| Clone Name | rbaal10f07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463026.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.2 mRNA Length = 1115 Score = 305 bits (154), Expect = 7e-80 Identities = 216/238 (90%) Strand = Plus / Minus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 313 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 802 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 743 Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 742 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 683 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 682 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 623 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgccaagcttctgaggaaata 491 || |||||||| ||||||||||| || || || |||||||||||||| || ||||||| Sbjct: 622 gtctttacaacctccttgaagtttggcgggaatggtgtgccaagcttttggggaaata 565
>dbj|AK104547.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C06, full insert sequence Length = 1065 Score = 305 bits (154), Expect = 7e-80 Identities = 216/238 (90%) Strand = Plus / Minus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 313 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 742 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 683 Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 682 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 623 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 622 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 563 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgccaagcttctgaggaaata 491 || |||||||| ||||||||||| || || || |||||||||||||| || ||||||| Sbjct: 562 gtctttacaacctccttgaagtttggcgggaatggtgtgccaagcttttggggaaata 505
>dbj|AK099558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034B14, full insert sequence Length = 1071 Score = 305 bits (154), Expect = 7e-80 Identities = 216/238 (90%) Strand = Plus / Minus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 313 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 759 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 700 Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 699 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 640 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 639 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 580 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgccaagcttctgaggaaata 491 || |||||||| ||||||||||| || || || |||||||||||||| || ||||||| Sbjct: 579 gtctttacaacctccttgaagtttggcgggaatggtgtgccaagcttttggggaaata 522
>dbj|AK098953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058M06, full insert sequence Length = 1039 Score = 305 bits (154), Expect = 7e-80 Identities = 216/238 (90%) Strand = Plus / Minus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 313 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 752 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 693 Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 692 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 633 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 632 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 573 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgccaagcttctgaggaaata 491 || |||||||| ||||||||||| || || || |||||||||||||| || ||||||| Sbjct: 572 gtctttacaacctccttgaagtttggcgggaatggtgtgccaagcttttggggaaata 515
>dbj|AK061735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D08, full insert sequence Length = 1072 Score = 305 bits (154), Expect = 7e-80 Identities = 216/238 (90%) Strand = Plus / Minus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 313 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 746 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 687 Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 686 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 627 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 626 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 567 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgccaagcttctgaggaaata 491 || |||||||| ||||||||||| || || || |||||||||||||| || ||||||| Sbjct: 566 gtctttacaacctccttgaagtttggcgggaatggtgtgccaagcttttggggaaata 509
>ref|XM_480217.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 280 bits (141), Expect = 4e-72 Identities = 200/221 (90%) Strand = Plus / Minus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 313 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 410 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 351 Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 350 gtaaacagaatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 291 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 |||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 290 atcttctgaaaactggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 231 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgcc 474 || |||||||| ||||||||||| || || || |||||||| Sbjct: 230 gtctttacaacctccttgaagtttggcgggaatggtgtgcc 190
>gb|BT016208.1| Zea mays clone Contig41 mRNA sequence Length = 1041 Score = 254 bits (128), Expect = 2e-64 Identities = 229/264 (86%) Strand = Plus / Plus Query: 233 tctcagtagggaacgatgattgattcgatgagctcctggagaggagccagctctttcttg 292 |||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 235 tctcagtaaggaacgatgatggattcaatgagctcctggagtggagccagctccttcttg 294 Query: 293 tcaatcagcccaaattcgttcgtaaacagaatgaantgcttgaagcangtgttaagatga 352 |||||||| ||||| || || |||||||||||||| |||||||| || || || ||||| Sbjct: 295 tcaatcaggccaaactcatttgtaaacagaatgaagtgcttgaaacaggtattgagatgg 354 Query: 353 gcctnttccttgaggctgacaatcttctgaaaatgggaatggtatatgtgggcataaaca 412 |||| || || ||||| ||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 355 gcctcctctttaaggctaacaatcttctggaaatgcgagtggtatatgtgggcataaaca 414 Query: 413 cgaaacaagcgcttgaaaattgtgtttacaacatccttgaagttgggtggaaanggtgtg 472 ||||||||||||||||| || || || || || ||||||||||| ||||| || |||||| Sbjct: 415 cgaaacaagcgcttgaatatcgtcttcactacttccttgaagtttggtgggaatggtgtg 474 Query: 473 ccaagcttctgaggaaataaggat 496 ||||| || |||||||||| |||| Sbjct: 475 ccaagtttttgaggaaatatggat 498
