||||| |||||||||| Sbjct: 132 acaccaaacgcctctcctatagacat 157
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 474 gtggcagtgctcctcgaacttctccaggaagcccgccacccagcgatccgcgttcgccag 533 ||||||||| ||||| |||||||||| ||| || || ||||||||||| || || |||| Sbjct: 14411 gtggcagtgttcctcaaacttctccaagaaaccagcaacccagcgatctgcattggccaa 14470 Query: 534 ccactcttcgtggtttatcccagccgtcttcgccaccgtttgcaact 580 ||| ||||| || ||||| ||||| |||||||||||||||||||||| Sbjct: 14471 ccattcttcatgatttattccagctgtcttcgccaccgtttgcaact 14517 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 269 actcgcacaagcatcacattccatgacacaagcacaca 306 ||||| |||||||||||||||||||||||||||||||| Sbjct: 14042 actcgtacaagcatcacattccatgacacaagcacaca 14079 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 579 cttttcttgctgcgccttcacagtctcccgcagtttattgatctt 623 ||||||||| |||||||| |||||||| ||||||||||| ||||| Sbjct: 14635 cttttcttgatgcgcctttacagtctctcgcagtttatttatctt 14679 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 136 caccaaacgcctctgctatagacat 160 ||||||||||||||||||||||||| Sbjct: 13932 caccaaacgcctctgctatagacat 13956
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 474 gtggcagtgctcctcgaacttctccaggaagcccgccacccagcgatccgcgttcgccag 533 ||||||||| ||||| |||||||||| ||| || || ||||||||||| || || |||| Sbjct: 22559742 gtggcagtgttcctcaaacttctccaagaaaccagcaacccagcgatctgcattggccaa 22559801 Query: 534 ccactcttcgtggtttatcccagccgtcttcgccaccgtttgcaact 580 ||| ||||| || ||||| ||||| |||||||||||||||||||||| Sbjct: 22559802 ccattcttcatgatttattccagctgtcttcgccaccgtttgcaact 22559848 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 269 actcgcacaagcatcacattccatgacacaagcacaca 306 ||||| |||||||||||||||||||||||||||||||| Sbjct: 22559373 actcgtacaagcatcacattccatgacacaagcacaca 22559410 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 579 cttttcttgctgcgccttcacagtctcccgcagtttattgatctt 623 ||||||||| |||||||| |||||||| ||||||||||| ||||| Sbjct: 22559966 cttttcttgatgcgcctttacagtctctcgcagtttatttatctt 22560010 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 136 caccaaacgcctctgctatagacat 160 ||||||||||||||||||||||||| Sbjct: 22559263 caccaaacgcctctgctatagacat 22559287
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 474 gtggcagtgctcctcgaacttctccaggaagcccgccacccagcgatccgcgttcgccag 533 ||||||||| ||||| |||||||||| ||| || || ||||||||||| || || |||| Sbjct: 22572210 gtggcagtgttcctcaaacttctccaagaaaccagcaacccagcgatctgcattggccaa 22572269 Query: 534 ccactcttcgtggtttatcccagccgtcttcgccaccgtttgcaact 580 ||| ||||| || ||||| ||||| |||||||||||||||||||||| Sbjct: 22572270 ccattcttcatgatttattccagctgtcttcgccaccgtttgcaact 22572316 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 269 actcgcacaagcatcacattccatgacacaagcacaca 306 ||||| |||||||||||||||||||||||||||||||| Sbjct: 22571841 actcgtacaagcatcacattccatgacacaagcacaca 22571878 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 579 cttttcttgctgcgccttcacagtctcccgcagtttattgatctt 623 ||||||||| |||||||| |||||||| ||||||||||| ||||| Sbjct: 22572434 cttttcttgatgcgcctttacagtctctcgcagtttatttatctt 22572478 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 136 caccaaacgcctctgctatagacat 160 ||||||||||||||||||||||||| Sbjct: 22571731 caccaaacgcctctgctatagacat 22571755
>gb|AC022150.6| Homo sapiens chromosome 19 clone CTD-3099C6, complete sequence Length = 228156 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 538 tcttcgtggtttatcccagccgtcttc 564 ||||||||||||| ||||||||||||| Sbjct: 17224 tcttcgtggtttagcccagccgtcttc 17250
>gb|AC160471.10| Mus musculus chromosome 7, clone RP23-432D9, complete sequence Length = 222272 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 183 acaatacacacacgcacgcaca 204 |||||||||||||||||||||| Sbjct: 199844 acaatacacacacgcacgcaca 199865
>ref|XM_955695.1| Neurospora crassa OR74A hypothetical protein (NCU08966.1) partial mRNA Length = 3666 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 410 tgcctttgccggcctgcctccc 431 |||||||||||||||||||||| Sbjct: 264 tgcctttgccggcctgcctccc 285
>ref|XM_331357.1| Neurospora crassa OR74A hypothetical protein (NCU08966.1) partial mRNA Length = 3666 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 410 tgcctttgccggcctgcctccc 431 |||||||||||||||||||||| Sbjct: 264 tgcctttgccggcctgcctccc 285
