ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal10c24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Minus Query: 307 gatgtcctcatgatccttagcctcttcacggagccaacaaacatttcccaagggacgtct 366 ||||||||||||||||| | ||||||||| |||| ||||||||||||||||| || ||| Sbjct: 892 gatgtcctcatgatcctcaacctcttcacagagctgacaaacatttcccaaggaacatct 833 Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgtcatctggtattcagaagagttg 426 ||||| ||||||||||||||||||||||| || || || | ||||||||| | ||||||| Sbjct: 832 ccaacgagcatccagtcaccatccctgtcctcgtaggtgagctggtattcggcagagttg 773 Query: 427 tctaacagcttcaaggacttcgtaccattagaagcgcaaaggccggcggacggcttggtg 486 |||| || |||| || || ||| || ||||||||||||||| ||||||||| ||| Sbjct: 772 tctagtagtttcagcgagtttgtattatgagaagcgcaaaggccaatggacggcttcgtg 713 Query: 487 aacatgatctcaagggccaaggcaagggtcttgtacgagcggtgggcgttgaggtccacc 546 ||||||| |||||||| || |||||||||||||| |||||||| || ||||| |||||| Sbjct: 712 aacatgagttcaagggctaatgcaagggtcttgtatgagcggtgcgcattgagatccacc 653 Query: 547 ttcctcccaatgacctccccatccatgttcaccttca 583 ||||| ||||||||||| ||||||||||||||||||| Sbjct: 652 ttccttccaatgacctctccatccatgttcaccttca 616
>ref|XM_468410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1175 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Minus Query: 307 gatgtcctcatgatccttagcctcttcacggagccaacaaacatttcccaagggacgtct 366 ||||||||||||||||| | ||||||||| |||| ||||||||||||||||| || ||| Sbjct: 853 gatgtcctcatgatcctcaacctcttcacagagctgacaaacatttcccaaggaacatct 794 Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgtcatctggtattcagaagagttg 426 ||||| ||||||||||||||||||||||| || || || | ||||||||| | ||||||| Sbjct: 793 ccaacgagcatccagtcaccatccctgtcctcgtaggtgagctggtattcggcagagttg 734 Query: 427 tctaacagcttcaaggacttcgtaccattagaagcgcaaaggccggcggacggcttggtg 486 |||| || |||| || || ||| || ||||||||||||||| ||||||||| ||| Sbjct: 733 tctagtagtttcagcgagtttgtattatgagaagcgcaaaggccaatggacggcttcgtg 674 Query: 487 aacatgatctcaagggccaaggcaagggtcttgtacgagcggtgggcgttgaggtccacc 546 ||||||| |||||||| || |||||||||||||| |||||||| || ||||| |||||| Sbjct: 673 aacatgagttcaagggctaatgcaagggtcttgtatgagcggtgcgcattgagatccacc 614 Query: 547 ttcctcccaatgacctccccatccatgttcaccttca 583 ||||| ||||||||||| ||||||||||||||||||| Sbjct: 613 ttccttccaatgacctctccatccatgttcaccttca 577
>ref|XM_468411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1180 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Minus Query: 307 gatgtcctcatgatccttagcctcttcacggagccaacaaacatttcccaagggacgtct 366 ||||||||||||||||| | ||||||||| |||| ||||||||||||||||| || ||| Sbjct: 858 gatgtcctcatgatcctcaacctcttcacagagctgacaaacatttcccaaggaacatct 799 Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgtcatctggtattcagaagagttg 426 ||||| ||||||||||||||||||||||| || || || | ||||||||| | ||||||| Sbjct: 798 ccaacgagcatccagtcaccatccctgtcctcgtaggtgagctggtattcggcagagttg 739 Query: 427 tctaacagcttcaaggacttcgtaccattagaagcgcaaaggccggcggacggcttggtg 486 |||| || |||| || || ||| || ||||||||||||||| ||||||||| ||| Sbjct: 738 tctagtagtttcagcgagtttgtattatgagaagcgcaaaggccaatggacggcttcgtg 679 Query: 487 aacatgatctcaagggccaaggcaagggtcttgtacgagcggtgggcgttgaggtccacc 546 ||||||| |||||||| || |||||||||||||| |||||||| || ||||| |||||| Sbjct: 678 aacatgagttcaagggctaatgcaagggtcttgtatgagcggtgcgcattgagatccacc 619 Query: 547 ttcctcccaatgacctccccatccatgttcaccttca 583 ||||| ||||||||||| ||||||||||||||||||| Sbjct: 618 ttccttccaatgacctctccatccatgttcaccttca 582
>dbj|AK104802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C05, full insert sequence Length = 1175 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Minus Query: 307 gatgtcctcatgatccttagcctcttcacggagccaacaaacatttcccaagggacgtct 366 ||||||||||||||||| | ||||||||| |||| ||||||||||||||||| || ||| Sbjct: 853 gatgtcctcatgatcctcaacctcttcacagagctgacaaacatttcccaaggaacatct 794 Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgtcatctggtattcagaagagttg 426 ||||| ||||||||||||||||||||||| || || || | ||||||||| | ||||||| Sbjct: 793 ccaacgagcatccagtcaccatccctgtcctcgtaggtgagctggtattcggcagagttg 734 Query: 427 tctaacagcttcaaggacttcgtaccattagaagcgcaaaggccggcggacggcttggtg 486 |||| || |||| || || ||| || ||||||||||||||| ||||||||| ||| Sbjct: 733 tctagtagtttcagcgagtttgtattatgagaagcgcaaaggccaatggacggcttcgtg 674 Query: 487 aacatgatctcaagggccaaggcaagggtcttgtacgagcggtgggcgttgaggtccacc 546 ||||||| |||||||| || |||||||||||||| |||||||| || ||||| |||||| Sbjct: 673 aacatgagttcaagggctaatgcaagggtcttgtatgagcggtgcgcattgagatccacc 614 Query: 547 ttcctcccaatgacctccccatccatgttcaccttca 583 ||||| ||||||||||| ||||||||||||||||||| Sbjct: 613 ttccttccaatgacctctccatccatgttcaccttca 577
>dbj|AK104501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E07, full insert sequence Length = 1180 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Minus Query: 307 gatgtcctcatgatccttagcctcttcacggagccaacaaacatttcccaagggacgtct 366 ||||||||||||||||| | ||||||||| |||| ||||||||||||||||| || ||| Sbjct: 858 gatgtcctcatgatcctcaacctcttcacagagctgacaaacatttcccaaggaacatct 799 Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgtcatctggtattcagaagagttg 426 ||||| ||||||||||||||||||||||| || || || | ||||||||| | ||||||| Sbjct: 798 ccaacgagcatccagtcaccatccctgtcctcgtaggtgagctggtattcggcagagttg 739 Query: 427 tctaacagcttcaaggacttcgtaccattagaagcgcaaaggccggcggacggcttggtg 486 |||| || |||| || || ||| || ||||||||||||||| ||||||||| ||| Sbjct: 738 tctagtagtttcagcgagtttgtattatgagaagcgcaaaggccaatggacggcttcgtg 679 Query: 487 aacatgatctcaagggccaaggcaagggtcttgtacgagcggtgggcgttgaggtccacc 546 ||||||| |||||||| || |||||||||||||| |||||||| || ||||| |||||| Sbjct: 678 aacatgagttcaagggctaatgcaagggtcttgtatgagcggtgcgcattgagatccacc 619 Query: 547 ttcctcccaatgacctccccatccatgttcaccttca 583 ||||| ||||||||||| ||||||||||||||||||| Sbjct: 618 ttccttccaatgacctctccatccatgttcaccttca 582
>dbj|AK069892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N11, full insert sequence Length = 1298 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Minus Query: 307 gatgtcctcatgatccttagcctcttcacggagccaacaaacatttcccaagggacgtct 366 ||||||||||||||||| | ||||||||| |||| ||||||||||||||||| || ||| Sbjct: 892 gatgtcctcatgatcctcaacctcttcacagagctgacaaacatttcccaaggaacatct 833 Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgtcatctggtattcagaagagttg 426 ||||| ||||||||||||||||||||||| || || || | ||||||||| | ||||||| Sbjct: 832 ccaacgagcatccagtcaccatccctgtcctcgtaggtgagctggtattcggcagagttg 773 Query: 427 tctaacagcttcaaggacttcgtaccattagaagcgcaaaggccggcggacggcttggtg 486 |||| || |||| || || ||| || ||||||||||||||| ||||||||| ||| Sbjct: 772 tctagtagtttcagcgagtttgtattatgagaagcgcaaaggccaatggacggcttcgtg 713 Query: 487 aacatgatctcaagggccaaggcaagggtcttgtacgagcggtgggcgttgaggtccacc 546 ||||||| |||||||| || |||||||||||||| |||||||| || ||||| |||||| Sbjct: 712 aacatgagttcaagggctaatgcaagggtcttgtatgagcggtgcgcattgagatccacc 653 Query: 547 ttcctcccaatgacctccccatccatgttcaccttca 583 ||||| ||||||||||| ||||||||||||||||||| Sbjct: 652 ttccttccaatgacctctccatccatgttcaccttca 616