>gb|AY104572.1| Zea mays PCO087857 mRNA sequence Length = 1332 Score = 254 bits (128), Expect = 2e-64 Identities = 229/264 (86%) Strand = Plus / Minus Query: 233 tctcagtagggaacgatgattgattcgatgagctcctggagaggagccagctctttcttg 292 |||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 866 tctcagtaaggaacgatgatggattcaatgagctcctggagtggagccagctccttcttg 807 Query: 293 tcaatcagcccaaattcgttcgtaaacagaatgaantgcttgaagcangtgttaagatga 352 |||||||| ||||| || || |||||||||||||| |||||||| || || || ||||| Sbjct: 806 tcaatcaggccaaactcatttgtaaacagaatgaagtgcttgaaacaggtattgagatgg 747 Query: 353 gcctnttccttgaggctgacaatcttctgaaaatgggaatggtatatgtgggcataaaca 412 |||| || || ||||| ||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 746 gcctcctctttaaggctaacaatcttctggaaatgcgagtggtatatgtgggcataaaca 687 Query: 413 cgaaacaagcgcttgaaaattgtgtttacaacatccttgaagttgggtggaaanggtgtg 472 ||||||||||||||||| || || || || || ||||||||||| ||||| || |||||| Sbjct: 686 cgaaacaagcgcttgaatatcgtcttcactacttccttgaagtttggtgggaatggtgtg 627 Query: 473 ccaagcttctgaggaaataaggat 496 ||||| || |||||||||| |||| Sbjct: 626 ccaagtttttgaggaaatatggat 603
>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete sequence Length = 167239 Score = 216 bits (109), Expect = 5e-53 Identities = 147/161 (91%) Strand = Plus / Plus Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 165629 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 165688 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 165689 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 165748 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgcc 474 || |||||||| ||||||||||| || || || |||||||| Sbjct: 165749 gtctttacaacctccttgaagtttggcgggaatggtgtgcc 165789 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 309 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 165434 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 165489
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 216 bits (109), Expect = 5e-53 Identities = 147/161 (91%) Strand = Plus / Minus Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 20919649 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 20919590 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 20919589 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 20919530 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgcc 474 || |||||||| ||||||||||| || || || |||||||| Sbjct: 20919529 gtctttacaacctccttgaagtttggcgggaatggtgtgcc 20919489 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 309 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 20919844 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 20919789 Score = 44.1 bits (22), Expect = 0.43 Identities = 62/76 (81%) Strand = Plus / Plus Query: 329 tgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaaaatgg 388 ||||||||||| ||| | ||||| |||| |||||||| ||| ||| |||||||||| Sbjct: 16669458 tgcttgaagcaagtgctgagatgggcctcctccttgagcttgaggatcatctgaaaatgc 16669517 Query: 389 gaatggtatatgtggg 404 || ||||| ||||||| Sbjct: 16669518 gagtggtacatgtggg 16669533
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 216 bits (109), Expect = 5e-53 Identities = 147/161 (91%) Strand = Plus / Minus Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 20912678 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 20912619 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 20912618 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 20912559 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgcc 474 || |||||||| ||||||||||| || || || |||||||| Sbjct: 20912558 gtctttacaacctccttgaagtttggcgggaatggtgtgcc 20912518 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 309 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 20912873 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 20912818 Score = 44.1 bits (22), Expect = 0.43 Identities = 62/76 (81%) Strand = Plus / Plus Query: 329 tgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaaaatgg 388 ||||||||||| ||| | ||||| |||| |||||||| ||| ||| |||||||||| Sbjct: 16663091 tgcttgaagcaagtgctgagatgggcctcctccttgagcttgaggatcatctgaaaatgc 16663150 Query: 389 gaatggtatatgtggg 404 || ||||| ||||||| Sbjct: 16663151 gagtggtacatgtggg 16663166
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12 map MAP_LOC, complete sequence Length = 167323 Score = 216 bits (109), Expect = 5e-53 Identities = 147/161 (91%) Strand = Plus / Plus Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 3274 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 3333 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 3334 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 3393 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgcc 474 || |||||||| ||||||||||| || || || |||||||| Sbjct: 3394 gtctttacaacctccttgaagtttggcgggaatggtgtgcc 3434 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 309 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 3079 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 3134
>gb|BT017985.1| Zea mays clone EL01N0525F07.c mRNA sequence Length = 1171 Score = 208 bits (105), Expect = 1e-50 Identities = 224/265 (84%) Strand = Plus / Minus Query: 232 ttctcagtagggaacgatgattgattcgatgagctcctggagaggagccagctctttctt 291 ||||||||| ||||||| ||| ||||| ||||||||||| || ||||||||||| || || Sbjct: 941 ttctcagtaaggaacgaagatggattccatgagctcctgaaggggagccagctccttttt 882 Query: 292 gtcaatcagcccaaattcgttcgtaaacagaatgaantgcttgaagcangtgttaagatg 351 ||||||||| ||||| || || |||||||||||||| |||||||| || || || ||||| Sbjct: 881 gtcaatcaggccaaactcatttgtaaacagaatgaagtgcttgaaacaggtattgagatg 822 Query: 352 agcctnttccttgaggctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 411 |||| || || ||||| ||||||||||| |||||||| ||||| | |||||||| || Sbjct: 821 ggcctcctctttaaggctaacaatcttctggaaatgggagtggtaggtatgggcatagac 762 Query: 412 acgaaacaagcgcttgaaaattgtgtttacaacatccttgaagttgggtggaaanggtgt 471 |||||||| |||||||| ||||| ||||| || ||||||||||| |||||||| || || Sbjct: 761 ccgaaacaatcgcttgaatattgtatttactacttccttgaagttcggtggaaatggcgt 702 Query: 472 gccaagcttctgaggaaataaggat 496 |||||| || |||||||||| |||| Sbjct: 701 gccaagtttttgaggaaatatggat 677