>gb|AC119211.8| Mus musculus chromosome 7, clone RP24-191C15, complete sequence Length = 172286 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 183 acaatacacacacgcacgcaca 204 |||||||||||||||||||||| Sbjct: 152072 acaatacacacacgcacgcaca 152051
>gb|AC112521.4| Mus musculus BAC clone RP23-186C6 from 9, complete sequence Length = 230334 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 gcatcacattccatgacacaag 300 |||||||||||||||||||||| Sbjct: 44238 gcatcacattccatgacacaag 44259
>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence Length = 125129 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 179 tgaaacaatacacacacgcacgcaca 204 ||||||||||||||||||||| |||| Sbjct: 5297 tgaaacaatacacacacgcacacaca 5272
>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence Length = 110437 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 179 tgaaacaatacacacacgcacgcaca 204 ||||||||||||||||||||| |||| Sbjct: 20968 tgaaacaatacacacacgcacacaca 20993
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence Length = 129197 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 179 tgaaacaatacacacacgcacgcaca 204 ||||||||||||||||||||| |||| Sbjct: 31227 tgaaacaatacacacacgcacacaca 31252
>gb|AC119193.9| Mus musculus chromosome 7, clone RP24-178L6, complete sequence Length = 162310 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 183 acaatacacacacgcacgcaca 204 |||||||||||||||||||||| Sbjct: 72668 acaatacacacacgcacgcaca 72647
>gb|AC147637.3| Mus musculus BAC clone RP23-205M20 from 9, complete sequence Length = 211684 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 gcatcacattccatgacacaag 300 |||||||||||||||||||||| Sbjct: 129555 gcatcacattccatgacacaag 129576
>ref|XM_472231.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 579 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 482 gctcctcgaacttctccagga 502 ||||||||||||||||||||| Sbjct: 351 gctcctcgaacttctccagga 371
>gb|AE000659.1|HUAE000659 Homo sapiens T-cell receptor alpha delta locus from bases 250472 to 501670 (section 2 of 5) of the Complete Nucleotide Sequence Length = 251199 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 75064 acaaagaacaagggcaacaaa 75044
>gb|AC011294.3| Homo sapiens BAC clone RP11-95J15 from 7, complete sequence Length = 166715 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 30123 acaaagaacaagggcaacaaa 30103
>emb|Z98880.1|HS179P9 Human DNA sequence from clone RP1-179P9 on chromosome 6q22 Contains the 3' part of the ROS1 gene for v-ros UR2 sarcoma virus oncogene homolog 1 (avian), a novel gene and two CpG islands, complete sequence Length = 108260 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 7041 acaaagaacaagggcaacaaa 7061
>emb|AL589791.4| Human DNA sequence from clone RP11-505P2 on chromosome 13, complete sequence Length = 161474 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 65236 acaaagaacaagggcaacaaa 65256
>emb|AL390068.13| Human DNA sequence from clone RP13-185D13 on chromosome X, complete sequence Length = 97681 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 43851 acaaagaacaagggcaacaaa 43831
>emb|AL162393.15| Human DNA sequence from clone RP11-534I8 on chromosome 9 Contains a programmed cell death 2 (PDCD2) pseudogene, the 5' end of the gene for a novel C2H2 type zinc finger protein and two CpG islands, complete sequence Length = 184302 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 105934 acaaagaacaagggcaacaaa 105914
>emb|AL158828.14| Human DNA sequence from clone RP11-359J6 on chromosome 9 Contains a novel gene and a novel pseudogene, complete sequence Length = 213728 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 113985 acaaagaacaagggcaacaaa 113965
>emb|AL139185.9| Human DNA sequence from clone RP11-75E6 on chromosome 13q31.1-31.3, complete sequence Length = 123500 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 66358 acaaagaacaagggcaacaaa 66378
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 482 gctcctcgaacttctccagga 502 ||||||||||||||||||||| Sbjct: 79719 gctcctcgaacttctccagga 79739
>gb|AC127898.6| Homo sapiens 12 BAC RP11-373K20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159557 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 23373 acaaagaacaagggcaacaaa 23393
