| Clone Name | rbaal10c20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105C15, full insert sequence Length = 1392 Score = 315 bits (159), Expect = 9e-83 Identities = 324/379 (85%) Strand = Plus / Minus Query: 229 atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 288 ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| | Sbjct: 1026 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 967 Query: 289 atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 348 |||||||||| || || || || || |||||||||||||||||||||||||| || || | Sbjct: 966 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 907 Query: 349 cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgcgatgaacg 408 | || || || ||||| ||||| |||||||| ||||| || ||||||||||| ||||| | Sbjct: 906 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgctatgaatg 847 Query: 409 agttcccgtagaactttatggtgctgttgccatgctcagtctcgacggtttcctttccta 468 | |||||| |||| |||| ||||| | |||||||||||||| ||||||||| |||||| Sbjct: 846 aattcccgaagaatgttatagtgctttcaccatgctcagtctcaacggtttcccttccta 787 Query: 469 tccggttagaagcaacaaggggaaccaagttagcgccggcatggccttgcatgacacgct 528 ||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||| |||| Sbjct: 786 tcctgttagaagcaacaaggggaaccaggttagcaccagcatgtccttgcatgacgcgct 727 Query: 529 tccagtgttcacgggaatccaggttcatatcctggggttcagaaccaatagcagtgggat 588 |||||||||| |||||||| ||||| |||||||||| ||||||||||| ||||| |||| Sbjct: 726 tccagtgttctcgggaatctaggttattatcctggggctcagaaccaattgcagttggat 667 Query: 589 agaacaatatttccgcccc 607 ||||||| ||||| ||||| Sbjct: 666 agaacaaaatttcagcccc 648
>dbj|AK106147.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H04, full insert sequence Length = 1249 Score = 315 bits (159), Expect = 9e-83 Identities = 324/379 (85%) Strand = Plus / Minus Query: 229 atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 288 ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| | Sbjct: 977 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 918 Query: 289 atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 348 |||||||||| || || || || || |||||||||||||||||||||||||| || || | Sbjct: 917 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 858 Query: 349 cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgcgatgaacg 408 | || || || ||||| ||||| |||||||| ||||| || ||||||||||| ||||| | Sbjct: 857 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgctatgaatg 798 Query: 409 agttcccgtagaactttatggtgctgttgccatgctcagtctcgacggtttcctttccta 468 | |||||| |||| |||| ||||| | |||||||||||||| ||||||||| |||||| Sbjct: 797 aattcccgaagaatgttatagtgctttcaccatgctcagtctcaacggtttcccttccta 738 Query: 469 tccggttagaagcaacaaggggaaccaagttagcgccggcatggccttgcatgacacgct 528 ||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||| |||| Sbjct: 737 tcctgttagaagcaacaaggggaaccaggttagcaccagcatgtccttgcatgacgcgct 678 Query: 529 tccagtgttcacgggaatccaggttcatatcctggggttcagaaccaatagcagtgggat 588 |||||||||| |||||||| ||||| |||||||||| ||||||||||| ||||| |||| Sbjct: 677 tccagtgttctcgggaatctaggttattatcctggggctcagaaccaattgcagttggat 618 Query: 589 agaacaatatttccgcccc 607 ||||||| ||||| ||||| Sbjct: 617 agaacaaaatttcagcccc 599
>dbj|AK061722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A03, full insert sequence Length = 1249 Score = 315 bits (159), Expect = 9e-83 Identities = 324/379 (85%) Strand = Plus / Minus Query: 229 atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 288 ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| | Sbjct: 977 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 918 Query: 289 atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 348 |||||||||| || || || || || |||||||||||||||||||||||||| || || | Sbjct: 917 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 858 Query: 349 cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgcgatgaacg 408 | || || || ||||| ||||| |||||||| ||||| || ||||||||||| ||||| | Sbjct: 857 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgctatgaatg 798 Query: 409 agttcccgtagaactttatggtgctgttgccatgctcagtctcgacggtttcctttccta 468 | |||||| |||| |||| ||||| | |||||||||||||| ||||||||| |||||| Sbjct: 797 aattcccgaagaatgttatagtgctttcaccatgctcagtctcaacggtttcccttccta 738 Query: 469 tccggttagaagcaacaaggggaaccaagttagcgccggcatggccttgcatgacacgct 528 ||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||| |||| Sbjct: 737 tcctgttagaagcaacaaggggaaccaggttagcaccagcatgtccttgcatgacgcgct 678 Query: 529 tccagtgttcacgggaatccaggttcatatcctggggttcagaaccaatagcagtgggat 588 |||||||||| |||||||| ||||| |||||||||| ||||||||||| ||||| |||| Sbjct: 677 tccagtgttctcgggaatctaggttattatcctggggctcagaaccaattgcagttggat 618 Query: 589 agaacaatatttccgcccc 607 ||||||| ||||| ||||| Sbjct: 617 agaacaaaatttcagcccc 599
