| Clone Name | rbaal10g10 |
|---|---|
| Clone Library Name | barley_pub |
>TGFA_RAT (P01134) Transforming growth factor alpha precursor (TGF-alpha)| (EGF-like TGF) (ETGF) (TGF type 1) Length = 159 Score = 31.6 bits (70), Expect = 0.48 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -3 Query: 231 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKXCXVR 61 C+ H G++ R HA LL+ S K A V++SIVA + IITC L+ C VR Sbjct: 70 CVCHSGYVGVRCEHADLLAVVAASQKKQAITALVVVSIVALAVL---IITCVLIHCCQVR 126
>TGFA_MACMU (P55244) Transforming growth factor alpha precursor (TGF-alpha)| (EGF-like TGF) (ETGF) (TGF type 1) (Fragment) Length = 121 Score = 31.2 bits (69), Expect = 0.63 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -3 Query: 231 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKXCXVR 61 C+ H G++ R HA LL+ S K A V++SIVA + IITC L+ C VR Sbjct: 48 CVCHSGYVGARCEHADLLAVVAASQKKQAITALVVVSIVALAVL---IITCVLIHCCQVR 104
>TGFA_PIG (Q06922) Transforming growth factor alpha precursor (TGF-alpha)| (EGF-like TGF) (ETGF) (TGF type 1) Length = 160 Score = 31.2 bits (69), Expect = 0.63 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -3 Query: 231 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKXCXVR 61 C+ H G++ R HA LL+ S K A V++SIVA + IITC L+ C VR Sbjct: 71 CVCHSGYVGARCEHADLLAVVAASQKKQAITALVVVSIVALAVL---IITCVLIHCCQVR 127
>TGFA_HUMAN (P01135) Transforming growth factor alpha precursor (TGF-alpha)| (EGF-like TGF) (ETGF) (TGF type 1) Length = 160 Score = 31.2 bits (69), Expect = 0.63 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -3 Query: 231 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKXCXVR 61 C+ H G++ R HA LL+ S K A V++SIVA + IITC L+ C VR Sbjct: 71 CVCHSGYVGARCEHADLLAVVAASQKKQAITALVVVSIVALAVL---IITCVLIHCCQVR 127
>CRIS2_MOUSE (P16563) Cysteine-rich secretory protein 2 precursor (CRISP-2)| (Testis-specific protein TPX-1) Length = 243 Score = 30.8 bits (68), Expect = 0.82 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -2 Query: 277 CKQPFCEHSCSMRSLVHHAWVLKIPTCCXAELNKTECKISDL 152 C+ C +SC L+ + LK C EL KT+C+ + L Sbjct: 196 CENGLCTNSCDFEDLLSNCESLKTSAGCKHELLKTKCQATCL 237
>TGFA_MOUSE (P48030) Transforming growth factor alpha precursor (TGF-alpha)| (EGF-like TGF) (ETGF) (TGF type 1) Length = 159 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -3 Query: 231 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKXCXVR 61 C+ H G++ R HA LL+ S K A V++SIVA + IITC L+ C +R Sbjct: 70 CVCHSGYVGVRCEHADLLAVVAASQKKQAITALVVVSIVALAVL---IITCVLIHCCQLR 126
>TGFA_SHEEP (P98135) Transforming growth factor alpha precursor (TGF-alpha)| (EGF-like TGF) (ETGF) (TGF type 1) (Fragment) Length = 133 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -3 Query: 231 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKXCXVR 61 C+ H G++ R HA LL+ S K A V+++IVA + IITC L+ C VR Sbjct: 70 CVCHSGYVGARCEHADLLAVVAASQKKQAITALVVVTIVALAVL---IITCVLIHCCEVR 126
>KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-associated| protein 10.2) (High sulfur keratin-associated protein 10.2) (Keratin-associated protein 18-2) (Keratin-associated protein 18.2) Length = 255 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = -2 Query: 277 CKQPFCEHSCSMRSLVHHAWVLKIPTCCXAELNKTECKISDLGCCSTYEHSC 122 C+Q C+ +C S + ++P CC A C S CC + SC Sbjct: 121 CQQSSCQPACCASSSCQQS--CRVPVCCKAVCCVPTCSESSSSCCQ--QSSC 168
>CRIS2_HUMAN (P16562) Cysteine-rich secretory protein 2 precursor (CRISP-2)| (Testis-specific protein TPX-1) Length = 243 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -2 Query: 280 ECKQPFCEHSCSMRSLVHHAWVLKIPTCCXAELNKTECKISDL 152 +C + C +SC + L+ + LK C EL K +CK + L Sbjct: 195 DCDKGLCTNSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCL 237
