>emb|X78877.1|HVACXPII3 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-3
          Length = 1979

 Score =  583 bits (294), Expect = e-163
 Identities = 322/332 (96%), Gaps = 1/332 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttgcaacatgccattttggcatagcatgttcatacttaacaaattacaccatacactttc 60
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1875 ttgcaacatgccattttggcatag-atgttcatacttaacaaattacaccatacactttc 1817

                                                                        
Query: 61   ctatntatatgaaagcntttgctgacctgcagttgcatggtctgcggagtgcatgggttg 120
            |||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1816 ctatctatatgaaagcatttgctgacctgcagttacatggcctgcggagtgcatgggttg 1757

                                                                        
Query: 121  atgatgggtttctgtatctaactttacttgattttgcttgtttcttgtnctgaatcaaat 180
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1756 atgatgggtttctgtatctaactttacttgattttgcttgtttcttgtactgaatcaaat 1697

                                                                        
Query: 181  gatacaacctgtgaaacctgntggtgtactatcttttagngtaaaaccttattttctttt 240
            |||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||
Sbjct: 1696 gatacaacctgtgaaacctgctggtgtactatcttttagtgtaaaaccttcttttctttt 1637

                                                                        
Query: 241  gctaatcctgntcgcattctttgcagtcagggagcgctttgcctgcgaggaaattctgga 300
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1636 gctaatcctgttcgcattctttgcagtcagggagcgctttgcctgcgaggaaattctgga 1577

                                            
Query: 301  caagcacaagcgctcgccgcggctggtagctg 332
            ||||||||||||||||||||||||||||||||
Sbjct: 1576 caagcacaagcgctcgccgcggctggtagctg 1545

>ref|NM_185973.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1575

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  tcagggagcgctttgcctgcgaggaaattctggacaagcacaagcgctcgccgcggctgg 326
            ||||| |||| ||||||| | ||||||| |||||||||||||||||||||| | ||||||
Sbjct: 1550 tcaggtagcgttttgccttcaaggaaatactggacaagcacaagcgctcgctgtggctgg 1491

                  
Query: 327  tagctg 332
            ||||||
Sbjct: 1490 tagctg 1485

>gb|AY224473.1| Oryza sativa (japonica cultivar-group) isolate 29039 serine
            carboxypepsidase mRNA, partial cds
          Length = 1338

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  tcagggagcgctttgcctgcgaggaaattctggacaagcacaagcgctcgccgcggctgg 326
            ||||| |||| ||||||| | ||||||| |||||||||||||||||||||| | ||||||
Sbjct: 1313 tcaggtagcgttttgccttcaaggaaatactggacaagcacaagcgctcgctgtggctgg 1254

                  
Query: 327  tagctg 332
            ||||||
Sbjct: 1253 tagctg 1248

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                            
Query: 267      tcagggagcgctttgcctgcgaggaaattctggacaagcacaagcgctcgccgcggctgg 326
                ||||| |||| ||||||| | ||||||| |||||||||||||||||||||| | ||||||
Sbjct: 27585606 tcaggtagcgttttgccttcaaggaaatactggacaagcacaagcgctcgctgtggctgg 27585665

                      
Query: 327      tagctg 332
                ||||||
Sbjct: 27585666 tagctg 27585671

>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0047B07
          Length = 157797

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                         
Query: 267   tcagggagcgctttgcctgcgaggaaattctggacaagcacaagcgctcgccgcggctgg 326
             ||||| |||| ||||||| | ||||||| |||||||||||||||||||||| | ||||||
Sbjct: 42599 tcaggtagcgttttgccttcaaggaaatactggacaagcacaagcgctcgctgtggctgg 42658

                   
Query: 327   tagctg 332
             ||||||
Sbjct: 42659 tagctg 42664

>gb|AY108013.1| Zea mays PCO089815 mRNA sequence
          Length = 453

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                       
Query: 260 tttgcagtcagggagcgctttgcctgcgaggaaattctggacaagcacaagcgctcgccg 319
           ||||||| |||| |||| ||||||||| ||||||  |||||||||||| |||||||||| 
Sbjct: 312 tttgcagccaggaagcgttttgcctgcaaggaaaccctggacaagcacgagcgctcgcct 253

                        
Query: 320 cggctggtagctg 332
            ||||||||||||
Sbjct: 252 tggctggtagctg 240

>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0013J21, complete sequence
          Length = 155290

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   cttgattttgcttgtttctt 166
             ||||||||||||||||||||
Sbjct: 69068 cttgattttgcttgtttctt 69049

>gb|AY567487.2| Human Coronavirus NL63, complete genome
          Length = 27553

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 140   aactttacttgattttgcttgttt 163
             |||||| |||||||||||||||||
Sbjct: 20476 aacttttcttgattttgcttgttt 20499