>gb|AC117945.2| Homo sapiens chromosome 1 clone RP4-614N24, complete sequence Length = 160557 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 133028 acaaagaacaagggcaacaaa 133048
>gb|AC020912.6| Homo sapiens chromosome 19 clone CTD-2583G20, complete sequence Length = 163225 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 1748 acaaagaacaagggcaacaaa 1728
>gb|AC078911.11| Mus musculus Strain C57BL6/J Chromosome 2 RP23-111A22, complete sequence Length = 200329 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 caatacacacacgcacgcaca 204 ||||||||||||||||||||| Sbjct: 177590 caatacacacacgcacgcaca 177610
>gb|AC022392.5| Homo sapiens chromosome 10 clone RP11-150D20, complete sequence Length = 196467 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 139175 acaaagaacaagggcaacaaa 139195
>gb|AC092052.2| Homo sapiens chromosome 3 clone RP11-329N16, complete sequence Length = 203204 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 155803 acaaagaacaagggcaacaaa 155823
>gb|AC020980.6| Homo sapiens chromosome 5 clone RPCI-1_167G20, complete sequence Length = 175177 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 29069 acaaagaacaagggcaacaaa 29089
>gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complete sequence Length = 240957 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 161504 acaaagaacaagggcaacaaa 161524
>gb|AC068037.5| Homo sapiens BAC clone RP11-757K22 from 4, complete sequence Length = 206136 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 152198 acaaagaacaagggcaacaaa 152218
>gb|AC087174.4| Homo sapiens chromosome 11, clone RP11-640J11, complete sequence Length = 187218 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 42327 acaaagaacaagggcaacaaa 42307
>gb|AC092038.3| Homo sapiens chromosome 3 clone RP11-89F18, complete sequence Length = 170948 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 39195 acaaagaacaagggcaacaaa 39215
>gb|AC020897.7| Homo sapiens chromosome 19 clone CTC-400I9, complete sequence Length = 133704 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 123301 acaaagaacaagggcaacaaa 123281
>gb|AC016583.8| Homo sapiens chromosome 5 clone CTD-2591A1, complete sequence Length = 184769 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 105555 acaaagaacaagggcaacaaa 105535
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 482 gctcctcgaacttctccagga 502 ||||||||||||||||||||| Sbjct: 18611853 gctcctcgaacttctccagga 18611873
>gb|AC018797.4| Homo sapiens BAC clone RP11-10L12 from 4, complete sequence Length = 190670 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 67048 acaaagaacaagggcaacaaa 67068
>gb|AC079080.5| Homo sapiens BAC clone RP11-162O12 from 4, complete sequence Length = 161647 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 85043 acaaagaacaagggcaacaaa 85023
>gb|AC156945.2| Pan troglodytes BAC clone CH251-464H12 from chromosome unknown, complete sequence Length = 184973 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 96086 acaaagaacaagggcaacaaa 96106
>gb|AC092623.2| Homo sapiens BAC clone RP11-260E12 from 2, complete sequence Length = 172344 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 87460 acaaagaacaagggcaacaaa 87480
>gb|AF224669.1|AF213884S2 Homo sapiens mannosidase, beta A, lysosomal (MANBA) gene, and ubiquitin-conjugating enzyme E2D 3 (UBE2D3) genes, complete cds Length = 266941 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 145292 acaaagaacaagggcaacaaa 145312
>dbj|AK104769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A04, full insert sequence Length = 1019 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 482 gctcctcgaacttctccagga 502 ||||||||||||||||||||| Sbjct: 551 gctcctcgaacttctccagga 571
>dbj|AK104271.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F10, full insert sequence Length = 1019 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 482 gctcctcgaacttctccagga 502 ||||||||||||||||||||| Sbjct: 551 gctcctcgaacttctccagga 571
>dbj|AK067334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102N12, full insert sequence Length = 1087 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 482 gctcctcgaacttctccagga 502 ||||||||||||||||||||| Sbjct: 648 gctcctcgaacttctccagga 668
