ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10c22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 266 6e-68
2gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genom... 266 6e-68
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 266 6e-68
4dbj|AK104400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 6e-68
5dbj|AK104138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 6e-68
6dbj|AK061303.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 6e-68
7ref|XM_468840.1| Oryza sativa (japonica cultivar-group), mRNA 258 1e-65
8dbj|AK073355.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 1e-65
9gb|AY111531.1| Zea mays CL29427_-2 mRNA sequence 194 2e-46
10gb|AY105548.1| Zea mays PCO095526 mRNA sequence 54 4e-04
11gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.007
12gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.007
13dbj|AK070827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
14gb|AC121301.8| Mus musculus chromosome 7, clone RP23-432H1, comp... 42 1.7
15emb|AL591594.9| Human DNA sequence from clone RP11-424N15 on chr... 42 1.7
16emb|AL096772.5|HSJ365O12 Human DNA sequence from clone RP3-365O1... 42 1.7
17gb|AC099757.2| Homo sapiens chromosome 1 clone RP11-523K4, compl... 42 1.7
18gb|AC019050.4| Homo sapiens BAC clone RP11-92K14 from 2, complet... 42 1.7
19dbj|AB065679.1| Homo sapiens gene for seven transmembrane helix ... 42 1.7
20gb|AC171404.5| Mus musculus chromosome 7, clone RP24-235N21, com... 42 1.7
21gb|AC034194.5| Homo sapiens chromosome 3 clone RP11-669E3 map 3p... 42 1.7
22gb|AC026204.5| Homo sapiens chromosome 3 clone RP11-590A20 map 3... 42 1.7
23gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosom... 40 6.5
24gb|BC006631.1| Mus musculus nuclear mitotic apparatus protein 1,... 40 6.5
25gb|BC049791.1| Mus musculus nuclear mitotic apparatus protein 1,... 40 6.5
26gb|BC004667.1| Mus musculus nuclear mitotic apparatus protein 1,... 40 6.5
27ref|NM_133947.2| Mus musculus nuclear mitotic apparatus protein ... 40 6.5
28gb|AC132297.4| Mus musculus chromosome 7 clone RP24-330M18, comp... 40 6.5
29ref|XM_818290.1| Trypanosoma brucei TREU927 pumilio RNA-binding ... 40 6.5
30emb|CR380838.2| Pan troglodytes chromosome X BAC RP43-021E02, co... 40 6.5
31gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosom... 40 6.5
32gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete... 40 6.5
33gb|AC007164.3| Homo sapiens BAC clone RP11-304A10 from 7, comple... 40 6.5
34emb|Z99569.1|HS106H14 Human DNA sequence from clone RP1-106H14 o... 40 6.5
35emb|AL807757.9| Human DNA sequence from clone RP11-49O14 on chro... 40 6.5
36dbj|AB212761.1| Nephila clavata spKv1.1 mRNA for potassium chann... 40 6.5
37gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, co... 40 6.5
38dbj|AK144141.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 6.5
39gb|AC013565.10| Homo sapiens chromosome 15, clone RP11-326A19, c... 40 6.5
40emb|BX548063.3| Zebrafish DNA sequence from clone CH211-198J3 in... 40 6.5
41gb|AY104202.1| Zea mays PCO125624 mRNA sequence 40 6.5
42gb|AC150275.2| Mus musculus BAC clone RP23-409M16 from 7, comple... 40 6.5 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  266 bits (134), Expect = 6e-68
 Identities = 281/330 (85%)
 Strand = Plus / Plus

                                                                            
Query: 153      atggttgcactacttagaatgcaatgtcatgctggatgtgtcggagcaatacgggggtga 212
                |||||||||| || ||||  ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 18263324 atggttgcaccacctagaccgcaatgtcatgctggatgtgtcgaagcaagacagggatga 18263383