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 208 bits (105), Expect = 1e-50 Identities = 146/161 (90%) Strand = Plus / Minus Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 3720907 gtaaacagaatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 3720848 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 |||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 3720847 atcttctgaaaactggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 3720788 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgcc 474 || |||||||| ||||||||||| || || || |||||||| Sbjct: 3720787 gtctttacaacctccttgaagtttggcgggaatggtgtgcc 3720747 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 309 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 3721101 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 3721046
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 208 bits (105), Expect = 1e-50 Identities = 146/161 (90%) Strand = Plus / Minus Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 |||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 44404 gtaaacagaatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 44345 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 |||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 44344 atcttctgaaaactggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 44285 Query: 434 gtgtttacaacatccttgaagttgggtggaaanggtgtgcc 474 || |||||||| ||||||||||| || || || |||||||| Sbjct: 44284 gtctttacaacctccttgaagtttggcgggaatggtgtgcc 44244 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 254 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 309 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 44598 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 44543
>gb|BT014231.1| Lycopersicon esculentum clone 133430F, mRNA sequence Length = 959 Score = 121 bits (61), Expect = 2e-24 Identities = 208/257 (80%), Gaps = 1/257 (0%) Strand = Plus / Minus Query: 235 tcagtagggaacgatgattgattcgatgagctcctggagaggagccagctctttcttgtc 294 |||||| || |||||||| ||||| || | ||| || || |||||||| || |||||||| Sbjct: 794 tcagtatgggacgatgatggattctataatctcttgaagtggagccagttccttcttgtc 735 Query: 295 aatcagcccaaattcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagc 354 |||||| ||||| || | || || || ||||| ||||| ||||| || || | ||| || Sbjct: 734 aatcagtccaaactcatg-gtgaagagtatgaaatgcttaaagcacgtattcaaatgggc 676 Query: 355 ctnttccttgaggctgacaatcttctgaaaatgggaatggtatatgtgggcataaacacg 414 || ||||| || || ||||| ||||||||||||||||| || || || ||||| ||||| Sbjct: 675 ctcctccttaagactcacaattttctgaaaatgggaatgataaatatgtgcatacacacg 616 Query: 415 aaacaagcgcttgaaaattgtgtttacaacatccttgaagttgggtggaaanggtgtgcc 474 ||| | ||||| |||||||| || |||||||||||||||||||||||||| || | || Sbjct: 615 aaagagacgcttaaaaattgtcttgacaacatccttgaagttgggtggaaacggcgcacc 556 Query: 475 aagcttctgaggaaata 491 |||| | |||||||||| Sbjct: 555 aagcctttgaggaaata 539
>emb|AJ299394.1|CAR299394 Cicer arietinum partial mRNA for hypothetical protein (ORF), clone Can173-1 Length = 875 Score = 107 bits (54), Expect = 3e-20 Identities = 188/234 (80%) Strand = Plus / Minus Query: 263 agctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttcgtaaacaga 322 ||||| || ||||||||||| || || ||||||||||||||||| || || || || Sbjct: 555 agctcttgaagaggagccagttcctttttgtcaatcagcccaaactcacaagtgaagagt 496 Query: 323 atgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctga 382 || || ||||||||||| ||||| ||||| |||| ||| |||||||| ||||| |||||| Sbjct: 495 ataaaatgcttgaagcatgtgtttagatgggcctcttctttgaggctcacaattttctga 436 Query: 383 aaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaattgtgtttaca 442 || || ||||| || || || ||||| ||||| |||| |||||||| || || || || Sbjct: 435 aagtgagaatgataaatatgagcatatacacggaacagccgcttgaatatcgtcttcacg 376 Query: 443 acatccttgaagttgggtggaaanggtgtgccaagcttctgaggaaataaggat 496 |||||||| |||||||| ||||| || | |||||| ||||||| |||| |||| Sbjct: 375 acatccttaaagttgggaggaaatggagaaccaagcctctgagggaatatggat 322
>ref|NM_123923.3| Arabidopsis thaliana unknown protein AT5G45550 mRNA, complete cds Length = 896 Score = 101 bits (51), Expect = 2e-18 Identities = 135/164 (82%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 702 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 643 Query: 308 tcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgagg 367 || | ||||| || ||||| || |||||||| ||||| |||||||| | ||| || ||| Sbjct: 642 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 583 Query: 368 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 411 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 582 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 539
>gb|AY117158.1| Arabidopsis thaliana unknown protein (At5g45550) mRNA, complete cds Length = 679 Score = 101 bits (51), Expect = 2e-18 Identities = 135/164 (82%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 635 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 576 Query: 308 tcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgagg 367 || | ||||| || ||||| || |||||||| ||||| |||||||| | ||| || ||| Sbjct: 575 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 516 Query: 368 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 411 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 515 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 472
>gb|AY045864.1| Arabidopsis thaliana unknown protein (At5g45550) mRNA, complete cds Length = 911 Score = 101 bits (51), Expect = 2e-18 Identities = 135/164 (82%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 700 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 641 Query: 308 tcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgagg 367 || | ||||| || ||||| || |||||||| ||||| |||||||| | ||| || ||| Sbjct: 640 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 581 Query: 368 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 411 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 580 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 537
>dbj|AK222194.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL24-23-A15 Length = 555 Score = 101 bits (51), Expect = 2e-18 Identities = 135/164 (82%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 277 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 218 Query: 308 tcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgagg 367 || | ||||| || ||||| || |||||||| ||||| |||||||| | ||| || ||| Sbjct: 217 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 158 Query: 368 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 411 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 157 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 114