>emb|AJ748648.1| Oryza sativa (indica cultivar-group) mRNA for indoleacetic acid-inducible protein homologue Length = 882 Score = 192 bits (97), Expect = 9e-46 Identities = 231/277 (83%), Gaps = 9/277 (3%) Strand = Plus / Minus Query: 307 gatgtcctcatgatccttagcctcttcacggagccaacaaacatttcccaagggacgtct 366 ||||||||||||||||| | ||||||||| |||| ||||||||||||||||| || ||| Sbjct: 759 gatgtcctcatgatcctcaacctcttcacagagctgacaaacatttcccaaggaacatct 700 Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgtcatctggtattcagaagagttg 426 ||||| ||||||||||||||||||||||| || || || | ||||||||| | ||||||| Sbjct: 699 ccaacgagcatccagtcaccatccctgtcctcgtaggtgagctggtattcggcagagttg 640 Query: 427 tctaacagcttcaaggacttcgtaccattagaagcgcaaaggccggcggacggcttggtg 486 |||| || |||| ||||| ||| || ||||||||||||||| ||||||||| ||| Sbjct: 639 tctagtagtttcagcgactttgtattatgagaagcgcaaaggccaatggacggcttcgtg 580 Query: 487 aacatgatctcaagggccaaggcaagggtcttgtacgagcggtgggcgttgaggtccacc 546 ||||||| |||||||| || |||||||||||||| |||||||| || ||| Sbjct: 579 aacatgagttcaagggctaatgcaagggtcttgtatgagcggtgcgcattg--------- 529 Query: 547 ttcctcccaatgacctccccatccatgttcaccttca 583 ||||| ||||||||||| ||||||||||||||||||| Sbjct: 528 ttccttccaatgacctctccatccatgttcaccttca 492
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 7e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 456 agaagcgcaaaggccggcggacggcttggtgaacatgatctcaagggccaaggcaagggt 515 ||||||||||||||| ||||||||| |||||||||| |||||||| || |||||||| Sbjct: 35093015 agaagcgcaaaggccaatggacggcttcgtgaacatgagttcaagggctaatgcaagggt 35093074 Query: 516 cttgtacgagcggtgggcgttgaggtccaccttcctcccaatgacctccccatccatgtt 575 |||||| |||||||| || ||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 35093075 cttgtatgagcggtgcgcattgagatccaccttccttccaatgacctctccatccatgtt 35093134 Query: 576 caccttca 583 |||||||| Sbjct: 35093135 caccttca 35093142 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatgtcatctgg 411 |||||||| || |||||||| ||||||||||||||||||||||| || || || | |||| Sbjct: 35092662 tcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgtaggtgagctgg 35092721 Query: 412 tattcagaagagttgtcta 430 ||||| | ||||||||||| Sbjct: 35092722 tattcggcagagttgtcta 35092740 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 307 gatgtcctcatgatccttagcctcttcacggagccaacaaacatt 351 ||||||||||||||||| | ||||||||| |||| ||||||||| Sbjct: 35092487 gatgtcctcatgatcctcaacctcttcacagagctgacaaacatt 35092531
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 143 bits (72), Expect = 7e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 456 agaagcgcaaaggccggcggacggcttggtgaacatgatctcaagggccaaggcaagggt 515 ||||||||||||||| ||||||||| |||||||||| |||||||| || |||||||| Sbjct: 153356 agaagcgcaaaggccaatggacggcttcgtgaacatgagttcaagggctaatgcaagggt 153415 Query: 516 cttgtacgagcggtgggcgttgaggtccaccttcctcccaatgacctccccatccatgtt 575 |||||| |||||||| || ||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 153416 cttgtatgagcggtgcgcattgagatccaccttccttccaatgacctctccatccatgtt 153475 Query: 576 caccttca 583 |||||||| Sbjct: 153476 caccttca 153483 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatgtcatctgg 411 |||||||| || |||||||| ||||||||||||||||||||||| || || || | |||| Sbjct: 153003 tcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgtaggtgagctgg 153062 Query: 412 tattcagaagagttgtcta 430 ||||| | ||||||||||| Sbjct: 153063 tattcggcagagttgtcta 153081 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 307 gatgtcctcatgatccttagcctcttcacggagccaacaaacatt 351 ||||||||||||||||| | ||||||||| |||| ||||||||| Sbjct: 152828 gatgtcctcatgatcctcaacctcttcacagagctgacaaacatt 152872
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 143 bits (72), Expect = 7e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 456 agaagcgcaaaggccggcggacggcttggtgaacatgatctcaagggccaaggcaagggt 515 ||||||||||||||| ||||||||| |||||||||| |||||||| || |||||||| Sbjct: 66178 agaagcgcaaaggccaatggacggcttcgtgaacatgagttcaagggctaatgcaagggt 66237 Query: 516 cttgtacgagcggtgggcgttgaggtccaccttcctcccaatgacctccccatccatgtt 575 |||||| |||||||| || ||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 66238 cttgtatgagcggtgcgcattgagatccaccttccttccaatgacctctccatccatgtt 66297 Query: 576 caccttca 583 |||||||| Sbjct: 66298 caccttca 66305 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatgtcatctgg 411 |||||||| || |||||||| ||||||||||||||||||||||| || || || | |||| Sbjct: 65825 tcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgtaggtgagctgg 65884 Query: 412 tattcagaagagttgtcta 430 ||||| | ||||||||||| Sbjct: 65885 tattcggcagagttgtcta 65903 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 307 gatgtcctcatgatccttagcctcttcacggagccaacaaacatt 351 ||||||||||||||||| | ||||||||| |||| ||||||||| Sbjct: 65650 gatgtcctcatgatcctcaacctcttcacagagctgacaaacatt 65694
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 340 ccaacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttca 399 ||||||||||| ||||| |||||||| |||||||||||||||||||||||| | |||||| Sbjct: 749 ccaacaaacatctcccatgggacgtcaccaacaagcatccagtcaccatccttatcttca 690 Query: 400 ta 401 || Sbjct: 689 ta 688
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttc 398 |||||||||| ||||| |||||||||||||||||||||||||| |||||| ||||||| Sbjct: 689 caacaaacatctcccatgggacgtctccaacaagcatccagtctccatccttgtcttc 632
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 |||||||| | ||| ||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 720 acaaacatctgccacgggacatctccaacaagcatccagtcaccatccttgtcttcata 662
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 |||||||| | ||| ||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 772 acaaacatctgccacgggacatctccaacaagcatccagtcaccatccttgtcttcata 714
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 |||||||| | ||| ||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 782 acaaacatctgccacgggacatctccaacaagcatccagtcaccatccttgtcttcata 724
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 |||||||| | ||| ||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 777 acaaacatctgccacgggacatctccaacaagcatccagtcaccatccttgtcttcata 719
>dbj|D14413.1|VIRAUX22B Vigna radiata auxin-regulated mRNA Length = 1165 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatat 402 |||||||| ||||| || || |||||||| |||||||||||||||||| ||||||||||| Sbjct: 582 acaaacatgtcccatggtacatctccaactagcatccagtcaccatccttgtcttcatat 523 Query: 403 gt 404 || Sbjct: 522 gt 521
>gb|J03920.1|SOYAUX22 Soybean auxin-regulated protein (Aux22) mRNA, complete cds Length = 1945 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1364 aaacatttcccaagggacatctccaacaagcatccaatcaccatc 1320
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 358 gggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 ||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 760 gggacatctccaacaagcatccagtcaccatccttgtcttcata 717
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 358 gggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 ||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 30188868 gggacatctccaacaagcatccagtcaccatccttgtcttcata 30188911
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 358 gggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 ||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 35027 gggacatctccaacaagcatccagtcaccatccttgtcttcata 34984
