ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal10c06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097G12, full insert sequence Length = 1043 Score = 642 bits (324), Expect = 0.0 Identities = 459/504 (91%) Strand = Plus / Minus Query: 177 ggatcttcaagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtc 236 ||||||| |||| ||||| ||||| ||||| || ||||||||||| |||||||| ||||| Sbjct: 705 ggatctttaagaaggcatatatgtcgaagtatcaatctgctcaggaagctcctttatgtc 646 Query: 237 aacctcaaacctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaa 296 |||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||| Sbjct: 645 aacctcgaatctttcttgcacttgattaagaacatcagagtcagaggcagaggaaacaaa 586 Query: 297 tgttattgcaagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgt 356 |||||||||||| |||||||||||||||||||||||||||||||||||||| | || | Sbjct: 585 tgttattgcaagtcctttggttccaaaacgcccagcccttccaaccctgtgtagatacga 526 Query: 357 atcagcagaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccc 416 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 525 atcagcagaatcgggcatgtcatagtttatgacaatgttgacacgttcaatatcaattcc 466 Query: 417 cctgccaactaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttata 476 ||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 465 cctgccaactaaatcagtagccacaagaatcctcttgtgtccttccttgaagttcttgta 406 Query: 477 ccgggtcagcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgca 536 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||| ||||| Sbjct: 405 ccgggtaagcctctcctcctgtgtcattccagaatgtatggagatcgcaggaaagttgca 346 Query: 537 ttcacagagcagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaat 596 |||||| |||||| |||| ||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 345 ttcacaaagcagcttgttcagttctgcagctctactaacacttttaacaaatatcacaac 286 Query: 597 ttggttgaagtcgagcgcatctaagagatcattcaattttcgattcttctccgcctcact 656 ||| |||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 285 ttgattgaagtccagtgcatctaagagatcattcaatttccggttcttctccgcctcact 226 Query: 657 tagtttaatatagtgctgaactag 680 |||||||||||||||||||||||| Sbjct: 225 tagtttaatatagtgctgaactag 202
>ref|NM_193389.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 Score = 634 bits (320), Expect = e-179 Identities = 452/496 (91%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| ||||| ||||| ||||| || ||||||||||| |||||||| ||||||||||| | Sbjct: 1294 aagaaggcatatatgtcgaagtatcaatctgctcaggaagctcctttatgtcaacctcga 1235 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 | ||||||||||| ||||| ||||| ||||||||||||||||| | |||||||||||||| Sbjct: 1234 atctttcttgcacttgattaagaacatcagagtcagaggcagaggaaacaaatgttattg 1175 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| |||||||||||||||||||||||||||||||||||||| | || | |||||||| Sbjct: 1174 caagtcctttggttccaaaacgcccagcccttccaaccctgtgtagatacgaatcagcag 1115 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 1114 aatcgggcatgtcatagtttatgacaatgttgacacgttcaatatcaattcccctgccaa 1055 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtca 484 ||||||| ||||||||||| ||||||||||| || |||||||||||||| |||||||| | Sbjct: 1054 ctaaatcagtagccacaagaatcctcttgtgtccttccttgaagttcttgtaccgggtaa 995 Query: 485 gcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattcacaga 544 |||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| | Sbjct: 994 gcctctcctcctgtgtcattccagaatgtatggagatcgcaggaaagttgcattcacaaa 935 Query: 545 gcagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatttggttga 604 ||||| |||| ||||||| ||| |||| ||||||||||||||||||||||| ||| |||| Sbjct: 934 gcagcttgttcagttctgcagctctactaacacttttaacaaatatcacaacttgattga 875 Query: 605 agtcgagcgcatctaagagatcattcaattttcgattcttctccgcctcacttagtttaa 664 |||| || ||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 874 agtccagtgcatctaagagatcattcaatttccggttcttctccgcctcacttagtttaa 815 Query: 665 tatagtgctgaactag 680 |||||||||||||||| Sbjct: 814 tatagtgctgaactag 799
>dbj|AK067431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107H03, full insert sequence Length = 1866 Score = 634 bits (320), Expect = e-179 Identities = 458/504 (90%) Strand = Plus / Minus Query: 177 ggatcttcaagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtc 236 ||||||| |||| ||||| ||||| ||||| || ||||||||||| |||||||| ||||| Sbjct: 1498 ggatctttaagaaggcatatatgtcgaagtatcaatctgctcaggaagctcctttatgtc 1439 Query: 237 aacctcaaacctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaa 296 |||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||| Sbjct: 1438 aacctcgaatctttcttgcacttgattaagaacatcagagtcagaggcagaggaaacaaa 1379 Query: 297 tgttattgcaagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgt 356 |||||||||||| |||||||||||||||||||||||||||||||||||||| | || | Sbjct: 1378 tgttattgcaagtcctttggttccaaaacgcccagcccttccaaccctgtgtagatacga 1319 Query: 357 atcagcagaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccc 416 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 1318 atcagcagaatcgggcatgtcatagtttatgacaatgttgacacgttcaatatcaattcc 1259 Query: 417 cctgccaactaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttata 476 ||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 1258 cctgccaactaaatcagtagccacaagaatcctcttgtgtccttccttgaagttcttgta 1199 Query: 477 ccgggtcagcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgca 536 |||||| ||||||||||||||||||||||||||||||||| |||| |||||||| ||||| Sbjct: 1198 ccgggtaagcctctcctcctgtgtcattccagaatgtatggagatcgcaggaaagttgca 1139 Query: 537 ttcacagagcagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaat 596 |||||| |||||| |||| ||||||| ||| |||| ||||||||||||||||||||| | Sbjct: 1138 ttcacaaagcagcttgttcagttctgcagctctactaacacttttaacaaatatcacgac 1079 Query: 597 ttggttgaagtcgagcgcatctaagagatcattcaattttcgattcttctccgcctcact 656 ||| |||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 1078 ttgattgaagtccagtgcatctaagagatcattcaatttccggttcttctccgcctcact 1019 Query: 657 tagtttaatatagtgctgaactag 680 |||||||||||||||||||||||| Sbjct: 1018 tagtttaatatagtgctgaactag 995
>dbj|AK122050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G10, full insert sequence Length = 1731 Score = 620 bits (313), Expect = e-174 Identities = 454/501 (90%) Strand = Plus / Minus Query: 177 ggatcttcaagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtc 236 ||||||| | || ||||| ||||| ||||| || ||||||||||| |||||||| ||||| Sbjct: 1393 ggatctttacgaaggcatatatgtcgaagtatcaatctgctcaggaagctcctttatgtc 1334 Query: 237 aacctcaaacctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaa 296 |||||| || ||||||||||| ||||| ||||| |||||||| |||||||| | |||||| Sbjct: 1333 aacctcgaatctttcttgcacttgattaagaacatcagagtctgaggcagaggaaacaaa 1274 Query: 297 tgttattgcaagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgt 356 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || | Sbjct: 1273 tgttattgcaagtcctttggttccaaaacgtccagcccttccaaccctgtgcaaatacga 1214 Query: 357 atcagcagaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccc 416 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 1213 gtcagcagaatcgggcatgtcatagtttatgacaatgttgacacgttcaatatcaattcc 1154 Query: 417 cctgccaactaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttata 476 ||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 1153 cctgccaactaaatcagtagccacaagaatcctcttgtgtccttccttgaagttcttgta 1094 Query: 477 ccgggtcagcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgca 536 |||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| Sbjct: 1093 ccgggtcagcctctcctcctgtgtcattccagaatgtatggagatcgcaggaaagttgca 1034 Query: 537 ttcacagagcagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaat 596 |||||| |||||| |||| ||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 1033 ttcacaaagcagcttgttcagttctgcagctctactaacacttttaacaaatatcacaac 974 Query: 597 ttggttgaagtcgagcgcatctaagagatcattcaattttcgattcttctccgcctcact 656 ||| |||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 973 ttgattgaagtcaagtgcatctaagagatcattcaatttccggttcttctccgcctcact 914 Query: 657 tagtttaatatagtgctgaac 677 |||||| |||||||||||||| Sbjct: 913 tagttttatatagtgctgaac 893