>dbj|AB062681.1| Oryza sativa (japonica cultivar-group) mRNA for putative hydrolase, complete cds Length = 1219 Score = 315 bits (159), Expect = 9e-83 Identities = 324/379 (85%) Strand = Plus / Minus Query: 229 atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 288 ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| | Sbjct: 957 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 898 Query: 289 atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 348 |||||||||| || || || || || |||||||||||||||||||||||||| || || | Sbjct: 897 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 838 Query: 349 cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgcgatgaacg 408 | || || || ||||| ||||| |||||||| ||||| || ||||||||||| ||||| | Sbjct: 837 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgctatgaatg 778 Query: 409 agttcccgtagaactttatggtgctgttgccatgctcagtctcgacggtttcctttccta 468 | |||||| |||| |||| ||||| | |||||||||||||| ||||||||| |||||| Sbjct: 777 aattcccgaagaatgttatagtgctttcaccatgctcagtctcaacggtttcccttccta 718 Query: 469 tccggttagaagcaacaaggggaaccaagttagcgccggcatggccttgcatgacacgct 528 ||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||| |||| Sbjct: 717 tcctgttagaagcaacaaggggaaccaggttagcaccagcatgtccttgcatgacgcgct 658 Query: 529 tccagtgttcacgggaatccaggttcatatcctggggttcagaaccaatagcagtgggat 588 |||||||||| |||||||| ||||| |||||||||| ||||||||||| ||||| |||| Sbjct: 657 tccagtgttctcgggaatctaggttattatcctggggctcagaaccaattgcagttggat 598 Query: 589 agaacaatatttccgcccc 607 ||||||| ||||| ||||| Sbjct: 597 agaacaaaatttcagcccc 579
>gb|AY111916.1| Zea mays CL4656_1 mRNA sequence Length = 621 Score = 270 bits (136), Expect = 5e-69 Identities = 306/363 (84%) Strand = Plus / Plus Query: 239 gccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctgaatatccccca 298 ||||||||||||||| || ||||||||||| |||||||||| ||||||||||||||| | Sbjct: 193 gccatccaacgtcagtagcactttgtatagttcagggcgccggtccctgaatatcccgta 252 Query: 299 gccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagcacctcctcgtc 358 || || || | || |||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 253 accatgcctaatcgacttgatctcatccaagtcaaactctgccaccagcacttcctcgtc 312 Query: 359 cttgtcgtttgcgagcttcacgatttctccagttggccctgcgatgaacgagttcccgta 418 |||||||| || |||||||| |||||||| ||||| ||||| ||||| || ||||| || Sbjct: 313 tttgtcgttagcaagcttcactatttctccggttggtcctgcaatgaaggaattcccata 372 Query: 419 gaactttatggtgctgttgccatgctcagtctcgacggtttcctttcctatccggttaga 478 ||| |||| | | | |||||||||||||| || || ||||| | || |||||||| || Sbjct: 373 gaaggttatcgaggtcttgccatgctcagtgtcaacagtttctctgccaatccggttgga 432 Query: 479 agcaacaaggggaaccaagttagcgccggcatggccttgcatgacacgcttccagtgttc 538 ||||||||| || |||||||| || || |||||||||||||| || |||||||| ||||| Sbjct: 433 agcaacaagagggaccaagttggcaccagcatggccttgcataacccgcttccaatgttc 492 Query: 539 acgggaatccaggttcatatcctggggttcagaaccaatagcagtgggatagaacaatat 598 ||||||||||||||| |||||||||||| || ||||| |||| |||||| |||| ||| Sbjct: 493 acgggaatccaggttacaatcctggggttcggatccaattgcagngggataaaacagtat 552 Query: 599 ttc 601 ||| Sbjct: 553 ttc 555
>gb|DQ428320.1| Sorghum propinquum locus PRC0343 genomic sequence Length = 1102 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 771 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 712 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 711 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 656 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1018 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 959 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 958 gtttctctgccaatccggttggaagcaac 930
>gb|DQ428319.1| Sorghum bicolor voucher PI585454 locus PRC0343 genomic sequence Length = 1480 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 1141 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 1082 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 1081 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 1026 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1396 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 1337 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 1336 gtttctctgccaatccggttggaagcaac 1308