>emb|BX832788.1|CNS09Z5E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 865 Score = 101 bits (51), Expect = 2e-18 Identities = 135/164 (82%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 670 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 611 Query: 308 tcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgagg 367 || | ||||| || ||||| || |||||||| ||||| |||||||| | ||| || ||| Sbjct: 610 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 551 Query: 368 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 411 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 550 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 507
>gb|AY086730.1| Arabidopsis thaliana clone 27099 mRNA, complete sequence Length = 883 Score = 101 bits (51), Expect = 2e-18 Identities = 135/164 (82%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 700 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 641 Query: 308 tcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgagg 367 || | ||||| || ||||| || |||||||| ||||| |||||||| | ||| || ||| Sbjct: 640 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 581 Query: 368 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 411 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 580 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 537
>emb|AJ920380.1| Poa pratensis partial mRNA for Mob1-like protein (mob1 gene) Length = 654 Score = 93.7 bits (47), Expect = 5e-16 Identities = 102/121 (84%) Strand = Plus / Minus Query: 329 tgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaaaatgg 388 ||||||||||| ||||||||||| || | ||||||||||||||||||||| |||||||| Sbjct: 560 tgcttgaagcatgtgttaagatgggcttcttccttgaggctgacaatcttttgaaaatgc 501 Query: 389 gaatggtatatgtgggcataaacacgaaacaagcgcttgaaaattgtgtttacaacatcc 448 | || || || || |||||||||||||| | |||||||| ||||| || ||||| ||| Sbjct: 500 gtgtgataaatatgagcataaacacgaaaaagccgcttgaatattgtcttcacaacttcc 441 Query: 449 t 449 | Sbjct: 440 t 440
>ref|NM_196336.1| Oryza sativa (japonica cultivar-group) putative F-box protein family (OSJNAa0011L09.13), mRNA Length = 3459 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/106 (84%) Strand = Plus / Minus Query: 324 tgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaa 383 |||| ||||||||||| |||||||| || || | |||||||||||| ||||||||||||| Sbjct: 3370 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 3311 Query: 384 aatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaa 429 |||| | ||||| || || ||||||||||| || | ||||||||| Sbjct: 3310 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 3265
>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0011L09, complete sequence Length = 121055 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/106 (84%) Strand = Plus / Plus Query: 324 tgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaa 383 |||| ||||||||||| |||||||| || || | |||||||||||| ||||||||||||| Sbjct: 71424 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 71483 Query: 384 aatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaa 429 |||| | ||||| || || ||||||||||| || | ||||||||| Sbjct: 71484 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 71529
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/106 (84%) Strand = Plus / Minus Query: 324 tgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaa 383 |||| ||||||||||| |||||||| || || | |||||||||||| ||||||||||||| Sbjct: 145864 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 145805 Query: 384 aatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaa 429 |||| | ||||| || || ||||||||||| || | ||||||||| Sbjct: 145804 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 145759
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/106 (84%) Strand = Plus / Plus Query: 324 tgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaa 383 |||| ||||||||||| |||||||| || || | |||||||||||| ||||||||||||| Sbjct: 12774985 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 12775044 Query: 384 aatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaa 429 |||| | ||||| || || ||||||||||| || | ||||||||| Sbjct: 12775045 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 12775090
>dbj|AK120220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041G09, full insert sequence Length = 1123 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/106 (84%) Strand = Plus / Minus Query: 324 tgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaa 383 |||| ||||||||||| |||||||| || || | |||||||||||| ||||||||||||| Sbjct: 798 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 739 Query: 384 aatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaa 429 |||| | ||||| || || ||||||||||| || | ||||||||| Sbjct: 738 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 693
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/106 (84%) Strand = Plus / Plus Query: 324 tgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaa 383 |||| ||||||||||| |||||||| || || | |||||||||||| ||||||||||||| Sbjct: 12782326 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 12782385 Query: 384 aatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaa 429 |||| | ||||| || || ||||||||||| || | ||||||||| Sbjct: 12782386 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 12782431
>gb|AY303171.1| Solanum bulbocastanum chromosome 8 clone 177O13, complete sequence Length = 163635 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/143 (81%) Strand = Plus / Plus Query: 323 atgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctga 382 ||||| ||||| ||||| || || | ||| |||| ||||| || || ||||| |||||| Sbjct: 117881 atgaaatgcttaaagcacgtattcaaatgggcctcctccttaagactcacaattttctga 117940 Query: 383 aaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaattgtgtttaca 442 |||||||| || || || || ||||| |||||||| | ||||| |||||||| || ||| Sbjct: 117941 aaatgggagtgataaatatgtgcatacacacgaaagagacgcttaaaaattgtcttgaca 118000 Query: 443 acatccttgaagttgggtggaaa 465 |||||||||||||||| |||||| Sbjct: 118001 acatccttgaagttggatggaaa 118023
