| Clone Name | rbaal10f02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY255503.1| Triticum aestivum putative adenine phosphoribosyltransferase mRNA, complete cds Length = 1097 Score = 842 bits (425), Expect = 0.0 Identities = 585/633 (92%), Gaps = 8/633 (1%) Strand = Plus / Minus Query: 9 atggttcttttctttgcggctaacagcggtgattcccgacagnaaataactacaaagctc 68 |||||||||||||||||||||||| | | ||||||||||||| |||||||||||| |||| Sbjct: 1005 atggttcttttctttgcggctaacggtgatgattcccgacag-aaataactacaa-gctc 948 Query: 69 tcatcaaatactctactactggaaaaactagtgctaggaagactacatctcatctatctc 128 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 947 tcatcaaatactccactactggaaaa-ctagtgctaggaagactacatctcatctatctc 889 Query: 129 accctctccatcaagna---cacttagcaatagcagctgcccctaacagtgtactgcaga 185 |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 888 accctctccaccaagaaagacacttagcaatagcagctgcccctaacagtgtactgcaga 829 Query: 186 cttatcaatgcacatccaccgtgcgcgcccttgcaaatgaatgaagctgtcatcctttct 245 |||||||| |||||||||| ||||||| ||||||| |||||||||||| ||||||| | Sbjct: 828 gttatcaatacacatccaccatgcgcgc--ttgcaaacgaatgaagctgtgatccttttt 771 Query: 246 ctgatcaatcatcatcatttcattttttatttgcgggactccaccagtatgtaaactggc 305 |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 770 ctgatcaatcatcatcattttacattttatttgcgggactccaccagtatgtaaactggc 711 Query: 306 tttccatcgagcttgtagaaatccttaaacttggggagtccaatgaggcatgcacactca 365 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 710 tttccatcgagcttgtagaaatccttaaacttaggaaggccaatgaggcatgcacactca 651 Query: 366 acaacatcagctgcggcacgttcaagaagttttatagctgcagaaagtgttccaccggtt 425 ||||| ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 650 acaacgtcagctgcggcgcgttcaagaagttttatggctgctgaaagtgtcccaccggtt 591 Query: 426 gcaaccagatcatcaaccaccaccacacgctcgccaggttcgacggcgccaacatgcatc 485 |||||||||||||| |||||||||||||| || || || |||||||| |||||||||||| Sbjct: 590 gcaaccagatcatccaccaccaccacacggtctccgggctcgacggctccaacatgcatc 531 Query: 486 tccaagcaatccgtcccgtactcaagcgtataagtctcggaaatcacctcgcctgggagc 545 ||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||| Sbjct: 530 tccaagcaatccgtcccatactcgagcgtataattctcggaaatcacctcacctgggagt 471 Query: 546 ttcccgggtttgcgcagcggtatgaatttggctccgatggccagcgcaatcgccgggcca 605 || ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 470 ttgccgggtttgcgcagcggtatgaatttggctccgatagccagcgcgatcgccgggccg 411 Query: 606 aatatgaaccctctcgcctcaatgcctgcgacg 638 ||||||||||||||||| ||||| ||||||||| Sbjct: 410 aatatgaaccctctcgcttcaatacctgcgacg 378
>ref|XM_466713.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 321 bits (162), Expect = 2e-84 Identities = 315/366 (86%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 332 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||||| Sbjct: 789 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcctta 730 Query: 333 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 392 || || ||||| |||||||| || || ||||||||||| |||||| | || ||||||||| Sbjct: 729 aattttgggagcccaatgagacacgcgcactcaacaacgtcagctccagcgcgttcaaga 670 Query: 393 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 452 || ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || |||| Sbjct: 669 agccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatcagcaca 610 Query: 453 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 512 ||||| |||||||| | ||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 609 cgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtactcgaga 550 Query: 513 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 572 ||| ||||| |||||||||||||||||||| ||| ||| || |||| |||||||||| Sbjct: 549 acatacgtctcagaaatcacctcgcctgggagtttcttgggcttacgcaacggtatgaat 490 Query: 573 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 632 ||||| || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 489 ttggcgccaattgccagcgcgatcgccgggccaaatatgaaccccctagcctcaatcccg 430 Query: 633 gcgacg 638 |||||| Sbjct: 429 gcgacg 424
>ref|XM_466714.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 321 bits (162), Expect = 2e-84 Identities = 315/366 (86%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 332 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||||| Sbjct: 714 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcctta 655 Query: 333 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 392 || || ||||| |||||||| || || ||||||||||| |||||| | || ||||||||| Sbjct: 654 aattttgggagcccaatgagacacgcgcactcaacaacgtcagctccagcgcgttcaaga 595 Query: 393 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 452 || ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || |||| Sbjct: 594 agccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatcagcaca 535 Query: 453 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 512 ||||| |||||||| | ||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 534 cgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtactcgaga 475 Query: 513 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 572 ||| ||||| |||||||||||||||||||| ||| ||| || |||| |||||||||| Sbjct: 474 acatacgtctcagaaatcacctcgcctgggagtttcttgggcttacgcaacggtatgaat 415 Query: 573 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 632 ||||| || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 414 ttggcgccaattgccagcgcgatcgccgggccaaatatgaaccccctagcctcaatcccg 355 Query: 633 gcgacg 638 |||||| Sbjct: 354 gcgacg 349