>ref|NM_193392.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1365 Score = 553 bits (279), Expect = e-154 Identities = 384/419 (91%) Strand = Plus / Minus Query: 259 tgattgagaacgtcagagtcagaggcagaagcaacaaatgttattgcaagccctttggtt 318 ||||| ||||| |||||||| |||||||| | |||||||||||||||||| ||||||||| Sbjct: 1259 tgattaagaacatcagagtctgaggcagaggaaacaaatgttattgcaagtcctttggtt 1200 Query: 319 ccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcagaatcgggcatgtca 378 |||||||| ||||||||||||||||||||||| || | ||||||||||||||||||||| Sbjct: 1199 ccaaaacgtccagcccttccaaccctgtgcaaatacgagtcagcagaatcgggcatgtca 1140 Query: 379 tagtttatgacaatattgacacgctcaatatcaatccccctgccaactaaatccgtagcc 438 |||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 1139 tagtttatgacaatgttgacacgttcaatatcaattcccctgccaactaaatcagtagcc 1080 Query: 439 acaaggatcctcttgtgcccctccttgaagttcttataccgggtcagcctctcctcctgt 498 ||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 1079 acaagaatcctcttgtgtccttccttgaagttcttgtaccgggtcagcctctcctcctgt 1020 Query: 499 gtcattccagaatgtatgcagattgcaggaaaattgcattcacagagcagcctgttaagt 558 |||||||||||||||||| |||| |||||||| ||||||||||| |||||| |||| ||| Sbjct: 1019 gtcattccagaatgtatggagatcgcaggaaagttgcattcacaaagcagcttgttcagt 960 Query: 559 tctgaagccctaccaacacttttaacaaatatcacaatttggttgaagtcgagcgcatct 618 |||| ||| |||| ||||||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 959 tctgcagctctactaacacttttaacaaatatcacaacttgattgaagtcaagtgcatct 900 Query: 619 aagagatcattcaattttcgattcttctccgcctcacttagtttaatatagtgctgaac 677 ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| Sbjct: 899 aagagatcattcaatttccggttcttctccgcctcacttagttttatatagtgctgaac 841
>gb|AY107107.1| Zea mays PCO088497 mRNA sequence Length = 818 Score = 464 bits (234), Expect = e-127 Identities = 411/470 (87%) Strand = Plus / Minus Query: 178 gatcttcaagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtca 237 |||| |||||||||||||||||| || ||||| |||||||||||||||||||| |||||| Sbjct: 479 gatcatcaagatggcatgtatgtcgacgtgtcaatctgctcaggcagctcctttatgtca 420 Query: 238 acctcaaacctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaat 297 ||||||||||| || ||||| ||||||||||| ||||| ||||| | ||||| ||||||| Sbjct: 419 acctcaaacctctcctgcacttgattgagaacatcagaatcagatgaagaagaaacaaat 360 Query: 298 gttattgcaagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgta 357 ||||||||||| || ||||| |||||||| ||||||| |||||||| |||| ||||||| Sbjct: 359 gttattgcaagtcccttggtaccaaaacgtccagcccgaccaaccctatgcaggtatgta 300 Query: 358 tcagcagaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatcccc 417 ||||| ||||| ||||| |||||||||| |||||| |||||||| ||||| || || ||| Sbjct: 299 tcagcggaatcaggcatatcatagtttacgacaatgttgacacgttcaatgtcgattccc 240 Query: 418 ctgccaactaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttatac 477 || ||||| ||||| ||||||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 239 ctaccaaccaaatcagtagccacaagaatcctcttgtgtccttccttgaagttcttgtac 180 Query: 478 cgggtcagcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcat 537 || |||| |||||| ||||||||||||||||||||||| ||||||| || |||||||| Sbjct: 179 cgtgtcaacctctcttcctgtgtcattccagaatgtatacagattgaggggaaattgcac 120 Query: 538 tcacagagcagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatt 597 || ||||||| |||| ||||||| ||| |||| ||||||||||||||||||||||| | Sbjct: 119 tcgcagagcaatttgttgagttctgcagctctactaacacttttaacaaatatcacaact 60 Query: 598 tggttgaagtcgagcgcatctaagagatcattcaattttcgattcttctc 647 |||||||||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct: 59 tggttgaagtcgagtgcatctaaaagatcgttcaactttcggttcttctc 10
>gb|AY111309.1| Zea mays CL2925_2 mRNA sequence Length = 1457 Score = 373 bits (188), Expect = e-100 Identities = 413/488 (84%) Strand = Plus / Minus Query: 187 gatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaaac 246 ||||||||||| || || ||||| || ||||||||||| ||||| ||||| ||||||||| Sbjct: 1117 gatggcatgtaggtcgaggtgtcaatttgctcaggcagttcctttatgtctacctcaaac 1058 Query: 247 ctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattgca 306 |||||||||||||| || ||||| ||||| || || ||||| | |||||| || |||||| Sbjct: 1057 ctttcttgcacctggttaagaacatcagaatccgaagcagaggaaacaaaggtaattgca 998 Query: 307 agccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcagaa 366 || || || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 997 agtcccttcgtgccaaaacgtccagcccttccaaccctgtgcaaataagtatcagctgag 938 Query: 367 tcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaact 426 || ||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 937 tctggcatgtcatagtttatcacaatgttgacacgctcaatgtcaatgcccctgccaact 878 Query: 427 aaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtcagc 486 ||||| ||||||||||| || |||||||| || ||||||||||||||||| | || ||| Sbjct: 877 aaatctgtagccacaagaattctcttgtggccttccttgaagttcttatatcttgttagc 818 Query: 487 ctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattcacagagc 546 || || ||||| |||||||||||||| |||||||||| || || ||||||||||| || Sbjct: 817 ctttcttcctgagtcattccagaatgaatgcagattgatgggaagttgcattcacaaagt 758 Query: 547 agcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatttggttgaag 606 | | | || ||||| | ||| || | |||||| || || |||||||||| ||||||||| Sbjct: 757 aacttattcagttcggcagctctgctaacactcttcacgaatatcacaacttggttgaaa 698 Query: 607 tcgagcgcatctaagagatcattcaattttcgattcttctccgcctcacttagtttaata 666 || || || || ||||||||||||| ||| || |||||||| |||||||| ||||| ||| Sbjct: 697 tcaagagcgtccaagagatcattcagtttccggttcttctctgcctcactaagttttata 638 Query: 667 tagtgctg 674 |||||||| Sbjct: 637 tagtgctg 630
>gb|BT019131.1| Zea mays clone Contig764.F mRNA sequence Length = 967 Score = 365 bits (184), Expect = 1e-97 Identities = 412/488 (84%) Strand = Plus / Minus Query: 187 gatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaaac 246 ||||||||||| || || ||||| || ||||||||||| ||||| ||||| ||||||||| Sbjct: 696 gatggcatgtaggtcgaggtgtcaatttgctcaggcagttcctttatgtctacctcaaac 637 Query: 247 ctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattgca 306 |||||||||||||| || ||||| ||||| || || ||||| | |||||| || |||||| Sbjct: 636 ctttcttgcacctggttaagaacatcagaatccgaagcagaggaaacaaaggtaattgca 577 Query: 307 agccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcagaa 366 || || || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 576 agtcccttcgtgccaaaacgtccagcccttccaaccctgtgcaaataagtatcagctgag 517 Query: 367 tcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaact 426 || ||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 516 tctggcatgtcatagtttatcacaatgttgacacgctcaatgtcaatgcccctgccaact 457 Query: 427 aaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtcagc 486 ||||| ||||||||||| || |||||||| || ||||||||||||||||| | || ||| Sbjct: 456 aaatctgtagccacaagaattctcttgtggccttccttgaagttcttatatcttgttagc 397 Query: 487 ctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattcacagagc 546 || || ||||| |||||||||||||| |||||||||| || || ||||||||||| || Sbjct: 396 ctttcttcctgagtcattccagaatgaatgcagattgatgggaagttgcattcacaaagt 337 Query: 547 agcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatttggttgaag 606 | | | || ||||| | ||| || | |||||| || || |||||||||| ||||||||| Sbjct: 336 aacttattcagttcggcagctctgctaacactcttcacgaatatcacaacttggttgaaa 277 Query: 607 tcgagcgcatctaagagatcattcaattttcgattcttctccgcctcacttagtttaata 666 || || || || ||||||||||||| ||| || |||||||| ||||| || ||||| ||| Sbjct: 276 tcaagagcgtccaagagatcattcagtttccggttcttctctgcctcgctaagttttata 217 Query: 667 tagtgctg 674 |||||||| Sbjct: 216 tagtgctg 209
