| Clone Name | rbaal10f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009171.1| Triticum aestivum clone wl1n.pk0105.h9:fis, full insert mRNA sequence Length = 1468 Score = 434 bits (219), Expect = e-118 Identities = 366/415 (88%) Strand = Plus / Minus Query: 147 tctacggggccttgtagtacttggtgggcacgaagggcatcttggtgacgaccgcgtcgt 206 |||||| || |||||||||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 1266 tctacgagggcttgtagtacttggtgggcacgaacggcatcttggtgaccacggcgtcgt 1207 Query: 207 actgcttgccgcggacgaccaccttgaactccgtgccggccttgtgcagcccgttcttca 266 | ||| ||||| ||||||||||| |||||||| || |||||||||| || ||||| Sbjct: 1206 aggacttcccgcgaacgaccaccttcaactccgtcccagccttgtgcattcccgacttca 1147 Query: 267 cgtaccccatggcgatgttcttcttcaggcacgggctgaacccgccgctcgtcacctcgc 326 |||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1146 cgtagcccatagcgatgttcttcttcaggcacgggctgaaccctccgctggtcacctcgc 1087 Query: 327 cgatgttctccccggcgccgctcacgatctcgctgtggctccgcgggggcggcccctgcg 386 |||| ||||||| | ||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 1086 cgatcctctcccccgagccgctcaccagctcgctgtggctccgcgcgggcggcccctgcg 1027 Query: 387 agaagatgcccacgcgccggatcttggggccttccttgagctgcttcaggatcacctccg 446 || ||||||||||||| |||||| || ||||||| |||||||||||||||||| || | Sbjct: 1026 tgaccatgcccacgcgcctgatctttggcccttcctggagctgcttcaggatcacgtctg 967 Query: 447 cgcccaggaacccgccctccgccctcctccgcttgccgatcgcccacgacagccccgcct 506 |||||||||| |||||||| |||||||||| ||||||||||||||| || || || || | Sbjct: 966 cgcccaggaaaccgccctctgccctcctcctcttgccgatcgcccatgagaggccggctt 907 Query: 507 ccactggcgtgatgtgctgctccatgtcgttgccgtacaggcagaggcccgcctc 561 |||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 906 ccaccggcgtgatgtgctgctccatgtcgttgccgtacaggcacaggcctgcctc 852
>ref|XM_473945.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1227 Score = 270 bits (136), Expect = 5e-69 Identities = 337/404 (83%) Strand = Plus / Minus Query: 158 ttgtagtacttggtgggcacgaagggcatcttggtgacgaccgcgtcgtactgcttgccg 217 |||||||||||||| |||||||| ||||||||||||||||| || ||||| ||| || Sbjct: 1217 ttgtagtacttggtcggcacgaacggcatcttggtgacgacggcatcgtaggacttccca 1158 Query: 218 cggacgaccaccttgaactccgtgccggccttgtgcagcccgttcttcacgtaccccatg 277 |||||||| ||||||||||| || || |||||||||| ||| || ||||| |||||| Sbjct: 1157 cggacgacaaccttgaactctgtcccagccttgtgcaaaccggattttacgtagcccatg 1098 Query: 278 gcgatgttcttcttcaggcacgggctgaacccgccgctcgtcacctcgccgatgttctcc 337 |||||||||||||||| ||| ||||||||||| || || || ||||| || ||||||||| Sbjct: 1097 gcgatgttcttcttcaagcaggggctgaaccctccactggtaacctcaccaatgttctcc 1038 Query: 338 ccggcgccgctcacgatctcgctgtggctccgcgggggcggcccctgcgagaagatgccc 397 |||| | |||||| ||||| || || ||||| || ||||| || ||||||| || || Sbjct: 1037 ccggagttgctcacaatctcactatgactccgaggaggcggtccttgcgagaggagaccg 978 Query: 398 acgcgccggatcttggggccttccttgagctgcttcaggatcacctccgcgcccaggaac 457 || |||| |||||| |||||||||| ||||||||| |||||||| || || |||||||| Sbjct: 977 acacgcctgatctttgggccttcctggagctgcttgaggatcacatctgctcccaggaag 918 Query: 458 ccgccctccgccctcctccgcttgccgatcgcccacgacagccccgcctccactggcgtg 517 ||||| || || |||||| |||||| || ||||| || || || ||||| ||||| ||| Sbjct: 917 ccgccttctgctttcctcctcttgccaattgcccatgagagaccagcctcaactggtgtg 858 Query: 518 atgtgctgctccatgtcgttgccgtacaggcagaggcccgcctc 561 ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 857 atgtgttgctccatgtcgttgccgtacaggcagaggccagcctc 814