                                                                            
Query: 213      caatgtctggtgagctaagctgggggagatggccttcggagggcatcacctcaacgatgg 272
                | ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| ||||| |
Sbjct: 18263384 ctatgtccggtgagctaagttggggtagatggccctcagacggcattacctcgacgattg 18263443

                                                                            
Query: 273      aatcgctaccaagatgcttgtgcaagtactctgacaccacaactggcactgctaggtcct 332
                | |||| ||| || |||||||||| |||||| ||||||||||| ||||| || || || |
Sbjct: 18263444 agtcgccaccgaggtgcttgtgcaggtactcagacaccacaaccggcacagcaagatctt 18263503

                                                                            
Query: 333      tggtgctctgaacgatatggcatgggaccgagacgagtggtaggagggtgcgcacatcgc 392
                ||||||||||||| || |||||||| || | ||| |||||||||||| | |||||||| |
Sbjct: 18263504 tggtgctctgaacaatgtggcatggtacggtgacaagtggtaggaggcttcgcacatcac 18263563

                                                                            
Query: 393      tctggaagatcgtttgtgcaacgctcagggctatgtctgggcgaatgttgaagagagttc 452
                |||||||||| || || || || ||||||||||||||||| || ||||||||||| || |
Sbjct: 18263564 tctggaagattgtctgggcgacactcagggctatgtctggacgtatgttgaagagtgtgc 18263623

                                              
Query: 453      ggctgaactcctgaactgacactgattcca 482
                |||| ||||||||||||| |||||||||||
Sbjct: 18263624 ggctaaactcctgaactgccactgattcca 18263653



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 425     atgtctgggcgaatgttgaagagagttcggctgaactcctg 465
               ||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 5391484 atgtccgggcgcatgttgaagagggtgcggctgaactcctg 5391444
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>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete
             sequence
          Length = 159579

 Score =  266 bits (134), Expect = 6e-68
 Identities = 281/330 (85%)
 Strand = Plus / Plus

                                                                         
Query: 153   atggttgcactacttagaatgcaatgtcatgctggatgtgtcggagcaatacgggggtga 212
             |||||||||| || ||||  ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 29755 atggttgcaccacctagaccgcaatgtcatgctggatgtgtcgaagcaagacagggatga 29814

                                                                         
Query: 213   caatgtctggtgagctaagctgggggagatggccttcggagggcatcacctcaacgatgg 272
             | ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| ||||| |
Sbjct: 29815 ctatgtccggtgagctaagttggggtagatggccctcagacggcattacctcgacgattg 29874

                                                                         
Query: 273   aatcgctaccaagatgcttgtgcaagtactctgacaccacaactggcactgctaggtcct 332
             | |||| ||| || |||||||||| |||||| ||||||||||| ||||| || || || |
Sbjct: 29875 agtcgccaccgaggtgcttgtgcaggtactcagacaccacaaccggcacagcaagatctt 29934

                                                                         
Query: 333   tggtgctctgaacgatatggcatgggaccgagacgagtggtaggagggtgcgcacatcgc 392
             ||||||||||||| || |||||||| || | ||| |||||||||||| | |||||||| |
Sbjct: 29935 tggtgctctgaacaatgtggcatggtacggtgacaagtggtaggaggcttcgcacatcac 29994

                                                                         
Query: 393   tctggaagatcgtttgtgcaacgctcagggctatgtctgggcgaatgttgaagagagttc 452
             |||||||||| || || || || ||||||||||||||||| || ||||||||||| || |
Sbjct: 29995 tctggaagattgtctgggcgacactcagggctatgtctggacgtatgttgaagagtgtgc 30054

                                           
Query: 453   ggctgaactcctgaactgacactgattcca 482
             |||| ||||||||||||| |||||||||||
Sbjct: 30055 ggctaaactcctgaactgccactgattcca 30084
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  266 bits (134), Expect = 6e-68
 Identities = 281/330 (85%)
 Strand = Plus / Plus