>gb|AY103872.1| Zea mays PCO139073 mRNA sequence Length = 1785 Score = 365 bits (184), Expect = 1e-97 Identities = 412/488 (84%) Strand = Plus / Minus Query: 187 gatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaaac 246 ||||||||||| || || ||||| || ||||||||||| ||||| ||||| ||||||||| Sbjct: 1488 gatggcatgtaggtcgaggtgtcaatttgctcaggcagttcctttatgtctacctcaaac 1429 Query: 247 ctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattgca 306 |||||||||||||| || ||||| ||||| || || ||||| | |||||| || |||||| Sbjct: 1428 ctttcttgcacctggttaagaacatcagaatccgaagcagaggaaacaaaggtaattgca 1369 Query: 307 agccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcagaa 366 || || || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 1368 agtcccttcgtgccaaaacgtccagcccttccaaccctgtgcaaataagtatcagctgag 1309 Query: 367 tcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaact 426 || ||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 1308 tctggcatgtcatagtttatcacaatgttgacacgctcaatgtcaatgcccctgccaact 1249 Query: 427 aaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtcagc 486 ||||| ||||||||||| || |||||||| || ||||||||||||||||| | || ||| Sbjct: 1248 aaatctgtagccacaagaattctcttgtggccttccttgaagttcttatatcttgttagc 1189 Query: 487 ctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattcacagagc 546 || || ||||| |||||||||||||| |||||||||| || || ||||||||||| || Sbjct: 1188 ctttcttcctgagtcattccagaatgaatgcagattgatgggaagttgcattcacaaagt 1129 Query: 547 agcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatttggttgaag 606 | | | || ||||| | ||| || | |||||| || || |||||||||| ||||||||| Sbjct: 1128 aacttattcagttcggcagctctgctaacactcttcacgaatatcacaacttggttgaaa 1069 Query: 607 tcgagcgcatctaagagatcattcaattttcgattcttctccgcctcacttagtttaata 666 || || || || ||||||||||||| ||| || |||||||| ||||| || ||||| ||| Sbjct: 1068 tcaagagcgtccaagagatcattcagtttccggttcttctctgcctcgctaagttttata 1009 Query: 667 tagtgctg 674 |||||||| Sbjct: 1008 tagtgctg 1001
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 256 bits (129), Expect = 8e-65 Identities = 174/189 (92%) Strand = Plus / Minus Query: 486 cctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattcacagag 545 ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| || Sbjct: 20540800 cctctcctcctgtgtcattccagaatgtatggagatcgcaggaaagttgcattcacaaag 20540741 Query: 546 cagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatttggttgaa 605 |||| |||| ||||||| ||| |||| ||||||||||||||||||||||| ||| ||||| Sbjct: 20540740 cagcttgttcagttctgcagctctactaacacttttaacaaatatcacaacttgattgaa 20540681 Query: 606 gtcgagcgcatctaagagatcattcaattttcgattcttctccgcctcacttagtttaat 665 ||| || ||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 20540680 gtccagtgcatctaagagatcattcaatttccggttcttctccgcctcacttagtttaat 20540621 Query: 666 atagtgctg 674 ||||||||| Sbjct: 20540620 atagtgctg 20540612 Score = 248 bits (125), Expect = 2e-62 Identities = 173/189 (91%) Strand = Plus / Minus Query: 486 cctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattcacagag 545 ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| || Sbjct: 20570640 cctctcctcctgtgtcattccagaatgtatggagatcgcaggaaagttgcattcacaaag 20570581 Query: 546 cagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatttggttgaa 605 |||| |||| ||||||| ||| |||| ||||||||||||||||||||||| ||| ||||| Sbjct: 20570580 cagcttgttcagttctgcagctctactaacacttttaacaaatatcacaacttgattgaa 20570521 Query: 606 gtcgagcgcatctaagagatcattcaattttcgattcttctccgcctcacttagtttaat 665 ||| || ||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 20570520 gtcaagtgcatctaagagatcattcaatttccggttcttctccgcctcacttagttttat 20570461 Query: 666 atagtgctg 674 ||||||||| Sbjct: 20570460 atagtgctg 20570452 Score = 200 bits (101), Expect = 4e-48 Identities = 137/149 (91%) Strand = Plus / Minus Query: 340 accctgtgcaagtatgtatcagcagaatcgggcatgtcatagtttatgacaatattgaca 399 ||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 20571562 accctgtgcaaatacgagtcagcagaatcgggcatgtcatagtttatgacaatgttgaca 20571503 Query: 400 cgctcaatatcaatccccctgccaactaaatccgtagccacaaggatcctcttgtgcccc 459 || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 20571502 cgttcaatatcaattcccctgccaactaaatcagtagccacaagaatcctcttgtgtcct 20571443 Query: 460 tccttgaagttcttataccgggtcagcct 488 |||||||||||||| |||||||||||||| Sbjct: 20571442 tccttgaagttcttgtaccgggtcagcct 20571414 Score = 190 bits (96), Expect = 4e-45 Identities = 123/132 (93%) Strand = Plus / Minus Query: 357 atcagcagaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccc 416 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 20542381 atcagcagaatcgggcatgtcatagtttatgacaatgttgacacgttcaatatcaattcc 20542322 Query: 417 cctgccaactaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttata 476 ||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 20542321 cctgccaactaaatcagtagccacaagaatcctcttgtgtccttccttgaagttcttgta 20542262 Query: 477 ccgggtcagcct 488 |||||| ||||| Sbjct: 20542261 ccgggtaagcct 20542250 Score = 127 bits (64), Expect = 5e-26 Identities = 79/84 (94%) Strand = Plus / Minus Query: 259 tgattgagaacgtcagagtcagaggcagaagcaacaaatgttattgcaagccctttggtt 318 ||||| ||||| ||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 20542545 tgattaagaacatcagagtcagaggcagaggaaacaaatgttattgcaagtcctttggtt 20542486 Query: 319 ccaaaacgcccagcccttccaacc 342 |||||||||||||||||||||||| Sbjct: 20542485 ccaaaacgcccagcccttccaacc 20542462 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 259 tgattgagaacgtcagagtcagaggcagaagcaacaaatgttattgcaagccctttggtt 318 ||||| ||||| |||||||| |||||||| | |||||||||||||||||| ||||||||| Sbjct: 20571712 tgattaagaacatcagagtctgaggcagaggaaacaaatgttattgcaagtcctttggtt 20571653 Query: 319 ccaaaacgcccagcccttccaacc 342 |||||||| ||||||||||||||| Sbjct: 20571652 ccaaaacgtccagcccttccaacc 20571629 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 196 tatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaaacctttcttgc 255 ||||| ||||| || ||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 20571859 tatgtcgaagtatcaatctgctcaggaagctcctttatgtcaacctcgaatctttcttgc 20571800 Query: 256 acct 259 |||| Sbjct: 20571799 acct 20571796 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 196 tatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaaacctttcttgc 255 ||||| ||||| || ||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 20542695 tatgtcgaagtatcaatctgctcaggaagctcctttatgtcaacctcgaatctttcttgc 20542636 Query: 256 acct 259 |||| Sbjct: 20542635 acct 20542632
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 256 bits (129), Expect = 8e-65 Identities = 174/189 (92%) Strand = Plus / Minus Query: 486 cctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattcacagag 545 ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| || Sbjct: 2776 cctctcctcctgtgtcattccagaatgtatggagatcgcaggaaagttgcattcacaaag 2717 Query: 546 cagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatttggttgaa 605 |||| |||| ||||||| ||| |||| ||||||||||||||||||||||| ||| ||||| Sbjct: 2716 cagcttgttcagttctgcagctctactaacacttttaacaaatatcacaacttgattgaa 2657 Query: 606 gtcgagcgcatctaagagatcattcaattttcgattcttctccgcctcacttagtttaat 665 ||| || ||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 2656 gtccagtgcatctaagagatcattcaatttccggttcttctccgcctcacttagtttaat 2597 Query: 666 atagtgctg 674 ||||||||| Sbjct: 2596 atagtgctg 2588 Score = 248 bits (125), Expect = 2e-62 Identities = 173/189 (91%) Strand = Plus / Minus Query: 486 cctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattcacagag 545 ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| || Sbjct: 32616 cctctcctcctgtgtcattccagaatgtatggagatcgcaggaaagttgcattcacaaag 32557 Query: 546 cagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatttggttgaa 605 |||| |||| ||||||| ||| |||| ||||||||||||||||||||||| ||| ||||| Sbjct: 32556 cagcttgttcagttctgcagctctactaacacttttaacaaatatcacaacttgattgaa 32497 Query: 606 gtcgagcgcatctaagagatcattcaattttcgattcttctccgcctcacttagtttaat 665 ||| || ||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 32496 gtcaagtgcatctaagagatcattcaatttccggttcttctccgcctcacttagttttat 32437 Query: 666 atagtgctg 674 ||||||||| Sbjct: 32436 atagtgctg 32428 Score = 200 bits (101), Expect = 4e-48 Identities = 137/149 (91%) Strand = Plus / Minus Query: 340 accctgtgcaagtatgtatcagcagaatcgggcatgtcatagtttatgacaatattgaca 399 ||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 33538 accctgtgcaaatacgagtcagcagaatcgggcatgtcatagtttatgacaatgttgaca 33479 Query: 400 cgctcaatatcaatccccctgccaactaaatccgtagccacaaggatcctcttgtgcccc 459 || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 33478 cgttcaatatcaattcccctgccaactaaatcagtagccacaagaatcctcttgtgtcct 33419 Query: 460 tccttgaagttcttataccgggtcagcct 488 |||||||||||||| |||||||||||||| Sbjct: 33418 