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19, complete sequence Length = 187601 Score = 270 bits (136), Expect = 5e-69 Identities = 337/404 (83%) Strand = Plus / Minus Query: 158 ttgtagtacttggtgggcacgaagggcatcttggtgacgaccgcgtcgtactgcttgccg 217 |||||||||||||| |||||||| ||||||||||||||||| || ||||| ||| || Sbjct: 70597 ttgtagtacttggtcggcacgaacggcatcttggtgacgacggcatcgtaggacttccca 70538 Query: 218 cggacgaccaccttgaactccgtgccggccttgtgcagcccgttcttcacgtaccccatg 277 |||||||| ||||||||||| || || |||||||||| ||| || ||||| |||||| Sbjct: 70537 cggacgacaaccttgaactctgtcccagccttgtgcaaaccggattttacgtagcccatg 70478 Query: 278 gcgatgttcttcttcaggcacgggctgaacccgccgctcgtcacctcgccgatgttctcc 337 |||||||||||||||| ||| ||||||||||| || || || ||||| || ||||||||| Sbjct: 70477 gcgatgttcttcttcaagcaggggctgaaccctccactggtaacctcaccaatgttctcc 70418 Query: 338 ccggcgccgctcacgatctcgctgtggctccgcgggggcggcccctgcgagaagatgccc 397 |||| | |||||| ||||| || || ||||| || ||||| || ||||||| || || Sbjct: 70417 ccggagttgctcacaatctcactatgactccgaggaggcggtccttgcgagaggagaccg 70358 Query: 398 acgcgccggatcttggggccttccttgagctgcttcaggatcacctccgcgcccaggaac 457 || |||| |||||| |||||||||| ||||||||| |||||||| || || |||||||| Sbjct: 70357 acacgcctgatctttgggccttcctggagctgcttgaggatcacatctgctcccaggaag 70298 Query: 458 ccgccctccgccctcctccgcttgccgatcgcccacgacagccccgcctccactggcgtg 517 ||||| || || |||||| |||||| || ||||| || || || ||||| ||||| ||| Sbjct: 70297 ccgccttctgctttcctcctcttgccaattgcccatgagagaccagcctcaactggtgtg 70238 Query: 518 atgtgctgctccatgtcgttgccgtacaggcagaggcccgcctc 561 ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 70237 atgtgttgctccatgtcgttgccgtacaggcagaggccagcctc 70194
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 270 bits (136), Expect = 5e-69 Identities = 337/404 (83%) Strand = Plus / Minus Query: 158 ttgtagtacttggtgggcacgaagggcatcttggtgacgaccgcgtcgtactgcttgccg 217 |||||||||||||| |||||||| ||||||||||||||||| || ||||| ||| || Sbjct: 31737327 ttgtagtacttggtcggcacgaacggcatcttggtgacgacggcatcgtaggacttccca 31737268 Query: 218 cggacgaccaccttgaactccgtgccggccttgtgcagcccgttcttcacgtaccccatg 277 |||||||| ||||||||||| || || |||||||||| ||| || ||||| |||||| Sbjct: 31737267 cggacgacaaccttgaactctgtcccagccttgtgcaaaccggattttacgtagcccatg 31737208 Query: 278 gcgatgttcttcttcaggcacgggctgaacccgccgctcgtcacctcgccgatgttctcc 337 |||||||||||||||| ||| ||||||||||| || || || ||||| || ||||||||| Sbjct: 31737207 gcgatgttcttcttcaagcaggggctgaaccctccactggtaacctcaccaatgttctcc 31737148 Query: 338 ccggcgccgctcacgatctcgctgtggctccgcgggggcggcccctgcgagaagatgccc 397 |||| | |||||| ||||| || || ||||| || ||||| || ||||||| || || Sbjct: 31737147 ccggagttgctcacaatctcactatgactccgaggaggcggtccttgcgagaggagaccg 31737088 Query: 398 acgcgccggatcttggggccttccttgagctgcttcaggatcacctccgcgcccaggaac 457 || |||| |||||| |||||||||| ||||||||| |||||||| || || |||||||| Sbjct: 31737087 acacgcctgatctttgggccttcctggagctgcttgaggatcacatctgctcccaggaag 31737028 Query: 458 ccgccctccgccctcctccgcttgccgatcgcccacgacagccccgcctccactggcgtg 517 ||||| || || |||||| |||||| || ||||| || || || ||||| ||||| ||| Sbjct: 31737027 ccgccttctgctttcctcctcttgccaattgcccatgagagaccagcctcaactggtgtg 31736968 Query: 518 atgtgctgctccatgtcgttgccgtacaggcagaggcccgcctc 561 ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 31736967 atgtgttgctccatgtcgttgccgtacaggcagaggccagcctc 31736924
>dbj|AK099234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106I02, full insert sequence Length = 1430 Score = 270 bits (136), Expect = 5e-69 Identities = 337/404 (83%) Strand = Plus / Minus Query: 158 ttgtagtacttggtgggcacgaagggcatcttggtgacgaccgcgtcgtactgcttgccg 217 |||||||||||||| |||||||| ||||||||||||||||| || ||||| ||| || Sbjct: 1262 ttgtagtacttggtcggcacgaacggcatcttggtgacgacggcatcgtaggacttccca 1203 Query: 218 cggacgaccaccttgaactccgtgccggccttgtgcagcccgttcttcacgtaccccatg 277 |||||||| ||||||||||| || || |||||||||| ||| || ||||| |||||| Sbjct: 1202 cggacgacaaccttgaactctgtcccagccttgtgcaaaccggattttacgtagcccatg 1143 Query: 278 gcgatgttcttcttcaggcacgggctgaacccgccgctcgtcacctcgccgatgttctcc 337 |||||||||||||||| ||| ||||||||||| || || || ||||| || ||||||||| Sbjct: 1142 gcgatgttcttcttcaagcaggggctgaaccctccactggtaacctcaccaatgttctcc 1083 Query: 338 ccggcgccgctcacgatctcgctgtggctccgcgggggcggcccctgcgagaagatgccc 397 |||| | |||||| ||||| || || ||||| || ||||| || ||||||| || || Sbjct: 1082 ccggagttgctcacaatctcactatgactccgaggaggcggtccttgcgagaggagaccg 1023 Query: 398 acgcgccggatcttggggccttccttgagctgcttcaggatcacctccgcgcccaggaac 457 || |||| |||||| |||||||||| ||||||||| |||||||| || || |||||||| Sbjct: 1022 acacgcctgatctttgggccttcctggagctgcttgaggatcacatctgctcccaggaag 963 Query: 458 ccgccctccgccctcctccgcttgccgatcgcccacgacagccccgcctccactggcgtg 517 ||||| || || |||||| |||||| || ||||| || || || ||||| ||||| ||| Sbjct: 962 ccgccttctgctttcctcctcttgccaattgcccatgagagaccagcctcaactggtgtg 903 Query: 518 atgtgctgctccatgtcgttgccgtacaggcagaggcccgcctc 561 ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 902 atgtgttgctccatgtcgttgccgtacaggcagaggccagcctc 859
