| Clone Name | rbaal10g23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ICAM1_RAT (Q00238) Intercellular adhesion molecule 1 precursor (... | 25 | 5.5 |
|---|
>ICAM1_RAT (Q00238) Intercellular adhesion molecule 1 precursor (ICAM-1)| Length = 545 Score = 24.6 bits (52), Expect(2) = 5.5 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = -1 Query: 316 ILLRPQRRGGPQLLRHLLIASTAPRPPT 233 + ++ + GG Q++ L+ ST+PRPPT Sbjct: 328 VTVKCEAHGGAQVV---LLNSTSPRPPT 352 Score = 23.9 bits (50), Expect(2) = 5.5 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 Query: 253 TAPRPPTLHVHF*LASLRVAHRR 185 T+PRPPT + F L + H+R Sbjct: 356 TSPRPPTSQIQFTLNASPEDHKR 378 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,690,898 Number of Sequences: 219361 Number of extensions: 919583 Number of successful extensions: 2959 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2838 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2952 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)