tccttgaagttcttgtaccgggtcagcct 33390 Score = 190 bits (96), Expect = 4e-45 Identities = 123/132 (93%) Strand = Plus / Minus Query: 357 atcagcagaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccc 416 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 4357 atcagcagaatcgggcatgtcatagtttatgacaatgttgacacgttcaatatcaattcc 4298 Query: 417 cctgccaactaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttata 476 ||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 4297 cctgccaactaaatcagtagccacaagaatcctcttgtgtccttccttgaagttcttgta 4238 Query: 477 ccgggtcagcct 488 |||||| ||||| Sbjct: 4237 ccgggtaagcct 4226 Score = 127 bits (64), Expect = 5e-26 Identities = 79/84 (94%) Strand = Plus / Minus Query: 259 tgattgagaacgtcagagtcagaggcagaagcaacaaatgttattgcaagccctttggtt 318 ||||| ||||| ||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 4521 tgattaagaacatcagagtcagaggcagaggaaacaaatgttattgcaagtcctttggtt 4462 Query: 319 ccaaaacgcccagcccttccaacc 342 |||||||||||||||||||||||| Sbjct: 4461 ccaaaacgcccagcccttccaacc 4438 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 259 tgattgagaacgtcagagtcagaggcagaagcaacaaatgttattgcaagccctttggtt 318 ||||| ||||| |||||||| |||||||| | |||||||||||||||||| ||||||||| Sbjct: 33688 tgattaagaacatcagagtctgaggcagaggaaacaaatgttattgcaagtcctttggtt 33629 Query: 319 ccaaaacgcccagcccttccaacc 342 |||||||| ||||||||||||||| Sbjct: 33628 ccaaaacgtccagcccttccaacc 33605 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 196 tatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaaacctttcttgc 255 ||||| ||||| || ||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 33835 tatgtcgaagtatcaatctgctcaggaagctcctttatgtcaacctcgaatctttcttgc 33776 Query: 256 acct 259 |||| Sbjct: 33775 acct 33772 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 196 tatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaaacctttcttgc 255 ||||| ||||| || ||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 4671 tatgtcgaagtatcaatctgctcaggaagctcctttatgtcaacctcgaatctttcttgc 4612 Query: 256 acct 259 |||| Sbjct: 4611 acct 4608
>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1156H12 Length = 159509 Score = 256 bits (129), Expect = 8e-65 Identities = 174/189 (92%) Strand = Plus / Minus Query: 486 cctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattcacagag 545 ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| || Sbjct: 64622 cctctcctcctgtgtcattccagaatgtatggagatcgcaggaaagttgcattcacaaag 64563 Query: 546 cagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatttggttgaa 605 |||| |||| ||||||| ||| |||| ||||||||||||||||||||||| ||| ||||| Sbjct: 64562 cagcttgttcagttctgcagctctactaacacttttaacaaatatcacaacttgattgaa 64503 Query: 606 gtcgagcgcatctaagagatcattcaattttcgattcttctccgcctcacttagtttaat 665 ||| || ||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 64502 gtccagtgcatctaagagatcattcaatttccggttcttctccgcctcacttagtttaat 64443 Query: 666 atagtgctg 674 ||||||||| Sbjct: 64442 atagtgctg 64434 Score = 248 bits (125), Expect = 2e-62 Identities = 173/189 (91%) Strand = Plus / Minus Query: 486 cctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattcacagag 545 ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| || Sbjct: 94462 cctctcctcctgtgtcattccagaatgtatggagatcgcaggaaagttgcattcacaaag 94403 Query: 546 cagcctgttaagttctgaagccctaccaacacttttaacaaatatcacaatttggttgaa 605 |||| |||| ||||||| ||| |||| ||||||||||||||||||||||| ||| ||||| Sbjct: 94402 cagcttgttcagttctgcagctctactaacacttttaacaaatatcacaacttgattgaa 94343 Query: 606 gtcgagcgcatctaagagatcattcaattttcgattcttctccgcctcacttagtttaat 665 ||| || ||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 94342 gtcaagtgcatctaagagatcattcaatttccggttcttctccgcctcacttagttttat 94283 Query: 666 atagtgctg 674 ||||||||| Sbjct: 94282 atagtgctg 94274 Score = 200 bits (101), Expect = 4e-48 Identities = 137/149 (91%) Strand = Plus / Minus Query: 340 accctgtgcaagtatgtatcagcagaatcgggcatgtcatagtttatgacaatattgaca 399 ||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95384 accctgtgcaaatacgagtcagcagaatcgggcatgtcatagtttatgacaatgttgaca 95325 Query: 400 cgctcaatatcaatccccctgccaactaaatccgtagccacaaggatcctcttgtgcccc 459 || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 95324 cgttcaatatcaattcccctgccaactaaatcagtagccacaagaatcctcttgtgtcct 95265 Query: 460 tccttgaagttcttataccgggtcagcct 488 |||||||||||||| |||||||||||||| Sbjct: 95264 tccttgaagttcttgtaccgggtcagcct 95236 Score = 190 bits (96), Expect = 4e-45 Identities = 123/132 (93%) Strand = Plus / Minus Query: 357 atcagcagaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccc 416 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 66203 atcagcagaatcgggcatgtcatagtttatgacaatgttgacacgttcaatatcaattcc 66144 Query: 417 cctgccaactaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttata 476 ||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 66143 cctgccaactaaatcagtagccacaagaatcctcttgtgtccttccttgaagttcttgta 66084 Query: 477 ccgggtcagcct 488 |||||| ||||| Sbjct: 66083 ccgggtaagcct 66072 Score = 127 bits (64), Expect = 5e-26 Identities = 79/84 (94%) Strand = Plus / Minus Query: 259 tgattgagaacgtcagagtcagaggcagaagcaacaaatgttattgcaagccctttggtt 318 ||||| ||||| ||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 66367 tgattaagaacatcagagtcagaggcagaggaaacaaatgttattgcaagtcctttggtt 66308 Query: 319 ccaaaacgcccagcccttccaacc 342 |||||||||||||||||||||||| Sbjct: 66307 ccaaaacgcccagcccttccaacc 66284 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 259 tgattgagaacgtcagagtcagaggcagaagcaacaaatgttattgcaagccctttggtt 318 ||||| ||||| |||||||| |||||||| | |||||||||||||||||| ||||||||| Sbjct: 95534 tgattaagaacatcagagtctgaggcagaggaaacaaatgttattgcaagtcctttggtt 95475 Query: 319 ccaaaacgcccagcccttccaacc 342 |||||||| ||||||||||||||| Sbjct: 95474 ccaaaacgtccagcccttccaacc 95451 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 196 tatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaaacctttcttgc 255 ||||| ||||| || ||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 95681 tatgtcgaagtatcaatctgctcaggaagctcctttatgtcaacctcgaatctttcttgc 95622 Query: 256 acct 259 |||| Sbjct: 95621 acct 95618 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 196 tatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaaacctttcttgc 255 ||||| ||||| || ||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 66517 tatgtcgaagtatcaatctgctcaggaagctcctttatgtcaacctcgaatctttcttgc 66458 Query: 256 acct 259 |||| Sbjct: 66457 acct 66454
>ref|NM_180476.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G11170 transcript variant AT5G11170.2 mRNA, complete cds Length = 1438 Score = 220 bits (111), Expect = 5e-54 Identities = 294/355 (82%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| |||||||| |||||||| || |||||||| || || ||||| || |||||||||| Sbjct: 1122 aagaaggcatgtaggttgaagtatcaatctgctccggaagttcctttatatcaacctcaa 1063 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 |||| ||||| ||||| || ||||| || || || || ||||| ||||||||||| |||| Sbjct: 1062 acctctcttgtacctggttaagaacctctgaatctgaagcagatgcaacaaatgtgattg 1003 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| || ||||||||||| | ||||| || ||||||||||| | || |||||||||| Sbjct: 1002 caagacccttggttccaaatctaccagctctgccaaccctgtgaagataggtatcagcag 943 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||| |||||||||||||| |||||||| |||||||||||||| |||||||| || || | Sbjct: 942 aatctggcatgtcatagttgatgacaatgttgacacgctcaatgtcaatccctcttccta 883 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtca 484 | || || || |||||||||||||| |||||||| |||||||| | || || || |||| Sbjct: 882 ccaagtcagtcgccacaaggatccttttgtgcccttccttgaaacttttgtatcgagtca 823 Query: 485 gcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattc 539 |||||| || || | ||||||||| || ||||| |||| || ||||||||||| Sbjct: 822 acctctcttcttgagacattccagagtggatgcatattgaggggaaattgcattc 768