>dbj|AK059270.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B08, full insert sequence Length = 994 Score = 262 bits (132), Expect = 1e-66 Identities = 336/404 (83%) Strand = Plus / Minus Query: 158 ttgtagtacttggtgggcacgaagggcatcttggtgacgaccgcgtcgtactgcttgccg 217 |||||||||||||| |||||||| ||||||||||||||||| || ||||| ||| || Sbjct: 812 ttgtagtacttggtcggcacgaacggcatcttggtgacgacggcatcgtaggacttccca 753 Query: 218 cggacgaccaccttgaactccgtgccggccttgtgcagcccgttcttcacgtaccccatg 277 |||||||| ||||||||||| || || |||||||||| ||| || ||||| |||||| Sbjct: 752 cggacgacaaccttgaactctgtcccagccttgtgcaaaccggattttacgtagcccatg 693 Query: 278 gcgatgttcttcttcaggcacgggctgaacccgccgctcgtcacctcgccgatgttctcc 337 |||||||||||||||| ||| ||||||||||| || || || ||||| || ||||||||| Sbjct: 692 gcgatgttcttcttcaagcaggggctgaaccctccactggtaacctcaccaatgttctcc 633 Query: 338 ccggcgccgctcacgatctcgctgtggctccgcgggggcggcccctgcgagaagatgccc 397 |||| | |||||| ||||| || || ||||| || ||||| || ||||||| || || Sbjct: 632 ccggagttgctcacaatctcactatgactccgaggaggcggtccttgcgagaggagaccg 573 Query: 398 acgcgccggatcttggggccttccttgagctgcttcaggatcacctccgcgcccaggaac 457 || |||| |||||| |||||||||| ||||||||| |||||||| || || |||||||| Sbjct: 572 acacgcctgatctttgggccttcctggagctgcttgaggatcacatctgctcccaggaag 513 Query: 458 ccgccctccgccctcctccgcttgccgatcgcccacgacagccccgcctccactggcgtg 517 ||||| || || |||||| |||||| || ||||| || || || ||||| ||||| ||| Sbjct: 512 ccgccttctgctttcctcctcttgccaattgcccatgagagaccagcctcaactggtgtg 453 Query: 518 atgtgctgctccatgtcgttgccgtacaggcagaggcccgcctc 561 ||||| ||| |||||||||||||||||||||||||||| ||||| Sbjct: 452 atgtgttgccccatgtcgttgccgtacaggcagaggccagcctc 409
>gb|AY110998.1| Zea mays CL371_1 mRNA sequence Length = 1475 Score = 190 bits (96), Expect = 3e-45 Identities = 162/184 (88%) Strand = Plus / Minus Query: 147 tctacggggccttgtagtacttggtgggcacgaagggcatcttggtgacgaccgcgtcgt 206 |||||| || |||||||||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 1296 tctacgagggcttgtagtacttggtgggcacgaacggcatcttggtgaccacggcgtcgt 1237 Query: 207 actgcttgccgcggacgaccaccttgaactccgtgccggccttgtgcagcccgttcttca 266 | ||| ||||| ||||||||||| |||||||| || |||||||||| || ||||| Sbjct: 1236 aggacttcccgcgaacgaccaccttcaactccgtcccagccttgtgcattcccgacttca 1177 Query: 267 cgtaccccatggcgatgttcttcttcaggcacgggctgaacccgccgctcgtcacctcgc 326 |||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1176 cgtagcccatagcgatgttcttcttcaggcacgggctgaaccctccgctggtcacctcgc 1117 Query: 327 cgat 330 |||| Sbjct: 1116 cgat 1113 Score = 161 bits (81), Expect = 3e-36 Identities = 146/170 (85%) Strand = Plus / Minus Query: 392 atgcccacgcgccggatcttggggccttccttgagctgcttcaggatcacctccgcgccc 451 ||||||||||||| |||||| || ||||||| |||||||||||||||||| || |||||| Sbjct: 1051 atgcccacgcgcctgatctttggcccttcctggagctgcttcaggatcacgtctgcgccc 992 Query: 452 aggaacccgccctccgccctcctccgcttgccgatcgcccacgacagccccgcctccact 511 ||||| |||||||| |||||||||| |||||||| || || || || ||||| Sbjct: 991 aggaaaccgccctctgccctcctcctnnnnnnnatcgcccatgagaggccggcttccacc 932 Query: 512 ggcgtgatgtgctgctccatgtcgttgccgtacaggcagaggcccgcctc 561 |||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 931 ggcgtgatgtgctgctccatgtcgttgccgtacaggcacaggcctgcctc 882