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 358 gggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 ||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 3952 gggacatctccaacaagcatccagtcaccatccttgtcttcata 3909
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 358 gggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 ||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 30280290 gggacatctccaacaagcatccagtcaccatccttgtcttcata 30280333
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 |||||||| ||||| || || |||||||| |||||||||||||||||| |||||||||| Sbjct: 27206 acaaacatctcccatggaacatctccaactagcatccagtcaccatccttgtcttcata 27148
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttc 398 |||||||||| |||||||| || || ||||||||||||||||| |||||| ||||||| Sbjct: 694 caacaaacatctcccaaggtacatcaccaacaagcatccagtctccatccttgtcttc 637
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| ||||| || || ||||||||||||||||||||| |||| |||| Sbjct: 298 caacaaacatctcccatgggacatcaccgacaagcatccagtcaccatccttgtcctcat 239 Query: 401 a 401 | Sbjct: 238 a 238
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatgtc 405 ||||| ||||| ||||| |||||||||||||||||||| |||||| |||| ||||| ||| Sbjct: 68 aacatctcccaggggacatctccaacaagcatccagtcgccatccttgtcctcataggtc 9 Query: 406 a 406 | Sbjct: 8 a 8
>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds Length = 1209 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| ||||| || || |||||||||||||| |||||| ||||||||| Sbjct: 670 caacaaacatatcccaggggacatcgcctacaagcatccagtctccatccttgtcttcat 611 Query: 401 a 401 | Sbjct: 610 a 610
>gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, partial cds Length = 364 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 |||||| ||||||||||||||||| || ||||||||||| ||||| |||||||||| Sbjct: 147 aaacatctcccaagggacgtctcccactagcatccagtctccatctttgtcttcata 91
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| ||||| || || ||||||||||||||||||||| |||| |||| Sbjct: 1148 caacaaacatctcccatgggacatcaccgacaagcatccagtcaccatccttgtcctcat 1089 Query: 401 a 401 | Sbjct: 1088 a 1088
>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds Length = 1187 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || || ||||||||||||||||| |||||||| ||||||||| Sbjct: 735 caacaaacatctcccacggaacatctccaacaagcatccaatcaccatctttgtcttcat 676 Query: 401 a 401 | Sbjct: 675 a 675
>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16) mRNA, complete cds Length = 1279 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || |||||||| |||||||||||||| ||||| | ||||||| Sbjct: 809 caacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttcat 750 Query: 401 atgt 404 |||| Sbjct: 749 atgt 746
>ref|NM_123736.2| Arabidopsis thaliana ATAUX2-11; transcription factor AT5G43700 (ATAUX2-11) mRNA, complete cds Length = 1168 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 342 aacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 ||||||||| |||||||| || || |||||||||||||| |||||||| |||||||||| Sbjct: 724 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 665
>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds Length = 711 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || |||||||| |||||||||||||| ||||| | ||||||| Sbjct: 622 caacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttcat 563 Query: 401 atgt 404 |||| Sbjct: 562 atgt 559
>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds Length = 1261 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || |||||||| |||||||||||||| ||||| | ||||||| Sbjct: 805 caacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttcat 746 Query: 401 atgt 404 |||| Sbjct: 745 atgt 742
>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds, clone: RAFL22-51-M14 Length = 519 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || |||||||| |||||||||||||| ||||| | ||||||| Sbjct: 162 caacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttcat 103 Query: 401 atgt 404 |||| Sbjct: 102 atgt 99
>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16 (At3g04730) mRNA, complete cds Length = 711 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || |||||||| |||||||||||||| ||||| | ||||||| Sbjct: 622 caacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttcat 563 Query: 401 atgt 404 |||| Sbjct: 562 atgt 559
>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || |||||||| |||||||||||||| ||||| | ||||||| Sbjct: 764 caacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttcat 705 Query: 401 atgt 404 |||| Sbjct: 704 atgt 701
>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || |||||||| |||||||||||||| ||||| | ||||||| Sbjct: 793 caacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttcat 734 Query: 401 atgt 404 |||| Sbjct: 733 atgt 730
>gb|BT005853.1| Arabidopsis thaliana At5g43700 gene, complete cds Length = 561 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 342 aacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 ||||||||| |||||||| || || |||||||||||||| |||||||| |||||||||| Sbjct: 492 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 433
>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence Length = 1140 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || |||||||| |||||||||||||| ||||| | ||||||| Sbjct: 809 caacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttcat 750 Query: 401 atgt 404 |||| Sbjct: 749 atgt 746
>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds Length = 1169 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || |||||||| |||||||||||||| ||||| | ||||||| Sbjct: 788 caacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttcat 729 Query: 401 atgt 404 |||| Sbjct: 728 atgt 725
>dbj|D14412.1|VIRAUX22A Vigna radiata auxin-regulated mRNA Length = 838 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||||||||| || || |||||||||||||||||||||||||| Sbjct: 540 aacatttcccatggcacatctccaacaagcatccagtcaccatc 497
>gb|L15450.1|ATHIAA4A Arabidopsis thaliana auxin-responsive protein (IAA4) mRNA, 5' partial cds Length = 558 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 342 aacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 ||||||||| |||||||| || || |||||||||||||| |||||||| |||||||||| Sbjct: 492 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 433
>ref|NM_113205.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2); transcription factor AT3G23050 (IAA7) transcript variant AT3G23050.1 mRNA, complete cds Length = 1196 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 695 acaaacatttcccatgggacatcgccaacgagcatccagtcaccatc 649
>gb|BT012096.1| Arabidopsis thaliana At3g23050 mRNA sequence Length = 732 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 638 acaaacatttcccatgggacatcgccaacgagcatccagtcaccatc 592
>gb|AY072461.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 782 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 638 acaaacatttcccatgggacatcgccaacgagcatccagtcaccatc 592