>gb|DQ428318.1| Sorghum bicolor voucher PI267539 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428317.1| Sorghum bicolor voucher PI267408 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428316.1| Sorghum bicolor voucher PI221607 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428315.1| Sorghum bicolor voucher PI152702 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428314.1| Sorghum bicolor voucher NSL92371 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428313.1| Sorghum bicolor voucher NSL87902 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428312.1| Sorghum bicolor voucher NSL87666 locus PRC0343 genomic sequence Length = 1472 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 1141 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 1082 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 1081 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 1026 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1387 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 1328 Query: 456 gtttcctttcctatccggttagaagcaacaag 487 ||||| | || |||||||| ||||||||||| Sbjct: 1327 gtttctctgccaatccggttggaagcaacaag 1296
>gb|DQ428311.1| Sorghum bicolor voucher NSL77217 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428310.1| Sorghum bicolor voucher NSL77034 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428309.1| Sorghum bicolor voucher NSL56174 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428308.1| Sorghum bicolor voucher NSL56003 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428307.1| Sorghum bicolor voucher NSL55243 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428306.1| Sorghum bicolor voucher NSL51365 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428305.1| Sorghum bicolor voucher NSL51030 locus PRC0343 genomic sequence Length = 1472 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 1141 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 1082 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 1081 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 1026 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1387 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 1328 Query: 456 gtttcctttcctatccggttagaagcaacaag 487 ||||| | || |||||||| ||||||||||| Sbjct: 1327 gtttctctaccaatccggttggaagcaacaag 1296
>gb|DQ428304.1| Sorghum bicolor voucher NSL50875 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>gb|DQ428303.1| Sorghum bicolor voucher BTx623 locus PRC0343 genomic sequence Length = 1114 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||||||| || || |||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 775 accaagttggcaccagcatggccttgcataactcgcttccaatgttcacgggaatccagg 716 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || ||||||||||||||| ||||| |||||||||||||||| |||||| ||||| Sbjct: 715 ttaccatcctggggttcagatccaattgcagtgggatagaacagtatttcagcccc 660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || ||||| ||||| |||| ||||| ||||||||||||||||| || Sbjct: 1030 cctgcaatgaaggaattcccatagaaggttatcgtgctcttgccatgctcagtctcaaca 971 Query: 456 gtttcctttcctatccggttagaagcaac 484 ||||| | || |||||||| |||||||| Sbjct: 970 gtttctctgccaatccggttggaagcaac 942
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Minus Query: 229 atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 288 ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| | Sbjct: 19672406 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 19672347 Query: 289 atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 348 |||||||||| || || || || || |||||||||||||||||||||||||| || || | Sbjct: 19672346 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 19672287 Query: 349 cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgc 400 | || || || ||||| ||||| |||||||| ||||| || ||||||||||| Sbjct: 19672286 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgc 19672235 Score = 119 bits (60), Expect = 1e-23 Identities = 102/116 (87%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||| |||||| || ||||| ||||||||||| |||||||||||||| |||||||| ||| Sbjct: 19671937 accaggttagcaccagcatgtccttgcatgacgcgcttccagtgttctcgggaatctagg 19671878 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || |||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 19671877 ttattatcctggggctcagaaccaattgcagttggatagaacaaaatttcagcccc 19671822 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || |||||| |||| |||| ||||| | |||||||||||||| ||| Sbjct: 19672167 cctgctatgaatgaattcccgaagaatgttatagtgctttcaccatgctcagtctcaacg 19672108 Query: 456 gtttcctttcctatccggttagaagcaacaaggggaacc 494 |||||| ||||||||| |||||||||||||||||||||| Sbjct: 19672107 gtttcccttcctatcctgttagaagcaacaaggggaacc 19672069 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 508 catggccttgcatgacacgcttccagtgttca 539 |||||||||||||||||||||||||||||||| Sbjct: 18344656 catggccttgcatgacacgcttccagtgttca 18344625