>emb|Z99769.1|FTZ99769 Flaveria trinervia GDCST gene Length = 5817 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaacccgccgctcgtcac 321 |||||||||||||||| | ||||||||||||| ||||||||| ||||| ||||| || || Sbjct: 4849 cttcacgtaccccatgcctatgttcttcttcaagcacgggctaaaccctccgctagtaac 4790 Query: 322 ctcgccgatgttctcccc 339 ||| || ||||||||||| Sbjct: 4789 ctcaccaatgttctcccc 4772 Score = 42.1 bits (21), Expect = 1.9 Identities = 90/113 (79%) Strand = Plus / Minus Query: 428 tgcttcaggatcacctccgcgcccaggaacccgccctccgccctcctccgcttgccgatc 487 |||||||||||||| || || || || || || ||||| |||| || | |||||| || Sbjct: 4683 tgcttcaggatcacttcagctccgagaaagccaccctcagcccgtcttctcttgccaatg 4624 Query: 488 gcccacgacagccccgcctccactggcgtgatgtgctgctccatgtcgttgcc 540 ||||| | ||||| |||||||| || || ||||| ||||||||||| ||||| Sbjct: 4623 gcccatgtgagcccggcctccacaggggttatgtgttgctccatgtcattgcc 4571
>emb|Z25858.1|FPTSGDC F.pringlei mRNA for T subunit of glycine decarboxylase multi-enzyme complex Length = 1382 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaacccgccgctcgtcac 321 |||||| ||||||||| | ||||||||||||| ||||||||| ||||| ||||| || || Sbjct: 1139 cttcacataccccatgcctatgttcttcttcaagcacgggctaaaccctccgctagtaac 1080 Query: 322 ctcgccgatgttctcccc 339 ||| || ||||||||||| Sbjct: 1079 ctcaccaatgttctcccc 1062 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 497 agccccgcctccactggcgtgatgtgctgctccatgtcgttgcc 540 ||||| |||||||| || || ||||| ||||||||||| ||||| Sbjct: 904 agcccggcctccacgggggttatgtgttgctccatgtcattgcc 861
>emb|Z71184.1|FAGDCST F.anomala gdcsT gene Length = 3353 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaacccgccgctcgtcac 321 |||||| ||||||||| | ||||||||||||| ||| ||||| ||||| || || || || Sbjct: 2173 cttcacataccccatgcctatgttcttcttcaagcatgggctaaaccctccactagtaac 2114 Query: 322 ctcgccgatgttctcccc 339 ||| |||||||||||||| Sbjct: 2113 ctcaccgatgttctcccc 2096 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 157 cttgtagtacttggtgggcacgaagggcatcttggt 192 |||||||||||| ||||| ||||||||||| ||||| Sbjct: 2278 cttgtagtactttgtgggtacgaagggcattttggt 2243 Score = 42.1 bits (21), Expect = 1.9 Identities = 90/113 (79%) Strand = Plus / Minus Query: 428 tgcttcaggatcacctccgcgcccaggaacccgccctccgccctcctccgcttgccgatc 487 |||||||||||||| || || || || || || ||||| |||| || | |||||| || Sbjct: 2007 tgcttcaggatcacatcagctccgagaaaaccaccctcagcccgtcttctcttgccaatg 1948 Query: 488 gcccacgacagccccgcctccactggcgtgatgtgctgctccatgtcgttgcc 540 ||||| | ||||| |||||||| || || ||||| ||||||||||| ||||| Sbjct: 1947 gcccaagtgagcccagcctccacaggggttatgtgttgctccatgtcattgcc 1895
>emb|CR385258.1| Gallus gallus finished cDNA, clone ChEST548a3 Length = 971 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 170 gtgggcacgaagggcatcttggtgac 195 |||||||||||||||||||||||||| Sbjct: 918 gtgggcacgaagggcatcttggtgac 893 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 496 cagccccgcctccactggcgtgatgtgctgctccatgtcgttgccgtacaggcagaggcc 555 |||||| ||||||||||||||| || || || |||||||||||||| |||||||| || Sbjct: 592 cagcccagcctccactggcgtggtgctctcatcgatgtcgttgccgtagaggcagagccc 533 Query: 556 cgcctc 561 ||||| Sbjct: 532 ggcctc 527 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 cacgtaccccatggcgatgttctt 288 |||||| ||||||||||||||||| Sbjct: 823 cacgtagcccatggcgatgttctt 800
>ref|NM_204788.1| Gallus gallus T-protein (LOC395566), mRNA Length = 1228 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 170 gtgggcacgaagggcatcttggtgac 195 |||||||||||||||||||||||||| Sbjct: 1176 gtgggcacgaagggcatcttggtgac 1151 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 496 cagccccgcctccactggcgtgatgtgctgctccatgtcgttgccgtacaggcagaggcc 555 |||||| ||||||||||||||| || || || |||||||||||||| |||||||| || Sbjct: 850 cagcccagcctccactggcgtggtgctctcatcgatgtcgttgccgtagaggcagagccc 791 Query: 556 cgcctc 561 ||||| Sbjct: 790 ggcctc 785 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 cacgtaccccatggcgatgttctt 288 |||||| ||||||||||||||||| Sbjct: 1081 cacgtagcccatggcgatgttctt 1058