>gb|AY054651.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 935 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 693 acaaacatttcccatgggacatcgccaacgagcatccagtcaccatc 647
>gb|AF332395.1| Arabidopsis thaliana clone C00014 (o) indoleacetic acid-inducible protein IAA7 (At3g23050) mRNA, complete cds Length = 732 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 638 acaaacatttcccatgggacatcgccaacgagcatccagtcaccatc 592
>emb|BX825560.1|CNS0A534 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 636 acaaacatttcccatgggacatcgccaacgagcatccagtcaccatc 590
>gb|AY087765.1| Arabidopsis thaliana clone 38286 mRNA, complete sequence Length = 1195 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 695 acaaacatttcccatgggacatcgccaacgagcatccagtcaccatc 649
>gb|AF123507.1| Nicotiana tabacum Nt-iaa4.5 deduced protein mRNA, complete cds Length = 993 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatgt 404 ||||| ||||| || || |||||||| |||||||| ||||||||| ||||||||||||| Sbjct: 611 aacatatcccatggtacatctccaactagcatccaatcaccatccttgtcttcatatgt 553
>emb|AJ306828.1|PTR306828 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA5 gene) Length = 1251 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 311 tcctcatgatccttagcctcttcacggagccaacaaacatttcccaagggacgtctccaa 370 |||||||||| || || |||||||| |||| || |||||| ||||||| || ||||| | Sbjct: 870 tcctcatgattctgagtctcttcacagagctaataaacatcccccaaggaacatctccga 811 Query: 371 caagcatccagtcaccatccctgtcttcata 401 |||||||||| || |||||| |||| ||||| Sbjct: 810 caagcatccaatccccatccttgtcctcata 780
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 344 caaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatg 403 ||||||| ||||| || || || ||||||||||||||||| |||||| |||||||||| | Sbjct: 787 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 728 Query: 404 tca 406 ||| Sbjct: 727 tca 725
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 344 caaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatg 403 ||||||| ||||| || || || ||||||||||||||||| |||||| |||||||||| | Sbjct: 778 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 719 Query: 404 tca 406 ||| Sbjct: 718 tca 716
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 344 caaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatg 403 ||||||| ||||| || || || ||||||||||||||||| |||||| |||||||||| | Sbjct: 758 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 699 Query: 404 tca 406 ||| Sbjct: 698 tca 696
>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full insert sequence Length = 1306 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 344 caaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatg 403 ||||||| ||||| || || || ||||||||||||||||| |||||| |||||||||| | Sbjct: 844 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 785 Query: 404 tca 406 ||| Sbjct: 784 tca 782
>gb|U18409.1|ATU18409 Arabidopsis thaliana IAA7 (IAA7) gene, complete cds Length = 899 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 660 acaaacatttcccatgggacatcgccaacgagcatccagtcaccatc 614
>ref|NM_125965.2| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.2 mRNA, complete cds Length = 1531 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| ||||| || || ||||||||||||||||||||||||||| Sbjct: 1191 aaacatctcccacggaacatctccaacaagcatccagtcaccatcc 1146
>ref|NM_180944.1| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.1 mRNA, complete cds Length = 1537 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| ||||| || || ||||||||||||||||||||||||||| Sbjct: 1191 aaacatctcccacggaacatctccaacaagcatccagtcaccatcc 1146
>gb|AY070451.1| Arabidopsis thaliana At5g65670 mRNA sequence Length = 1449 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| ||||| || || ||||||||||||||||||||||||||| Sbjct: 1163 aaacatctcccacggaacatctccaacaagcatccagtcaccatcc 1118
>gb|AF334715.1| Arabidopsis thaliana clone C00016 (e) auxin-induced protein IAA9 (At5g65670) mRNA, complete cds Length = 1017 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| ||||| || || ||||||||||||||||||||||||||| Sbjct: 918 aaacatctcccacggaacatctccaacaagcatccagtcaccatcc 873
>gb|AY087089.1| Arabidopsis thaliana clone 31563 mRNA, complete sequence Length = 1456 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| ||||| || || ||||||||||||||||||||||||||| Sbjct: 1195 aaacatctcccacggaacatctccaacaagcatccagtcaccatcc 1150
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds Length = 884 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttc 398 |||||||||| |||||||| || || ||||||||||||||||| ||||| ||||||| Sbjct: 652 caacaaacatctcccaaggtacatcaccaacaagcatccagtctccatctttgtcttc 595
>gb|U18411.1|ATU18411 Arabidopsis thaliana IAA9 (IAA9) gene, complete cds Length = 1425 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| ||||| || || ||||||||||||||||||||||||||| Sbjct: 1151 aaacatctcccacggaacatctccaacaagcatccagtcaccatcc 1106
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||||||||| |||||||| ||||||||||||||||| Sbjct: 57581 tcccaagggacatctccaaccagcatccagtcaccatc 57544
>dbj|AB004933.1| Vigna radiata mRNA for Aux22e, complete cds Length = 1006 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 364 tctccaacaagcatccagtcaccatccctgtcttcata 401 |||||||| |||||||||||||||||| |||||||||| Sbjct: 601 tctccaaccagcatccagtcaccatccttgtcttcata 564
>ref|NM_119052.2| Arabidopsis thaliana PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor AT4G29080 (PAP2) mRNA, complete cds Length = 1227 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcac 385 |||||||||||||||||| ||||| || ||||||||||||| Sbjct: 830 aaacatttcccaagggacatctccgaccagcatccagtcac 790
>ref|NM_101427.2| Arabidopsis thaliana IAA5; transcription factor AT1G15580 (IAA5) mRNA, complete cds Length = 591 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatat 402 |||||||||||||| || |||||| |||||||||| || ||||| ||||||||||| Sbjct: 437 aacatttcccaaggaacatctccagcaagcatccaatctccatctttgtcttcatat 381
>gb|AY150496.1| Arabidopsis thaliana putative auxin-induced protein IAA5 (At1g15580) mRNA, complete cds Length = 492 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatat 402 |||||||||||||| || |||||| |||||||||| || ||||| ||||||||||| Sbjct: 437 aacatttcccaaggaacatctccagcaagcatccaatctccatctttgtcttcatat 381
>gb|AY133516.1| Arabidopsis thaliana At4g29080/F19B15_110 mRNA, complete cds Length = 918 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcac 385 |||||||||||||||||| ||||| || ||||||||||||| Sbjct: 825 aaacatttcccaagggacatctccgaccagcatccagtcac 785
>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein (IAA1) mRNA, complete cds Length = 1313 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 ||||||||||| |||| || || ||||| ||||||||||| || |||||| ||||||||| Sbjct: 793 caacaaacattccccatggaacatctcctacaagcatccaatctccatccttgtcttcat 734 Query: 401 a 401 | Sbjct: 733 a 733
>gb|AY053404.1| Arabidopsis thaliana AT4g29080/F19B15_110 mRNA, complete cds Length = 1189 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcac 385 |||||||||||||||||| ||||| || ||||||||||||| Sbjct: 830 aaacatttcccaagggacatctccgaccagcatccagtcac 790
