ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal10g13 |
|---|---|
| Clone Library Name | barley_pub |
>RL36C_ARATH (Q9LZ57) 60S ribosomal protein L36-3| Length = 108 Score = 138 bits (347), Expect = 1e-32 Identities = 68/80 (85%), Positives = 75/80 (93%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGHVVTKRE PPRP++RKGK +KR F+R+LI+EVAG APYEKRITELLKVGKDKRALK Sbjct: 11 NKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALK 70 Query: 397 VAKRKLGTHKRAKKKREEMS 338 VAKRKLGTHKRAK+KREEMS Sbjct: 71 VAKRKLGTHKRAKRKREEMS 90
>RL36A_ARATH (O80929) 60S ribosomal protein L36-1| Length = 113 Score = 137 bits (346), Expect = 2e-32 Identities = 68/80 (85%), Positives = 73/80 (91%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGHVVT+REL PRP+ RKGK +KR F+R LIREVAG APYEKRITELLKVGKDKRALK Sbjct: 15 NKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALK 74 Query: 397 VAKRKLGTHKRAKKKREEMS 338 VAKRKLGTHKRAK+KREEMS Sbjct: 75 VAKRKLGTHKRAKRKREEMS 94
>RL36B_ARATH (Q9M352) 60S ribosomal protein L36-2| Length = 112 Score = 135 bits (339), Expect = 1e-31 Identities = 67/80 (83%), Positives = 73/80 (91%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGHVVT+REL PRP RKGK +KR F+R+LI+EVAG APYEKRITELLKVGKDKRALK Sbjct: 15 NKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALK 74 Query: 397 VAKRKLGTHKRAKKKREEMS 338 VAKRKLGTHKRAK+KREEMS Sbjct: 75 VAKRKLGTHKRAKRKREEMS 94
>RL36_DAUCA (P52866) 60S ribosomal protein L36| Length = 106 Score = 127 bits (319), Expect = 2e-29 Identities = 62/92 (67%), Positives = 73/92 (79%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGH+VTK+EL PRPSDRKGK +KR HFVR+LIREVAGF PYEKRITELLKVGKDKRALK Sbjct: 15 NKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALK 74 Query: 397 VAKRKLGTHKRAKKKREEMSQCPQEDEICWYW 302 V + K+G + +K++ QC DE W+W Sbjct: 75 VRQEKVGHSQESKEEERGDVQCSPPDE-GWWW 105
>RL36_ENTCP (Q9LRB8) 60S ribosomal protein L36| Length = 101 Score = 113 bits (282), Expect = 4e-25 Identities = 56/80 (70%), Positives = 67/80 (83%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGH VTK+ PRPS RKG ++RV VR+++REVAG+APYE+R+ ELLKVGKDKRALK Sbjct: 9 NKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKRALK 68 Query: 397 VAKRKLGTHKRAKKKREEMS 338 + KRKLGTH R KKKREEM+ Sbjct: 69 MCKRKLGTHMRGKKKREEMA 88
>RL36A_SCHPO (Q92365) 60S ribosomal protein L36-A| Length = 99 Score = 107 bits (266), Expect = 3e-23 Identities = 52/88 (59%), Positives = 69/88 (78%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKG V+TKR+LP RPS RKG+ +KR FVRS++REVAGFAPYE+R+ EL++ +DKRA K Sbjct: 10 NKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARK 69 Query: 397 VAKRKLGTHKRAKKKREEMSQCPQEDEI 314 +AK++LGT KRAK K EE++ Q + Sbjct: 70 LAKKRLGTLKRAKGKIEELTSVIQSSRL 97
>RL36_PONPY (Q5RAZ9) 60S ribosomal protein L36| Length = 104 Score = 105 bits (261), Expect = 1e-22 Identities = 52/80 (65%), Positives = 61/80 (76%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGH VTK PR S R+G+ TK FVR +IREV GFAPYE+R ELLKV KDKRALK Sbjct: 11 NKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALK 70 Query: 397 VAKRKLGTHKRAKKKREEMS 338 K+++GTH RAK+KREE+S Sbjct: 71 FIKKRVGTHIRAKRKREELS 90
>RL36_HUMAN (Q9Y3U8) 60S ribosomal protein L36| Length = 104 Score = 105 bits (261), Expect = 1e-22 Identities = 52/80 (65%), Positives = 61/80 (76%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGH VTK PR S R+G+ TK FVR +IREV GFAPYE+R ELLKV KDKRALK Sbjct: 11 NKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALK 70 Query: 397 VAKRKLGTHKRAKKKREEMS 338 K+++GTH RAK+KREE+S Sbjct: 71 FIKKRVGTHIRAKRKREELS 90