>dbj|AK070784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064G04, full insert sequence Length = 1038 Score = 321 bits (162), Expect = 2e-84 Identities = 315/366 (86%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 332 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||||| Sbjct: 714 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcctta 655 Query: 333 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 392 || || ||||| |||||||| || || ||||||||||| |||||| | || ||||||||| Sbjct: 654 aattttgggagcccaatgagacacgcgcactcaacaacgtcagctccagcgcgttcaaga 595 Query: 393 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 452 || ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || |||| Sbjct: 594 agccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatcagcaca 535 Query: 453 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 512 ||||| |||||||| | ||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 534 cgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtactcgaga 475 Query: 513 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 572 ||| ||||| |||||||||||||||||||| ||| ||| || |||| |||||||||| Sbjct: 474 acatacgtctcagaaatcacctcgcctgggagtttcttgggcttacgcaacggtatgaat 415 Query: 573 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 632 ||||| || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 414 ttggcgccaattgccagcgcgatcgccgggccaaatatgaaccccctagcctcaatcccg 355 Query: 633 gcgacg 638 |||||| Sbjct: 354 gcgacg 349
>dbj|AK069606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024J22, full insert sequence Length = 1065 Score = 321 bits (162), Expect = 2e-84 Identities = 315/366 (86%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 332 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||||| Sbjct: 789 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcctta 730 Query: 333 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 392 || || ||||| |||||||| || || ||||||||||| |||||| | || ||||||||| Sbjct: 729 aattttgggagcccaatgagacacgcgcactcaacaacgtcagctccagcgcgttcaaga 670 Query: 393 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 452 || ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || |||| Sbjct: 669 agccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatcagcaca 610 Query: 453 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 512 ||||| |||||||| | ||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 609 cgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtactcgaga 550 Query: 513 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 572 ||| ||||| |||||||||||||||||||| ||| ||| || |||| |||||||||| Sbjct: 549 acatacgtctcagaaatcacctcgcctgggagtttcttgggcttacgcaacggtatgaat 490 Query: 573 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 632 ||||| || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 489 ttggcgccaattgccagcgcgatcgccgggccaaatatgaaccccctagcctcaatcccg 430 Query: 633 gcgacg 638 |||||| Sbjct: 429 gcgacg 424
>ref|XM_473079.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 639 Score = 313 bits (158), Expect = 4e-82 Identities = 314/366 (85%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 332 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| |||| Sbjct: 638 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaattctta 579 Query: 333 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 392 |||| || || ||||||||||||||||||||||| || |||||| | || ||||||||| Sbjct: 578 tacttaggaaggccaatgaggcatgcacactcaactacgtcagctccagctcgttcaaga 519 Query: 393 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 452 |||||||| || ||| |||||||||||||||||||||| | ||||||||| ||||| || Sbjct: 518 agttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgaccactacg 459 Query: 453 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 512 ||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 458 cgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatactcaagt 399 Query: 513 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 572 |||| ||||| ||||| ||||| |||||||| ||| |||||||||| |||||||||| Sbjct: 398 atataggtctcagaaattacctcacctgggagtttcttaggtttgcgcaacggtatgaat 339 Query: 573 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 632 || ||||| || || || || ||||| |||||||||||||| ||||| || ||||| ||| Sbjct: 338 tttgctccaattgctagtgcgatcgctgggccaaatatgaatcctctggcttcaatacct 279 Query: 633 gcgacg 638 |||||| Sbjct: 278 gcgacg 273
