ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10c21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_479079.1| Oryza sativa (japonica cultivar-group), mRNA 64 6e-07
2dbj|AK101099.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
4dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
5dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
6gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell ... 44 0.60
7gb|AC087040.6|AC087040 Mus musculus 1 BAC RP23-269M3 (RPCI Mouse... 44 0.60
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.4
9gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 42 2.4
10gb|AC123796.2| Mus musculus BAC clone RP24-320P9 from chromosome... 42 2.4
11gb|AC116731.9| Mus musculus chromosome 8, clone RP23-346D17, com... 42 2.4
12emb|BX908733.14| Zebrafish DNA sequence from clone CH211-190N7 i... 42 2.4
13gb|AC129416.1| Homo sapiens 12 BAC RP11-464G3 (Roswell Park Canc... 42 2.4
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
15gb|AC148599.2| Xenopus tropicalis clone CH216-2G20, complete seq... 42 2.4
16emb|BX649373.4| Zebrafish DNA sequence from clone CH211-270E10 i... 42 2.4
17gb|AC007447.6|AC007447 Homo sapiens, clone hRPK.76_A_1, complete... 42 2.4
18emb|AL732530.6| Mouse DNA sequence from clone RP23-102I12 on chr... 42 2.4
19ref|XM_550449.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.3
20gb|AC150278.1| Pan troglodytes BAC clone CH251-126G17 from Y, co... 40 9.3
21gb|AC120843.11| Mus musculus chromosome 12, clone RP23-71C5, com... 40 9.3
22gb|AC093716.3| Homo sapiens BAC clone RP11-702L4 from 7, complet... 40 9.3
23gb|AC137702.18| Medicago truncatula clone mth2-7k10, complete se... 40 9.3
24emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chr... 40 9.3
25emb|AL353597.20| Human DNA sequence from clone RP1-153P14 on chr... 40 9.3
26emb|AL160054.14| Human DNA sequence from clone RP11-8C21 on chro... 40 9.3
27emb|AL137245.11| Human DNA sequence from clone RP11-196I2 on chr... 40 9.3
28emb|AL121898.23|HSA430K20 Human DNA sequence from clone RP11-430... 40 9.3
29emb|AJ512819.1|TAE512819 Triticum aestivum stB1.1b gene for sulp... 40 9.3
30emb|CR931734.2| Medicago truncatula chromosome 5 clone mth2-62m2... 40 9.3
31emb|AL805946.5| Mouse DNA sequence from clone RP23-127B1 on chro... 40 9.3
32dbj|BS000654.1| Pan troglodytes chromosome Y clone:PTB-129E12, c... 40 9.3
33gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 9.3
34gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 9.3
35gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha... 40 9.3
36gb|AC159229.2| Mus musculus BAC clone RP24-351I2 from chromosome... 40 9.3
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
38gb|AC150909.3| Pan troglodytes BAC clone CH251-1056O7 from chrom... 40 9.3
39gb|AC156805.2| Pan troglodytes BAC clone CH251-830G14 from chrom... 40 9.3
40gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, co... 40 9.3
41dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
42emb|AL831750.8| Mouse DNA sequence from clone RP23-37L2 on chrom... 40 9.3
43dbj|AK099594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
44emb|CR932358.4| Zebrafish DNA sequence from clone DKEY-105J12 in... 40 9.3
45emb|AL954688.9| Zebrafish DNA sequence from clone CH211-212L1 in... 40 9.3

>ref|XM_479079.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2300

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 276 tgctctccaagcattcaagtccaagaatgattgcaggtgatctccagtcaga 327
           |||||||||||||||||||||| ||||||||||  |||| ||||||| ||||
Sbjct: 510 tgctctccaagcattcaagtcccagaatgattgatggtgctctccagccaga 459



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 373 ctgtgattcttcaccatggcatgttccatcat 404
           ||||||||||||||||| || || ||||||||
Sbjct: 416 ctgtgattcttcaccatagcttgatccatcat 385



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>dbj|AK101099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025A03, full
           insert sequence
          Length = 2306

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 276 tgctctccaagcattcaagtccaagaatgattgcaggtgatctccagtcaga 327
           |||||||||||||||||||||| ||||||||||  |||| ||||||| ||||
Sbjct: 516 tgctctccaagcattcaagtcccagaatgattgatggtgctctccagccaga 465