>RL36_BOVIN (Q3T171) 60S ribosomal protein L36| Length = 104 Score = 104 bits (259), Expect = 2e-22 Identities = 52/80 (65%), Positives = 61/80 (76%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGH VTK PR S R+G+ TK FVR +IREV GFAPYE+R ELLKV KDKRALK Sbjct: 11 NKGHKVTKNVGKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALK 70 Query: 397 VAKRKLGTHKRAKKKREEMS 338 K+++GTH RAK+KREE+S Sbjct: 71 FIKKRVGTHIRAKRKREELS 90
>RL36B_SCHPO (O94658) 60S ribosomal protein L36-B| Length = 99 Score = 104 bits (259), Expect = 2e-22 Identities = 51/88 (57%), Positives = 67/88 (76%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKG +TKR+LP RPS RKG +KR FVRS++REVAGFAPYE+R+ EL++ +DKRA K Sbjct: 10 NKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQDKRARK 69 Query: 397 VAKRKLGTHKRAKKKREEMSQCPQEDEI 314 +AK++LGT KRAK K EE++ Q + Sbjct: 70 LAKKRLGTLKRAKGKIEELTSVIQSSRL 97
>RL36_RAT (P39032) 60S ribosomal protein L36| Length = 104 Score = 102 bits (255), Expect = 6e-22 Identities = 51/80 (63%), Positives = 60/80 (75%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGH VTK PR S R+G+ TK FVR +IREV FAPYE+R ELLKV KDKRALK Sbjct: 11 NKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKDKRALK 70 Query: 397 VAKRKLGTHKRAKKKREEMS 338 K+++GTH RAK+KREE+S Sbjct: 71 FIKKRVGTHIRAKRKREELS 90
>RL36_MOUSE (P47964) 60S ribosomal protein L36| Length = 104 Score = 98.6 bits (244), Expect = 1e-20 Identities = 49/80 (61%), Positives = 58/80 (72%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGH VTK PR S R+ + T FVR +IREV GFAPYE+R ELLKV K KRALK Sbjct: 11 NKGHKVTKNVSKPRHSRRRSRLTNHTKFVRDMIREVCGFAPYERRAMELLKVSKSKRALK 70 Query: 397 VAKRKLGTHKRAKKKREEMS 338 K+++GTH RAK+KREE+S Sbjct: 71 FIKKRVGTHIRAKRKREELS 90
>RL36_CAEEL (P49181) 60S ribosomal protein L36| Length = 103 Score = 95.5 bits (236), Expect = 1e-19 Identities = 42/79 (53%), Positives = 58/79 (73%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGH T+ + R + KG +K+ VR L+RE+ GFAPYE+R+ E+L++ KDKRALK Sbjct: 13 NKGHAATQLPVKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISKDKRALK 72 Query: 397 VAKRKLGTHKRAKKKREEM 341 KR++GTH+RAK KREE+ Sbjct: 73 FLKRRIGTHRRAKGKREEL 91
>RL36_CANAL (P47834) 60S ribosomal protein L36 (L39)| Length = 99 Score = 92.8 bits (229), Expect = 6e-19 Identities = 44/81 (54%), Positives = 62/81 (76%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKG T +E+ P+ S RKG ++R FVRS+++EVAG APYE+R+ EL++ +KRA K Sbjct: 11 NKGRKTTAKEVAPKISYRKGASSQRTVFVRSIVKEVAGLAPYERRLIELIRNAGEKRAKK 70 Query: 397 VAKRKLGTHKRAKKKREEMSQ 335 +AK++LGTHKRA +K EEM+Q Sbjct: 71 LAKKRLGTHKRALRKVEEMTQ 91
>RL36_TRIHM (Q9HFR7) 60S ribosomal protein L36 (TRP36)| Length = 105 Score = 90.1 bits (222), Expect = 4e-18 Identities = 44/81 (54%), Positives = 59/81 (72%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKGH T R + PR S KG +KR FVR +++EVAG APYE+R+ ELL+ KDKRA K Sbjct: 16 NKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLRNSKDKRARK 75 Query: 397 VAKRKLGTHKRAKKKREEMSQ 335 +AK++LGT RAK+K +E+ + Sbjct: 76 LAKKRLGTFGRAKRKVDELQR 96
>RL36_DROME (P49630) 60S ribosomal protein L36 (Protein minute(1)1B)| Length = 115 Score = 89.4 bits (220), Expect = 7e-18 Identities = 49/90 (54%), Positives = 57/90 (63%), Gaps = 10/90 (11%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKG----------TKRVHFVRSLIREVAGFAPYEKRITELL 428 NKGH +K D+K KG T+ F+R L+REV G APYEKR ELL Sbjct: 12 NKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELL 71 Query: 427 KVGKDKRALKVAKRKLGTHKRAKKKREEMS 338 KV KDKRALK KR+LGTH RAK+KREE+S Sbjct: 72 KVSKDKRALKFLKRRLGTHIRAKRKREELS 101