>emb|CR626874.10| Zebrafish DNA sequence from clone CH211-219H2 in linkage group 18, complete sequence Length = 214825 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 ttgatggcagtctccatgacg 474 ||||||||||||||||||||| Sbjct: 80099 ttgatggcagtctccatgacg 80079
>emb|AL049831.2|CNS00008 Human chromosome 14 DNA sequence BAC R-330O19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 218956 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 218381 acaaagaacaagggcaacaaa 218361
>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome 14 Length = 1071646 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 325535 acaaagaacaagggcaacaaa 325515
>emb|AL132633.2|CNS01DT3 Human chromosome 14 DNA sequence BAC C-2216L14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 120571 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acaaagaacaagggcaacaaa 77 ||||||||||||||||||||| Sbjct: 84606 acaaagaacaagggcaacaaa 84626
>emb|AL807380.6| Mouse DNA sequence from clone RP23-192G18 on chromosome 2, complete sequence Length = 208614 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 caatacacacacgcacgcaca 204 ||||||||||||||||||||| Sbjct: 115829 caatacacacacgcacgcaca 115849
>gb|AC159318.4| Mus musculus BAC clone RP23-76M13 from chromosome 12, complete sequence Length = 269200 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 caatacacacacgcacgcac 203 |||||||||||||||||||| Sbjct: 189116 caatacacacacgcacgcac 189097
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 492 cttctccaggaagcccgccaccca 515 |||||||||||||||| ||||||| Sbjct: 127546 cttctccaggaagccccccaccca 127569
>gb|AC105080.8| Mus musculus chromosome 3, clone RP24-313N2, complete sequence Length = 195212 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aaacaatacacacacgcacgcaca 204 ||||||||||||||| |||||||| Sbjct: 15663 aaacaatacacacacacacgcaca 15686
>gb|AC146317.3| Microcebus murinus clone CH257-477O8, complete sequence Length = 188317 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 154465 caaagaacaagggcaacaaa 154446
>gb|AC149071.3| Xenopus tropicalis BAC clone ISB10250N9 containing the Irx4 gene, complete cds, complete sequence Length = 84437 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 acagcctacaaagaacaagg 69 |||||||||||||||||||| Sbjct: 81809 acagcctacaaagaacaagg 81790
>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230137 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 175454 aatacacacacgcacgcaca 175473
>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on chromosome 15 Length = 755217 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 16730 caaagaacaagggcaacaaa 16711
>gb|AC122551.7| Mus musculus chromosome 16, clone RP24-480I8, complete sequence Length = 190760 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atacacacacgcacgcacat 205 |||||||||||||||||||| Sbjct: 126710 atacacacacgcacgcacat 126729
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 catcacattccatgacacaa 299 |||||||||||||||||||| Sbjct: 4456885 catcacattccatgacacaa 4456904
>emb|BX322603.16| Zebrafish DNA sequence from clone DKEY-269I1 in linkage group 12, complete sequence Length = 191741 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 180386 aatacacacacgcacgcaca 180405
>emb|Z46636.1|PBTHRSEPK P.blakesleeanus pkpA gene for serine/threonine protein kinase Length = 3463 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 490 aatacacacacgcacgcaca 509
>gb|AC117518.3| Homo sapiens X BAC RP13-106B4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170368 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 60184 caaagaacaagggcaacaaa 60165
>emb|CR354429.17| Zebrafish DNA sequence from clone CH211-150F22 in linkage group 25, complete sequence Length = 178425 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atacacacacgcacgcacat 205 |||||||||||||||||||| Sbjct: 78105 atacacacacgcacgcacat 78124