                                                                            
Query: 153      atggttgcactacttagaatgcaatgtcatgctggatgtgtcggagcaatacgggggtga 212
                |||||||||| || ||||  ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 18256865 atggttgcaccacctagaccgcaatgtcatgctggatgtgtcgaagcaagacagggatga 18256924

                                                                            
Query: 213      caatgtctggtgagctaagctgggggagatggccttcggagggcatcacctcaacgatgg 272
                | ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| ||||| |
Sbjct: 18256925 ctatgtccggtgagctaagttggggtagatggccctcagacggcattacctcgacgattg 18256984

                                                                            
Query: 273      aatcgctaccaagatgcttgtgcaagtactctgacaccacaactggcactgctaggtcct 332
                | |||| ||| || |||||||||| |||||| ||||||||||| ||||| || || || |
Sbjct: 18256985 agtcgccaccgaggtgcttgtgcaggtactcagacaccacaaccggcacagcaagatctt 18257044

                                                                            
Query: 333      tggtgctctgaacgatatggcatgggaccgagacgagtggtaggagggtgcgcacatcgc 392
                ||||||||||||| || |||||||| || | ||| |||||||||||| | |||||||| |
Sbjct: 18257045 tggtgctctgaacaatgtggcatggtacggtgacaagtggtaggaggcttcgcacatcac 18257104

                                                                            
Query: 393      tctggaagatcgtttgtgcaacgctcagggctatgtctgggcgaatgttgaagagagttc 452
                |||||||||| || || || || ||||||||||||||||| || ||||||||||| || |
Sbjct: 18257105 tctggaagattgtctgggcgacactcagggctatgtctggacgtatgttgaagagtgtgc 18257164

                                              
Query: 453      ggctgaactcctgaactgacactgattcca 482
                |||| ||||||||||||| |||||||||||
Sbjct: 18257165 ggctaaactcctgaactgccactgattcca 18257194



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 425     atgtctgggcgaatgttgaagagagttcggctgaactcctg 465
               ||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 5390699 atgtccgggcgcatgttgaagagggtgcggctgaactcctg 5390659
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>dbj|AK104400.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E03, full
           insert sequence
          Length = 1175

 Score =  266 bits (134), Expect = 6e-68
 Identities = 281/330 (85%)
 Strand = Plus / Minus

                                                                       
Query: 153 atggttgcactacttagaatgcaatgtcatgctggatgtgtcggagcaatacgggggtga 212
           |||||||||| || ||||  ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 977 atggttgcaccacctagaccgcaatgtcatgctggatgtgtcgaagcaagacagggatga 918

                                                                       
Query: 213 caatgtctggtgagctaagctgggggagatggccttcggagggcatcacctcaacgatgg 272
           | ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| ||||| |
Sbjct: 917 ctatgtccggtgagctaagttggggtagatggccctcagacggcattacctcgacgattg 858

                                                                       
Query: 273 aatcgctaccaagatgcttgtgcaagtactctgacaccacaactggcactgctaggtcct 332
           | |||| ||| || |||||||||| |||||| ||||||||||| ||||| || || || |
Sbjct: 857 agtcgccaccgaggtgcttgtgcaggtactcagacaccacaaccggcacagcaagatctt 798

                                                                       
Query: 333 tggtgctctgaacgatatggcatgggaccgagacgagtggtaggagggtgcgcacatcgc 392
           ||||||||||||| || |||||||| || | ||| |||||||||||| | |||||||| |
Sbjct: 797 tggtgctctgaacaatgtggcatggtacggtgacaagtggtaggaggcttcgcacatcac 738

                                                                       
Query: 393 tctggaagatcgtttgtgcaacgctcagggctatgtctgggcgaatgttgaagagagttc 452
           |||||||||| || || || || ||||||||||||||||| || ||||||||||| || |
Sbjct: 737 tctggaagattgtctgggcgacactcagggctatgtctggacgtatgttgaagagtgtgc 678

                                         
Query: 453 ggctgaactcctgaactgacactgattcca 482
           |||| ||||||||||||| |||||||||||
Sbjct: 677 ggctaaactcctgaactgccactgattcca 648
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>dbj|AK104138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H10, full
           insert sequence
          Length = 1172