>RL36B_YEAST (O14455) 60S ribosomal protein L36-B (L39B) (YL39)| Length = 99 Score = 81.6 bits (200), Expect = 1e-15 Identities = 40/80 (50%), Positives = 57/80 (71%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKG VT+ P+ S +KG + R FVRSL+RE+AG +PYE+R+ +L++ +KRA K Sbjct: 11 NKGKKVTQMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARK 70 Query: 397 VAKRKLGTHKRAKKKREEMS 338 VAK++LG+ RAK K EEM+ Sbjct: 71 VAKKRLGSFTRAKAKVEEMN 90
>RL36A_YEAST (P05745) 60S ribosomal protein L36-A (L39A) (YL39)| Length = 99 Score = 81.3 bits (199), Expect = 2e-15 Identities = 40/80 (50%), Positives = 56/80 (70%) Frame = -1 Query: 577 NKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALK 398 NKG VT P+ S +KG + R FVRSL+RE+AG +PYE+R+ +L++ +KRA K Sbjct: 11 NKGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARK 70 Query: 397 VAKRKLGTHKRAKKKREEMS 338 VAK++LG+ RAK K EEM+ Sbjct: 71 VAKKRLGSFTRAKAKVEEMN 90
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6| Length = 249 Score = 33.1 bits (74), Expect = 0.58 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = -1 Query: 460 APYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSQ 335 A Y K + + LK K+KR K+AKR+ + RA + + E SQ Sbjct: 207 AEYAKLLAKRLKEAKEKRQEKIAKRRRLSSLRASQSKSESSQ 248
>ZAN_RABIT (P57999) Zonadhesin (Fragment)| Length = 2282 Score = 30.8 bits (68), Expect = 2.9 Identities = 21/69 (30%), Positives = 24/69 (34%), Gaps = 5/69 (7%) Frame = +1 Query: 235 PPXTXRLPLTSRAWDT---XXXXXXXXXXXXXXPEDTGTS-PLSSSWPSCGCPTFASPPS 402 PP T R LTS T P T S P ++ + SC CP P Sbjct: 461 PPTTARSTLTSLEPTTHTPSTSLTSTTLSTTTTPSPTTVSCPANAHYESCACPASCKHPK 520 Query: 403 EHAY-PCQP 426 PCQP Sbjct: 521 ASCKPPCQP 529
>PRDM2_HUMAN (Q13029) PR domain zinc finger protein 2 (PR domain-containing| protein 2) (Retinoblastoma protein-interacting zinc-finger protein) (Zinc finger protein RIZ) (MTE-binding protein) (MTB-ZF) (GATA-3-binding protein G3B) Length = 1718 Score = 30.8 bits (68), Expect = 2.9 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%) Frame = -1 Query: 436 ELLKVGKDKRALKVAKRK--------LGTHKRAKKKREEMSQCPQEDEICWYWNRE 293 EL K+ +K L K+K L +K AK+K + + C IC Y NRE Sbjct: 1408 ELSKMSSNKLKLNALKKKNQLVQKAILQKNKSAKQKADLKNACESSSHICPYCNRE 1463
>RS6_RAT (P62755) 40S ribosomal protein S6| Length = 249 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -1 Query: 460 APYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSQ 335 A Y K + + +K K+KR ++AKR+ + RA + E SQ Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQ 248
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -1 Query: 460 APYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSQ 335 A Y K + + +K K+KR ++AKR+ + RA + E SQ Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQ 248
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -1 Query: 460 APYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSQ 335 A Y K + + +K K+KR ++AKR+ + RA + E SQ Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQ 248
>RS6_CHICK (P47838) 40S ribosomal protein S6| Length = 249 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -1 Query: 460 APYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSQ 335 A Y K + + +K K+KR ++AKR+ + RA + E SQ Sbjct: 207 ADYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQ 248
>RFCL_METJA (Q58294) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 516 Score = 30.0 bits (66), Expect = 4.9 Identities = 18/57 (31%), Positives = 33/57 (57%) Frame = -1 Query: 451 EKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSQCPQEDEICWYWNREEEVE 281 +K +E+LK+ K+K+ L+ K+K +KK+EE ++ Q + I +EEV+ Sbjct: 402 DKLASEILKILKEKKKLERKKKKEKEKLEKEKKKEEKAKEKQSNLIIQPKEIKEEVK 458