>gb|AY120853.2| Synechococcus sp. PCC 7942 processing protease-like protein gene, partial cds; phycocyanobilin:ferredoxin oxidoreductase-like protein, DevB (devB), DevC (devC), tRNA pseudoridine 55 synthase, CheY (cheY), 50S ribosomal protein L27, 50S ribosomal protein L21, KaiA (kaiA), KaiB (kaiB), KaiC (kaiC), glutathione peroxidase, virulence associated protein C, rRNA methylase-like protein, PhdD (phdD), indole-3-glycerol phosphate synthase-like protein, PdxJ (pdxJ), KguA (kguA), AmpA (ampA), MobA (mobA), transferrin variant A-like protein, 6-pyruvoyl-tetrahydropterin synthase-like protein, NugC (nugC), NdhK (ndhK), Nu3C (nu3C), RubR (rubR), PsbE (psbE), PsbF (psbF), PsbL (psbL), PsbJ (psbJ), apolipoprotein N-acyltransferase-like protein, unknown protein, IspF (ispF), Ap-4-A phosphorylase II-like protein, PanC (panC), Kcy (kcy), and dTDP-glucose 4-6-dehydratase-like protein genes, complete cds; and unknown genes Length = 74355 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 aggccgccgccaccggctgc 390 |||||||||||||||||||| Sbjct: 33915 aggccgccgccaccggctgc 33934
>gb|AC122832.4| Mus musculus BAC clone RP23-179D3 from 12, complete sequence Length = 224056 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 84238 aatacacacacgcacgcaca 84257
>gb|AC115118.3| Mus musculus BAC clone RP23-84N24 from 5, complete sequence Length = 198448 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 142956 aatacacacacgcacgcaca 142975
>gb|AC093856.3| Homo sapiens BAC clone RP11-518I12 from 7, complete sequence Length = 205317 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atacacacacgcacgcacat 205 |||||||||||||||||||| Sbjct: 68298 atacacacacgcacgcacat 68317
>emb|BX649433.4| Zebrafish DNA sequence from clone DKEY-215P16 in linkage group 7, complete sequence Length = 77241 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 27281 aatacacacacgcacgcaca 27300
>emb|AL583852.6| Human DNA sequence from clone RP11-17G2 on chromosome 10, complete sequence Length = 56701 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 22591 aatacacacacgcacgcaca 22610
>emb|AL158053.14| Human DNA sequence from clone RP11-156J23 on chromosome Xq21.2-21.33 Contains a discs, large homolog 7 (Drosophila) (DLG7) pseudogene, complete sequence Length = 177722 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 acaaagaacaagggcaacaa 76 |||||||||||||||||||| Sbjct: 62348 acaaagaacaagggcaacaa 62329
>emb|AL928677.6| Zebrafish DNA sequence from clone BUSM1-70B1 in linkage group 7 Contains a novel gene similar to mouse and rodent CHRNA7 (cholinergic receptor, nicotinic, alpha polypeptide 7), a novel gene and two CpG islands, complete sequence Length = 144076 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 87467 aatacacacacgcacgcaca 87448
>emb|AL596129.27| Mouse DNA sequence from clone RP23-294E23 on chromosome 11 Contains the 3' end of the Myh3 gene for embryonic skeletal muscle myosin heavy polypeptide 3, four novel genes (2310065F04Rik), the Myh2 gene for adult skeletal muscle myosin heavy polypeptide 2, the Myh1 gene for adult skeletal muscle myosin heavy polypeptide 1, the Myh4 gene for skeletal muscle myosin heavy polypeptide 4 and the Myh8 gene for perinatal skeletal muscle myosin heavy polypeptide 8 (4832426G23Rik), complete sequence Length = 221384 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 115133 aatacacacacgcacgcaca 115114
>emb|CR927553.8| Zebrafish DNA sequence from clone DKEY-206P8 in linkage group 17, complete sequence Length = 162064 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 atacacacacgcacgcacat 205 |||||||||||||||||||| Sbjct: 36945 atacacacacgcacgcacat 36926
>gb|AC005145.1| Homo sapiens Xp22-166-169 GSHB-523A23 (Genome Systems Human BAC library) complete sequence Length = 143678 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 95306 caaagaacaagggcaacaaa 95325
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 aggccgccgccaccggctgc 390 |||||||||||||||||||| Sbjct: 1102332 aggccgccgccaccggctgc 1102313
>gb|AC073365.14| Homo sapiens 3 BAC RP11-479M14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179598 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 acacacacgcacgcacatcc 207 |||||||||||||||||||| Sbjct: 110067 acacacacgcacgcacatcc 110086
>gb|AC016820.9| Homo sapiens chromosome 10 clone RP11-31E13, complete sequence Length = 194364 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 20137 aatacacacacgcacgcaca 20156
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 agatcaggccgccgccaccg 385 |||||||||||||||||||| Sbjct: 772422 agatcaggccgccgccaccg 772403
>gb|AC113146.2| Homo sapiens chromosome 15, clone RP11-265N7, complete sequence Length = 178395 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 147169 aatacacacacgcacgcaca 147150