 Score =  266 bits (134), Expect = 6e-68
 Identities = 281/330 (85%)
 Strand = Plus / Minus

                                                                       
Query: 153 atggttgcactacttagaatgcaatgtcatgctggatgtgtcggagcaatacgggggtga 212
           |||||||||| || ||||  ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 974 atggttgcaccacctagaccgcaatgtcatgctggatgtgtcgaagcaagacagggatga 915

                                                                       
Query: 213 caatgtctggtgagctaagctgggggagatggccttcggagggcatcacctcaacgatgg 272
           | ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| ||||| |
Sbjct: 914 ctatgtccggtgagctaagttggggtagatggccctcagacggcattacctcgacgattg 855

                                                                       
Query: 273 aatcgctaccaagatgcttgtgcaagtactctgacaccacaactggcactgctaggtcct 332
           | |||| ||| || |||||||||| |||||| ||||||||||| ||||| || || || |
Sbjct: 854 agtcgccaccgaggtgcttgtgcaggtactcagacaccacaaccggcacagcaagatctt 795

                                                                       
Query: 333 tggtgctctgaacgatatggcatgggaccgagacgagtggtaggagggtgcgcacatcgc 392
           ||||||||||||| || |||||||| || | ||| |||||||||||| | |||||||| |
Sbjct: 794 tggtgctctgaacaatgtggcatggtacggtgacaagtggtaggaggcttcgcacatcac 735

                                                                       
Query: 393 tctggaagatcgtttgtgcaacgctcagggctatgtctgggcgaatgttgaagagagttc 452
           |||||||||| || || || || ||||||||||||||||| || ||||||||||| || |
Sbjct: 734 tctggaagattgtctgggcgacactcagggctatgtctggacgtatgttgaagagtgtgc 675

                                         
Query: 453 ggctgaactcctgaactgacactgattcca 482
           |||| ||||||||||||| |||||||||||
Sbjct: 674 ggctaaactcctgaactgccactgattcca 645
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>dbj|AK061303.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G08, full
           insert sequence
          Length = 1070

 Score =  266 bits (134), Expect = 6e-68
 Identities = 281/330 (85%)
 Strand = Plus / Minus

                                                                       
Query: 153 atggttgcactacttagaatgcaatgtcatgctggatgtgtcggagcaatacgggggtga 212
           |||||||||| || ||||  ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 877 atggttgcaccacctagaccgcaatgtcatgctggatgtgtcgaagcaagacagggatga 818

                                                                       
Query: 213 caatgtctggtgagctaagctgggggagatggccttcggagggcatcacctcaacgatgg 272
           | ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| ||||| |
Sbjct: 817 ctatgtccggtgagctaagttggggtagatggccctcagacggcattacctcgacgattg 758

                                                                       
Query: 273 aatcgctaccaagatgcttgtgcaagtactctgacaccacaactggcactgctaggtcct 332
           | |||| ||| || |||||||||| |||||| ||||||||||| ||||| || || || |
Sbjct: 757 agtcgccaccgaggtgcttgtgcaggtactcagacaccacaaccggcacagcaagatctt 698

                                                                       
Query: 333 tggtgctctgaacgatatggcatgggaccgagacgagtggtaggagggtgcgcacatcgc 392
           ||||||||||||| || |||||||| || | ||| |||||||||||| | |||||||| |
Sbjct: 697 tggtgctctgaacaatgtggcatggtacggtgacaagtggtaggaggcttcgcacatcac 638

                                                                       
Query: 393 tctggaagatcgtttgtgcaacgctcagggctatgtctgggcgaatgttgaagagagttc 452
           |||||||||| || || || || ||||||||||||||||| || ||||||||||| || |
Sbjct: 637 tctggaagattgtctgggcgacactcagggctatgtctggacgtatgttgaagagtgtgc 578