>gb|AF332402.1| Arabidopsis thaliana clone C00024 (f) putative phytochrome-associated protein 2 (At4g29080) mRNA, complete cds Length = 918 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcac 385 |||||||||||||||||| ||||| || ||||||||||||| Sbjct: 825 aaacatttcccaagggacatctccgaccagcatccagtcac 785
>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6) Length = 702 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 379 aaacatctcccaagggacatctccaaccagcatccaatcaccatc 335
>emb|AJ458326.1|ATH458326 Arabidopsis thaliana mRNA for putative auxin-induced protein 27 (iaa27 gene) Length = 918 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcac 385 |||||||||||||||||| ||||| || ||||||||||||| Sbjct: 825 aaacatttcccaagggacatctccgaccagcatccagtcac 785
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full insert sequence Length = 430 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcacca 387 |||||||| | ||| ||||| |||||||||||||||||||||||| Sbjct: 45 acaaacatctgccacgggacatctccaacaagcatccagtcacca 1
>gb|AF087936.1|AF087936 Arabidopsis thaliana phytochrome-associated protein 2 (PAP2) mRNA, complete cds Length = 1090 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcac 385 |||||||||||||||||| ||||| || ||||||||||||| Sbjct: 825 aaacatttcccaagggacatctccgaccagcatccagtcac 785
>gb|U18407.1|ATU18407 Arabidopsis thaliana IAA5 (IAA5) gene, partial cds Length = 577 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatat 402 |||||||||||||| || |||||| |||||||||| || ||||| ||||||||||| Sbjct: 423 aacatttcccaaggaacatctccagcaagcatccaatctccatctttgtcttcatat 367
>gb|DQ252491.1| Solanum tuberosum clone 060E03 Aux/IAA protein-like mRNA, complete cds Length = 1590 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 |||||| |||||||| || || ||||||||||||||||| |||||| | |||||||| Sbjct: 1094 aaacatctcccaaggtacatcaccaacaagcatccagtccccatccttatcttcata 1038
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgtca 406 ||||||||||||||||| |||||| |||||||||| |||| Sbjct: 130346 ccaacaagcatccagtctccatccttgtcttcataagtca 130307
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgtca 406 ||||||||||||||||| |||||| |||||||||| |||| Sbjct: 37535 ccaacaagcatccagtctccatccttgtcttcataagtca 37496
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgtca 406 ||||||||||||||||| |||||| |||||||||| |||| Sbjct: 7852760 ccaacaagcatccagtctccatccttgtcttcataagtca 7852721 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 367 ccaacaagcatccagtcaccatccctgtcttcata 401 |||||||||||||||||| ||||| |||||||||| Sbjct: 27627750 ccaacaagcatccagtcagcatccttgtcttcata 27627784
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||| ||||||||||| || || |||||||||||||||||||| Sbjct: 739 aacatctcccaagggacatcaccgacaagcatccagtcaccatc 696
>dbj|AB026822.1| Cucumis sativus CsIAA2 mRNA for Aux/IAA protein, complete cds Length = 1646 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||| ||||||||||| || ||||| ||||||||||||||||| Sbjct: 1206 aacatctcccaagggacatcaccaacgagcatccagtcaccatc 1163
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 367 ccaacaagcatccagtcaccatccctgtcttcata 401 |||||||||||||||||| ||||| |||||||||| Sbjct: 95026 ccaacaagcatccagtcagcatccttgtcttcata 95060
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 364 tctccaacaagcatccagtcaccatcc 390 ||||||||||||||||||||||||||| Sbjct: 111855 tctccaacaagcatccagtcaccatcc 111881
>emb|BX822145.1|CNS0A5ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||||| ||||| || ||||| |||||||||| |||||| Sbjct: 939 acaaacatttcccatgggacatcgccaacgagcatccagttaccatc 893
>dbj|AK109363.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E12, full insert sequence Length = 1220 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcata 401 |||||||||||||||||| ||||| |||||||||| Sbjct: 814 ccaacaagcatccagtcagcatccttgtcttcata 780
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 364 tctccaacaagcatccagtcaccatcc 390 ||||||||||||||||||||||||||| Sbjct: 7950 tctccaacaagcatccagtcaccatcc 7924
>dbj|AK106181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D03, full insert sequence Length = 1261 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcata 401 |||||||||||||||||| ||||| |||||||||| Sbjct: 855 ccaacaagcatccagtcagcatccttgtcttcata 821
>dbj|AK104018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H11, full insert sequence Length = 1221 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcata 401 |||||||||||||||||| ||||| |||||||||| Sbjct: 808 ccaacaagcatccagtcagcatccttgtcttcata 774
>dbj|AK099253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168H04, full insert sequence Length = 1209 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcata 401 |||||||||||||||||| ||||| |||||||||| Sbjct: 803 ccaacaagcatccagtcagcatccttgtcttcata 769
>dbj|AK061439.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B11, full insert sequence Length = 1222 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcata 401 |||||||||||||||||| ||||| |||||||||| Sbjct: 816 ccaacaagcatccagtcagcatccttgtcttcata 782
>ref|NM_192002.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 816 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgt 404 |||||||||||||||||| ||||| | ||||||||||| Sbjct: 701 ccaacaagcatccagtcagcatccttatcttcatatgt 664
>emb|AJ566558.1|TCA566558 Theobroma cacao microsatellite, clone mTcCIR237 Length = 208 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 364 tctccaacaagcatccagtcaccatccctgtcttcata 401 |||||||| ||||||||||| |||||| |||||||||| Sbjct: 82 tctccaactagcatccagtctccatccttgtcttcata 45
>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA, complete cds Length = 1228 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| |||||||| || || ||||||||||||||||| |||||| Sbjct: 825 aaacatctcccaaggaacatccccaacaagcatccagtctccatcc 780
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgt 404 |||||||||||||||||| ||||| | ||||||||||| Sbjct: 27772077 ccaacaagcatccagtcagcatccttatcttcatatgt 27772040 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttc 398 ||||| |||||||||||||||||| ||||||| Sbjct: 7251209 ccaaccagcatccagtcaccatccttgtcttc 7251178
>emb|BX826607.1|CNS0A46L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB46ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 501 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagt 382 |||||||||||||||||| ||||| || |||||||||| Sbjct: 203 aaacatttcccaagggacatctccgaccagcatccagt 166
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgt 404 |||||||||||||||||| ||||| | ||||||||||| Sbjct: 64132 ccaacaagcatccagtcagcatccttatcttcatatgt 64095
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19 Length = 87286 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 |||||||| || || |||||||||||||| |||||||| |||||||||| Sbjct: 5929 tcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 5880
>emb|X53435.1|ATAUX211 A.thaliana auxin-inducible gene Aux2-11 Length = 1776 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 |||||||| || || |||||||||||||| |||||||| |||||||||| Sbjct: 1258 tcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 1209