>gb|AY238894.1| Oryza sativa (indica cultivar-group) adenine phosphoribosyltransferase form 2 mRNA, complete cds Length = 1122 Score = 313 bits (158), Expect = 4e-82 Identities = 314/366 (85%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 332 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| |||| Sbjct: 762 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaattctta 703 Query: 333 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 392 |||| || || ||||||||||||||||||||||| || |||||| | || ||||||||| Sbjct: 702 tacttaggaaggccaatgaggcatgcacactcaactacgtcagctccagctcgttcaaga 643 Query: 393 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 452 |||||||| || ||| |||||||||||||||||||||| | ||||||||| ||||| || Sbjct: 642 agttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgaccactacg 583 Query: 453 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 512 ||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 582 cgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatactcaagt 523 Query: 513 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 572 |||| ||||| ||||| ||||| |||||||| ||| |||||||||| |||||||||| Sbjct: 522 atataggtctcagaaattacctcacctgggagtttcttaggtttgcgcaacggtatgaat 463 Query: 573 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 632 || ||||| || || || || ||||| |||||||||||||| ||||| || ||||| ||| Sbjct: 462 tttgctccaattgctagtgcgatcgctgggccaaatatgaatcctctggcttcaatacct 403 Query: 633 gcgacg 638 |||||| Sbjct: 402 gcgacg 397
>gb|AY485263.1| Zea mays adenine phosphoribosyltransferase (apt1) mRNA, complete cds Length = 1202 Score = 204 bits (103), Expect = 3e-49 Identities = 298/363 (82%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 332 |||||||||||||||||||| |||||||| || || || | |||||| |||||||||||| Sbjct: 812 tatttgcgggactccaccaggatgtaaaccggtttcccgttgagcttatagaaatcctta 753 Query: 333 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 392 || ||||| || ||||||||||||||||||||| | || | |||| | || || || ||| Sbjct: 752 aatttgggaagcccaatgaggcatgcacactcagccacgttagctcctgcgcgctcgaga 693 Query: 393 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 452 ||| |||| || |||||||| |||||||| |||||||||| |||||| || ||||| || Sbjct: 692 agtcttattgcagcagaaagagttccaccagttgcaaccaaatcatcgacaaccactacg 633 Query: 453 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 512 ||||| || ||||| | || ||||||||||||||||| |||||| |||| |||||||| Sbjct: 632 cgctccccgggttcaatagctccaacatgcatctccaaacaatccatcccatactcaagt 573 Query: 513 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 572 |||| | || |||| ||||| ||||| |||||| ||||| || || |||||||| Sbjct: 572 acataactttcagaaaatacctcacctggaagcttcttaggtttacgtagtggtatgaac 513 Query: 573 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 632 || ||||| ||||| |||||||| || || ||||| ||||| ||||| || ||||||||| Sbjct: 512 tttgctcctatggctagcgcaatggctggcccaaagatgaatcctctagcttcaatgcct 453 Query: 633 gcg 635 ||| Sbjct: 452 gcg 450
>dbj|AK121982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N02, full insert sequence Length = 1954 Score = 196 bits (99), Expect = 6e-47 Identities = 213/251 (84%) Strand = Plus / Minus Query: 388 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 447 ||||||||||||| || ||| |||||||||||||||||||||| | ||||||||| |||| Sbjct: 668 caagaagttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgacca 609 Query: 448 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 507 | || ||||| |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 608 ctacgcgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatact 549 Query: 508 caagcgtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggta 567 |||| |||| ||||| ||||| ||||| |||||||| ||| |||||||||| ||||| Sbjct: 548 caagtatataggtctcagaaattacctcacctgggagtttcttaggtttgcgcaacggta 489 Query: 568 tgaatttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaa 627 ||||||| ||||| || || || || ||||| |||||||||||||| ||||| || |||| Sbjct: 488 tgaattttgctccaattgctagtgcgatcgctgggccaaatatgaatcctctggcttcaa 429 Query: 628 tgcctgcgacg 638 | ||||||||| Sbjct: 428 tacctgcgacg 418 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 332 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| |||| Sbjct: 1632 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaattctta 1573 Query: 333 aacttggggagtccaatgaggcatgcacactcaacaacatcagct 377 |||| || || ||||||||||||||||||||||| || |||||| Sbjct: 1572 tacttaggaaggccaatgaggcatgcacactcaactacgtcagct 1528
>gb|AY106749.1| Zea mays PCO120693 mRNA sequence Length = 1213 Score = 172 bits (87), Expect = 9e-40 Identities = 255/311 (81%) Strand = Plus / Minus Query: 328 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgtt 387 ||||||||||||| || ||||||||||||||||||||||| || | |||| | || || | Sbjct: 841 ccttaaacttgggaagcccaatgaggcatgcacactcaaccacgttagctcctgcgcgct 782 Query: 388 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 447 | |||||| |||| || |||||||| |||||||| |||||||||| |||||| || |||| Sbjct: 781 cgagaagtcttattgcagcagaaagagttccaccagttgcaaccaaatcatcgacaacca 722 Query: 448 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 507 | || ||||| || ||||| | || ||||||||||||||||| |||||| |||| |||| Sbjct: 721 ctacgcgctccccgggttcaatagctccaacatgcatctccaaacaatccatcccatact 662 Query: 508 caagcgtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggta 567 |||| |||| | || |||| ||||| ||||| |||||| ||||| || || |||| Sbjct: 661 caagtacataactttcagaaaatacctcacctggaagcttcttaggtttacgtagtggta 602 Query: 568 tgaatttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaa 627 |||| || ||||| ||||| |||||||| || || ||||| ||||| ||||| || |||| Sbjct: 601 tgaactttgctcctatggctagcgcaatggctggcccaaagatgaatcctctagcttcaa 542 Query: 628 tgcctgcgacg 638 ||||||||||| Sbjct: 541 tgcctgcgacg 531