                                         
Query: 453 ggctgaactcctgaactgacactgattcca 482
           |||| ||||||||||||| |||||||||||
Sbjct: 577 ggctaaactcctgaactgccactgattcca 548
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>ref|XM_468840.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 942

 Score =  258 bits (130), Expect = 1e-65
 Identities = 265/310 (85%)
 Strand = Plus / Minus

                                                                       
Query: 173 gcaatgtcatgctggatgtgtcggagcaatacgggggtgacaatgtctggtgagctaagc 232
           ||||||||||||||||||||||| ||||| || ||| |||| ||||| ||||||||||| 
Sbjct: 935 gcaatgtcatgctggatgtgtcgaagcaagacagggatgactatgtccggtgagctaagt 876

                                                                       
Query: 233 tgggggagatggccttcggagggcatcacctcaacgatggaatcgctaccaagatgcttg 292
           ||||| |||||||| || || ||||| ||||| ||||| || |||| ||| || ||||||
Sbjct: 875 tggggtagatggccctcagacggcattacctcgacgattgagtcgccaccgaggtgcttg 816

                                                                       
Query: 293 tgcaagtactctgacaccacaactggcactgctaggtccttggtgctctgaacgatatgg 352
           |||| |||||| ||||||||||| ||||| || || || |||||||||||||| || |||
Sbjct: 815 tgcaggtactcagacaccacaaccggcacagcaagatctttggtgctctgaacaatgtgg 756

                                                                       
Query: 353 catgggaccgagacgagtggtaggagggtgcgcacatcgctctggaagatcgtttgtgca 412
           ||||| || | ||| |||||||||||| | |||||||| ||||||||||| || || || 
Sbjct: 755 catggtacggtgacaagtggtaggaggcttcgcacatcactctggaagattgtctgggcg 696

                                                                       
Query: 413 acgctcagggctatgtctgggcgaatgttgaagagagttcggctgaactcctgaactgac 472
           || ||||||||||||||||| || ||||||||||| || ||||| ||||||||||||| |
Sbjct: 695 acactcagggctatgtctggacgtatgttgaagagtgtgcggctaaactcctgaactgcc 636

                     
Query: 473 actgattcca 482
           ||||||||||
Sbjct: 635 actgattcca 626
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>dbj|AK073355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A08, full
           insert sequence
          Length = 1245

 Score =  258 bits (130), Expect = 1e-65
 Identities = 280/330 (84%)
 Strand = Plus / Minus

                                                                       
Query: 153 atggttgcactacttagaatgcaatgtcatgctggatgtgtcggagcaatacgggggtga 212
           |||||||||| || ||||  ||||||||||||||||||||||| ||||| || ||| |||
Sbjct: 976 atggttgcaccacctagaccgcaatgtcatgctggatgtgtcgaagcaagacagggatga 917

                                                                       
Query: 213 caatgtctggtgagctaagctgggggagatggccttcggagggcatcacctcaacgatgg 272
           | ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| ||||| |
Sbjct: 916 ctatgtccggtgagctaagttggggtagatggccctcagacggcattacctcgacgattg 857

                                                                       
Query: 273 aatcgctaccaagatgcttgtgcaagtactctgacaccacaactggcactgctaggtcct 332
           | |||| ||| || |||||||||| |||||| ||||||||||| | ||| || || || |
Sbjct: 856 agtcgccaccgaggtgcttgtgcaggtactcagacaccacaaccgccacagcaagatctt 797

                                                                       
Query: 333 tggtgctctgaacgatatggcatgggaccgagacgagtggtaggagggtgcgcacatcgc 392
           ||||||||||||| || |||||||| || | ||| |||||||||||| | |||||||| |
Sbjct: 796 tggtgctctgaacaatgtggcatggtacggtgacaagtggtaggaggcttcgcacatcac 737

                                                                       
Query: 393 tctggaagatcgtttgtgcaacgctcagggctatgtctgggcgaatgttgaagagagttc 452
           |||||||||| || || || || ||||||||||||||||| || ||||||||||| || |
Sbjct: 736 tctggaagattgtctgggcgacactcagggctatgtctggacgtatgttgaagagtgtgc 677