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Minus Query: 229 atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 288 ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| | Sbjct: 29164 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 29105 Query: 289 atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 348 |||||||||| || || || || || |||||||||||||||||||||||||| || || | Sbjct: 29104 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 29045 Query: 349 cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgc 400 | || || || ||||| ||||| |||||||| ||||| || ||||||||||| Sbjct: 29044 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgc 28993 Score = 119 bits (60), Expect = 1e-23 Identities = 102/116 (87%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||| |||||| || ||||| ||||||||||| |||||||||||||| |||||||| ||| Sbjct: 28695 accaggttagcaccagcatgtccttgcatgacgcgcttccagtgttctcgggaatctagg 28636 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || |||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 28635 ttattatcctggggctcagaaccaattgcagttggatagaacaaaatttcagcccc 28580 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || |||||| |||| |||| ||||| | |||||||||||||| ||| Sbjct: 28925 cctgctatgaatgaattcccgaagaatgttatagtgctttcaccatgctcagtctcaacg 28866 Query: 456 gtttcctttcctatccggttagaagcaacaaggggaacc 494 |||||| ||||||||| |||||||||||||||||||||| Sbjct: 28865 gtttcccttcctatcctgttagaagcaacaaggggaacc 28827
>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0605D08 Length = 144340 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Minus Query: 229 atgatgtcttgccatccaacgtcagcagtactttgtatagatcagggcgcctgtccctga 288 ||||| ||| ||||||||| || || || ||||| ||||||||||| |||| |||||| | Sbjct: 138692 atgatttctcgccatccaatgttagaagcactttatatagatcaggacgccggtccctaa 138633 Query: 289 atatcccccagccgtgtctcgtggatttgatctcgtccaagtcgaactctgccaccagca 348 |||||||||| || || || || || |||||||||||||||||||||||||| || || | Sbjct: 138632 atatcccccaaccatgcctggtagacttgatctcgtccaagtcgaactctgctacaagaa 138573 Query: 349 cctcctcgtccttgtcgtttgcgagcttcacgatttctccagttggccctgc 400 | || || || ||||| ||||| |||||||| ||||| || ||||||||||| Sbjct: 138572 cgtcttcatctttgtcatttgcaagcttcacaatttcaccggttggccctgc 138521 Score = 119 bits (60), Expect = 1e-23 Identities = 102/116 (87%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacacgcttccagtgttcacgggaatccagg 551 |||| |||||| || ||||| ||||||||||| |||||||||||||| |||||||| ||| Sbjct: 138223 accaggttagcaccagcatgtccttgcatgacgcgcttccagtgttctcgggaatctagg 138164 Query: 552 ttcatatcctggggttcagaaccaatagcagtgggatagaacaatatttccgcccc 607 || |||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 138163 ttattatcctggggctcagaaccaattgcagttggatagaacaaaatttcagcccc 138108 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 396 cctgcgatgaacgagttcccgtagaactttatggtgctgttgccatgctcagtctcgacg 455 ||||| ||||| || |||||| |||| |||| ||||| | |||||||||||||| ||| Sbjct: 138453 cctgctatgaatgaattcccgaagaatgttatagtgctttcaccatgctcagtctcaacg 138394 Query: 456 gtttcctttcctatccggttagaagcaacaaggggaacc 494 |||||| ||||||||| |||||||||||||||||||||| Sbjct: 138393 gtttcccttcctatcctgttagaagcaacaaggggaacc 138355
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 508 catggccttgcatgacacgcttccagtgttca 539 |||||||||||||||||||||||||||||||| Sbjct: 7580 catggccttgcatgacacgcttccagtgttca 7549
>ref|NM_128305.2| Arabidopsis thaliana NLP1 (NITRILASE-LIKE PROTEIN 1); hydrolase, acting on carbon-nitrogen (but not peptide) bonds AT2G27450 (NLP1) transcript variant AT2G27450.1 mRNA, complete cds Length = 1245 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 ggttcagaaccaatagcagtgggatagaacaatatttc 601 |||||||||||||||||||||||||| |||| |||||| Sbjct: 679 ggttcagaaccaatagcagtgggataaaacagtatttc 642