>gb|AY303170.1| Solanum bulbocastanum chromosome 8 clone CB3A14, complete sequence Length = 79178 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/143 (81%) Strand = Plus / Minus Query: 323 atgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctga 382 ||||| ||||| ||||| || || | ||| |||| ||||| || || ||||| |||||| Sbjct: 14594 atgaaatgcttaaagcacgtattcaaatgggcctcctccttaagactcacaattttctga 14535 Query: 383 aaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaattgtgtttaca 442 |||||||| || || || || ||||| |||||||| | ||||| |||||||| || ||| Sbjct: 14534 aaatgggagtgataaatatgtgcatacacacgaaagagacgcttaaaaattgtcttgaca 14475 Query: 443 acatccttgaagttgggtggaaa 465 |||||||||||||||| |||||| Sbjct: 14474 acatccttgaagttggatggaaa 14452
>emb|AJ635583.1| Medicago sativa subsp. falcata mob1 gene for Mob1-like protein, exons 1-3, allele mutant Length = 1693 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 371 acaatcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaa 430 ||||||||||||||| | || || || ||||| ||||| ||||| || || |||||||| Sbjct: 1324 acaatcttctgaaaacgtgagtgataaatgtgagcatatacacggaataatcgcttgaat 1265 Query: 431 attgtgtttacaacatccttgaagttgggtggaaa 465 ||||| || |||||||| |||||||||||||||| Sbjct: 1264 attgtcttgacaacatctctgaagttgggtggaaa 1230
>emb|BX834019.1|CNS09ZAI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZD04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 812 Score = 69.9 bits (35), Expect = 8e-09 Identities = 131/164 (79%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| |||||||| || ||||| || || |||||||||| || || |||||| Sbjct: 674 atgatagattctatgagctcttgtagaggcgcgagtactttcttgtctataagtccaaat 615 Query: 308 tcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgagg 367 || | ||||| || ||||| || || ||||| || || |||||||| | ||| || ||| Sbjct: 614 tcatgagtaaagaggatgaagtgtttaaagcaagttttgagatgagcttcttcttttagg 555 Query: 368 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 411 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 554 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 511
>dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC19 Length = 85020 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/98 (82%) Strand = Plus / Minus Query: 314 gtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgaca 373 ||||| || ||||| || |||||||| ||||| |||||||| | ||| || ||||| || Sbjct: 83935 gtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttaggctaacg 83876 Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaac 411 || ||||| ||||| || ||||||||||| |||||||| Sbjct: 83875 attttctggaaatgagagtggtatatgtgagcataaac 83838 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 84233 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 84174 Query: 308 tc 309 || Sbjct: 84173 tc 84172
>ref|NM_118023.1| Arabidopsis thaliana unknown protein AT4G19050 mRNA, complete cds Length = 4218 Score = 63.9 bits (32), Expect = 5e-07 Identities = 190/244 (77%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| ||||| || || |||||||| || |||||||||||||| || |||| Sbjct: 4205 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaatgagaacaaac 4146 Query: 308 tcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgagg 367 || | || || || ||||| || |||||||| ||||| |||||||| | || ||||| Sbjct: 4145 tcatgagtgaagaggatgaagtgtttgaagcaagtgttgagatgagcttcctctttgaga 4086 Query: 368 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttg 427 || || || ||||| ||||| || ||||||||||| || ||||| || || | || || Sbjct: 4085 ctaactattttctggaaatgagagtggtatatgtgtgcgtaaactcggaatagtcgttta 4026 Query: 428 aaaattgtgtttacaacatccttgaagttgggtggaaanggtgtgccaagcttctgagga 487 || ||||| || || || ||||||||||| || ||||| | || ||||| || |||||| Sbjct: 4025 aagattgtcttcaccacttccttgaagtttggaggaaaagctgcaccaagtttttgagga 3966 Query: 488 aata 491 |||| Sbjct: 3965 aata 3962
>gb|BT006214.1| Arabidopsis thaliana At4g19050 gene, complete cds Length = 648 Score = 63.9 bits (32), Expect = 5e-07 Identities = 190/244 (77%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| ||||| || || |||||||| || |||||||||||||| || |||| Sbjct: 635 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaatgagaacaaac 576 Query: 308 tcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgagg 367 || | || || || ||||| || |||||||| ||||| |||||||| | || ||||| Sbjct: 575 tcatgagtgaagaggatgaagtgtttgaagcaagtgttgagatgagcttcctctttgaga 516 Query: 368 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttg 427 || || || ||||| ||||| || ||||||||||| || ||||| || || | || || Sbjct: 515 ctaactattttctggaaatgagagtggtatatgtgtgcgtaaactcggaatagtcgttta 456 Query: 428 aaaattgtgtttacaacatccttgaagttgggtggaaanggtgtgccaagcttctgagga 487 || ||||| || || || ||||||||||| || ||||| | || ||||| || |||||| Sbjct: 455 aagattgtcttcaccacttccttgaagtttggaggaaaagctgcaccaagtttttgagga 396 Query: 488 aata 491 |||| Sbjct: 395 aata 392
>dbj|AK117341.1| Arabidopsis thaliana At4g19050 mRNA for unknown protein, complete cds, clone: RAFL16-90-M13 Length = 945 Score = 63.9 bits (32), Expect = 5e-07 Identities = 190/244 (77%) Strand = Plus / Minus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 307 ||||| ||||| ||||| || || |||||||| || |||||||||||||| || |||| Sbjct: 743 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaatgagaacaaac 684 Query: 308 tcgttcgtaaacagaatgaantgcttgaagcangtgttaagatgagcctnttccttgagg 367 || | || || || ||||| || |||||||| ||||| |||||||| | || ||||| Sbjct: 683 tcatgagtgaagaggatgaagtgtttgaagcaagtgttgagatgagcttcctctttgaga 624 Query: 368 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttg 427 || || || ||||| ||||| || ||||||||||| || ||||| || || | || || Sbjct: 623 ctaactattttctggaaatgagagtggtatatgtgtgcgtaaactcggaatagtcgttta 564 Query: 428 aaaattgtgtttacaacatccttgaagttgggtggaaanggtgtgccaagcttctgagga 487 || ||||| || || || ||||||||||| || ||||| | || ||||| || |||||| Sbjct: 563 aagattgtcttcaccacttccttgaagtttggaggaaaagctgcaccaagtttttgagga 504 Query: 488 aata 491 |||| Sbjct: 503 aata 500
>emb|AM161645.1| Medicago sativa subsp. falcata mRNA for Mob1-like protein (mob1-B gene) Length = 880 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 371 acaatcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaa 430 ||||||||||||||||| || || || ||||| ||||| ||||| || || ||||| || Sbjct: 747 acaatcttctgaaaatgtgagtgataaatgtgagcatatacacggaataatcgcttaaat 688 Query: 431 attgtgtttacaacatccttgaagttgggtggaaa 465 ||||| || |||||||| |||| ||||||||||| Sbjct: 687 attgtcttgacaacatctctgaaattgggtggaaa 653