                                         
Query: 453 ggctgaactcctgaactgacactgattcca 482
           |||| ||||||||||||| |||||||||||
Sbjct: 676 ggctaaactcctgaactgccactgattcca 647
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>gb|AY111531.1| Zea mays CL29427_-2 mRNA sequence
          Length = 471

 Score =  194 bits (98), Expect = 2e-46
 Identities = 194/226 (85%)
 Strand = Plus / Plus

                                                                       
Query: 167 tagaatgcaatgtcatgctggatgtgtcggagcaatacgggggtgacaatgtctggtgag 226
           |||| ||| ||||||||||||||||| ||||| || || ||||| || |||||||| |||
Sbjct: 242 tagactgcgatgtcatgctggatgtgccggagtaagacaggggttacgatgtctggagag 301

                                                                       
Query: 227 ctaagctgggggagatggccttcggagggcatcacctcaacgatggaatcgctaccaaga 286
           ||||||||||| ||||||||||| || ||||||||||| |||||||| |||| |||||| 
Sbjct: 302 ctaagctggggaagatggccttcagacggcatcacctccacgatggagtcgccaccaagg 361

                                                                       
Query: 287 tgcttgtgcaagtactctgacaccacaactggcactgctaggtccttggtgctctgaacg 346
           ||| |||||| |||||| ||||||||||||||||| || || ||||||||||||||||| 
Sbjct: 362 tgcctgtgcaggtactcagacaccacaactggcaccgcgagatccttggtgctctgaaca 421

                                                         
Query: 347 atatggcatgggaccgagacgagtggtaggagggtgcgcacatcgc 392
           || |||||||||||    ||| | || |||||| ||||||||||||
Sbjct: 422 atgtggcatgggacactaacgtgcgggaggaggctgcgcacatcgc 467
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>gb|AY105548.1| Zea mays PCO095526 mRNA sequence
          Length = 852

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 85/103 (82%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                       
Query: 381 tgcgcacatcgctctggaagatcgtt-tgtgcaacgctcagggctatgtctgggcgaatg 439
           ||||||| ||||||||||||||  || || ||||| || || || ||||| || || || 
Sbjct: 831 tgcgcacgtcgctctggaagattcttctgggcaacactaagcgcaatgtccggacgtata 772

                                                      
Query: 440 ttgaagagagttcggctgaactcctgaactgacactgattcca 482
           |||||||| || | ||| ||||||||||||| |||||||||||
Sbjct: 771 ttgaagagcgtcctgctaaactcctgaactgccactgattcca 729
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>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 425   atgtctgggcgaatgttgaagagagttcggctgaactcctg 465
             ||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 97652 atgtccgggcgcatgttgaagagggtgcggctgaactcctg 97612
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>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09,
              complete sequence
          Length = 153950

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 425    atgtctgggcgaatgttgaagagagttcggctgaactcctg 465
              ||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 121375 atgtccgggcgcatgttgaagagggtgcggctgaactcctg 121335
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>dbj|AK070827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064N24, full
           insert sequence
          Length = 1487

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 425 atgtctgggcgaatgttgaagagagttcggctgaactcctg 465
           ||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 909 atgtccgggcgcatgttgaagagggtgcggctgaactcctg 869
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>gb|AC121301.8| Mus musculus chromosome 7, clone RP23-432H1, complete sequence
          Length = 205639

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    gacctcataaagcttcaatga 149
              |||||||||||||||||||||
Sbjct: 162063 gacctcataaagcttcaatga 162083
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>emb|AL591594.9| Human DNA sequence from clone RP11-424N15 on chromosome 1 Contains the 5'
              end of the ADSS gene for adenylosuccinate synthase, the 5'
              end of the gene for a novel protein (DKFZp686A0738,
              FLJ23552) and two CpG islands, complete sequence
          Length = 152313