>emb|X68218.1|PSIAA6D P.sativum gene for PS-IAA6 Length = 5923 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||||||||| |||||||| |||||||| |||||||| Sbjct: 4420 tcccaagggacatctccaaccagcatccaatcaccatc 4383
>dbj|AK106121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E11, full insert sequence Length = 1231 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgt 404 |||||||||||||||||| ||||| | ||||||||||| Sbjct: 788 ccaacaagcatccagtcagcatccttatcttcatatgt 751
>dbj|AK102396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H03, full insert sequence Length = 971 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgt 404 |||||||||||||||||| ||||| | ||||||||||| Sbjct: 703 ccaacaagcatccagtcagcatccttatcttcatatgt 666
>dbj|AK061495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C06, full insert sequence Length = 1140 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgt 404 |||||||||||||||||| ||||| | ||||||||||| Sbjct: 714 ccaacaagcatccagtcagcatccttatcttcatatgt 677
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcata 401 ||||| ||||| ||||| || |||||||||||||||||| | |||||||| Sbjct: 23076 tcccatgggacatctcccacgagcatccagtcaccatccttatcttcata 23027
>dbj|AB004932.1| Vigna radiata mRNA for Aux22d, complete cds Length = 936 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 364 tctccaacaagcatccagtcaccatccctgtcttcata 401 |||||||| ||||||||||||||||| |||||||||| Sbjct: 586 tctccaaccagcatccagtcaccatctttgtcttcata 549
>dbj|AB004931.1| Vigna radiata mRNA for Aux22c, complete cds Length = 899 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatat 402 |||||| |||||||| || |||||||| ||||||||||| ||||| |||| |||||| Sbjct: 475 aaacatctcccaaggaacatctccaaccagcatccagtcgccatctttgtcctcatat 418
>ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa8218 predicted mRNA Length = 846 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttc 398 ||||| ||||| || || || ||||| |||||||||||||||||| ||||||| Sbjct: 752 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttc 700
>gb|BT014412.1| Lycopersicon esculentum clone 133719R, mRNA sequence Length = 977 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||||||| ||| || || ||||| |||||||||||||| ||||| Sbjct: 605 caacaaacattttccatggaacatctcctacaagcatccagtctccatc 557
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatgt 404 ||||| || |||||||| |||||||||||||| ||||| | ||||||||||| Sbjct: 67622 tcccacggtacgtctcctacaagcatccagtcgccatctttatcttcatatgt 67674
>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds Length = 301 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttc 398 ||||| |||||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 53 aacatctcccaaggaacgtcgccaacaagcatccaatctccgtctctgtcttc 1
>gb|AY289604.1| Pinus taeda auxin-induced protein 5 (IAA5) mRNA, complete cds Length = 1289 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| | ||| || || || || |||||||||||||| |||||| ||||||||| Sbjct: 790 caacaaacatctgccatggaacatcgcctacaagcatccagtctccatccttgtcttcat 731 Query: 401 a 401 | Sbjct: 730 a 730
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||||| || || || ||||||||||| || |||||| ||||||||| Sbjct: 658 caacaaacatcccccaaggaacatcaccgacaagcatccaatctccatccttgtcttcat 599 Query: 401 a 401 | Sbjct: 598 a 598
>gb|AY090553.1| Zinnia elegans auxin-regulated protein (IAA8) mRNA, complete cds Length = 1499 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 ||||| ||||| || || ||||||||||||||||| ||||||||| Sbjct: 1159 aacatatcccatggtacatctccaacaagcatccaatcaccatcc 1115
>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA7 gene) Length = 1178 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| ||||| || || || |||||||||||||| ||| | ||||||| Sbjct: 673 caacaaacatgtcccatgggacatcaccgacgagcatccagtcaccgtccttatcttcat 614 Query: 401 a 401 | Sbjct: 613 a 613
>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6 gene) Length = 1206 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcat 400 |||||||||| ||||| || || || || ||||||||||| || |||||| ||||||||| Sbjct: 949 caacaaacatctcccatggaacatcacccacaagcatccaatcgccatccttgtcttcat 890 Query: 401 a 401 | Sbjct: 889 a 889
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||| ||||| ||||| || || |||||||||||||||||||| Sbjct: 1154 aaacatctcccaggggacatcaccgacaagcatccagtcaccatc 1110
>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full insert sequence Length = 1209 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttc 398 ||||| ||||| || || || ||||| |||||||||||||||||| ||||||| Sbjct: 736 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttc 684
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtc 383 |||||||||| ||| ||||||||||| || ||||||||||| Sbjct: 695 acaaacattttccaggggacgtctccgacgagcatccagtc 655
>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full insert sequence Length = 1291 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttc 398 ||||| ||||| || || || ||||| |||||||||||||||||| ||||||| Sbjct: 833 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttc 781
>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full insert sequence Length = 1194 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatccctgtcttc 398 ||||| ||||| || || || ||||| |||||||||||||||||| ||||||| Sbjct: 784 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttc 732
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtc 383 |||||||||| ||| ||||||||||| || ||||||||||| Sbjct: 692 acaaacattttccaggggacgtctccgacgagcatccagtc 652
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttc 398 ||||| |||||||||||||||||| ||||||| Sbjct: 145857 ccaaccagcatccagtcaccatccttgtcttc 145826
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttc 398 ||||| |||||||||||||||||| ||||||| Sbjct: 52639 ccaaccagcatccagtcaccatccttgtcttc 52608
>gb|AF123504.1|AF123504 Nicotiana tabacum Nt-iaa2.3 deduced protein mRNA, complete cds Length = 756 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||| |||||||| || || |||||||||||| |||||||||| Sbjct: 519 aacatatcccaaggaacatcaccaacaagcatcaagtcaccatc 476
>dbj|AB051384.1| Cucumis sativus mRNA, putative member of Aux/IAA gene family, partial cds Length = 375 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||| ||||||||||| || |||||||||||||| || ||||| Sbjct: 63 aacatctcccaagggacatcaccaacaagcatccaatctccatc 20
>gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BAC T16N11 genomic sequence, complete sequence Length = 91001 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatat 402 |||||||| || |||||| |||||||||| || ||||| ||||||||||| Sbjct: 69287 tcccaaggaacatctccagcaagcatccaatctccatctttgtcttcatat 69337
>emb|X53436.1|ATAUX227 A.thaliana auxin-inducible Aux2-27 gene Length = 1815 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatat 402 |||||||| || |||||| |||||||||| || ||||| ||||||||||| Sbjct: 971 tcccaaggaacatctccagcaagcatccaatctccatctttgtcttcatat 921
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 341 caacaaacatttcccaagggacgtctccaacaagcatccagtc 383 |||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 997 caacaaacatctcccatgggacgtcgccgacgagcatccagtc 955