>gb|AC012084.9| Homo sapiens 10 BAC RP11-943E22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167441 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 109058 aatacacacacgcacgcaca 109077
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 aggccgccgccaccggctgc 390 |||||||||||||||||||| Sbjct: 407043 aggccgccgccaccggctgc 407062
>gb|AC013652.8| Homo sapiens chromosome 15, clone RP11-462P6, complete sequence Length = 189761 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 167488 aatacacacacgcacgcaca 167507
>dbj|AK138784.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430068H18 product:unclassifiable, full insert sequence Length = 3815 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 aaacaatacacacacgcacgcaca 204 ||||||||||||||| |||||||| Sbjct: 1237 aaacaatacacacacacacgcaca 1214
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 agtctccatgacgtggcagt 481 |||||||||||||||||||| Sbjct: 4279009 agtctccatgacgtggcagt 4279028
>gb|AC008916.7| Homo sapiens chromosome 5 clone CTD-2271P9, complete sequence Length = 133862 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 caaaactgtgaaacaataca 190 |||||||||||||||||||| Sbjct: 122025 caaaactgtgaaacaataca 122006
>emb|BX855613.7| Zebrafish DNA sequence from clone CH211-208F21 in linkage group 14, complete sequence Length = 201273 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 ttactcgcacaagcatcaca 286 |||||||||||||||||||| Sbjct: 140633 ttactcgcacaagcatcaca 140614
>gb|AC022103.5| Homo sapiens chromosome 5 clone CTC-254B4, complete sequence Length = 129175 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 56328 aatacacacacgcacgcaca 56347
>gb|AC008817.8| Homo sapiens chromosome 5 clone CTD-2122P11, complete sequence Length = 186185 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 129765 aatacacacacgcacgcaca 129746
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 catcacattccatgacacaa 299 |||||||||||||||||||| Sbjct: 4457000 catcacattccatgacacaa 4457019
>gb|AC022841.4|AC022841 Homo sapiens chromosome 15, clone RP11-213C21, complete sequence Length = 157657 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 66486 aatacacacacgcacgcaca 66505
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 catcacattccatgacacaa 299 |||||||||||||||||||| Sbjct: 62177 catcacattccatgacacaa 62196
>gb|AC091657.3| Rattus norvegicus strain Brown Norway clone RP31-29N16, complete sequence Length = 141898 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 caatacacacacgcacgcac 203 |||||||||||||||||||| Sbjct: 84668 caatacacacacgcacgcac 84649
>gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, complete sequence Length = 203244 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 71056 caaagaacaagggcaacaaa 71075
>gb|AC090602.16| Homo sapiens chromosome 15, clone RP11-125E1, complete sequence Length = 174707 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 16730 caaagaacaagggcaacaaa 16711
>gb|AF511334.1| Sus scrofa clone UMNp522 microsatellite sequence Length = 317 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 118 aatacacacacgcacgcaca 137
>gb|AC119800.2| Homo sapiens chromosome 1 clone RP4-630A11, complete sequence Length = 161112 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 55070 caaagaacaagggcaacaaa 55051
>gb|AC174929.1| Mus musculus BAC clone CH25-367I5 from chromosome 3, complete sequence Length = 90189 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aaacaatacacacacgcacgcaca 204 ||||||||||||||| |||||||| Sbjct: 71098 aaacaatacacacacacacgcaca 71121
>gb|AC008959.4|AC008959 Homo sapiens chromosome 5 clone CTD-2354D23, complete sequence Length = 98620 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 caaaactgtgaaacaataca 190 |||||||||||||||||||| Sbjct: 63781 caaaactgtgaaacaataca 63762
>dbj|BS000088.1| Pan troglodytes chromosome 22 clone:RP43-078B15, map 22, complete sequences Length = 198333 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 aaagaacaagggcaacaaaa 78 |||||||||||||||||||| Sbjct: 93337 aaagaacaagggcaacaaaa 93356
>emb|AL672110.10| Mouse DNA sequence from clone RP23-338D24 on chromosome X, complete sequence Length = 167407 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atacacacacgcacgcacat 205 |||||||||||||||||||| Sbjct: 10979 atacacacacgcacgcacat 10998