>NONA_DROME (Q04047) Protein no-on-transient A (Puff-specific protein Bj6)| Length = 700 Score = 29.6 bits (65), Expect = 6.4 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Frame = -1 Query: 463 FAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK-----KKREEMSQCPQEDEICWYWN 299 +A YE+ TELL+ KR + ++KL R K +KREE + + E+ + N Sbjct: 531 YARYEQE-TELLRQELRKREVDNERKKLEWEMREKQAEEMRKREEETMRRHQTEMQSHMN 589 Query: 298 REEE 287 R+EE Sbjct: 590 RQEE 593
>SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (mSART-3) (Tumor-rejection antigen SART3) Length = 962 Score = 29.3 bits (64), Expect = 8.4 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -1 Query: 478 REVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSQCPQEDE 317 +E A E++ + KV +K+ALK K+ G KR + + EE +E+E Sbjct: 587 KEAALVQQEEEKAEQRKKVRAEKKALKKKKKTRGADKRREDEDEENEWGEEEEE 640
>RMT2_NEUCR (Q7SCW9) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 429 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Frame = +1 Query: 223 SKNWPPXTXRLPLTSRAWDTXXXXXXXXXXXXXXPED--TGTSPLSSSWPSCGCPTFASP 396 S++ PP R+ + A D +D TG SPL ++ SCG P+ Sbjct: 12 SEDCPPEIQRMLTAAWAHDVDTVKKLIDTPEVARGQDPKTGESPLHAAIRSCGAPSEDDT 71 Query: 397 PSEH 408 P +H Sbjct: 72 PEDH 75
>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 8.4 Identities = 21/75 (28%), Positives = 35/75 (46%) Frame = -1 Query: 541 PRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRA 362 PRP+DR G + +L R ++ +V + RA++ AKR+ R Sbjct: 138 PRPADRSGM------VLNTLSRSEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARR 191 Query: 361 KKKREEMSQCPQEDE 317 K+REE ++ E+E Sbjct: 192 AKEREESARRQAEEE 206
>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 8.4 Identities = 21/75 (28%), Positives = 35/75 (46%) Frame = -1 Query: 541 PRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRA 362 PRP+DR G + +L R ++ +V + RA++ AKR+ R Sbjct: 138 PRPADRSGM------VLNTLSRSEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARR 191 Query: 361 KKKREEMSQCPQEDE 317 K+REE ++ E+E Sbjct: 192 AKEREESARRQAEEE 206
>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 8.4 Identities = 21/75 (28%), Positives = 35/75 (46%) Frame = -1 Query: 541 PRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRA 362 PRP+DR G + +L R ++ +V + RA++ AKR+ R Sbjct: 138 PRPADRSGM------VLNTLSRSEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARR 191 Query: 361 KKKREEMSQCPQEDE 317 K+REE ++ E+E Sbjct: 192 AKEREESARRQAEEE 206
>TOP1_YEAST (P04786) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Maintenance of killer protein 1) Length = 769 Score = 29.3 bits (64), Expect = 8.4 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Frame = -1 Query: 427 KVGKDKRALKVAKRKLGTHKRAKKKREEMSQ----CPQEDEICWYWNREEEVEYPKLVKL 260 K+ K+ +KV K + KKKREE + +E+E +W +E E + K V L Sbjct: 89 KIKKEDGDVKVKTTKKEEQENEKKKREEEEEEDKKAKEEEEEYKWWEKENEDDTIKWVTL 148
>RPC7_MOUSE (Q6NXY9) DNA-directed RNA polymerase III 32 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase III C32 subunit) Length = 223 Score = 29.3 bits (64), Expect = 8.4 Identities = 22/91 (24%), Positives = 42/91 (46%) Frame = -1 Query: 553 RELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGT 374 RE+ PR +KG + + + A K I EL K G+ +R+ + + K G+ Sbjct: 109 REMMPRKKCKKGDPKSKPSKAAAKATSLINSADVLKTIEELEKRGEGERSDEENEEKEGS 168 Query: 373 HKRAKKKREEMSQCPQEDEICWYWNREEEVE 281 ++ K E+ + ++++ Y E+E E Sbjct: 169 KEKDKDDEEDGEEDAEQED---YDEEEQEEE 196 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,468,285 Number of Sequences: 219361 Number of extensions: 1179559 Number of successful extensions: 3789 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3616 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3770 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