>emb|AL500527.19| Human DNA sequence from clone RP11-302K17 on chromosome 10 Contains the
              gene for  Hermansky-Pudlak syndrome-6 protein (HPS6), two
              pseudogenes for  transcription elongation factor B (SIII),
              polypeptide 1, the LDB1 gene for LIM domain binding 1, a
              novel gene (KIAA0595), the NOLC1 gene for nucleolar and
              coiled-body phosphoprotein 1 and five CpG islands, complete
              sequence
          Length = 158434

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      tgcaacatgccattttggca 21
              ||||||||||||||||||||
Sbjct: 109835 tgcaacatgccattttggca 109854

>emb|AL162720.8| Human DNA sequence from clone RP1-132N8 on chromosome 6 Contains a
             pseudogene of the likely ortholog of mouse suppressors of
             cytokine signalling 5 (SOCS5, CIS6, CISH6, KIAA0761),
             complete sequence
          Length = 57355

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tgattttgcttgtttcttgt 168
             ||||||||||||||||||||
Sbjct: 28712 tgattttgcttgtttcttgt 28731

>emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 on chromosome 20q11.2 Contains
             a novel gene, complete sequence
          Length = 161888

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   tctaactttacttgattttgcttg 160
             ||||||||||||||||| ||||||
Sbjct: 23159 tctaactttacttgattctgcttg 23182

>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ttacttgattttgcttgttt 163
              ||||||||||||||||||||
Sbjct: 487174 ttacttgattttgcttgttt 487155

>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     cttgattttgcttgtttctt 166
               ||||||||||||||||||||
Sbjct: 2090928 cttgattttgcttgtttctt 2090909

>gb|AC017068.7| Homo sapiens BAC clone RP11-380D23 from 4, complete sequence
          Length = 201627

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     catgccattttggcatagca 26
             ||||||||||||||||||||
Sbjct: 32379 catgccattttggcatagca 32398

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     cttgattttgcttgtttctt 166
               ||||||||||||||||||||
Sbjct: 2090928 cttgattttgcttgtttctt 2090909

>gb|AY697420.1| Human coronavirus NL63 strain Amsterdam 1 spike protein (S) mRNA,
           partial cds
          Length = 287

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 140 aactttacttgattttgcttgttt 163
           |||||| |||||||||||||||||
Sbjct: 73  aacttttcttgattttgcttgttt 96

>gb|AY902242.1| Human coronavirus NL63 isolate SWE 10614/2004 spike protein gene,
           partial cds
          Length = 586

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 140 aactttacttgattttgcttgttt 163
           |||||| |||||||||||||||||
Sbjct: 43  aacttttcttgattttgcttgttt 66

>gb|AC091888.3| Homo sapiens chromosome 5 clone RP11-11K15, complete sequence
          Length = 151453

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   gtaaaaccttattttctttt 240
             ||||||||||||||||||||
Sbjct: 73720 gtaaaaccttattttctttt 73701

>gb|AC008928.6|AC008928 Homo sapiens chromosome 5 clone CTD-2288H1, complete sequence
          Length = 110297

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   gtaaaaccttattttctttt 240
             ||||||||||||||||||||
Sbjct: 94663 gtaaaaccttattttctttt 94682

>gb|AY758301.1| Human coronavirus NL63 strain BE03-64880 spike protein gene,
           partial cds
          Length = 614

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 140 aactttacttgattttgcttgttt 163
           |||||| |||||||||||||||||
Sbjct: 40  aacttttcttgattttgcttgttt 63

>gb|AY758298.1| Human coronavirus NL63 strain BE03-21596 spike protein gene,
           partial cds
          Length = 614

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 140 aactttacttgattttgcttgttt 163
           |||||| |||||||||||||||||
Sbjct: 40  aacttttcttgattttgcttgttt 63

>gb|AY758297.1| Human coronavirus NL63 strain BE03-1153 spike protein gene, partial
           cds
          Length = 614

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 140 aactttacttgattttgcttgttt 163
           |||||| |||||||||||||||||
Sbjct: 40  aacttttcttgattttgcttgttt 63

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     cttgattttgcttgtttctt 166
               ||||||||||||||||||||
Sbjct: 2090879 cttgattttgcttgtttctt 2090860

>emb|AL671215.4| Mouse DNA sequence from clone RP23-277C18 on chromosome X, complete
              sequence
          Length = 182633

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    gtcagggagcgctttgcctg 285
              ||||||||||||||||||||
Sbjct: 175316 gtcagggagcgctttgcctg 175335


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,910,472
Number of Sequences: 3902068
Number of extensions: 2910472
Number of successful extensions: 59954
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59754
Number of HSP's gapped (non-prelim): 199
length of query: 334
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 312
effective length of database: 17,147,199,772
effective search space: 5349926328864
effective search space used: 5349926328864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)