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 8e-31 Identities = 132/152 (86%) Strand = Plus / Minus Query: 388 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 447 ||||||| ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || Sbjct: 24245479 caagaagccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatca 24245420 Query: 448 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 507 ||||||||| |||||||| | ||||||||||||||||| ||||||||| |||||||||| Sbjct: 24245419 gcacacgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtact 24245360 Query: 508 caagcgtataagtctcggaaatcacctcgcct 539 | || ||| ||||| ||||||||||||||| Sbjct: 24245359 cgagaacatacgtctcagaaatcacctcgcct 24245328 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 537 cctgggagcttcccgggtttgcgcagcggtatgaatttggctccgatggccagcgcaatc 596 |||||||| ||| ||| || |||| ||||||||||||||| || || |||||||| ||| Sbjct: 24244853 cctgggagtttcttgggcttacgcaacggtatgaatttggcgccaattgccagcgcgatc 24244794 Query: 597 gccgggccaaatatgaaccctctcgcctcaatgcctg 633 |||||||||||||||||||| || |||||||| |||| Sbjct: 24244793 gccgggccaaatatgaaccccctagcctcaatccctg 24244757 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcct 330 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||| Sbjct: 24247680 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcct 24247623 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Minus Query: 328 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagct 377 ||||||| || ||||| |||||||| || || ||||||||||| |||||| Sbjct: 24246671 ccttaaattttgggagcccaatgagacacgcgcactcaacaacgtcagct 24246622
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2055_H10 Length = 119290 Score = 143 bits (72), Expect = 8e-31 Identities = 132/152 (86%) Strand = Plus / Minus Query: 388 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 447 ||||||| ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || Sbjct: 45867 caagaagccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatca 45808 Query: 448 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 507 ||||||||| |||||||| | ||||||||||||||||| ||||||||| |||||||||| Sbjct: 45807 gcacacgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtact 45748 Query: 508 caagcgtataagtctcggaaatcacctcgcct 539 | || ||| ||||| ||||||||||||||| Sbjct: 45747 cgagaacatacgtctcagaaatcacctcgcct 45716 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 537 cctgggagcttcccgggtttgcgcagcggtatgaatttggctccgatggccagcgcaatc 596 |||||||| ||| ||| || |||| ||||||||||||||| || || |||||||| ||| Sbjct: 45241 cctgggagtttcttgggcttacgcaacggtatgaatttggcgccaattgccagcgcgatc 45182 Query: 597 gccgggccaaatatgaaccctctcgcctcaatgcctg 633 |||||||||||||||||||| || |||||||| |||| Sbjct: 45181 gccgggccaaatatgaaccccctagcctcaatccctg 45145 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcct 330 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||| Sbjct: 48068 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcct 48011 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Minus Query: 328 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagct 377 ||||||| || ||||| |||||||| || || ||||||||||| |||||| Sbjct: 47059 ccttaaattttgggagcccaatgagacacgcgcactcaacaacgtcagct 47010
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 388 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 447 ||||||||||||| || ||| |||||||||||||||||||||| | ||||||||| |||| Sbjct: 25879 caagaagttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgacca 25820 Query: 448 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 507 | || ||||| |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 25819 ctacgcgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatact 25760 Query: 508 caagcgtataagtctcggaaatcacctc 535 |||| |||| ||||| ||||| ||||| Sbjct: 25759 caagtatataggtctcagaaattacctc 25732 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaat 327 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 26939 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaat 26885 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 552 ggtttgcgcagcggtatgaatttggctccgatggccagcgcaatcgccgggccaaatatg 611 |||||||||| |||||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 25293 ggtttgcgcaacggtatgaattttgctccaattgctagtgcgatcgctgggccaaatatg 25234 Query: 612 aaccctctcgcctcaat 628 || ||||| || ||||| Sbjct: 25233 aatcctctggcttcaat 25217 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 328 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagct 377 ||||| |||| || || ||||||||||||||||||||||| || |||||| Sbjct: 26788 ccttatacttaggaaggccaatgaggcatgcacactcaactacgtcagct 26739