>dbj|D11162.1|CHKTP Gallus gallus mRNA for T-protein, complete cds Length = 1228 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 170 gtgggcacgaagggcatcttggtgac 195 |||||||||||||||||||||||||| Sbjct: 1176 gtgggcacgaagggcatcttggtgac 1151 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 496 cagccccgcctccactggcgtgatgtgctgctccatgtcgttgccgtacaggcagaggcc 555 |||||| ||||||||||||||| || || || |||||||||||||| |||||||| || Sbjct: 850 cagcccagcctccactggcgtggtgctctcatcgatgtcgttgccgtagaggcagagccc 791 Query: 556 cgcctc 561 ||||| Sbjct: 790 ggcctc 785 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 cacgtaccccatggcgatgttctt 288 |||||| ||||||||||||||||| Sbjct: 1081 cacgtagcccatggcgatgttctt 1058
>gb|BC083400.1| Danio rerio zgc:103483, mRNA (cDNA clone MGC:103483 IMAGE:7237874), complete cds Length = 2164 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 159 tgtagtacttggtgggcacgaagggcatcttggtgac 195 |||||||||||||||| ||||| ||||||||| |||| Sbjct: 1332 tgtagtacttggtgggaacgaatggcatcttgctgac 1296
>emb|CR450777.5| Zebrafish DNA sequence from clone DKEY-16C7 in linkage group 8, complete sequence Length = 97291 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 159 tgtagtacttggtgggcacgaagggcatcttggtgac 195 |||||||||||||||| ||||| ||||||||| |||| Sbjct: 87730 tgtagtacttggtgggaacgaatggcatcttgctgac 87766
>gb|DQ104411.1| Danio rerio glycine cleavage system protein T mRNA, complete cds Length = 1914 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 159 tgtagtacttggtgggcacgaagggcatcttggtgac 195 |||||||||||||||| ||||| ||||||||| |||| Sbjct: 1325 tgtagtacttggtgggaacgaatggcatcttgctgac 1289
>gb|BC094974.1| Danio rerio cDNA clone MGC:109741 IMAGE:7274166, complete cds Length = 970 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 159 tgtagtacttggtgggcacgaagggcatcttggtgac 195 |||||||||||||||| ||||| ||||||||| |||| Sbjct: 438 tgtagtacttggtgggaacgaatggcatcttgctgac 402
>ref|NM_001006021.1| Danio rerio zgc:103483 (zgc:103483), mRNA Length = 2164 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 159 tgtagtacttggtgggcacgaagggcatcttggtgac 195 |||||||||||||||| ||||| ||||||||| |||| Sbjct: 1332 tgtagtacttggtgggaacgaatggcatcttgctgac 1296
>ref|NM_101057.3| Arabidopsis thaliana aminomethyltransferase AT1G11860 transcript variant AT1G11860.1 mRNA, complete cds Length = 1581 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaaccc 309 |||||| || |||||||| ||||||||||||||| |||||| ||||| Sbjct: 1270 cttcacatatcccatggctatgttcttcttcaggttcgggctaaaccc 1223
>ref|NM_179315.1| Arabidopsis thaliana aminomethyltransferase AT1G11860 transcript variant AT1G11860.2 mRNA, complete cds Length = 1582 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaaccc 309 |||||| || |||||||| ||||||||||||||| |||||| ||||| Sbjct: 1271 cttcacatatcccatggctatgttcttcttcaggttcgggctaaaccc 1224
>gb|AY125509.1| Arabidopsis thaliana At1g11860/F12F1_30 mRNA, complete cds Length = 1478 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaaccc 309 |||||| || |||||||| ||||||||||||||| |||||| ||||| Sbjct: 1216 cttcacatatcccatggctatgttcttcttcaggttcgggctaaaccc 1169
>emb|Z25862.1|STTSGDC S.tuberosum mRNA for T subunit of glycine decarboxylase multi-enzyme complex Length = 1418 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 157 cttgtagtacttggtgggcacgaagggcatcttggt 192 |||||||||||||||||| || || ||||||||||| Sbjct: 1277 cttgtagtacttggtgggtacaaaaggcatcttggt 1242 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 519 tgtgctgctccatgtcgttgccgta 543 |||||||||||||||| |||||||| Sbjct: 915 tgtgctgctccatgtcattgccgta 891
>gb|BT006361.1| Arabidopsis thaliana At1g11860/F12F1_30 gene, complete cds Length = 1227 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaaccc 309 |||||| || |||||||| ||||||||||||||| |||||| ||||| Sbjct: 1113 cttcacatatcccatggctatgttcttcttcaggttcgggctaaaccc 1066
>emb|BX815798.1|CNS0ABJN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1374 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaaccc 309 |||||| || |||||||| ||||||||||||||| |||||| ||||| Sbjct: 1116 cttcacatatcccatggctatgttcttcttcaggttcgggctaaaccc 1069