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 373 ctgtgattcttcaccatggcatgttccatcat 404
           ||||||||||||||||| || || ||||||||
Sbjct: 422 ctgtgattcttcaccatagcttgatccatcat 391



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 373      ctgtgattcttcaccatggcatgttccatcatcctgatagaaggcca 419
                ||||||||||||||||| || || |||||||| |||| |||||||||
Sbjct: 24667622 ctgtgattcttcaccatagcttgatccatcattctgacagaaggcca 24667576



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 276      tgctctccaagcattcaagtcc 297
                ||||||||||||||||||||||
Sbjct: 24667888 tgctctccaagcattcaagtcc 24667867



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>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0039M16
          Length = 133229

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 373    ctgtgattcttcaccatggcatgttccatcatcctgatagaaggcca 419
              ||||||||||||||||| || || |||||||| |||| |||||||||
Sbjct: 123689 ctgtgattcttcaccatagcttgatccatcattctgacagaaggcca 123643



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 276    tgctctccaagcattcaagtcc 297
              ||||||||||||||||||||||
Sbjct: 123955 tgctctccaagcattcaagtcc 123934



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>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0040H10
          Length = 132919

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 373   ctgtgattcttcaccatggcatgttccatcatcctgatagaaggcca 419
             ||||||||||||||||| || || |||||||| |||| |||||||||
Sbjct: 23559 ctgtgattcttcaccatagcttgatccatcattctgacagaaggcca 23513



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 276   tgctctccaagcattcaagtcc 297
             ||||||||||||||||||||||
Sbjct: 23825 tgctctccaagcattcaagtcc 23804



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>gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell Park Cancer Institute Mouse
             BAC) complete sequence
          Length = 204950

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 641   ctgaaatctcaacaaattagtataag 666
             |||||| |||||||||||||||||||
Sbjct: 65813 ctgaaaactcaacaaattagtataag 65788



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>gb|AC087040.6|AC087040 Mus musculus 1 BAC RP23-269M3 (RPCI Mouse BAC) complete sequence
          Length = 142488

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 641   ctgaaatctcaacaaattagtataag 666
             |||||| |||||||||||||||||||
Sbjct: 19890 ctgaaaactcaacaaattagtataag 19915



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 630      attatgaaatcctgaaatctc 650
                |||||||||||||||||||||
Sbjct: 33331334 attatgaaatcctgaaatctc 33331354



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>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 630   attatgaaatcctgaaatctc 650
             |||||||||||||||||||||
Sbjct: 87850 attatgaaatcctgaaatctc 87870



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>gb|AC123796.2| Mus musculus BAC clone RP24-320P9 from chromosome 8, complete sequence
          Length = 156593

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 451   aaatcaaagacagcttagtagataa 475
             |||||||||||||||||| ||||||
Sbjct: 57747 aaatcaaagacagcttagaagataa 57723



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>gb|AC116731.9| Mus musculus chromosome 8, clone RP23-346D17, complete sequence
          Length = 230139

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 451    aaatcaaagacagcttagtagataa 475
              |||||||||||||||||| ||||||
Sbjct: 164385 aaatcaaagacagcttagaagataa 164361



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>emb|BX908733.14| Zebrafish DNA sequence from clone CH211-190N7 in linkage group 22,
             complete sequence
          Length = 153031

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 518   acccattacttataaggaaataaac 542
             |||||||||||| ||||||||||||
Sbjct: 88095 acccattacttaaaaggaaataaac 88071



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>gb|AC129416.1| Homo sapiens 12 BAC RP11-464G3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 139995

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 368   agagactgtgattcttcacca 388
             |||||||||||||||||||||
Sbjct: 24720 agagactgtgattcttcacca 24700



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 630      attatgaaatcctgaaatctc 650
                |||||||||||||||||||||
Sbjct: 33421844 attatgaaatcctgaaatctc 33421864



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>gb|AC148599.2| Xenopus tropicalis clone CH216-2G20, complete sequence
          Length = 206059

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 265    gtggcatggtgtgctctccaa 285
              |||||||||||||||||||||
Sbjct: 177795 gtggcatggtgtgctctccaa 177775



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>emb|BX649373.4| Zebrafish DNA sequence from clone CH211-270E10 in linkage group 22,
             complete sequence
          Length = 49940