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 388 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 447 ||||||||||||| || ||| |||||||||||||||||||||| | ||||||||| |||| Sbjct: 25144212 caagaagttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgacca 25144153 Query: 448 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 507 | || ||||| |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 25144152 ctacgcgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatact 25144093 Query: 508 caagcgtataagtctcggaaatcacctc 535 |||| |||| ||||| ||||| ||||| Sbjct: 25144092 caagtatataggtctcagaaattacctc 25144065 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaat 327 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 25145272 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaat 25145218 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 552 ggtttgcgcagcggtatgaatttggctccgatggccagcgcaatcgccgggccaaatatg 611 |||||||||| |||||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 25143626 ggtttgcgcaacggtatgaattttgctccaattgctagtgcgatcgctgggccaaatatg 25143567 Query: 612 aaccctctcgcctcaat 628 || ||||| || ||||| Sbjct: 25143566 aatcctctggcttcaat 25143550 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 328 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagct 377 ||||| |||| || || ||||||||||||||||||||||| || |||||| Sbjct: 25145121 ccttatacttaggaaggccaatgaggcatgcacactcaactacgtcagct 25145072
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 388 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 447 ||||||||||||| || ||| |||||||||||||||||||||| | ||||||||| |||| Sbjct: 91639 caagaagttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgacca 91580 Query: 448 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 507 | || ||||| |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 91579 ctacgcgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatact 91520 Query: 508 caagcgtataagtctcggaaatcacctc 535 |||| |||| ||||| ||||| ||||| Sbjct: 91519 caagtatataggtctcagaaattacctc 91492 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 273 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaat 327 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 92699 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaat 92645 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 552 ggtttgcgcagcggtatgaatttggctccgatggccagcgcaatcgccgggccaaatatg 611 |||||||||| |||||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 91053 ggtttgcgcaacggtatgaattttgctccaattgctagtgcgatcgctgggccaaatatg 90994 Query: 612 aaccctctcgcctcaat 628 || ||||| || ||||| Sbjct: 90993 aatcctctggcttcaat 90977 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 328 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagct 377 ||||| |||| || || ||||||||||||||||||||||| || |||||| Sbjct: 92548 ccttatacttaggaaggccaatgaggcatgcacactcaactacgtcagct 92499
>gb|AY104264.1| Zea mays PCO144960 mRNA sequence Length = 1021 Score = 75.8 bits (38), Expect = 2e-10 Identities = 129/158 (81%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 481 gcatctccaagcaatccgtcccgtactcaagcgtataagtctcggaaatcacctcgcctg 540 ||||||||| |||||| ||||||||||| || || ||||||| |||||||| |||| Sbjct: 561 gcatctccaggcaatcagtcccgtactcgagaacgtacttctcggagatcacctcacctg 502 Query: 541 ggagcttcccgggtttgcgcagcggtatgaatttggctccgatggccagcgcaatcgccg 600 ||||||||| |||| |||||| |||||||| || || || || |||||||| ||||||| Sbjct: 501 ggagcttccttggtt-gcgcagaggtatgaacttagcgccaatagccagcgcgatcgccg 443 Query: 601 ggccaaatatgaaccctctcgcctcaatgcctgcgacg 638 |||| || | ||| || || |||||||| || |||||| Sbjct: 442 ggccgaacacgaagcccctggcctcaatcccggcgacg 405
>gb|BT016526.1| Zea mays clone Contig359 mRNA sequence Length = 527 Score = 60.0 bits (30), Expect = 9e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 346 caatgaggcatgcacactcaacaacatcagctgcggcacgttcaagaagttttatagctg 405 |||||| ||| |||||||||||||| | ||| | ||||||||| |||||| | ||||| Sbjct: 208 caatgacgcaagcacactcaacaacctttgctccaacacgttcaataagtttgacagctg 149 Query: 406 cagaaagtgttccaccggttgcaaccagatcatc 439 || | |||||||||||||| |||| |||||||| Sbjct: 148 cacagagtgttccaccggtggcaataagatcatc 115
>gb|AY104688.1| Zea mays PCO061445 mRNA sequence Length = 991 Score = 60.0 bits (30), Expect = 9e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 346 caatgaggcatgcacactcaacaacatcagctgcggcacgttcaagaagttttatagctg 405 |||||| ||| |||||||||||||| | ||| | ||||||||| |||||| | ||||| Sbjct: 635 caatgacgcaagcacactcaacaacctttgctccaacacgttcaataagtttgacagctg 576 Query: 406 cagaaagtgttccaccggttgcaaccagatcatc 439 || | |||||||||||||| |||| |||||||| Sbjct: 575 cacagagtgttccaccggtggcaataagatcatc 542
