>Y4105_ARATH (Q9M158) Putative protein At4g01050|
          Length = 466

 Score = 36.2 bits (82), Expect = 0.090
 Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
 Frame = -3

Query: 390 VTESPPVEVNSAPVAEAV------EESLPPAKPRPLSPYANYPDLK 271
           V E  PV    A VA  V       E+ P    RPLSPYA+YPDLK
Sbjct: 411 VPEPVPVPAIEAAVAAQVITEPTETEAKPKPHSRPLSPYASYPDLK 456



 Score = 30.8 bits (68), Expect = 3.8
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -3

Query: 495 SRPLSPFANYPDLK 454
           SRPLSP+A+YPDLK
Sbjct: 443 SRPLSPYASYPDLK 456

>K2C6B_HUMAN (P04259) Keratin, type II cytoskeletal 6B (Cytokeratin-6B) (CK 6B)|
           (K6b keratin)
          Length = 563

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 20/42 (47%), Positives = 24/42 (57%)
 Frame = +2

Query: 287 FAYGERGLGFAGGNDSSTASATGAELTSTGGDSVTATSAFTS 412
           ++YG  GLG  GG  SS+  ATG  L+S GG S T     TS
Sbjct: 514 YSYGS-GLGVGGGFSSSSGRATGGGLSSVGGGSSTIKYTTTS 554

>K2C6E_HUMAN (P48668) Keratin, type II cytoskeletal 6E (Cytokeratin-6E) (CK 6E)|
           (K6e keratin) (Keratin K6h)
          Length = 563

 Score = 33.5 bits (75), Expect = 0.58
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +2

Query: 287 FAYGERGLGFAGGNDSSTASATGAELTSTGGDSVTATSAFTS 412
           ++YG  GLG  GG  SS+  A G  L+S GG S T     TS
Sbjct: 514 YSYGS-GLGIGGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTS 554

>K2C6C_HUMAN (P48666) Keratin, type II cytoskeletal 6C (Cytokeratin-6C) (CK 6C)|
           (K6c keratin)
          Length = 563

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +2

Query: 287 FAYGERGLGFAGGNDSSTASATGAELTSTGGDSVTATSAFTS 412
           ++YG  GLG  GG  SS+  A G  L+S GG S T     TS
Sbjct: 514 YSYGS-GLGVGGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTS 554

>K2C6A_HUMAN (P02538) Keratin, type II cytoskeletal 6A (Cytokeratin-6A) (CK 6A)|
           (K6a keratin)
          Length = 563

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +2

Query: 287 FAYGERGLGFAGGNDSSTASATGAELTSTGGDSVTATSAFTS 412
           ++YG  GLG  GG  SS+  A G  L+S GG S T     TS
Sbjct: 514 YSYGS-GLGVGGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTS 554

>K2C6D_HUMAN (P48667) Keratin, type II cytoskeletal 6D (Cytokeratin-6D) (CK 6D)|
           (K6d keratin) (Fragment)
          Length = 384

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +2

Query: 287 FAYGERGLGFAGGNDSSTASATGAELTSTGGDSVTATSAFTS 412
           ++YG  GLG  GG  SS+  A G  L+S GG S T     TS
Sbjct: 335 YSYGS-GLGVGGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTS 375

>SALL1_HUMAN (Q9NSC2) Sal-like protein 1 (Zinc finger protein SALL1) (Spalt-like|
           transcription factor 1) (HSal1)
          Length = 1324

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +2

Query: 305 GLGFAGGNDSSTASATGAELTST---GGDSVTATSAFTSVLP 421
           G G + G+ SSTA ++ +  +S+   GG S T TSA T+ LP
Sbjct: 136 GSGTSSGSHSSTAPSSSSSSSSSSGGGGSSSTGTSAITTSLP 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,770,990
Number of Sequences: 219361
Number of extensions: 1274024
Number of successful extensions: 3898
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3891
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)