>emb|BX815440.1|CNS0ABEC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1514 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaaccc 309 |||||| || |||||||| ||||||||||||||| |||||| ||||| Sbjct: 1270 cttcacatatcccatggctatgttcttcttcaggttcgggctaaaccc 1223
>emb|BX815010.1|CNS0ABD4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS23ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1405 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaaccc 309 |||||| || |||||||| ||||||||||||||| |||||| ||||| Sbjct: 1157 cttcacatatcccatggctatgttcttcttcaggttcgggctaaaccc 1110
>emb|BX815758.1|CNS0AAGH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1460 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaaccc 309 |||||| || |||||||| ||||||||||||||| |||||| ||||| Sbjct: 1200 cttcacatatcccatggctatgttcttcttcaggttcgggctaaaccc 1153
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 262 cttcacgtaccccatggcgatgttcttcttcaggcacgggctgaaccc 309 |||||| || |||||||| ||||||||||||||| |||||| ||||| Sbjct: 111493 cttcacatatcccatggctatgttcttcttcaggttcgggctaaaccc 111540
>gb|AC147370.4| Mus musculus BAC clone RP24-243N3 from chromosome 12, complete sequence Length = 162528 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 408 tcttggggccttccttgagctg 429 |||||||||||||||||||||| Sbjct: 79774 tcttggggccttccttgagctg 79753
>gb|AC124365.5| Mus musculus BAC clone RP24-539F12 from chromosome 12, complete sequence Length = 148952 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 408 tcttggggccttccttgagctg 429 |||||||||||||||||||||| Sbjct: 146848 tcttggggccttccttgagctg 146869
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 cggcgccgctcacgatctcgct 360 |||||||||||||||||||||| Sbjct: 5003062 cggcgccgctcacgatctcgct 5003083
>ref|XM_960019.1| Neurospora crassa OR74A hypothetical protein (NCU02727.1) partial mRNA Length = 1368 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 157 cttgtagtacttggtgggcacgaagggcatcttggtgacgaccgc 201 ||||||||||||| | ||||| || ||||||||||| || ||||| Sbjct: 1359 cttgtagtacttgctaggcacaaacggcatcttggttaccaccgc 1315
>ref|XM_331925.1| Neurospora crassa OR74A hypothetical protein (NCU02727.1) partial mRNA Length = 1368 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 157 cttgtagtacttggtgggcacgaagggcatcttggtgacgaccgc 201 ||||||||||||| | ||||| || ||||||||||| || ||||| Sbjct: 1359 cttgtagtacttgctaggcacaaacggcatcttggttaccaccgc 1315
>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence Length = 111678 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 263 ttcacgtaccccatggcgatgttcttcttcaggcacgggct 303 ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 21252 ttcacgtaccccatggctatatttttcttgaggcatgggct 21292
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 530 atgtcgttgccgtacaggcagaggcccgc 558 ||||||||||| || |||||||||||||| Sbjct: 2341798 atgtcgttgccataaaggcagaggcccgc 2341770
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 530 atgtcgttgccgtacaggcagaggcccgc 558 ||||||||||||| ||||||||| ||||| Sbjct: 2012087 atgtcgttgccgtgcaggcagagccccgc 2012059
>gb|AC140360.4| Mus musculus BAC clone RP24-241G4 from chromosome 12, complete sequence Length = 181901 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 ggggcggcccctgcgagaaga 392 ||||||||||||||||||||| Sbjct: 69507 ggggcggcccctgcgagaaga 69527
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ctccgccctcctccgcttgc 482 |||||||||||||||||||| Sbjct: 794998 ctccgccctcctccgcttgc 794979
>ref|XM_585852.2| PREDICTED: Bos taurus similar to Ankyrin-2 (Brain ankyrin) (Ankyrin B) (Ankyrin, nonerythroid) (LOC539238), mRNA Length = 8337 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 ttcttcttcaggcacgggctgaac 307 ||||||||||||||| |||||||| Sbjct: 3780 ttcttcttcaggcactggctgaac 3757
>ref|XM_362380.1| Magnaporthe grisea 70-15 hypothetical protein (MG04826.4) partial cds Length = 1395 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 gaagggcatcttggtgacgaccgc 201 ||||||||||||||| |||||||| Sbjct: 1365 gaagggcatcttggtcacgaccgc 1342