>ref|NM_121155.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G11170 transcript variant AT5G11170.1 mRNA, complete cds Length = 1693 Score = 220 bits (111), Expect = 5e-54 Identities = 294/355 (82%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| |||||||| |||||||| || |||||||| || || ||||| || |||||||||| Sbjct: 1377 aagaaggcatgtaggttgaagtatcaatctgctccggaagttcctttatatcaacctcaa 1318 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 |||| ||||| ||||| || ||||| || || || || ||||| ||||||||||| |||| Sbjct: 1317 acctctcttgtacctggttaagaacctctgaatctgaagcagatgcaacaaatgtgattg 1258 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| || ||||||||||| | ||||| || ||||||||||| | || |||||||||| Sbjct: 1257 caagacccttggttccaaatctaccagctctgccaaccctgtgaagataggtatcagcag 1198 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||| |||||||||||||| |||||||| |||||||||||||| |||||||| || || | Sbjct: 1197 aatctggcatgtcatagttgatgacaatgttgacacgctcaatgtcaatccctcttccta 1138 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtca 484 | || || || |||||||||||||| |||||||| |||||||| | || || || |||| Sbjct: 1137 ccaagtcagtcgccacaaggatccttttgtgcccttccttgaaacttttgtatcgagtca 1078 Query: 485 gcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattc 539 |||||| || || | ||||||||| || ||||| |||| || ||||||||||| Sbjct: 1077 acctctcttcttgagacattccagagtggatgcatattgaggggaaattgcattc 1023
>gb|BT001052.1| Arabidopsis thaliana At5g11170/F2I11_60 mRNA, complete cds Length = 1284 Score = 220 bits (111), Expect = 5e-54 Identities = 294/355 (82%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| |||||||| |||||||| || |||||||| || || ||||| || |||||||||| Sbjct: 1282 aagaaggcatgtaggttgaagtatcaatctgctccggaagttcctttatatcaacctcaa 1223 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 |||| ||||| ||||| || ||||| || || || || ||||| ||||||||||| |||| Sbjct: 1222 acctctcttgtacctggttaagaacctctgaatctgaagcagatgcaacaaatgtgattg 1163 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| || ||||||||||| | ||||| || ||||||||||| | || |||||||||| Sbjct: 1162 caagacccttggttccaaatctaccagctctgccaaccctgtgaagataggtatcagcag 1103 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||| |||||||||||||| |||||||| |||||||||||||| |||||||| || || | Sbjct: 1102 aatctggcatgtcatagttgatgacaatgttgacacgctcaatgtcaatccctcttccta 1043 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtca 484 | || || || |||||||||||||| |||||||| |||||||| | || || || |||| Sbjct: 1042 ccaagtcagtcgccacaaggatccttttgtgcccttccttgaaacttttgtatcgagtca 983 Query: 485 gcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattc 539 |||||| || || | ||||||||| || ||||| |||| || ||||||||||| Sbjct: 982 acctctcttcttgagacattccagagtggatgcatattgaggggaaattgcattc 928
>dbj|AK221273.1| Arabidopsis thaliana mRNA for DEAD BOX RNA helicase RH15 - like protein, complete cds, clone: RAFL24-16-J22 Length = 1181 Score = 220 bits (111), Expect = 5e-54 Identities = 294/355 (82%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| |||||||| |||||||| || |||||||| || || ||||| || |||||||||| Sbjct: 912 aagaaggcatgtaggttgaagtatcaatctgctccggaagttcctttatatcaacctcaa 853 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 |||| ||||| ||||| || ||||| || || || || ||||| ||||||||||| |||| Sbjct: 852 acctctcttgtacctggttaagaacctctgaatctgaagcagatgcaacaaatgtgattg 793 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| || ||||||||||| | ||||| || ||||||||||| | || |||||||||| Sbjct: 792 caagacccttggttccaaatctaccagctctgccaaccctgtgaagataggtatcagcag 733 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||| |||||||||||||| |||||||| |||||||||||||| |||||||| || || | Sbjct: 732 aatctggcatgtcatagttgatgacaatgttgacacgctcaatgtcaatccctcttccta 673 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtca 484 | || || || |||||||||||||| |||||||| |||||||| | || || || |||| Sbjct: 672 ccaagtcagtcgccacaaggatccttttgtgcccttccttgaaacttttgtatcgagtca 613 Query: 485 gcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattc 539 |||||| || || | ||||||||| || ||||| |||| || ||||||||||| Sbjct: 612 acctctcttcttgagacattccagagtggatgcatattgaggggaaattgcattc 558
>gb|AY052303.1| Arabidopsis thaliana AT5g11170/F2I11_60 mRNA, complete cds Length = 1693 Score = 220 bits (111), Expect = 5e-54 Identities = 294/355 (82%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| |||||||| |||||||| || |||||||| || || ||||| || |||||||||| Sbjct: 1377 aagaaggcatgtaggttgaagtatcaatctgctccggaagttcctttatatcaacctcaa 1318 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 |||| ||||| ||||| || ||||| || || || || ||||| ||||||||||| |||| Sbjct: 1317 acctctcttgtacctggttaagaacctctgaatctgaagcagatgcaacaaatgtgattg 1258 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| || ||||||||||| | ||||| || ||||||||||| | || |||||||||| Sbjct: 1257 caagacccttggttccaaatctaccagctctgccaaccctgtgaagataggtatcagcag 1198 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||| |||||||||||||| |||||||| |||||||||||||| |||||||| || || | Sbjct: 1197 aatctggcatgtcatagttgatgacaatgttgacacgctcaatgtcaatccctcttccta 1138 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtca 484 | || || || |||||||||||||| |||||||| |||||||| | || || || |||| Sbjct: 1137 ccaagtcagtcgccacaaggatccttttgtgcccttccttgaaacttttgtatcgagtca 1078 Query: 485 gcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattc 539 |||||| || || | ||||||||| || ||||| |||| || ||||||||||| Sbjct: 1077 acctctcttcttgagacattccagagtggatgcatattgaggggaaattgcattc 1023
>emb|AJ010466.1|ATH010466 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH15 Length = 1635 Score = 212 bits (107), Expect = 1e-51 Identities = 239/283 (84%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| |||||||| |||||||| || |||||||| || || ||||| || |||||||||| Sbjct: 1356 aagaaggcatgtaggttgaagtatcaatctgctccggaagttcctttatatcaacctcaa 1297 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 |||| ||||| ||||| || ||||| || || || || ||||| ||||||||||| |||| Sbjct: 1296 acctctcttgtacctggttaagaacctctgaatctgaagcagatgcaacaaatgtgattg 1237 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| || ||||||||||| | ||||| || ||||||||||| | || |||||||||| Sbjct: 1236 caagacccttggttccaaatctaccagctctgccaaccctgtgaagataggtatcagcag 1177 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||| |||||||||||||| |||||||| |||||||||||||| |||||||| || || | Sbjct: 1176 aatctggcatgtcatagttgatgacaatgttgacacgctcaatgtcaatccctcttccta 1117 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaa 467 | || || || |||||||||||||| |||||||| |||||||| Sbjct: 1116 ccaagtcagtcgccacaaggatccttttgtgcccttccttgaa 1074
>ref|NM_121158.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G11200 mRNA, complete cds Length = 1659 Score = 188 bits (95), Expect = 2e-44 Identities = 290/355 (81%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| |||||||| || || || || ||||||||||| |||||||| || || ||||||| Sbjct: 1380 aagacggcatgtaagtcgatgtatcaatctgctcaggaagctcctttatatcgacctcaa 1321 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 |||| ||||| |||||||| || || || || || || ||||| ||||||||||| |||| Sbjct: 1320 acctctcttgaacctgattaaggacctctgaatctgaagcagatgcaacaaatgtgattg 1261 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| || ||||||||||| | ||||| || |||||||| || | || ||||| |||| Sbjct: 1260 caagacccttggttccaaatctaccagctctcccaaccctatgaagataggtatccgcag 1201 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||| |||||||||||||| || ||||| ||||||||||| || |||||||| || || | Sbjct: 1200 aatctggcatgtcatagttgataacaatgttgacacgctctatgtcaatccctcttccta 1141 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtca 484 | || || || ||||||||||||||||||||||| |||||||| | || || || |||| Sbjct: 1140 ccaagtcagtcgccacaaggatcctcttgtgcccttccttgaaacttttgtatcgagtca 1081 Query: 485 gcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattc 539 |||||| || || | ||| ||||| |||||||| |||| || ||||||||||| Sbjct: 1080 acctctcttcttgagacatgccagagtgtatgcatattgaggggaaattgcattc 1026