>ref|NM_179770.1| Arabidopsis thaliana NLP1 (NITRILASE-LIKE PROTEIN 1); hydrolase, acting on carbon-nitrogen (but not peptide) bonds AT2G27450 (NLP1) transcript variant AT2G27450.2 mRNA, complete cds Length = 1236 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 ggttcagaaccaatagcagtgggatagaacaatatttc 601 |||||||||||||||||||||||||| |||| |||||| Sbjct: 668 ggttcagaaccaatagcagtgggataaaacagtatttc 631
>gb|AY122963.1| Arabidopsis thaliana putative nitrilase (At2g27450) mRNA, complete cds Length = 1012 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 ggttcagaaccaatagcagtgggatagaacaatatttc 601 |||||||||||||||||||||||||| |||| |||||| Sbjct: 647 ggttcagaaccaatagcagtgggataaaacagtatttc 610
>gb|AY072113.1| Arabidopsis thaliana putative nitrilase (At2g27450) mRNA, complete cds Length = 1253 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 ggttcagaaccaatagcagtgggatagaacaatatttc 601 |||||||||||||||||||||||||| |||| |||||| Sbjct: 668 ggttcagaaccaatagcagtgggataaaacagtatttc 631
>gb|AC006232.4| Arabidopsis thaliana chromosome 2 clone F10A12 map B68, complete sequence Length = 90341 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 564 ggttcagaaccaatagcagtgggatagaacaatatttc 601 |||||||||||||||||||||||||| |||| |||||| Sbjct: 43330 ggttcagaaccaatagcagtgggataaaacagtatttc 43367
>emb|BX821518.1|CNS0AAAM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL48ZA10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1019 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 ggttcagaaccaatagcagtgggatagaacaatatttc 601 |||||||||||||||||||||||||| |||| |||||| Sbjct: 591 ggttcagaaccaatagcagtgggataaaacactatttc 554
>gb|AY086056.1| Arabidopsis thaliana clone 20875 mRNA, complete sequence Length = 1165 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 ggttcagaaccaatagcagtgggatagaacaatatttc 601 |||||||||||||||||||||||||| |||| |||||| Sbjct: 679 ggttcagaaccaatagcagtgggataaaacagtatttc 642
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 508 catggccttgcatgacacgcttccagtgttca 539 |||||||||||||||||| | ||||||||||| Sbjct: 1831371 catggccttgcatgacacacctccagtgttca 1831402 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacac 525 |||||| ||||||| |||||||||||||||||| Sbjct: 27367875 accaagctagcgccaacatggccttgcatgacac 27367842
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0009H02 Length = 155388 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 508 catggccttgcatgacacgcttccagtgttca 539 |||||||||||||||||| | ||||||||||| Sbjct: 113732 catggccttgcatgacacacctccagtgttca 113763
>gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosome 6, complete sequence Length = 216271 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 53 tatttttattgatgttatatatt 75 ||||||||||||||||||||||| Sbjct: 118070 tatttttattgatgttatatatt 118048 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 tatttttattgatgttatatat 74 |||||||||||||||||||||| Sbjct: 2703 tatttttattgatgttatatat 2682
>gb|AC137735.5| Homo sapiens chromosome 17, clone CTD-2582D11, complete sequence Length = 169483 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 181 ttgtggagctcatttcctctttc 203 ||||||||||||||||||||||| Sbjct: 130791 ttgtggagctcatttcctctttc 130769
>dbj|AP004503.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02M03, TM0034a, complete sequence Length = 83232 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 221 ggatgatgatgatgtcttgccat 243 ||||||||||||||||||||||| Sbjct: 51779 ggatgatgatgatgtcttgccat 51757
>ref|XM_469009.1| Oryza sativa (japonica cultivar-group), mRNA Length = 885 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 345 agcacctcctcgtccttgtcgt 366 |||||||||||||||||||||| Sbjct: 764 agcacctcctcgtccttgtcgt 743
>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete sequence Length = 120254 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 345 agcacctcctcgtccttgtcgt 366 |||||||||||||||||||||| Sbjct: 98069 agcacctcctcgtccttgtcgt 98048
>gb|DQ191642.1| Solanum tuberosum beta-alanine synthase-like protein mRNA, complete cds Length = 1228 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 564 ggttcagaaccaatagcagtgggatagaacaata 597 |||||||||||||| ||||| || |||||||||| Sbjct: 600 ggttcagaaccaattgcagtagggtagaacaata 567
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 345 agcacctcctcgtccttgtcgt 366 |||||||||||||||||||||| Sbjct: 24375888 agcacctcctcgtccttgtcgt 24375909 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 508 catggccttgcatgacacgcttccagtgttca 539 |||| ||||||||| || |||||||||||||| Sbjct: 27584002 catgaccttgcatggcatgcttccagtgttca 27583971