>gb|BT018097.1| Zea mays clone EL01N0552G09.c mRNA sequence Length = 1005 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 357 gcacactcaacaacatcagctgcggcacgttcaagaagttttatagctgcagaaagtgtt 416 |||||||||||||| | ||| | ||||||||| |||||| | ||||||| | |||||| Sbjct: 583 gcacactcaacaacctttgctccaacacgttcaataagtttgacagctgcacagagtgtt 524 Query: 417 ccaccggttgcaaccagatcatc 439 |||||||| |||| |||||||| Sbjct: 523 ccaccggtagcaataagatcatc 501
>gb|AY108359.1| Zea mays PCO061446 mRNA sequence Length = 974 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 357 gcacactcaacaacatcagctgcggcacgttcaagaagttttatagctgcagaaagtgtt 416 |||||||||||||| | ||| | ||||||||| |||||| | ||||||| | |||||| Sbjct: 585 gcacactcaacaacctttgctccaacacgttcaataagtttgacagctgcacatagtgtt 526 Query: 417 ccaccggttgcaaccagatcatc 439 |||||||| |||| |||||||| Sbjct: 525 ccaccggtagcaataagatcatc 503
>gb|AC109587.2| Homo sapiens chromosome 3 clone CTD-2013N24, complete sequence Length = 156614 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 171 acagtgtactgcagacttatcaat 194 |||||||||||||||||||||||| Sbjct: 22949 acagtgtactgcagacttatcaat 22972
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Plus Query: 388 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccac 445 |||||||||| | ||||||| | ||||||||||| || |||| |||||||| ||||| Sbjct: 44180 caagaagtttgacagctgcacagagtgttccaccagtggcaataagatcatcgaccac 44237 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 atcatcatcatttcattttt 272 |||||||||||||||||||| Sbjct: 38851 atcatcatcatttcattttt 38870
>emb|Y18250.1|MTY18250 Medicago truncatula mRNA for MtN30 gene, partial Length = 739 Score = 44.1 bits (22), Expect = 0.56 Identities = 61/74 (82%) Strand = Plus / Minus Query: 414 gttccaccggttgcaaccagatcatcaaccaccaccacacgctcgccaggttcgacggcg 473 |||||||| ||||||| || |||||||||||| | |||| || |||| ||| || || Sbjct: 281 gttccaccagttgcaatcaaatcatcaaccacaatagcacgttcaccagtttcaacagct 222 Query: 474 ccaacatgcatctc 487 |||||||||||||| Sbjct: 221 ccaacatgcatctc 208
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 ctcgccaggttcgacggcgcc 475 ||||||||||||||||||||| Sbjct: 267750 ctcgccaggttcgacggcgcc 267730
>gb|AC078793.13| Homo sapiens 3 BAC RP11-693A13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152829 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 ggaaaaactagtgctaggaagacta 113 ||||||||||||||||| ||||||| Sbjct: 140611 ggaaaaactagtgctagaaagacta 140635
>gb|AY190940.1| Drosophila erecta clone DERF01_19_N16 (D1428) genomic sequence Length = 43180 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 260 tcatttcattttttatttgcgggac 284 |||||||||||| |||||||||||| Sbjct: 8867 tcatttcattttctatttgcgggac 8843
>emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 in linkage group 19, complete sequence Length = 182182 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 tcatcatttcattttttattt 277 ||||||||||||||||||||| Sbjct: 18946 tcatcatttcattttttattt 18926
>dbj|AK114050.1| Ciona intestinalis cDNA, clone:cicl025h11, full insert sequence Length = 1192 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 atcatttcattttttatttgc 279 ||||||||||||||||||||| Sbjct: 872 atcatttcattttttatttgc 892
>ref|NM_001036079.1| Arabidopsis thaliana clathrin binding AT1G48760 transcript variant AT1G48760.3 mRNA, complete cds Length = 3367 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 2990 atcaatcatcatcacttcatttattatt 3017
>ref|NM_103771.2| Arabidopsis thaliana clathrin binding AT1G48760 transcript variant AT1G48760.1 mRNA, complete cds Length = 3383 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 2990 atcaatcatcatcacttcatttattatt 3017
>ref|NM_179454.1| Arabidopsis thaliana clathrin binding AT1G48760 transcript variant AT1G48760.2 mRNA, complete cds Length = 3439 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 2990 atcaatcatcatcacttcatttattatt 3017
>ref|NM_103770.1| Arabidopsis thaliana lipid binding AT1G48750 mRNA, complete cds Length = 525 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 450 atcaatcatcatcacttcatttattatt 423
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ggcacgttcaagaagtttta 399 |||||||||||||||||||| Sbjct: 2908047 ggcacgttcaagaagtttta 2908028
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ggcacgttcaagaagtttta 399 |||||||||||||||||||| Sbjct: 2908258 ggcacgttcaagaagtttta 2908239
>gb|AY658709.1| Synthetic construct Peudomonas aeruginosa clone FLH034660.01F PA2023 gene, partial cds Length = 840 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 tcgccaggttcgacggcgcc 475 |||||||||||||||||||| Sbjct: 607 tcgccaggttcgacggcgcc 588
>gb|AC166251.6| Mus musculus BAC RP23-298H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187073 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 tacaaagctctcatcaaatactct 82 ||||||||||||||||||| |||| Sbjct: 78826 tacaaagctctcatcaaatgctct 78849
>ref|XM_653301.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0789.2), mRNA Length = 1290 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cgccaggttcgacggcgcca 476 |||||||||||||||||||| Sbjct: 1155 cgccaggttcgacggcgcca 1136