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 518   acccattacttataaggaaataaac 542
             |||||||||||| ||||||||||||
Sbjct: 11582 acccattacttaaaaggaaataaac 11558



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>gb|AC007447.6|AC007447 Homo sapiens, clone hRPK.76_A_1, complete sequence
          Length = 155210

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 368   agagactgtgattcttcacca 388
             |||||||||||||||||||||
Sbjct: 84328 agagactgtgattcttcacca 84308



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>emb|AL732530.6| Mouse DNA sequence from clone RP23-102I12 on chromosome 4, complete
              sequence
          Length = 211998

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 644    aaatctcaacaaattagtataagca 668
              |||||||||||||||| ||||||||
Sbjct: 159258 aaatctcaacaaattaatataagca 159234



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>ref|XM_550449.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2472

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 385  accatggcatgttccatcat 404
            ||||||||||||||||||||
Sbjct: 2036 accatggcatgttccatcat 2017



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>gb|AC150278.1| Pan troglodytes BAC clone CH251-126G17 from Y, complete sequence
          Length = 171976

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   ttcctcacttaacgtggcat 271
             ||||||||||||||||||||
Sbjct: 47954 ttcctcacttaacgtggcat 47973



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>gb|AC120843.11| Mus musculus chromosome 12, clone RP23-71C5, complete sequence
          Length = 220627

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 640   cctgaaatctcaacaaatta 659
             ||||||||||||||||||||
Sbjct: 60936 cctgaaatctcaacaaatta 60917



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>gb|AC093716.3| Homo sapiens BAC clone RP11-702L4 from 7, complete sequence
          Length = 77028

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ttttattagtataggtaata 73
             ||||||||||||||||||||
Sbjct: 55071 ttttattagtataggtaata 55090



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>gb|AC137702.18| Medicago truncatula clone mth2-7k10, complete sequence
          Length = 94750

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 583   tttgatcaatcatatacctg 602
             ||||||||||||||||||||
Sbjct: 20033 tttgatcaatcatatacctg 20052



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>emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chromosome 1 Contains a
             CpG island, complete sequence
          Length = 171985

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   ttcctcacttaacgtggcat 271
             ||||||||||||||||||||
Sbjct: 28261 ttcctcacttaacgtggcat 28280



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>emb|AL353597.20| Human DNA sequence from clone RP1-153P14 on chromosome 6 Contains the
             gene for a novel protein (containing KIAA0082, FLJ22156
             and FLJ20341), three novel genes, the gene for a novel
             protein and three CpG islands, complete sequence
          Length = 162451

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 628   tgattatgaaatcctgaaatctcaacaaatta 659
             ||||||||||| |||||||||| ||| |||||
Sbjct: 20822 tgattatgaaaccctgaaatcttaacgaatta 20791



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>emb|AL160054.14| Human DNA sequence from clone RP11-8C21 on chromosome 9 Contains the 5'
              end of a novel gene (SHC3), a novel gene (HFSE-1), the CSK2
              gene for CDC28 protein kinase regulatory subunit 2
              (CKSHS2), the 5' end of the gene for SECIS binding protein
              2 (SBP2) and three CpG islands, complete sequence
          Length = 206200

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    catggtgtgctctccaagca 288
              ||||||||||||||||||||
Sbjct: 154768 catggtgtgctctccaagca 154749



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>emb|AL137245.11| Human DNA sequence from clone RP11-196I2 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 146994

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 578    aataatttgatcaatcatat 597
              ||||||||||||||||||||
Sbjct: 130429 aataatttgatcaatcatat 130410



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>emb|AL121898.23|HSA430K20 Human DNA sequence from clone RP11-430K20 on chromosome 20 Contains the
              5' end of the PLCB4 gene for phospholipase C beta 4 and a
              CpG island, complete sequence
          Length = 210359

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 522    attacttataaggaaataaa 541
              ||||||||||||||||||||
Sbjct: 155287 attacttataaggaaataaa 155306



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>emb|AJ512819.1|TAE512819 Triticum aestivum stB1.1b gene for sulphate transporter, exons 1-14,
            genome B
          Length = 3880

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 635  gaaatcctgaaatctcaaca 654
            ||||||||||||||||||||
Sbjct: 1063 gaaatcctgaaatctcaaca 1044