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 463    ctgaactgacactgattccag 483
              |||||||||||||||||||||
Sbjct: 124552 ctgaactgacactgattccag 124572
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>emb|AL096772.5|HSJ365O12 Human DNA sequence from clone RP3-365O12 on chromosome 6p11.2-12.3
             Contains the gene for a novel protein similar to KIAA0758
             and two novel genes, complete sequence
          Length = 117636

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 409   tgcaacgctcagggctatgtctggg 433
             ||||| |||||||||||||||||||
Sbjct: 12262 tgcaatgctcagggctatgtctggg 12286
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>gb|AC099757.2| Homo sapiens chromosome 1 clone RP11-523K4, complete sequence
          Length = 154865

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 463   ctgaactgacactgattccag 483
             |||||||||||||||||||||
Sbjct: 10667 ctgaactgacactgattccag 10687
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>gb|AC019050.4| Homo sapiens BAC clone RP11-92K14 from 2, complete sequence
          Length = 153120

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 463   ctgaactgacactgattccag 483
             |||||||||||||||||||||
Sbjct: 20550 ctgaactgacactgattccag 20570
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>dbj|AB065679.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds,
             isolate:CBRC7TM_242
          Length = 109156

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 409   tgcaacgctcagggctatgtctggg 433
             ||||| |||||||||||||||||||
Sbjct: 62118 tgcaatgctcagggctatgtctggg 62142
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>gb|AC171404.5| Mus musculus chromosome 7, clone RP24-235N21, complete sequence
          Length = 146054

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 129    gacctcataaagcttcaatga 149
              |||||||||||||||||||||
Sbjct: 126733 gacctcataaagcttcaatga 126713
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>gb|AC034194.5| Homo sapiens chromosome 3 clone RP11-669E3 map 3p, complete sequence
          Length = 179255

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 463   ctgaactgacactgattccag 483
             |||||||||||||||||||||
Sbjct: 12503 ctgaactgacactgattccag 12483
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>gb|AC026204.5| Homo sapiens chromosome 3 clone RP11-590A20 map 3p, complete sequence
          Length = 171061

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 463    ctgaactgacactgattccag 483
              |||||||||||||||||||||
Sbjct: 104103 ctgaactgacactgattccag 104083
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>gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosome 7, complete sequence
          Length = 218177

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   caccacaactggcactgcta 326
             ||||||||||||||||||||
Sbjct: 11317 caccacaactggcactgcta 11298
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>gb|BC006631.1| Mus musculus nuclear mitotic apparatus protein 1, mRNA (cDNA clone
            IMAGE:3481703), complete cds
          Length = 2940

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  caccacaactggcactgcta 326
            ||||||||||||||||||||
Sbjct: 2151 caccacaactggcactgcta 2170
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>gb|BC049791.1| Mus musculus nuclear mitotic apparatus protein 1, mRNA (cDNA clone
            MGC:59410 IMAGE:6505037), complete cds
          Length = 7214

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  caccacaactggcactgcta 326
            ||||||||||||||||||||
Sbjct: 6378 caccacaactggcactgcta 6397
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>gb|BC004667.1| Mus musculus nuclear mitotic apparatus protein 1, mRNA (cDNA clone
           IMAGE:3498604), partial cds
          Length = 1443

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 caccacaactggcactgcta 326
           ||||||||||||||||||||
Sbjct: 647 caccacaactggcactgcta 666
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>ref|NM_133947.2| Mus musculus nuclear mitotic apparatus protein 1 (Numa1), mRNA
          Length = 7214

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  caccacaactggcactgcta 326
            ||||||||||||||||||||
Sbjct: 6378 caccacaactggcactgcta 6397
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>gb|AC132297.4| Mus musculus chromosome 7 clone RP24-330M18, complete sequence
          Length = 152941