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 345 agcacctcctcgtccttgtcgt 366 |||||||||||||||||||||| Sbjct: 4736 agcacctcctcgtccttgtcgt 4715
>emb|Y19104.1|LES19104 Lycopersicon esculentum mRNA for beta-alanine synthase Length = 1144 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 564 ggttcagaaccaatagcagtgggatagaacaata 597 |||||||||||||| ||||| || |||||||||| Sbjct: 566 ggttcagaaccaattgcagtagggtagaacaata 533
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 345 agcacctcctcgtccttgtcgt 366 |||||||||||||||||||||| Sbjct: 24293357 agcacctcctcgtccttgtcgt 24293378 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 508 catggccttgcatgacacgcttccagtgttca 539 |||| ||||||||| || |||||||||||||| Sbjct: 27675325 catgaccttgcatggcatgcttccagtgttca 27675294
>gb|AC140334.3| Mus musculus BAC clone RP23-244J7 from chromosome 6, complete sequence Length = 192598 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 tatttttattgatgttatatat 74 |||||||||||||||||||||| Sbjct: 157196 tatttttattgatgttatatat 157217 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 tatttttattgatgttatatat 74 |||||||||||||||||||||| Sbjct: 39974 tatttttattgatgttatatat 39995
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacac 525 |||||| ||||||| |||||||||||||||||| Sbjct: 69402 accaagctagcgccaacatggccttgcatgacac 69369
>dbj|AK108094.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-A06, full insert sequence Length = 1431 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 345 agcacctcctcgtccttgtcgt 366 |||||||||||||||||||||| Sbjct: 862 agcacctcctcgtccttgtcgt 841
>dbj|AK063184.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-B02, full insert sequence Length = 703 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 492 accaagttagcgccggcatggccttgcatgacac 525 |||||| ||||||| |||||||||||||||||| Sbjct: 184 accaagctagcgccaacatggccttgcatgacac 151
>gb|AC163709.3| Gallus gallus BAC clone CH261-60F22 from chromosome ul, complete sequence Length = 210984 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ttgtggagctcatttcctctttcata 206 ||||||||||||||||| |||||||| Sbjct: 147760 ttgtggagctcatttcccctttcata 147785
>emb|AL354743.33| Human DNA sequence from clone RP4-785P20 on chromosome 1p36.23-36.33 Contains the 3' end of the PRDM16 gene for PR domain containing 16 and two CpG islands, complete sequence Length = 140572 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ctctgccaccagcacctcctc 355 ||||||||||||||||||||| Sbjct: 14673 ctctgccaccagcacctcctc 14693
>gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169964 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 atttcctctttcataaaaagtggaa 216 |||||||| |||||||||||||||| Sbjct: 103666 atttcctcattcataaaaagtggaa 103642
>gb|AC117376.3| Homo sapiens 12 BAC RP11-349K16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177041 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 catttcctctttcataaaaag 211 ||||||||||||||||||||| Sbjct: 13180 catttcctctttcataaaaag 13200
>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0082P17, complete sequence Length = 157539 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 catggccttgcatgacacgcttcc 531 |||| ||||||||||||||||||| Sbjct: 41172 catgaccttgcatgacacgcttcc 41149
>gb|AC140232.2| Mus musculus BAC clone RP24-498F17 from chromosome 5, complete sequence Length = 183612 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 cctctttcataaaaagtgga 215 |||||||||||||||||||| Sbjct: 153310 cctctttcataaaaagtgga 153291
>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030I07, complete sequence Length = 122733 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 catggccttgcatgacacgcttcc 531 |||| ||||||||||||||||||| Sbjct: 93153 catgaccttgcatgacacgcttcc 93130
>emb|CR450706.7| Zebrafish DNA sequence from clone CH211-14K11 in linkage group 25, complete sequence Length = 192643 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 gtatttttattgatgttatatatt 75 ||||||||||| |||||||||||| Sbjct: 27811 gtatttttattaatgttatatatt 27788
>ref|XM_741110.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000863.01.0) partial mRNA Length = 1416 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 gtatttttattgatgttatatatt 75 ||||||||||||||||| |||||| Sbjct: 1114 gtatttttattgatgttttatatt 1091