>gb|AC155732.21| Mus musculus 6 BAC RP24-235I13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 165822 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 tacaaagctctcatcaaatactct 82 ||||||||||||||||||| |||| Sbjct: 37791 tacaaagctctcatcaaatgctct 37814
>gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, complete sequence Length = 215696 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 204102 tcatcatttcattttttatt 204121
>gb|AY458636.1| Uncultured bacterium 439 clone EBAC750-10B11 genomic sequence Length = 39858 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 agaaagtgttccaccggttg 426 |||||||||||||||||||| Sbjct: 19538 agaaagtgttccaccggttg 19557
>gb|AC129592.5| Mus musculus BAC clone RP24-86A6 from chromosome 3, complete sequence Length = 186218 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 catcatcatttcattttttatttg 278 ||||||||||||||||||| |||| Sbjct: 70353 catcatcatttcattttttttttg 70330
>emb|BX511265.13| Zebrafish DNA sequence from clone RP71-45G20 in linkage group 9, complete sequence Length = 183988 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gcaaatgaatgaagctgtca 237 |||||||||||||||||||| Sbjct: 6600 gcaaatgaatgaagctgtca 6619
>emb|CR664537.2|CNS0FBQ7 Tetraodon nigroviridis full-length cDNA Length = 1673 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cattttttatttgcgggact 285 |||||||||||||||||||| Sbjct: 887 cattttttatttgcgggact 906
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 tcatcatcatttcattttttattt 277 |||||||||||| ||||||||||| Sbjct: 488020 tcatcatcatttgattttttattt 488043
>gb|AY045879.1| Arabidopsis thaliana putative lipid transfer protein (At1g48750) mRNA, complete cds Length = 541 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 450 atcaatcatcatcacttcatttattatt 423
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 1648925 tcatcatttcattttttatt 1648906
>emb|AJ010734.1|PAAJ10734 Pseudomonas aeruginosa PAO1 ugd, galU, genes and partial gor gene Length = 3224 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 tcgccaggttcgacggcgcc 475 |||||||||||||||||||| Sbjct: 2241 tcgccaggttcgacggcgcc 2222
>gb|AC013562.6| Homo sapiens chromosome 8, clone RP11-313C15, complete sequence Length = 188755 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 aaaaactagtgctaggaaga 110 |||||||||||||||||||| Sbjct: 145963 aaaaactagtgctaggaaga 145982
>emb|BX004803.11| Zebrafish DNA sequence from clone CH211-119C20 in linkage group 20 Contains a novel gene simialr to human and mouse CASKIN2 (CASK interacting protein 2), a novel gene for a nucleoside-diphosphate kinase (wu:fk59e05) and a CpG island, complete sequence Length = 167376 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 atcatcatcatttcattttt 272 |||||||||||||||||||| Sbjct: 32853 atcatcatcatttcattttt 32834
>gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete sequence Length = 134892 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tcatcatcatttcatttttt 273 |||||||||||||||||||| Sbjct: 23123 tcatcatcatttcatttttt 23142
>emb|AL670865.8| Mouse DNA sequence from clone RP23-395J4 on chromosome 4, complete sequence Length = 112907 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 atcatttcattttttatttg 278 |||||||||||||||||||| Sbjct: 94397 atcatttcattttttatttg 94378
>gb|AC106716.3| Homo sapiens 3 BAC RP11-202P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152883 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 aagctctcatcaaatactct 82 |||||||||||||||||||| Sbjct: 39367 aagctctcatcaaatactct 39348
>emb|CR478232.3| Zebrafish DNA sequence from clone CH211-86D22 in linkage group 20, complete sequence Length = 27408 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 atcatcatcatttcattttt 272 |||||||||||||||||||| Sbjct: 26929 atcatcatcatttcattttt 26948
>gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence Length = 179810 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 atcatttcattttttatttg 278 |||||||||||||||||||| Sbjct: 29232 atcatttcattttttatttg 29213
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 1700033 tcatcatttcattttttatt 1700014
>gb|AY587160.1| Sesamia nonagrioides clone Sn16 trypsin IIb precursor (TrIIb) mRNA, partial cds Length = 661 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 caaccagatcatcaaccacc 446 |||||||||||||||||||| Sbjct: 305 caaccagatcatcaaccacc 324
>gb|AY587159.1| Sesamia nonagrioides clone Sn15 trypsin IIb precursor (TrIIb) mRNA, complete cds Length = 874 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 caaccagatcatcaaccacc 446 |||||||||||||||||||| Sbjct: 291 caaccagatcatcaaccacc 310
>gb|AY587158.1| Sesamia nonagrioides clone Sn14 trypsin IIb precursor (TrIIb) mRNA, partial cds Length = 673 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 caaccagatcatcaaccacc 446 |||||||||||||||||||| Sbjct: 317 caaccagatcatcaaccacc 336
>gb|AY587157.1| Sesamia nonagrioides clone Sn13 trypsin IIb (TrIIb) mRNA, partial cds Length = 801 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 caaccagatcatcaaccacc 446 |||||||||||||||||||| Sbjct: 222 caaccagatcatcaaccacc 241