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   caccacaactggcactgcta 326
             ||||||||||||||||||||
Sbjct: 55000 caccacaactggcactgcta 55019
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>ref|XM_818290.1| Trypanosoma brucei TREU927 pumilio RNA-binding protein (Tb10.26.0140)
            partial mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 243  ggccttcggagggcatcacctcaa 266
            ||||||||| ||||||||||||||
Sbjct: 1582 ggccttcggggggcatcacctcaa 1559
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>emb|CR380838.2| Pan troglodytes chromosome X BAC RP43-021E02, complete sequence
          Length = 205764

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    caagtactctgacaccacaa 314
              ||||||||||||||||||||
Sbjct: 153922 caagtactctgacaccacaa 153903
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>gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosome 3, complete sequence
          Length = 201277

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 103    tgaatcatcaagtaaatgcagata 126
              |||||||||||| |||||||||||
Sbjct: 111153 tgaatcatcaaggaaatgcagata 111130
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>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence
          Length = 227968

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    caccacaactggcactgcta 326
              ||||||||||||||||||||
Sbjct: 177796 caccacaactggcactgcta 177777
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>gb|AC007164.3| Homo sapiens BAC clone RP11-304A10 from 7, complete sequence
          Length = 89862

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   gggggtgacaatgtctggtg 224
             ||||||||||||||||||||
Sbjct: 76758 gggggtgacaatgtctggtg 76739
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>emb|Z99569.1|HS106H14 Human DNA sequence from clone RP1-106H14 on chromosome Xq21.1-21.33
             Contains a CpG island, complete sequence
          Length = 80730

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   caagtactctgacaccacaa 314
             ||||||||||||||||||||
Sbjct: 74383 caagtactctgacaccacaa 74364
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>emb|AL807757.9| Human DNA sequence from clone RP11-49O14 on chromosome 9 Contains two
             novel genes, complete sequence
          Length = 93279

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ttattatacacattttaagt 43
             ||||||||||||||||||||
Sbjct: 89709 ttattatacacattttaagt 89690
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>dbj|AB212761.1| Nephila clavata spKv1.1 mRNA for potassium channel Kv1.1, complete
           cds
          Length = 2765

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 agctgggggagatggccttc 249
           ||||||||||||||||||||
Sbjct: 653 agctgggggagatggccttc 672
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>gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, complete sequence
          Length = 177819

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 464    tgaactgacactgattccag 483
              ||||||||||||||||||||
Sbjct: 159858 tgaactgacactgattccag 159839
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>dbj|AK144141.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:G430036B18 product:Nuclear mitotic apparatus
            protein 1 (Fragment) homolog [Homo sapiens], full insert
            sequence
          Length = 2936

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  caccacaactggcactgcta 326
            ||||||||||||||||||||
Sbjct: 2165 caccacaactggcactgcta 2184
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>gb|AC013565.10| Homo sapiens chromosome 15, clone RP11-326A19, complete sequence
          Length = 188246

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 140    gcttcaatgagcgatggttgcactactt 167
              |||||||||||| ||| |||||||||||
Sbjct: 164094 gcttcaatgagccatgattgcactactt 164067
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>emb|BX548063.3| Zebrafish DNA sequence from clone CH211-198J3 in linkage group 20,
              complete sequence
          Length = 200237

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     tattatacacattttaagta 44
              ||||||||||||||||||||
Sbjct: 160734 tattatacacattttaagta 160753
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>gb|AY104202.1| Zea mays PCO125624 mRNA sequence
          Length = 1720

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 ctcataaagcttcaatgagc 151
           ||||||||||||||||||||
Sbjct: 82  ctcataaagcttcaatgagc 63
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>gb|AC150275.2| Mus musculus BAC clone RP23-409M16 from 7, complete sequence
          Length = 224935

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    caccacaactggcactgcta 326
              ||||||||||||||||||||
Sbjct: 151578 caccacaactggcactgcta 151597


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,302,552
Number of Sequences: 3902068
Number of extensions: 3302552
Number of successful extensions: 54980
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54877
Number of HSP's gapped (non-prelim): 102
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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