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>emb|CR931734.2| Medicago truncatula chromosome 5 clone mth2-62m24, COMPLETE SEQUENCE
          Length = 88409

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 629   gattatgaaatcctgaaatctcaa 652
             ||||||||||||| ||||||||||
Sbjct: 76789 gattatgaaatccggaaatctcaa 76766



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>emb|AL805946.5| Mouse DNA sequence from clone RP23-127B1 on chromosome 4 Contains the
             3' end of a novel gene, complete sequence
          Length = 133178

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   agcccaacaatctgaactct 503
             ||||||||||||||||||||
Sbjct: 60086 agcccaacaatctgaactct 60105



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>dbj|BS000654.1| Pan troglodytes chromosome Y clone:PTB-129E12, complete sequences
          Length = 193714

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   ttcctcacttaacgtggcat 271
             ||||||||||||||||||||
Sbjct: 49293 ttcctcacttaacgtggcat 49274



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 156     gctccagccactgcggcacc 175
               ||||||||||||||||||||
Sbjct: 2768352 gctccagccactgcggcacc 2768371



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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 252     ttcctcacttaacgtggcat 271
               ||||||||||||||||||||
Sbjct: 5894097 ttcctcacttaacgtggcat 5894078



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>gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha subunit, membrane
            protein homolog, and Myb-related protein genes, complete
            cds; and unknown gene
          Length = 33178

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 385  accatggcatgttccatcat 404
            ||||||||||||||||||||
Sbjct: 6970 accatggcatgttccatcat 6951



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>gb|AC159229.2| Mus musculus BAC clone RP24-351I2 from chromosome 12, complete sequence
          Length = 134517

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 640    cctgaaatctcaacaaatta 659
              ||||||||||||||||||||
Sbjct: 123512 cctgaaatctcaacaaatta 123493



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    accatggcatgttccatcat 404
              ||||||||||||||||||||
Sbjct: 381141 accatggcatgttccatcat 381122



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>gb|AC150909.3| Pan troglodytes BAC clone CH251-1056O7 from chromosome y, complete
             sequence
          Length = 178039

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   ttcctcacttaacgtggcat 271
             ||||||||||||||||||||
Sbjct: 54814 ttcctcacttaacgtggcat 54795



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>gb|AC156805.2| Pan troglodytes BAC clone CH251-830G14 from chromosome y, complete
              sequence
          Length = 230623

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    ttcctcacttaacgtggcat 271
              ||||||||||||||||||||
Sbjct: 214849 ttcctcacttaacgtggcat 214868



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>gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, complete sequence
          Length = 211987

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 462    agcttagtagataattttcctaag 485
              |||||||||||||||| |||||||
Sbjct: 153415 agcttagtagataattatcctaag 153438



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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644B06
          Length = 194509

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   accatggcatgttccatcat 404
             ||||||||||||||||||||
Sbjct: 91094 accatggcatgttccatcat 91075



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>emb|AL831750.8| Mouse DNA sequence from clone RP23-37L2 on chromosome X, complete
              sequence
          Length = 189991

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 381    cttcaccatggcatgttccatcat 404
              |||||||||| |||||||||||||
Sbjct: 129417 cttcaccatgccatgttccatcat 129440



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>dbj|AK099594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044A06, full
            insert sequence
          Length = 2469

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 385  accatggcatgttccatcat 404
            ||||||||||||||||||||
Sbjct: 2032 accatggcatgttccatcat 2013



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>emb|CR932358.4| Zebrafish DNA sequence from clone DKEY-105J12 in linkage group 12,
              complete sequence
          Length = 138570

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 566    acttactaactaaataattt 585
              ||||||||||||||||||||
Sbjct: 130829 acttactaactaaataattt 130810



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>emb|AL954688.9| Zebrafish DNA sequence from clone CH211-212L1 in linkage group 4,
             complete sequence
          Length = 210027

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   acttactaactaaataattt 585
             ||||||||||||||||||||
Sbjct: 21311 acttactaactaaataattt 21292


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,742,631
Number of Sequences: 3902068
Number of extensions: 5742631
Number of successful extensions: 101418
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101156
Number of HSP's gapped (non-prelim): 262
length of query: 683
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 660
effective length of database: 17,143,297,704
effective search space: 11314576484640
effective search space used: 11314576484640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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