>gb|AF169830.1|AF169830 Glycine max auxin-induced protein ali50 mRNA, partial cds Length = 731 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 343 acaaacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 |||||||| ||||| ||||| || || || ||||||||||||||||| Sbjct: 405 acaaacatctcccatgggacatcacccacgagcatccagtcaccatc 359
>ref|NM_202626.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2) AT3G23050 (IAA7) transcript variant AT3G23050.2 mRNA, complete cds Length = 990 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||| ||||| || ||||| ||||||||||||||||| Sbjct: 686 tcccatgggacatcgccaacgagcatccagtcaccatc 649
>gb|BT013567.1| Lycopersicon esculentum clone 132305F, mRNA sequence Length = 1626 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| ||||| ||||| || || |||||||||||||| |||||| Sbjct: 1192 aaacatctcccaggggacatcaccgacaagcatccagtccccatcc 1147
>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence Length = 207268 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 agttgtctaacagcttcaaggacttc 447 |||||||| ||||||||||||||||| Sbjct: 151796 agttgtcttacagcttcaaggacttc 151821
>emb|AJ937282.1| Lycopersicon esculentum partial mRNA for Aux/IAA protein (iaa9 gene) Length = 1752 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| ||||| ||||| || || |||||||||||||| |||||| Sbjct: 1191 aaacatctcccaggggacatcaccgacaagcatccagtccccatcc 1146
>gb|AY098938.1| Solanum tuberosum Aux/IAA protein mRNA, complete cds Length = 1589 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| |||||||| || || || |||||||||||||| |||||| Sbjct: 1157 aaacatctcccaaggtacatcaccgacaagcatccagtccccatcc 1112
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 352 tcccaagggacgtctccaacaagcatccagtcac 385 ||||||||||| ||||| || ||||||||||||| Sbjct: 52292 tcccaagggacatctccgaccagcatccagtcac 52325
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project) Length = 97714 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 352 tcccaagggacgtctccaacaagcatccagtcac 385 ||||||||||| ||||| || ||||||||||||| Sbjct: 77323 tcccaagggacatctccgaccagcatccagtcac 77356
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 352 tcccaagggacgtctccaacaagcatccagtcac 385 ||||||||||| ||||| || ||||||||||||| Sbjct: 35819 tcccaagggacatctccgaccagcatccagtcac 35852
>emb|AJ627256.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA8 auxin regulated transcriptional repressor (IAA8 gene) Length = 803 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 367 ccaacaagcatccagtcaccatccctgtcttcatatgt 404 |||||||||||||||||| ||||| | || |||||||| Sbjct: 691 ccaacaagcatccagtcagcatccttatcctcatatgt 654
>gb|DQ115325.1| Lycopersicon esculentum AUX/IAA protein (IAA4) mRNA, complete cds Length = 1707 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 345 aaacatttcccaagggacgtctccaacaagcatccagtcaccatcc 390 |||||| ||||| ||||| || || |||||||||||||| |||||| Sbjct: 1192 aaacatctcccaggggacatcaccgacaagcatccagtccccatcc 1147
>gb|AY087635.1| Arabidopsis thaliana clone 37274 mRNA, complete sequence Length = 1403 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||| ||||| || |||||||||||||| |||||||| Sbjct: 1089 tcccatgggacatcgccaacaagcatccaatcaccatc 1052
>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7 Length = 79284 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 352 tcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||| ||||| || ||||| ||||||||||||||||| Sbjct: 36824 tcccatgggacatcgccaacgagcatccagtcaccatc 36787
>ref|NM_116075.2| Arabidopsis thaliana IAA30; transcription factor AT3G62100 (IAA30) mRNA, complete cds Length = 731 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcacc 386 ||||| |||||||| || |||||||| | |||||||||||| Sbjct: 514 aacatctcccaaggaacatctccaaccatcatccagtcacc 474
>ref|NM_130267.3| Arabidopsis thaliana IAA20; transcription factor AT2G46990 (IAA20) mRNA, complete cds Length = 652 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcacc 386 ||||| |||||||| || |||||||| | |||||||||||| Sbjct: 482 aacatctcccaaggaacatctccaaccatcatccagtcacc 442
>gb|AF348576.1| Arabidopsis thaliana clone C00049 (f) auxin-induced protein IAA20 (At2g46990) mRNA, complete cds Length = 528 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcacc 386 ||||| |||||||| || |||||||| | |||||||||||| Sbjct: 476 aacatctcccaaggaacatctccaaccatcatccagtcacc 436
>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds Length = 1481 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 acaagcatccagtcaccatcc 390 ||||||||||||||||||||| Sbjct: 962 acaagcatccagtcaccatcc 942
>emb|BX822779.1|CNS0A64T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 732 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcacc 386 ||||| |||||||| || |||||||| | |||||||||||| Sbjct: 514 aacatctcccaaggaacatctccaaccatcatccagtcacc 474
>dbj|AK117233.1| Arabidopsis thaliana At2g46990 mRNA for putative auxin-induced protein, complete cds, clone: RAFL16-78-L02 Length = 644 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcacc 386 ||||| |||||||| || |||||||| | |||||||||||| Sbjct: 482 aacatctcccaaggaacatctccaaccatcatccagtcacc 442
>gb|U49076.1|ATU49076 Arabidopsis thaliana early auxin-induced (IAA20) mRNA, partial cds Length = 624 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcacc 386 ||||| |||||||| || |||||||| | |||||||||||| Sbjct: 450 aacatctcccaaggaacatctccaaccatcatccagtcacc 410
>gb|AY669801.1| Arabidopsis thaliana clone C105339 IAA30 (At3g62100) mRNA, complete cds Length = 550 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcacc 386 ||||| |||||||| || |||||||| | |||||||||||| Sbjct: 470 aacatctcccaaggaacatctccaaccatcatccagtcacc 430
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 373 agcatccagtcaccatccctgtctt 397 |||||||||||||||||| |||||| Sbjct: 4691 agcatccagtcaccatccttgtctt 4715
>ref|NM_112640.2| Arabidopsis thaliana IAA31; transcription factor AT3G17600 (IAA31) mRNA, complete cds Length = 830 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 375 catccagtcaccatccctgtcttcatatgtca 406 |||||| || |||||| ||||||||||||||| Sbjct: 501 catccaatctccatccttgtcttcatatgtca 470
>ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); transcription factor AT4G14550 (IAA14) mRNA, complete cds Length = 1482 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 358 gggacgtctccaacaagcatccagtcaccatc 389 ||||| || ||||| ||||||||||||||||| Sbjct: 677 gggacatcaccaacgagcatccagtcaccatc 646
>gb|AC166111.4| Mus musculus BAC clone RP23-68O7 from chromosome 1, complete sequence Length = 185692 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 agatagcaggaagagggcat 58 |||||||||||||||||||| Sbjct: 57321 agatagcaggaagagggcat 57302
>ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2481 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 ttcccaagggacgtctccaacaagcatc 378 |||||| ||| ||||||||||||||||| Sbjct: 2265 ttcccatgggtcgtctccaacaagcatc 2238
>ref|XM_476878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1164 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcat 377 ||||||||||| || || |||||||||||||| Sbjct: 695 aacatttcccagggcacatctccaacaagcat 664
>gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, complete cds Length = 687 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 358 gggacgtctccaacaagcatccagtcaccatc 389 ||||| || ||||| ||||||||||||||||| Sbjct: 581 gggacatcaccaacgagcatccagtcaccatc 550
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ggctgcggttctgtgactgg 274 |||||||||||||||||||| Sbjct: 26944 ggctgcggttctgtgactgg 26963
>gb|AC138130.9| Medicago truncatula clone mth2-31d24, complete sequence Length = 146386 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 353 cccaagggacgtctccaacaagcatccagtcaccatccctgtcttcatatgt 404 ||||||| ||||| || ||||||||||| || ||||| | ||||||||||| Sbjct: 34732 cccaaggaacgtcgcctacaagcatccaatctccatctttatcttcatatgt 34681
>emb|AL591063.6| Human DNA sequence from clone RP11-535K1 on chromosome 6, complete sequence Length = 100426 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tagctcctgccatctcaact 80 |||||||||||||||||||| Sbjct: 25847 tagctcctgccatctcaact 25828
>emb|AL118509.9|HSJ770C23 Human DNA sequence from clone RP4-770C23 on chromosome 20 Contains part of the C20orf23 gene for a novel protein similar to KIF1 type and other kinesin-like proteins, complete sequence Length = 81487 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 caacaaacatttcccaaggg 360 |||||||||||||||||||| Sbjct: 69663 caacaaacatttcccaaggg 69682
>gb|BT000543.1| Arabidopsis thaliana putative auxin-induced protein (At3g17600/MKP6_15) mRNA, complete cds Length = 477 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 375 catccagtcaccatccctgtcttcatatgtca 406 |||||| || |||||| ||||||||||||||| Sbjct: 399 catccaatctccatccttgtcttcatatgtca 368
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 358 gggacgtctccaacaagcatccagtcaccatc 389 ||||| || ||||| ||||||||||||||||| Sbjct: 107016 gggacatcaccaacgagcatccagtcaccatc 107047
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 358 gggacgtctccaacaagcatccagtcaccatc 389 ||||| || ||||| ||||||||||||||||| Sbjct: 52512 gggacatcaccaacgagcatccagtcaccatc 52543
>gb|AC159242.2| Mus musculus BAC clone RP24-325A23 from chromosome 13, complete sequence Length = 193570 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 acctccccatccatgttcac 578 |||||||||||||||||||| Sbjct: 72393 acctccccatccatgttcac 72374
>gb|AC106038.3| Homo sapiens chromosome 8, clone RP11-68L18, complete sequence Length = 159024 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 ttcatatgtcatctggtattcaga 419 ||||||||||||| |||||||||| Sbjct: 111548 ttcatatgtcatcgggtattcaga 111525
>gb|AY054274.1| Arabidopsis thaliana AT3g17600/MKP6_15 mRNA, complete cds Length = 806 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 375 catccagtcaccatccctgtcttcatatgtca 406 |||||| || |||||| ||||||||||||||| Sbjct: 477 catccaatctccatccttgtcttcatatgtca 446
>gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome 14, complete sequence Length = 167114 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ctcttcatcaccctcgtctc 235 |||||||||||||||||||| Sbjct: 52363 ctcttcatcaccctcgtctc 52382
>emb|BX825540.1|CNS0A6DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZA08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 579 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 375 catccagtcaccatccctgtcttcatatgtca 406 |||||| || |||||| ||||||||||||||| Sbjct: 249 catccaatctccatccttgtcttcatatgtca 218
>emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 358 gggacgtctccaacaagcatccagtcaccatc 389 ||||| || ||||| ||||||||||||||||| Sbjct: 670 gggacatcaccaacgagcatccagtcaccatc 639
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gtcctcatgatccttagcct 329 |||||||||||||||||||| Sbjct: 1195116 gtcctcatgatccttagcct 1195135
>gb|AC167668.1| Mus musculus BAC clone RP24-241I19 from chromosome 14, complete sequence Length = 173679 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ctcttcatcaccctcgtctc 235 |||||||||||||||||||| Sbjct: 6006 ctcttcatcaccctcgtctc 5987
>gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, complete sequence Length = 257730 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 agatagcaggaagagggcat 58 |||||||||||||||||||| Sbjct: 11374 agatagcaggaagagggcat 11355
>dbj|AB022219.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MKP6 Length = 83233 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 375 catccagtcaccatccctgtcttcatatgtca 406 |||||| || |||||| ||||||||||||||| Sbjct: 41428 catccaatctccatccttgtcttcatatgtca 41459
>dbj|AB054127.1| Pseudobagrus tokiensis mitochondrial DNA, complete genome Length = 16529 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 gcggttctgtgactggcttgaaac 282 |||||| ||||||||||||||||| Sbjct: 7080 gcggttatgtgactggcttgaaac 7057
>dbj|AK103483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130J12, full insert sequence Length = 1164 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcat 377 ||||||||||| || || |||||||||||||| Sbjct: 695 aacatttcccagggcacatctccaacaagcat 664
>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full insert sequence Length = 3151 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 ttcccaagggacgtctccaacaagcatc 378 |||||| ||| ||||||||||||||||| Sbjct: 2487 ttcccatgggtcgtctccaacaagcatc 2460
>dbj|AB026823.1| Cucumis sativus CsIAA3 mRNA for Aux/IAA protein, complete cds Length = 540 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 346 aacatttcccaagggacgtctccaacaagcatccagtcaccatc 389 ||||||||||| || || || || || ||||||||||||||||| Sbjct: 488 aacatttcccatggaacatcgccgacgagcatccagtcaccatc 445
>gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, partial cds Length = 732 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 358 gggacgtctccaacaagcatccagtcaccatc 389 ||||| || ||||| ||||||||||||||||| Sbjct: 389 gggacatcaccaacgagcatccagtcaccatc 358
>gb|AY669802.1| Arabidopsis thaliana clone C00606 IAA31 (At3g17600) mRNA, complete cds Length = 477 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 375 catccagtcaccatccctgtcttcatatgtca 406 |||||| || |||||| ||||||||||||||| Sbjct: 399 catccaatctccatccttgtcttcatatgtca 368
>dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC clone 521F14, complete sequence Length = 116160 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 ttcatatgtcatctggtattcaga 419 ||||||||||||| |||||||||| Sbjct: 86259 ttcatatgtcatcgggtattcaga 86282
>dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds Length = 2376 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 ttcccaagggacgtctccaacaagcatc 378 |||||| ||| ||||||||||||||||| Sbjct: 2229 ttcccatgggtcgtctccaacaagcatc 2202 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,197,490 Number of Sequences: 3902068 Number of extensions: 4197490 Number of successful extensions: 73572 Number of sequences better than 10.0: 184 Number of HSP's better than 10.0 without gapping: 186 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73187 Number of HSP's gapped (non-prelim): 379 length of query: 583 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 560 effective length of database: 17,143,297,704 effective search space: 9600246714240 effective search space used: 9600246714240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