>gb|AY059168.1| Arabidopsis thaliana AT5g11200/F2I11_90 mRNA, complete cds Length = 1284 Score = 188 bits (95), Expect = 2e-44 Identities = 290/355 (81%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| |||||||| || || || || ||||||||||| |||||||| || || ||||||| Sbjct: 1282 aagacggcatgtaagtcgatgtatcaatctgctcaggaagctcctttatatcgacctcaa 1223 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 |||| ||||| |||||||| || || || || || || ||||| ||||||||||| |||| Sbjct: 1222 acctctcttgaacctgattaaggacctctgaatctgaagcagatgcaacaaatgtgattg 1163 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| || ||||||||||| | ||||| || |||||||| || | || ||||| |||| Sbjct: 1162 caagacccttggttccaaatctaccagctctcccaaccctatgaagataggtatccgcag 1103 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||| |||||||||||||| || ||||| ||||||||||| || |||||||| || || | Sbjct: 1102 aatctggcatgtcatagttgataacaatgttgacacgctctatgtcaatccctcttccta 1043 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtca 484 | || || || ||||||||||||||||||||||| |||||||| | || || || |||| Sbjct: 1042 ccaagtcagtcgccacaaggatcctcttgtgcccttccttgaaacttttgtatcgagtca 983 Query: 485 gcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattc 539 |||||| || || | ||| ||||| |||||||| |||| || ||||||||||| Sbjct: 982 acctctcttcttgagacatgccagagtgtatgcatattgaggggaaattgcattc 928
>gb|AF378868.1|AF378868 Arabidopsis thaliana AT5g11200/F2I11_90 mRNA, complete cds Length = 1654 Score = 188 bits (95), Expect = 2e-44 Identities = 290/355 (81%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| |||||||| || || || || ||||||||||| |||||||| || || ||||||| Sbjct: 1379 aagacggcatgtaagtcgatgtatcaatctgctcaggaagctcctttatatcgacctcaa 1320 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 |||| ||||| |||||||| || || || || || || ||||| ||||||||||| |||| Sbjct: 1319 acctctcttgaacctgattaaggacctctgaatctgaagcagatgcaacaaatgtgattg 1260 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| || ||||||||||| | ||||| || |||||||| || | || ||||| |||| Sbjct: 1259 caagacccttggttccaaatctaccagctctcccaaccctatgaagataggtatccgcag 1200 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||| |||||||||||||| || ||||| ||||||||||| || |||||||| || || | Sbjct: 1199 aatctggcatgtcatagttgataacaatgttgacacgctctatgtcaatccctcttccta 1140 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtca 484 | || || || ||||||||||||||||||||||| |||||||| | || || || |||| Sbjct: 1139 ccaagtcagtcgccacaaggatcctcttgtgcccttccttgaaacttttgtatcgagtca 1080 Query: 485 gcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattc 539 |||||| || || | ||| ||||| |||||||| |||| || ||||||||||| Sbjct: 1079 acctctcttcttgagacatgccagagtgtatgcatattgaggggaaattgcattc 1025
>emb|BX831239.1|CNS09YQC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZE11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1723 Score = 188 bits (95), Expect = 2e-44 Identities = 290/355 (81%) Strand = Plus / Minus Query: 185 aagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaa 244 |||| |||||||| || || || || ||||||||||| |||||||| || || ||||||| Sbjct: 1488 aagacggcatgtaagtcgatgtatcaatctgctcaggaagctcctttatatcgacctcaa 1429 Query: 245 acctttcttgcacctgattgagaacgtcagagtcagaggcagaagcaacaaatgttattg 304 |||| ||||| |||||||| || || || || || || ||||| ||||||||||| |||| Sbjct: 1428 acctctcttgaacctgattaaggacctctgaatctgaagcagatgcaacaaatgtgattg 1369 Query: 305 caagccctttggttccaaaacgcccagcccttccaaccctgtgcaagtatgtatcagcag 364 |||| || ||||||||||| | ||||| || |||||||| || | || ||||| |||| Sbjct: 1368 caagacccttggttccaaatctaccagctctcccaaccctatgaagataggtatccgcag 1309 Query: 365 aatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||| |||||||||||||| || ||||| ||||||||||| || |||||||| || || | Sbjct: 1308 aatctggcatgtcatagttgataacaatgttgacacgctctatgtcaatccctcttccta 1249 Query: 425 ctaaatccgtagccacaaggatcctcttgtgcccctccttgaagttcttataccgggtca 484 | || || || ||||||||||||||||||||||| |||||||| | || || || |||| Sbjct: 1248 ccaagtcagtcgccacaaggatcctcttgtgcccttccttgaaacttttgtatcgagtca 1189 Query: 485 gcctctcctcctgtgtcattccagaatgtatgcagattgcaggaaaattgcattc 539 |||||| || || | ||| ||||| |||||||| |||| || ||||||||||| Sbjct: 1188 acctctcttcttgagacatgccagagtgtatgcatattgaggggaaattgcattc 1134
>emb|BX830512.1|CNS0A08M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB88ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1555 Score = 133 bits (67), Expect = 8e-28 Identities = 208/255 (81%) Strand = Plus / Minus Query: 212 tctgctcaggcagctccttgatgtcaacctcaaacctttcttgcacctgattgagaacgt 271 |||||||||| |||||||| || || ||||||||| | ||||| |||||||| || || | Sbjct: 1314 tctgctcaggaagctcctttatatcgacctcaaacgtctcttgaacctgattaaggacct 1255 Query: 272 cagagtcagaggcagaagcaacaaatgttattgcaagccctttggttccaaaacgcccag 331 | ||||| || ||||| |||||| |||| ||||| || || || |||||||| | |||| Sbjct: 1254 ctgagtctgaagcagatgcaacagatgtgattgctagaccctttgttccaaatctaccag 1195 Query: 332 cccttccaaccctgtgcaagtatgtatcagcagaatcgggcatgtcatagtttatgacaa 391 | || |||||||| || | || ||||| ||||| || |||||||||||||| || | || Sbjct: 1194 ctctcccaaccctatgaagataggtatccgcagagtctggcatgtcatagttgataagaa 1135 Query: 392 tattgacacgctcaatatcaatccccctgccaactaaatccgtagccacaaggatcctct 451 | ||||||||||| || |||||||| || || || || || || |||||||||||||||| Sbjct: 1134 tgttgacacgctctatgtcaatccctcttcctaccaagtcagtcgccacaaggatcctct 1075 Query: 452 tgtgcccctccttga 466 ||||||| ||||||| Sbjct: 1074 tgtgcccttccttga 1060
>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA project) Length = 110992 Score = 121 bits (61), Expect = 3e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 355 gtatcagcagaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatc 414 |||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 18958 gtatcagcagaatctggcatgtcatagttgatgacaatgttgacacgctcaatgtcaatc 18899 Query: 415 cccctgccaactaaatccgtagccacaaggatcctcttgtgcccctccttgaa 467 || || || || || || || |||||||||||||| |||||||| |||||||| Sbjct: 18898 cctcttcctaccaagtcagtcgccacaaggatccttttgtgcccttccttgaa 18846 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 355 gtatcagcagaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatc 414 ||||| |||||||| |||||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 33002 gtatccgcagaatctggcatgtcatagttgataacaatgttgacacgctctatgtcaatc 32943 Query: 415 cccctgccaactaaatccgtagccacaaggatcctcttgtgcccctccttgaa 467 || || || || || || || ||||||||||||||||||||||| |||||||| Sbjct: 32942 cctcttcctaccaagtcagtcgccacaaggatcctcttgtgcccttccttgaa 32890 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 194 tgtatgttgaagtgtcgatctgctcaggcagctccttgatgtcaacctcaaacctttctt 253 |||| |||||||| || |||||||| || || ||||| || |||||||||||||| |||| Sbjct: 19303 tgtaggttgaagtatcaatctgctccggaagttcctttatatcaacctcaaacctctctt 19244 Query: 254 gcacctg 260 | ||||| Sbjct: 19243 gtacctg 19237 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 211 atctgctcaggcagctccttgatgtcaacctcaaacctttcttgcacctg 260 ||||||||||| |||||||| || || ||||||||||| ||||| ||||| Sbjct: 33327 atctgctcaggaagctcctttatatcgacctcaaacctctcttgaacctg 33278 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 283 gcagaagcaacaaatgttattgcaagccctttggttccaaa 323 ||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 33160 gcagatgcaacaaatgtgattgcaagacccttggttccaaa 33120 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 283 gcagaagcaacaaatgttattgcaagccctttggttccaaa 323 ||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 19120 gcagatgcaacaaatgtgattgcaagacccttggttccaaa 19080
>dbj|AK058505.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F12, full insert sequence Length = 564 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 589 atcacaatttggttgaagtcgagcgcatctaagagatcattcaattttcgattcttctcc 648 ||||||| ||| |||||||| || ||||||||||||||||||||||| || ||||||||| Sbjct: 564 atcacaacttgattgaagtcaagtgcatctaagagatcattcaatttccggttcttctcc 505 Query: 649 gcctcacttagtttaatatagtgctgaac 677 |||||||||||||| |||||||||||||| Sbjct: 504 gcctcacttagttttatatagtgctgaac 476