>gb|AY587147.1| Sesamia nonagrioides clone Sn18 trypsin IIb3 precursor (TrIIb3) gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 caaccagatcatcaaccacc 446 |||||||||||||||||||| Sbjct: 578 caaccagatcatcaaccacc 597
>gb|AY587145.1| Sesamia nonagrioides clone Sn12 trypsin IIb precursor (TrIIb) gene, complete cds Length = 1028 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 caaccagatcatcaaccacc 446 |||||||||||||||||||| Sbjct: 472 caaccagatcatcaaccacc 491
>gb|AC090735.5| Homo sapiens chromosome 8, clone RP11-1145L24, complete sequence Length = 149089 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 aaaaactagtgctaggaaga 110 |||||||||||||||||||| Sbjct: 115736 aaaaactagtgctaggaaga 115717
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 1676678 tcatcatttcattttttatt 1676659
>emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 in linkage group 6, complete sequence Length = 148605 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 101113 tcatcatttcattttttatt 101132
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 1602718 tcatcatttcattttttatt 1602699
>emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, complete sequence Length = 127643 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 79470 tcatcatttcattttttatt 79489
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 1699515 tcatcatttcattttttatt 1699496
>gb|AC142264.6| Mus musculus BAC clone RP24-394K17 from chromosome 6, complete sequence Length = 162570 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 138622 tcatcatttcattttttatt 138603
>emb|BX817924.1|CNS0AE66 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL50ZE08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 531 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 437 atcaatcatcatcacttcatttattatt 410
>emb|BX814440.1|CNS0AEB5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 513 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 432 atcaatcatcatcacttcatttattatt 405
>emb|BX813404.1|CNS0AEAG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZE11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 453 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 412 atcaatcatcatcacttcatttattatt 385
>emb|BX813353.1|CNS0AEBD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 490 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 430 atcaatcatcatcacttcatttattatt 403
>emb|BX818607.1|CNS0AE4U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 513 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 433 atcaatcatcatcacttcatttattatt 406
>gb|AC073555.9|AC073555 Arabidopsis thaliana chromosome 1 BAC F11I4 genomic sequence, complete sequence Length = 80561 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 atcaatcatcatcatttcattttttatt 276 |||||||||||||| ||||||| ||||| Sbjct: 25628 atcaatcatcatcacttcatttattatt 25655
>gb|AE004628.1| Pseudomonas aeruginosa PAO1, section 189 of 529 of the complete genome Length = 10962 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 tcgccaggttcgacggcgcc 475 |||||||||||||||||||| Sbjct: 10610 tcgccaggttcgacggcgcc 10591
>gb|AC067719.12| Homo sapiens 3 BAC RP11-183L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172945 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcatttcattttttattt 277 |||||||||||||||||||| Sbjct: 8337 catcatttcattttttattt 8356
>gb|AC117471.6| Homo sapiens 3 BAC RP11-558J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 82165 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 atgaagctgtcatcctttct 245 |||||||||||||||||||| Sbjct: 74980 atgaagctgtcatcctttct 74999
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 1669273 tcatcatttcattttttatt 1669254
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 1623622 tcatcatttcattttttatt 1623603
>emb|BX470205.12| Zebrafish DNA sequence from clone DKEYP-118B7 in linkage group 9, complete sequence Length = 41140 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gcaaatgaatgaagctgtca 237 |||||||||||||||||||| Sbjct: 20353 gcaaatgaatgaagctgtca 20372
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tcatcatttcattttttatt 276 |||||||||||||||||||| Sbjct: 1734312 tcatcatttcattttttatt 1734293
>emb|AL954834.12| Zebrafish DNA sequence from clone CH211-286D20, complete sequence Length = 187914 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 atcatcatcatttcattttt 272 |||||||||||||||||||| Sbjct: 19757 atcatcatcatttcattttt 19776
>gb|AC140358.2| Mus musculus BAC clone RP24-234L7 from 3, complete sequence Length = 160295 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 catcatcatttcattttttatttg 278 ||||||||||||||||||| |||| Sbjct: 123055 catcatcatttcattttttttttg 123032 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,592,429 Number of Sequences: 3902068 Number of extensions: 6592429 Number of successful extensions: 122122 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121571 Number of HSP's gapped (non-prelim): 532 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)