>ref|XM_866729.1| PREDICTED: Bos taurus similar to restin-like 2, transcript variant 2 (LOC515213), mRNA Length = 2610 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 987 tccattgttttttccttctg 968
>ref|XM_878951.1| PREDICTED: Bos taurus similar to restin-like 2, transcript variant 7 (LOC515213), mRNA Length = 1771 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 987 tccattgttttttccttctg 968
>ref|XM_878926.1| PREDICTED: Bos taurus similar to restin-like 2, transcript variant 6 (LOC515213), mRNA Length = 1997 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 987 tccattgttttttccttctg 968
>ref|XM_593196.2| PREDICTED: Bos taurus similar to restin-like 2, transcript variant 1 (LOC515213), mRNA Length = 1754 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 987 tccattgttttttccttctg 968
>ref|XM_878869.1| PREDICTED: Bos taurus similar to restin-like 2, transcript variant 5 (LOC515213), mRNA Length = 1856 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 987 tccattgttttttccttctg 968
>ref|XM_878842.1| PREDICTED: Bos taurus similar to restin-like 2, transcript variant 4 (LOC515213), mRNA Length = 1771 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 987 tccattgttttttccttctg 968
>ref|XM_878808.1| PREDICTED: Bos taurus similar to restin-like 2, transcript variant 3 (LOC515213), mRNA Length = 2024 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 894 tccattgttttttccttctg 875
>gb|BT012751.1| Lycopersicon esculentum clone 113690F, mRNA sequence Length = 2576 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 157 cttgtagtacttggtgggcacgaagggcatcttggt 192 ||||||||||||| |||| || || ||||||||||| Sbjct: 2459 cttgtagtacttgctgggtacaaaaggcatcttggt 2424
>gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome 8, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aaaattgcagtccaagcagg 107 |||||||||||||||||||| Sbjct: 79381 aaaattgcagtccaagcagg 79400
>ref|XM_545762.2| PREDICTED: Canis familiaris similar to KAT protein (LOC488645), mRNA Length = 542 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 ggctccgcgggggcggcccc 382 |||||||||||||||||||| Sbjct: 14 ggctccgcgggggcggcccc 33
>ref|XM_857345.1| PREDICTED: Canis familiaris similar to restin-like 2, transcript variant 6 (LOC483020), mRNA Length = 3844 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 1289 tccattgttttttccttctg 1270
>ref|XM_857317.1| PREDICTED: Canis familiaris similar to restin-like 2, transcript variant 5 (LOC483020), mRNA Length = 1670 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 1196 tccattgttttttccttctg 1177
>ref|XM_857288.1| PREDICTED: Canis familiaris similar to restin-like 2, transcript variant 4 (LOC483020), mRNA Length = 1736 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 1196 tccattgttttttccttctg 1177
>ref|XM_540135.2| PREDICTED: Canis familiaris similar to restin-like 2, transcript variant 1 (LOC483020), mRNA Length = 1631 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 1196 tccattgttttttccttctg 1177
>ref|XM_857235.1| PREDICTED: Canis familiaris similar to restin-like 2, transcript variant 3 (LOC483020), mRNA Length = 578 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 283 tccattgttttttccttctg 264
>ref|XM_845695.1| PREDICTED: Canis familiaris similar to restin-like 2, transcript variant 2 (LOC483020), mRNA Length = 3748 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tccattgttttttccttctg 135 |||||||||||||||||||| Sbjct: 1196 tccattgttttttccttctg 1177
>gb|AC125207.5| Mus musculus BAC clone RP23-220C16 from 8, complete sequence Length = 189936 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aaaattgcagtccaagcagg 107 |||||||||||||||||||| Sbjct: 180761 aaaattgcagtccaagcagg 180780
>gb|AC087289.9| Homo sapiens chromosome 17, clone RP11-552F3, complete sequence Length = 203765 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 ttccttgagctgcttcagga 437 |||||||||||||||||||| Sbjct: 105669 ttccttgagctgcttcagga 105688