>gb|AC150787.15| Medicago truncatula clone mth2-171n13, complete sequence Length = 82665 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Minus Query: 340 accctgtgcaagtatgtatcagcagaatcgggcatgtcatagtttatgacaatattgaca 399 |||||||||||||| || || |||||||| ||||||||||||||||| |||||||||||| Sbjct: 19784 accctgtgcaagtaagtgtctgcagaatcaggcatgtcatagtttataacaatattgaca 19725 Query: 400 cgctcaatatcaatccccctgccaactaaatccgtagccacaaggatcctcttgtgcccc 459 || ||||| |||||||| || ||||| ||||| ||||| ||||| ||||| |||||| Sbjct: 19724 cgttcaatgtcaatccctctaccaaccaaatctgtagcaacaagaatcctagaatgcccc 19665 Query: 460 tccttgaa 467 |||||||| Sbjct: 19664 tccttgaa 19657 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 291 aacaaatgttattgcaagccctttggttccaaa 323 ||||||||| |||||||| |||||||||||||| Sbjct: 19936 aacaaatgtaattgcaaggcctttggttccaaa 19904 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 568 ctaccaacacttttaacaaatatcacaatttggttgaagtcgagcgcatctaagagatca 627 |||| ||||||||| ||||| || |||| |||||||||||| || ||||| | |||||| Sbjct: 18667 ctactaacacttttcacaaagataacaacttggttgaagtctagggcatcaagaagatca 18608 Query: 628 ttcaa 632 ||||| Sbjct: 18607 ttcaa 18603
>gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete sequence Length = 115348 Score = 113 bits (57), Expect = 8e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 340 accctgtgcaagtatgtatcagcagaatcgggcatgtcatagtttatgacaatattgaca 399 ||||||||||||||||| || ||||| || ||||||||||||||||| || ||||| ||| Sbjct: 27011 accctgtgcaagtatgtgtctgcagagtcaggcatgtcatagtttatcactatattaaca 27070 Query: 400 cgctcaatatcaatccccctgccaactaaatccgtagccacaaggatcctcttgtgcccc 459 || ||||| ||||| ||||||||||||||||| || || ||||| ||||| | |||||| Sbjct: 27071 cgttcaatgtcaattcccctgccaactaaatctgttgctacaagaatccttgtatgcccc 27130 Query: 460 tcctt 464 ||||| Sbjct: 27131 tcctt 27135 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 574 acacttttaacaaatatcacaatttggttgaagtcgagcgcatctaagagatcattcaat 633 |||||||| ||||| ||||||| |||||||||||| || ||||| | ||||| ||||| Sbjct: 30325 acacttttcacaaagatcacaacttggttgaagtccagtgcatcaagaagatcgttcaac 30384 Query: 634 tttcgattcttctccgcctc 653 ||||| ||||||||| |||| Sbjct: 30385 tttcggttcttctcctcctc 30404
>gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete sequence Length = 139792 Score = 113 bits (57), Expect = 8e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 340 accctgtgcaagtatgtatcagcagaatcgggcatgtcatagtttatgacaatattgaca 399 ||||||||||||||||| || ||||| || ||||||||||||||||| || ||||| ||| Sbjct: 58084 accctgtgcaagtatgtgtctgcagagtcaggcatgtcatagtttatcactatattaaca 58025 Query: 400 cgctcaatatcaatccccctgccaactaaatccgtagccacaaggatcctcttgtgcccc 459 || ||||| ||||| ||||||||||||||||| || || ||||| ||||| | |||||| Sbjct: 58024 cgttcaatgtcaattcccctgccaactaaatctgttgctacaagaatccttgtatgcccc 57965 Query: 460 tcctt 464 ||||| Sbjct: 57964 tcctt 57960 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 574 acacttttaacaaatatcacaatttggttgaagtcgagcgcatctaagagatcattcaat 633 |||||||| ||||| ||||||| |||||||||||| || ||||| | ||||| ||||| Sbjct: 54770 acacttttcacaaagatcacaacttggttgaagtccagtgcatcaagaagatcgttcaac 54711 Query: 634 tttcgattcttctccgcctc 653 ||||| ||||||||| |||| Sbjct: 54710 tttcggttcttctcctcctc 54691
>dbj|AK104852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B03, full insert sequence Length = 419 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 177 ggatcttcaagatggcatgtatgttgaagtgtcgatctgctcaggcagctccttgatgtc 236 ||||||| |||| ||||| ||||| ||||| || ||||||||||| |||||||| ||||| Sbjct: 86 ggatctttaagaaggcatatatgtcgaagtatcaatctgctcaggaagctcctttatgtc 27 Query: 237 aacctcaaacctttcttgcacctgat 262 |||||| || ||||||||||| |||| Sbjct: 26 aacctcgaatctttcttgcacttgat 1
>gb|BC042330.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 39a, mRNA (cDNA clone MGC:55881 IMAGE:3818646), complete cds Length = 1539 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccc 416 |||||||||||||| | ||||||||| |||||||||||||| ||||| Sbjct: 1085 ggcatgtcatagttgaagacaatattaacacgctcaatatccatccc 1039
>ref|NM_199721.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 39a (ddx39a), mRNA Length = 1539 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccc 416 |||||||||||||| | ||||||||| |||||||||||||| ||||| Sbjct: 1085 ggcatgtcatagttgaagacaatattaacacgctcaatatccatccc 1039
>emb|AL953855.9| Zebrafish DNA sequence from clone CH211-239F4 in linkage group 1, complete sequence Length = 146080 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccc 416 |||||||||||||| | ||||||||| |||||||||||||| ||||| Sbjct: 56861 ggcatgtcatagttgaagacaatattaacacgctcaatatccatccc 56815
>emb|Z99162.1|SPAC17G6 S.pombe chromosome I cosmid c17G6 Length = 43880 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 364 gaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaat 413 ||||| |||||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 30792 gaatcaggcatgtcatagttaattacaatgttgacgcgctcaatatcaat 30841
>ref|NM_001019684.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC17G6.14c), partial mRNA Length = 1305 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 364 gaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaat 413 ||||| |||||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 1124 gaatcaggcatgtcatagttaattacaatgttgacgcgctcaatatcaat 1075
>dbj|D89270.1| Schizosaccharomyces pombe mRNA, partial cds, clone: SY 1777 Length = 1491 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 364 gaatcgggcatgtcatagtttatgacaatattgacacgctcaatatcaat 413 ||||| |||||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 839 gaatcaggcatgtcatagttaattacaatgttgacgcgctcaatatcaat 790
>gb|AY223417.1| Schistosoma japonicum clone ZZZ368 mRNA sequence Length = 1423 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccc 418 |||||||||||||| | ||| ||||||||||||||||| || ||||||| Sbjct: 1128 ggcatgtcatagttgaagacgatattgacacgctcaatgtccatccccc 1080
>gb|DQ086193.1| Ictalurus punctatus DEAD box protein mRNA, partial cds Length = 754 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 367 tcgggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgcc 422 ||||||||||| ||||| | ||| || |||||||| |||||||| ||||||||||| Sbjct: 584 tcgggcatgtcgtagttgaagacgatgttgacacgttcaatatccatccccctgcc 529
>gb|BC071505.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 39a, mRNA (cDNA clone MGC:86865 IMAGE:6903439), complete cds Length = 1638 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccc 416 |||||||||||||| | |||||| || |||||||||||||| ||||| Sbjct: 1173 ggcatgtcatagttgaagacaatgtttacacgctcaatatccatccc 1127
>gb|AY810159.1| Schistosoma japonicum clone SJCHGC00405 unknown mRNA Length = 608 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccc 418 |||||||| ||||| | ||| ||||||||||||||||| || ||||||| Sbjct: 437 ggcatgtcgtagttgaagacgatattgacacgctcaatgtccatccccc 389
>ref|NM_197982.2| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 (Ddx39), mRNA Length = 1634 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1234 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1180
>gb|AC164432.3| Mus musculus BAC clone RP23-394G23 from chromosome 8, complete sequence Length = 220224 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 45764 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 45818
>dbj|AK137114.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430085I15 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 3852 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1162 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1108
>dbj|AK150997.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830019L16 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1517 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1185 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1131
>dbj|AK145927.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530016E16 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1602 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1199 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1145
>dbj|AK149475.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730023D16 product:similar to Nuclear RNA helicase, DECD variant of DEAD box family [Mus musculus], full insert sequence Length = 1924 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1598 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1544
>dbj|AK152394.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830067O14 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1498 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1166 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1112