>gb|BT017780.1| Zea mays clone EL01N0503E06.c mRNA sequence Length = 873 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/79 (83%) Strand = Plus / Minus Query: 324 tgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaa 383 |||| ||||||||||| ||||| ||||| |||| ||||||||| ||||| ||| ||| | Sbjct: 547 tgaagtgcttgaagcaggtgttgagatgcgcctcttccttgagcctgacgatcacctgga 488 Query: 384 aatgggaatggtatatgtg 402 | || || ||||||||||| Sbjct: 487 agtgcgagtggtatatgtg 469
>ref|NM_122050.1| Arabidopsis thaliana unknown protein AT5G20430 mRNA, complete cds Length = 369 Score = 58.0 bits (29), Expect = 3e-05 Identities = 72/87 (82%) Strand = Plus / Minus Query: 334 gaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaaaatgggaatg 393 |||||| ||||| |||||||| | ||| ||||| |||||||||| |||| || ||||| Sbjct: 273 gaagcaagtgttgagatgagcttgttcattgagagtgacaatcttaggaaagtgagaatg 214 Query: 394 gtatatgtgggcataaacacgaaacaa 420 || ||||| ||||| ||||||||||| Sbjct: 213 atagatgtgtgcatagacacgaaacaa 187
>gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8 Length = 70169 Score = 58.0 bits (29), Expect = 3e-05 Identities = 72/87 (82%) Strand = Plus / Minus Query: 334 gaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaaaatgggaatg 393 |||||| ||||| |||||||| | ||| ||||| |||||||||| |||| || ||||| Sbjct: 8133 gaagcaagtgttgagatgagcttgttcattgagagtgacaatcttaggaaagtgagaatg 8074 Query: 394 gtatatgtgggcataaacacgaaacaa 420 || ||||| ||||| ||||||||||| Sbjct: 8073 atagatgtgtgcatagacacgaaacaa 8047
>emb|AJ635582.1| Medicago sativa subsp. falcata mob1 gene for Mob1-like protein, exons 1-3, allele wild-type Length = 1627 Score = 54.0 bits (27), Expect = 4e-04 Identities = 109/137 (79%) Strand = Plus / Minus Query: 329 tgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaaaatgg 388 ||||||||||| || || | ||||| | |||||| | || ||||||||||||||||| Sbjct: 1300 tgcttgaagcaagtattcaagtgagcttcttccttcaaactcacaatcttctgaaaatgt 1241 Query: 389 gaatggtatatgtgggcataaacacgaaacaagcgcttgaaaattgtgtttacaacatcc 448 || || || | ||| ||||| ||||| || || ||||| || ||||| || |||||||| Sbjct: 1240 gagtgataaacgtgagcatatacacggaataatcgcttaaatattgtcttgacaacatct 1181 Query: 449 ttgaagttgggtggaaa 465 |||| ||||||||||| Sbjct: 1180 ctgaaattgggtggaaa 1164
>emb|AJ319713.2|MSA319713 Medicago sativa subsp. falcata mRNA for Mob1-like protein (mob1 gene), allele wild-type Length = 648 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 371 acaatcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaa 430 ||||||||||||||||| || || || | ||| ||||| ||||| || || ||||| || Sbjct: 515 acaatcttctgaaaatgtgagtgataaacgtgagcatatacacggaataatcgcttaaat 456 Query: 431 attgtgtttacaacatccttgaagttgggtggaaa 465 ||||| || |||||||| |||| ||||||||||| Sbjct: 455 attgtcttgacaacatctctgaaattgggtggaaa 421
>gb|BT017967.1| Zea mays clone EL01N0523F09.c mRNA sequence Length = 1093 Score = 48.1 bits (24), Expect = 0.028 Identities = 61/74 (82%) Strand = Plus / Minus Query: 329 tgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaaaatgg 388 ||||||||||| ||||| ||||| || | |||||||| |||| ||| |||| || ||| Sbjct: 731 tgcttgaagcaagtgttgagatgcgcatcctccttgagcttgacgatcatctggaagtgg 672 Query: 389 gaatggtatatgtg 402 || ||||||||||| Sbjct: 671 gagtggtatatgtg 658
>emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 50 Length = 199382 Score = 48.1 bits (24), Expect = 0.028 Identities = 72/89 (80%) Strand = Plus / Plus Query: 323 atgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctga 382 ||||| || |||||||| ||||| |||||||| | || ||||| || || || ||||| Sbjct: 22472 atgaagtgtttgaagcaagtgttgagatgagcttcctctttgagactaactattttctgg 22531 Query: 383 aaatgggaatggtatatgtgggcataaac 411 ||||| || ||||||||||| || ||||| Sbjct: 22532 aaatgagagtggtatatgtgtgcgtaaac 22560 Score = 44.1 bits (22), Expect = 0.43 Identities = 43/50 (86%) Strand = Plus / Plus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaat 297 ||||| ||||| ||||| || || |||||||| || |||||||||||||| Sbjct: 22290 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaat 22339
>emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome 4, BAC clone F13C5 (ESSA project) Length = 119111 Score = 48.1 bits (24), Expect = 0.028 Identities = 72/89 (80%) Strand = Plus / Plus Query: 323 atgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctga 382 ||||| || |||||||| ||||| |||||||| | || ||||| || || || ||||| Sbjct: 103177 atgaagtgtttgaagcaagtgttgagatgagcttcctctttgagactaactattttctgg 103236 Query: 383 aaatgggaatggtatatgtgggcataaac 411 ||||| || ||||||||||| || ||||| Sbjct: 103237 aaatgagagtggtatatgtgtgcgtaaac 103265 Score = 44.1 bits (22), Expect = 0.43 Identities = 43/50 (86%) Strand = Plus / Plus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaat 297 ||||| ||||| ||||| || || |||||||| || |||||||||||||| Sbjct: 102995 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaat 103044
>emb|AL021687.1|ATT18B16 Arabidopsis thaliana DNA chromosome 4, BAC clone T18B16 (ESSA project) Length = 96574 Score = 48.1 bits (24), Expect = 0.028 Identities = 72/89 (80%) Strand = Plus / Plus Query: 323 atgaantgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctga 382 ||||| || |||||||| ||||| |||||||| | || ||||| || || || ||||| Sbjct: 6033 atgaagtgtttgaagcaagtgttgagatgagcttcctctttgagactaactattttctgg 6092 Query: 383 aaatgggaatggtatatgtgggcataaac 411 ||||| || ||||||||||| || ||||| Sbjct: 6093 aaatgagagtggtatatgtgtgcgtaaac 6121 Score = 44.1 bits (22), Expect = 0.43 Identities = 43/50 (86%) Strand = Plus / Plus Query: 248 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaat 297 ||||| ||||| ||||| || || |||||||| || |||||||||||||| Sbjct: 5851 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaat 5900
>ref|XM_468620.1| Oryza sativa (japonica cultivar-group), mRNA Length = 654 Score = 44.1 bits (22), Expect = 0.43 Identities = 62/76 (81%) Strand = Plus / Minus Query: 329 tgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaaaatgg 388 ||||||||||| ||| | ||||| |||| |||||||| ||| ||| |||||||||| Sbjct: 557 tgcttgaagcaagtgctgagatgggcctcctccttgagcttgaggatcatctgaaaatgc 498 Query: 389 gaatggtatatgtggg 404 || ||||| ||||||| Sbjct: 497 gagtggtacatgtggg 482
>gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genomic sequence, complete sequence Length = 129167 Score = 44.1 bits (22), Expect = 0.43 Identities = 62/76 (81%) Strand = Plus / Plus Query: 329 tgcttgaagcangtgttaagatgagcctnttccttgaggctgacaatcttctgaaaatgg 388 ||||||||||| ||| | ||||| |||| |||||||| ||| ||| |||||||||| Sbjct: 20251 tgcttgaagcaagtgctgagatgggcctcctccttgagcttgaggatcatctgaaaatgc 20310 Query: 389 gaatggtatatgtggg 404 || ||||| ||||||| Sbjct: 20311 gagtggtacatgtggg 20326
>dbj|AP006361.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT46P17, TM0137, complete sequence Length = 102271 Score = 44.1 bits (22), Expect = 0.43 Identities = 61/74 (82%) Strand = Plus / Minus Query: 374 atcttctgaaaatgggaatggtatatgtgggcataaacacgaaacaagcgcttgaaaatt 433 |||||||||||||| || || || || || ||||| ||||| || || || ||||||||| Sbjct: 23482 atcttctgaaaatgtgagtgataaatatgagcatatacacggaataatcgtttgaaaatt 23423 Query: 434 gtgtttacaacatc 447 || || |||||||| Sbjct: 23422 gtcttcacaacatc 23409
>gb|BC066567.1| Danio rerio MOB1, Mps One Binder kinase activator-like 1B (yeast), mRNA (cDNA clone MGC:76936 IMAGE:6524831), complete cds Length = 1600 Score = 42.1 bits (21), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 tgcttgaagcangtgttaagatgagcct 356 ||||||||| | |||||||||||||||| Sbjct: 847 tgcttgaaggaggtgttaagatgagcct 820
>gb|BC045979.1| Danio rerio MOB1, Mps One Binder kinase activator-like 1B (yeast), mRNA (cDNA clone MGC:56189 IMAGE:5413687), complete cds Length = 1549 Score = 42.1 bits (21), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 tgcttgaagcangtgttaagatgagcct 356 ||||||||| | |||||||||||||||| Sbjct: 849 tgcttgaaggaggtgttaagatgagcct 822
>ref|NM_199914.1| Danio rerio MOB1, Mps One Binder kinase activator-like 1B (yeast) (mobk1b), mRNA Length = 1549 Score = 42.1 bits (21), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 tgcttgaagcangtgttaagatgagcct 356 ||||||||| | |||||||||||||||| Sbjct: 849 tgcttgaaggaggtgttaagatgagcct 822
>gb|AC160564.2| Pan troglodytes BAC clone CH251-542C24 from chromosome 5, complete sequence Length = 177047 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 aggagccagctctttcttgtc 294 ||||||||||||||||||||| Sbjct: 1131 aggagccagctctttcttgtc 1151
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gaaacaagcgcttgaaaattg 434 ||||||||||||||||||||| Sbjct: 398742 gaaacaagcgcttgaaaattg 398722
>emb|CR925780.8| Zebrafish DNA sequence from clone CH211-112B19 in linkage group 5, complete sequence Length = 166407 Score = 42.1 bits (21), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 tgcttgaagcangtgttaagatgagcct 356 ||||||||| | |||||||||||||||| Sbjct: 118545 tgcttgaaggaggtgttaagatgagcct 118518
>gb|AC091872.3| Homo sapiens chromosome 5 clone CTD-2515M14, complete sequence Length = 40876 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 aggagccagctctttcttgtc 294 ||||||||||||||||||||| Sbjct: 4903 aggagccagctctttcttgtc 4883
>gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33B-33B, BAC clone BACR37P12, complete sequence Length = 181103 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aatgggaatggtatatgtggg 404 ||||||||||||||||||||| Sbjct: 61669 aatgggaatggtatatgtggg 61649
>gb|AC158171.2| Pan troglodytes BAC clone CH251-434I6 from chromosome unknown, complete sequence Length = 184468 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 aggagccagctctttcttgtc 294 ||||||||||||||||||||| Sbjct: 42457 aggagccagctctttcttgtc 42437
>gb|AC027332.4|AC027332 Homo sapiens chromosome 5 clone CTD-2193I13, complete sequence Length = 155150 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 aggagccagctctttcttgtc 294 ||||||||||||||||||||| Sbjct: 12 aggagccagctctttcttgtc 32
>gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43 of 83 of the complete sequence Length = 265341 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aatgggaatggtatatgtggg 404 ||||||||||||||||||||| Sbjct: 96438 aatgggaatggtatatgtggg 96418
>gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, region 33A3-33B2, P1 clones DS06189, DS04362, and DS07071, complete sequence Length = 170056 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 aatgggaatggtatatgtggg 404 ||||||||||||||||||||| Sbjct: 43340 aatgggaatggtatatgtggg 43360
>emb|CR847941.14| Zebrafish DNA sequence from clone CH211-275J6 in linkage group 5, complete sequence Length = 151835 Score = 42.1 bits (21), Expect = 1.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 tgcttgaagcangtgttaagatgagcct 356 ||||||||| | |||||||||||||||| Sbjct: 138525 tgcttgaaggaggtgttaagatgagcct 138498
>emb|AL713920.14| Mouse DNA sequence from clone RP23-330B20 on chromosome X, complete sequence Length = 156186 Score = 42.1 bits (21), Expect = 1.7 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 436 gtttacaacatccttg-aagttgggtgga 463 |||||||||||||||| |||||||||||| Sbjct: 50980 gtttacaacatccttgcaagttgggtgga 51008
>gb|U66061.1| Human germline T-cell receptor beta chain TCRBV17S1A1T, TCRBV2S1, TCRBV10S1P, TCRBV29S1P, TCRBV19S1P, TCRBV15S1, TCRBV11S1A1T, HVB relic, TCRBV28S1P, TCRBV34S1, TCRBV14S1, TCRBV3S1, TCRBV4S1A1T, TRY4, TRY5, TRY6, TRY7, TRY8, TCRBD1, TCRBJ1S1, TCRBJ1S2, TCRBJ1S3, TCRBJ1S4, TCRBJ1S5, TCRBJ1S6, TCRBC1, TCRBD2, TCRBJ2S1, TCRBJ2S2, TCRBJ2S3, TCRBJ2S4, TCRBJ2S5, TCRBJ2S6, TCRBJ2S7, TCRBC2, TCRBV20S1A1N2 genes from bases 452324 to 684973 (section 3 of 3) Length = 232650 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aatcttctgaaaatgggaat 392 |||||||||||||||||||| Sbjct: 73286 aatcttctgaaaatgggaat 73305
>gb|U53337.2| Caenorhabditis elegans cosmid R02E12, complete sequence Length = 39151 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gaggagccagctctttcttg 292 |||||||||||||||||||| Sbjct: 14712 gaggagccagctctttcttg 14693
>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7 Length = 684973 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aatcttctgaaaatgggaat 392 |||||||||||||||||||| Sbjct: 525609 aatcttctgaaaatgggaat 525628
>gb|AC145804.2| Xenopus tropicalis clone CH216-83M4, complete sequence Length = 135836 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 caataagatttgtgccagtaaatt 144 ||||||||||| |||||||||||| Sbjct: 128483 caataagatttttgccagtaaatt 128460
>gb|AC146433.3| Pan troglodytes BAC clone RP43-19C19 from 7, complete sequence Length = 180951 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aatcttctgaaaatgggaat 392 |||||||||||||||||||| Sbjct: 73235 aatcttctgaaaatgggaat 73254