>gb|AF239168.2| Sus scrofa similar to glycine cleavage system T-protein mRNA sequence Length = 1005 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 530 atgtcgttgccgtacaggcagaggcccgcctc 561 |||||||| || |||||||||||||| ||||| Sbjct: 1001 atgtcgttcccatacaggcagaggcctgcctc 970
>gb|AF239167.2| Sus scrofa glycine cleavage system T-protein mRNA, partial cds Length = 717 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 530 atgtcgttgccgtacaggcagaggcccgcctc 561 |||||||| || |||||||||||||| ||||| Sbjct: 713 atgtcgttcccatacaggcagaggcctgcctc 682
>gb|AF036701.1| Caenorhabditis elegans cosmid ZC416, complete sequence Length = 35586 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 cgccctccgccctcctccgc 478 |||||||||||||||||||| Sbjct: 34346 cgccctccgccctcctccgc 34365
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 gcatcttggtgacgaccgcgtcgt 206 |||||||||||||| ||||||||| Sbjct: 274197 gcatcttggtgacggccgcgtcgt 274174
>emb|CR859402.1| Pongo pygmaeus mRNA; cDNA DKFZp459J1227 (from clone DKFZp459J1227) Length = 4462 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 530 atgtcgttgccgtacaggcagaggcccgcctc 561 ||||| || ||||||||||||||||| ||||| Sbjct: 3302 atgtcattcccgtacaggcagaggcctgcctc 3271
>emb|CR354599.10| Zebrafish DNA sequence from clone CH211-259K16 in linkage group 13, complete sequence Length = 149455 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ccattgttttttccttctgt 136 |||||||||||||||||||| Sbjct: 99179 ccattgttttttccttctgt 99160
>dbj|AK128407.1| Homo sapiens cDNA FLJ46550 fis, clone THYMU3038603, moderately similar to Mus musculus WW domain binding protein 2 (Wbp2) Length = 3717 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 ttccttgagctgcttcagga 437 |||||||||||||||||||| Sbjct: 1863 ttccttgagctgcttcagga 1882
>dbj|AK094458.1| Homo sapiens cDNA FLJ37139 fis, clone BRACE2023727, weakly similar to Human WW domain binding protein-2 mRNA Length = 2069 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 ttccttgagctgcttcagga 437 |||||||||||||||||||| Sbjct: 171 ttccttgagctgcttcagga 190
>dbj|AB220490.1| Macaca fascicularis mRNA, clone QmoA-14709: similar to Homo sapiens aminomethyltransferase(AMT),mRNA, NM_000481.2 Length = 2054 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 530 atgtcgttgccgtacaggcagaggcccgcctc 561 ||||| || ||||||||||||||||| ||||| Sbjct: 851 atgtcattcccgtacaggcagaggcctgcctc 820
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 atcgcccacgacagccccgcctcc 508 ||||||||||||||| |||||||| Sbjct: 2891891 atcgcccacgacagcgccgcctcc 2891868
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 424 gagctgcttcaggatcacctccgcgcccaggaacccgccc 463 ||||||| ||||||| | |||||||| |||||||||||| Sbjct: 4277577 gagctgcgccaggatcgcgtccgcgccgaggaacccgccc 4277538
>gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, complete sequence Length = 163550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cccgccctccgccctcctcc 476 |||||||||||||||||||| Sbjct: 33265 cccgccctccgccctcctcc 33246
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ccattgttttttccttctgtacgcacag 144 |||||||||| |||||||||||| |||| Sbjct: 23023348 ccattgttttgtccttctgtacgtacag 23023375
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ccattgttttttccttctgtacgcacag 144 |||||||||| |||||||||||| |||| Sbjct: 47745 ccattgttttgtccttctgtacgtacag 47772
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ccattgttttttccttctgtacgcacag 144 |||||||||| |||||||||||| |||| Sbjct: 143150 ccattgttttgtccttctgtacgtacag 143177 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,635,078 Number of Sequences: 3902068 Number of extensions: 3635078 Number of successful extensions: 68281 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67754 Number of HSP's gapped (non-prelim): 515 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)