>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated| protein 10.4) (High sulfur keratin-associated protein 10.4) (Keratin-associated protein 18-4) (Keratin-associated protein 18.4) Length = 401 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/52 (28%), Positives = 20/52 (38%) Frame = -2 Query: 277 CKQPFCEHSCSMRSLVHHAWVLKIPTCCXAELNKTECKISDLGCCSTYEHSC 122 C+Q C+ +C S A +P CC K C CC + SC Sbjct: 209 CQQSSCQPACCTSSSCQQACC--VPVCCKTVCCKPVCSEDSSSCCQ--QSSC 256
>VCAP_EHV1V (Q6S6S9) Major capsid protein (MCP) (Capsid protein VP5)| Length = 1376 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/66 (28%), Positives = 26/66 (39%) Frame = +2 Query: 44 CTPVLHRTXXLLTR*QVIMWDQIEY*ATMLISTAAAQVTDFTLGLVQLSXAACRNFKNPC 223 C P+LHR R Q + D ++Y A + A + LV N +NP Sbjct: 739 CDPILHRADMGRARAQELWVDGVDYAAIPWVEMAEVNFGNTGGHLVHNRPIRGENKRNPI 798 Query: 224 VMHQRP 241 V H P Sbjct: 799 VPHHDP 804
>VCAP_EHV1B (P28920) Major capsid protein (MCP) (Capsid protein VP5)| Length = 1376 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/66 (28%), Positives = 26/66 (39%) Frame = +2 Query: 44 CTPVLHRTXXLLTR*QVIMWDQIEY*ATMLISTAAAQVTDFTLGLVQLSXAACRNFKNPC 223 C P+LHR R Q + D ++Y A + A + LV N +NP Sbjct: 739 CDPILHRADMGRARAQELWVDGVDYAAIPWVEMAEVNFGNTGGHLVHNRPIRGENKRNPI 798 Query: 224 VMHQRP 241 V H P Sbjct: 799 VPHHDP 804
>OR2B2_HUMAN (Q9GZK3) Olfactory receptor 2B2 (Olfactory receptor 6-1) (OR6-1)| (Hs6M1-10) Length = 357 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Frame = -2 Query: 313 PLYDSHLLNRTECKQPFCEHSCS--MRSLVHHAWVLKIPTCCXAELNKTECKIS---DLG 149 PL+ S ++++ C Q S S++ W LK+P C E++ C++ L Sbjct: 129 PLHYSIIMHQRLCFQLAAASWISGFSNSVLQSTWTLKMPLCGHKEVDHFFCEVPALLKLS 188 Query: 148 CCSTYEHSCSILYLVPHYYLL 86 C T + + ++ + L+ Sbjct: 189 CVDTTANEAELFFISVLFLLI 209
>MCATL_HUMAN (Q8N8R3) Mitchondrial carnitine/acylcarnitine carrier protein CACL| (CACT-like) (Solute carrier family 25 member 29) Length = 303 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -2 Query: 223 AWVLKIPTCCXAELNKTECKISDLGCCSTYEHSCSIL 113 A ++ CC EL KT ++ D G TY+ S L Sbjct: 102 AGAIQCVICCPMELAKTRLQLQDAGPARTYKGSLDCL 138
>YIGM_ECOLI (P0ADP5) Hypothetical membrane protein yigM| Length = 299 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +2 Query: 146 AAQVTDFTLGLVQLSXAACRNFKNPCVMHQRPH*ATMLTKGLLTL 280 A QV TLG++ N + HQ+PH T +T L+ L Sbjct: 226 ATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVIL 270
>YIGM_ECO57 (P0ADP6) Hypothetical membrane protein yigM| Length = 299 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +2 Query: 146 AAQVTDFTLGLVQLSXAACRNFKNPCVMHQRPH*ATMLTKGLLTL 280 A QV TLG++ N + HQ+PH T +T L+ L Sbjct: 226 ATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVIL 270
>CRIS3_HORSE (O19010) Cysteine-rich secretory protein 3 precursor (CRISP-3)| Length = 245 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = -2 Query: 277 CKQPFCEHSCSMRSLVHHAWVLKIPTCCXAELNKTECK 164 C C +SC LV + LK C EL K CK Sbjct: 198 CDNGLCTNSCEYEDLVSNCDSLKKIAGCEHELLKENCK 235
>YXCE_BACSU (P46335) Hypothetical protein yxcE| Length = 216 Score = 27.3 bits (59), Expect = 9.1 Identities = 22/101 (21%), Positives = 44/101 (43%) Frame = +1 Query: 40 ILYACLASDXTXFN*ITSNNVGPNRVLSNYAHKYCSSPSH*FYTRSCSAQQXSMSEF*EP 219 +L S F+ +S++ S+Y+ Y SSP + + S S+ + S + Sbjct: 18 VLLPSTISHAKSFSGRSSSSYSSRSSSSSYSGSYKSSPKSSYSSGSSSSSKKSKTS---- 73 Query: 220 MRDAPATALSNYAHKRVAYTRSCSAGGNHTMATGKKTGQEY 342 + + +L ++ + + S + G + AT K TG+ Y Sbjct: 74 DDSSSSISLKKKPSEKASSSSSKKSSGTFSGATSKVTGKTY 114
>OR2A5_HUMAN (Q96R48) Olfactory receptor 2A5 (Olfactory receptor 7-138/7-141)| (OR7-138) (OR7-141) Length = 311 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = -2 Query: 247 SMRSLVHHAWVLKIPTCCXAELNKTECKISD---LGCCSTY 134 S+ +LVH +L++P C E+N C+I L C T+ Sbjct: 153 SLLALVHVVLILRLPFCGPHEINHFFCEILSVLKLACADTW 193 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,815,894 Number of Sequences: 219361 Number of extensions: 1020706 Number of successful extensions: 2265 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2206 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2264 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)