>emb|CR954296.5| Zebrafish DNA sequence from clone DKEY-114K23 in linkage group 8, complete sequence Length = 72443 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 acatccttgaagttgggtgg 462 |||||||||||||||||||| Sbjct: 70144 acatccttgaagttgggtgg 70125
>gb|AC124501.3| Mus musculus BAC clone RP23-412F10 from chromosome 6, complete sequence Length = 210057 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aaacatgcatgttatagcag 28 |||||||||||||||||||| Sbjct: 103031 aaacatgcatgttatagcag 103050
>gb|AF229299.1| Hulsea vestita subsp. parryi internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 645 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 tgaacatgtacaaacaacat 76 |||||||||||||||||||| Sbjct: 28 tgaacatgtacaaacaacat 47
>gb|AF229298.1| Hulsea californica internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 645 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 tgaacatgtacaaacaacat 76 |||||||||||||||||||| Sbjct: 28 tgaacatgtacaaacaacat 47
>emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F13 on chromosome 1p33-34.3 Contains the HEYL gene for hairy/enhancer-of-split related protein with YRPW-like motif, a novel gene, the NT5C1A gene for cytosolic IA 5'-nucleotidase, the HPCAL4 gene for hippocalcin like 4, a novel pseudogene, the 5' end of the PPIE gene for peptidylprolyl isomerase E (cyclophilin E) and six CpG islands, complete sequence Length = 154412 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gctgacaatcttctgaaaat 386 |||||||||||||||||||| Sbjct: 133625 gctgacaatcttctgaaaat 133606
>gb|AC164168.3| Mus musculus 6 BAC RP23-343D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 236103 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aaacatgcatgttatagcag 28 |||||||||||||||||||| Sbjct: 185250 aaacatgcatgttatagcag 185269
>emb|AL935187.13| Zebrafish DNA sequence from clone DKEY-97C7 in linkage group 4 Contains part of the gene for a novel protein similar to vertebrate atrophin-1 interacting protein (AIP1) and a CpG island, complete sequence Length = 263517 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 actagtagtgtacatgtttt 101 |||||||||||||||||||| Sbjct: 77465 actagtagtgtacatgtttt 77484
>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence Length = 162877 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cgatgagctcctggagagga 277 |||||||||||||||||||| Sbjct: 26568 cgatgagctcctggagagga 26587
>gb|AC104640.3| Homo sapiens 3 BAC RP11-809F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181345 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 acatgcatgttatagcagtacaat 34 |||||||||||||||||| ||||| Sbjct: 99820 acatgcatgttatagcagcacaat 99843
>gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complete sequence Length = 173840 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 acatgcatgttatagcagtacaat 34 |||||||||||||||||| ||||| Sbjct: 11206 acatgcatgttatagcagcacaat 11229
>gb|AC068714.9| Homo sapiens chromosome 15 clone RP11-315O8 map 15q15, complete sequence Length = 200690 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 83 ctagtagtgtacatgttttttatgtcaa 110 ||||||||||| |||| ||||||||||| Sbjct: 99573 ctagtagtgtatatgtgttttatgtcaa 99546
>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165306 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 aataagatttgtgccagtaa 141 |||||||||||||||||||| Sbjct: 83022 aataagatttgtgccagtaa 83003
>gb|AC017101.10| Homo sapiens BAC clone RP11-556A11 from 2, complete sequence Length = 195635 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 gaggactcagtagcagccatgttt 206 ||||||||||| |||||||||||| Sbjct: 188260 gaggactcagttgcagccatgttt 188283
>gb|AC138024.2| Homo sapiens chromosome 1 clone RP5-1099E6, complete sequence Length = 163815 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 gaaaatgggaatggtatatgtggg 404 |||||||||| ||||||||||||| Sbjct: 17775 gaaaatgggagtggtatatgtggg 17798
>gb|AC119429.3| Homo sapiens chromosome 1 clone RP4-723P6, complete sequence Length = 115940 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 gaaaatgggaatggtatatgtggg 404 |||||||||| ||||||||||||| Sbjct: 33243 gaaaatgggagtggtatatgtggg 33266
>gb|AF222686.1|AF222686 Homo sapiens chromosome X PAC K6166 map Xp11.23, complete sequence Length = 122181 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatgttatagcagtacaat 34 |||||||||||||||||||| Sbjct: 94008 gcatgttatagcagtacaat 93989
>emb|AL512308.19| Human DNA sequence from clone RP11-164H16 on chromosome 6, complete sequence Length = 107455 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ttgcacaggagaactgctga 59 |||||||||||||||||||| Sbjct: 81195 ttgcacaggagaactgctga 81214
>gb|AC149201.2| Macaca mulatta Try4 (try4) gene, complete cds; trypsinogen (try5) and trypsinogen (try6) pseudogenes, complete sequence; trypsinogen (try7) pseudogene, partial sequence; trypsinogen (try8) pseudogene, complete sequence; try9 (try9) and try10 (try10) genes, complete cds; trypsinogen (try11) pseudogene, complete sequence; try12 (try12), try13 (try13), and try14 (try14) genes, complete cds; trypsinogen (try15) pseudogene, complete sequence; and try16 (try16) gene, complete cds Length = 188583 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aatcttctgaaaatgggaat 392 |||||||||||||||||||| Sbjct: 2264 aatcttctgaaaatgggaat 2283
>emb|AL929282.5| Zebrafish DNA sequence from clone CH211-163L21, complete sequence Length = 131005 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 acatccttgaagttgggtgg 462 |||||||||||||||||||| Sbjct: 81364 acatccttgaagttgggtgg 81345
>gb|M93792.1|HULITS Hulsea algida transcribed spacer sequence of nuclear ribosomal DNA Length = 645 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 tgaacatgtacaaacaacat 76 |||||||||||||||||||| Sbjct: 28 tgaacatgtacaaacaacat 47 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,842,111 Number of Sequences: 3902068 Number of extensions: 3842111 Number of successful extensions: 69810 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 69502 Number of HSP's gapped (non-prelim): 301 length of query: 496 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 474 effective length of database: 17,147,199,772 effective search space: 8127772691928 effective search space used: 8127772691928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)