>ref|XM_501190.1| Yarrowia lipolytica CLIB122, YALI0B21626g predicted mRNA Length = 3594 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ccagcacctcctcgtccttg 362 |||||||||||||||||||| Sbjct: 3523 ccagcacctcctcgtccttg 3504
>emb|AL136100.12| Human DNA sequence from clone RP11-534P19 on chromosome 6 Contains a pseudogene similar to zinc finger proteins, complete sequence Length = 172212 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ttttattgatgttatatatt 75 |||||||||||||||||||| Sbjct: 64231 ttttattgatgttatatatt 64212
>gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166471 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 ggtatttttattgatgttatatat 74 ||||| |||||||||||||||||| Sbjct: 40135 ggtatatttattgatgttatatat 40158
>emb|CR626903.5| Zebrafish DNA sequence from clone CH211-262A22 in linkage group 16, complete sequence Length = 143457 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 catatcctggggttcagaac 573 |||||||||||||||||||| Sbjct: 31834 catatcctggggttcagaac 31815
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 catggccttgcatgacacgcttcc 531 |||| ||||||||||||||||||| Sbjct: 26630895 catgaccttgcatgacacgcttcc 26630872
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 512 gccttgcatgacacgcttccagtgttca 539 ||||||||||||||||| ||||||||| Sbjct: 2172458 gccttgcatgacacgctcacagtgttca 2172485
>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence, complete sequence Length = 136982 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 508 catggccttgcatgacacgcttccagtgttca 539 |||| ||||||||| || |||||||||||||| Sbjct: 25699 catgaccttgcatggcatgcttccagtgttca 25668
>dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B11 Length = 179858 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 512 gccttgcatgacacgcttccagtgttca 539 ||||||||||||||||| ||||||||| Sbjct: 34296 gccttgcatgacacgctcacagtgttca 34323
>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1610_C11 Length = 104553 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 512 gccttgcatgacacgcttccagtgttca 539 ||||||||||||||||| ||||||||| Sbjct: 97875 gccttgcatgacacgctcacagtgttca 97902
>gb|AC005323.1|AC005323 Homo sapiens chromosome 17, clone hRPK.799_N_11, complete sequence Length = 204082 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 gtactttgtatagatcaggg 275 |||||||||||||||||||| Sbjct: 96369 gtactttgtatagatcaggg 96350
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 catggccttgcatgacacgcttcc 531 |||| ||||||||||||||||||| Sbjct: 26956159 catgaccttgcatgacacgcttcc 26956136
>gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complete sequence Length = 195371 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 cctctttcataaaaagtgga 215 |||||||||||||||||||| Sbjct: 38316 cctctttcataaaaagtgga 38297
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ttgccatgctcagtctcgac 454 |||||||||||||||||||| Sbjct: 2749568 ttgccatgctcagtctcgac 2749587
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ccagcacctcctcgtccttg 362 |||||||||||||||||||| Sbjct: 2844730 ccagcacctcctcgtccttg 2844749
>emb|AL837522.8| Mouse DNA sequence from clone RP23-264L10 on chromosome 4, complete sequence Length = 128976 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gtcagcagtactttgtatag 268 |||||||||||||||||||| Sbjct: 123407 gtcagcagtactttgtatag 123388
>emb|AL645468.11| Mouse DNA sequence from clone RP23-246F18 on chromosome 4, complete sequence Length = 209764 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 tgtggagctcatttcctctt 201 |||||||||||||||||||| Sbjct: 47122 tgtggagctcatttcctctt 47141
>emb|AL662835.11| Mouse DNA sequence from clone RP23-458A23 on chromosome 11, complete sequence Length = 162024 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 ccgtttgtccgtttggtgttctcc 175 ||||||||||||||||| |||||| Sbjct: 8412 ccgtttgtccgtttggttttctcc 8389 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,207,601 Number of Sequences: 3902068 Number of extensions: 5207601 Number of successful extensions: 109946 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109380 Number of HSP's gapped (non-prelim): 566 length of query: 607 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 584 effective length of database: 17,143,297,704 effective search space: 10011685859136 effective search space used: 10011685859136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)