>dbj|AB073164.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC clone:T2N12 Length = 87081 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ttgctcagctaactcaacca 264 |||||||||||||||||||| Sbjct: 16226 ttgctcagctaactcaacca 16207
>gb|AC000055.1|HSAC000055 Human PAC clone DJ073F11 from Xq23, complete sequence Length = 93578 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 80624 caaagaacaagggcaacaaa 80643
>dbj|AK069314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011A15, full insert sequence Length = 2282 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 catcacattccatgacacaa 299 |||||||||||||||||||| Sbjct: 917 catcacattccatgacacaa 898
>emb|CR954168.11| Zebrafish DNA sequence from clone DKEY-264P5 in linkage group 19, complete sequence Length = 128597 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 94018 aatacacacacgcacgcaca 93999
>emb|CR790375.9| Zebrafish DNA sequence from clone CH211-251O16 in linkage group 4, complete sequence Length = 153499 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 125570 aatacacacacgcacgcaca 125589
>emb|BX255922.4| Zebrafish DNA sequence from clone CH211-125A15 in linkage group 4, complete sequence Length = 155429 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aatacacacacgcacgcaca 204 |||||||||||||||||||| Sbjct: 22373 aatacacacacgcacgcaca 22392
>emb|BX537358.5| Zebrafish DNA sequence from clone DKEY-98L9 in linkage group 4, complete sequence Length = 230105 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 acacacacgcacgcacatcc 207 |||||||||||||||||||| Sbjct: 32784 acacacacgcacgcacatcc 32803
>gb|AY110140.1| Zea mays CL37086_1 mRNA sequence Length = 1140 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 accgtttgcaacttttcttg 587 |||||||||||||||||||| Sbjct: 305 accgtttgcaacttttcttg 324
>emb|CT806410.3| CH251-575K15, complete sequence Length = 155922 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 32668 caaagaacaagggcaacaaa 32649
>emb|CT573089.2| RP43-058A24, complete sequence Length = 216040 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 150966 caaagaacaagggcaacaaa 150985
>gb|AC116763.11| Mus musculus chromosome 5, clone RP23-385G21, complete sequence Length = 196521 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atacacacacgcacgcacat 205 |||||||||||||||||||| Sbjct: 91097 atacacacacgcacgcacat 91116
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caaagaacaagggcaacaaa 77 |||||||||||||||||||| Sbjct: 1285620 caaagaacaagggcaacaaa 1285601
>gb|AC140797.10| Mus musculus chromosome 3, clone RP23-137D8, complete sequence Length = 153333 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 atacacacacgcacgcacat 205 |||||||||||||||||||| Sbjct: 120599 atacacacacgcacgcacat 120580
>gb|AC087242.10| Homo sapiens 12 BAC RP11-361I14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114097 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tgtgaaacaatacacacacgcacg 200 ||||||||||||||||||| |||| Sbjct: 32683 tgtgaaacaatacacacacacacg 32706
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 aggccgccgccaccggctgc 390 |||||||||||||||||||| Sbjct: 1213763 aggccgccgccaccggctgc 1213744
>dbj|D86993.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:23C6 Length = 39752 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 caaaactgtgaaacaataca 190 |||||||||||||||||||| Sbjct: 1724 caaaactgtgaaacaataca 1705
>dbj|D88268.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:47H9 Length = 44553 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 caaaactgtgaaacaataca 190 |||||||||||||||||||| Sbjct: 39117 caaaactgtgaaacaataca 39098
>dbj|D87001.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:47H9 downstream contig Length = 13488 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 caaaactgtgaaacaataca 190 |||||||||||||||||||| Sbjct: 8052 caaaactgtgaaacaataca 8033 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,511,538 Number of Sequences: 3902068 Number of extensions: 4511538 Number of successful extensions: 115232 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114473 Number of HSP's gapped (non-prelim): 759 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)