>dbj|AK151395.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830028P17 product:Nuclear RNA helicase, DECD variant of DEAD box family homolog [Mus musculus], full insert sequence Length = 1552 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1225 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1171
>dbj|AK164289.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030070E09 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1453 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1126 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1072
>dbj|AK162752.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130024M12 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 2057 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1724 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1670
>dbj|AK016960.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933428C17 product:nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1497 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1165 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1111
>dbj|AK012002.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610307C23 product:nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1563 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1163 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1109
>dbj|AK011285.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610002F14 product:nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1422 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1095 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1041
>dbj|AK195258.1| Mus musculus cDNA, clone:Y1G0117O08, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000019576, based on BLAT search Length = 391 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 246 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 192
>gb|BC020134.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, mRNA (cDNA clone MGC:28113 IMAGE:3969048), complete cds Length = 1497 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 1144 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 1090
>gb|AC134525.5| Mus musculus BAC clone RP24-496F7 from 8, complete sequence Length = 215900 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 370 ggcatgtcatagtttatgacaatattgacacgctcaatatcaatccccctgccaa 424 |||||||||||||| | |||||| ||||| |||||||| || || || ||||||| Sbjct: 149852 ggcatgtcatagttgaagacaatgttgactcgctcaatgtccatacctctgccaa 149906
>gb|AC155811.2| Mus musculus BAC clone RP24-185C13 from chromosome 12, complete sequence Length = 152790 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 294 aaatgttattgcaagccctttg 315 |||||||||||||||||||||| Sbjct: 150925 aaatgttattgcaagccctttg 150904
>gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complete sequence Length = 217949 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 294 aaatgttattgcaagccctttg 315 |||||||||||||||||||||| Sbjct: 146003 aaatgttattgcaagccctttg 146024
>ref|XM_651877.1| Entamoeba histolytica HM-1:IMSS protein kinase (6.t00088) partial mRNA Length = 5265 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 taacaaatatcacaatttggt 601 ||||||||||||||||||||| Sbjct: 3530 taacaaatatcacaatttggt 3510
>emb|CR378677.1| Photobacterium profundum SS9 chromosome 2; segment 3/7 Length = 348759 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 389 caatattgacacgctcaatatcaatcccc 417 ||||||||||||| |||| |||||||||| Sbjct: 111590 caatattgacacgttcaacatcaatcccc 111618
>gb|AC024451.8| Homo sapiens chromosome 11, clone RP11-697N18, complete sequence Length = 159791 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 gggtcagcctctcctcctgtg 499 ||||||||||||||||||||| Sbjct: 47496 gggtcagcctctcctcctgtg 47516
>gb|AC131904.4| Homo sapiens chromosome 8, clone CTD-2328O16, complete sequence Length = 116803 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 gggtcagcctctcctcctgtg 499 ||||||||||||||||||||| Sbjct: 31312 gggtcagcctctcctcctgtg 31292
>gb|AY449461.1| Oikopleura dioica clone BACOIKO005 4xj24, complete sequence Length = 95978 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 tcaaacctttcttgcacctgattgagaac 269 ||||||||| ||||||| ||||||||||| Sbjct: 85273 tcaaaccttccttgcacttgattgagaac 85301
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 cagaagcaacaaatgttatt 303 |||||||||||||||||||| Sbjct: 65158 cagaagcaacaaatgttatt 65177
>gb|AC127342.3| Mus musculus BAC clone RP23-191B18 from chromosome 18, complete sequence Length = 185210 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ccaatagaaatgtcaaggtg 141 |||||||||||||||||||| Sbjct: 125029 ccaatagaaatgtcaaggtg 125010
>gb|AC125355.4| Mus musculus BAC clone RP23-183C14 from 12, complete sequence Length = 180423 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 aggcagaagcaacaaatgtt 300 |||||||||||||||||||| Sbjct: 73500 aggcagaagcaacaaatgtt 73481
>gb|AC111091.8| Mus musculus chromosome 3, clone RP23-165D1, complete sequence Length = 188735 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 cttgaagttcttataccggg 481 |||||||||||||||||||| Sbjct: 79152 cttgaagttcttataccggg 79171
>gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete sequence Length = 129053 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 acacttttaacaaatatcacaatt 597 |||| ||||||||||||||||||| Sbjct: 117667 acacatttaacaaatatcacaatt 117644
>gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete sequence Length = 117666 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 574 acacttttaacaaatatcacaatt 597 |||| ||||||||||||||||||| Sbjct: 33992 acacatttaacaaatatcacaatt 34015
>gb|AC135414.31| Medicago truncatula clone mth2-8n20, complete sequence Length = 127018 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcagaagcaacaaatgttat 302 |||||||||||||||||||| Sbjct: 76277 gcagaagcaacaaatgttat 76258
>gb|AC147009.5| Medicago truncatula clone mth2-139j3, complete sequence Length = 125303 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gcagaagcaacaaatgttat 302 |||||||||||||||||||| Sbjct: 50741 gcagaagcaacaaatgttat 50760
>gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-446A15, complete sequence Length = 178963 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aatagaaatgtcaaggtgtt 143 |||||||||||||||||||| Sbjct: 77367 aatagaaatgtcaaggtgtt 77348
>emb|AL136122.6| Human DNA sequence from clone RP3-413L20 on chromosome 6, complete sequence Length = 54475 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 aacacttttaacaaatatca 592 |||||||||||||||||||| Sbjct: 27713 aacacttttaacaaatatca 27694
>gb|AC160340.2| Mus musculus BAC clone RP23-436E24 from chromosome 12, complete sequence Length = 209911 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 agccacaaggatcctcttgt 454 |||||||||||||||||||| Sbjct: 18173 agccacaaggatcctcttgt 18154
>gb|AC154233.3| Mus musculus BAC clone RP24-345G9 from chromosome 16, complete sequence Length = 178248 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 cttgtgcccctccttgaagt 469 |||||||||||||||||||| Sbjct: 110823 cttgtgcccctccttgaagt 110804
>gb|AC107025.3| Homo sapiens 3 BAC RP11-474M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178033 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gcattcacagagcagcctgt 553 |||||||||||||||||||| Sbjct: 29612 gcattcacagagcagcctgt 29631
>gb|AC159633.2| Mus musculus BAC clone RP24-159L15 from chromosome 12, complete sequence Length = 188757 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 agccacaaggatcctcttgt 454 |||||||||||||||||||| Sbjct: 156896 agccacaaggatcctcttgt 156877
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 cgggcatgtcatagtttatgacaa 391 |||||||||||||||| ||||||| Sbjct: 23067 cgggcatgtcatagttgatgacaa 23090
>gb|AC010590.7|AC010590 Homo sapiens chromosome 5 clone CTC-441F14, complete sequence Length = 92602 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 accaacacttttaacaaata 589 |||||||||||||||||||| Sbjct: 74720 accaacacttttaacaaata 74739
>gb|AC011361.4|AC011361 Homo sapiens chromosome 5 clone CTC-482N19, complete sequence Length = 189893 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 accaacacttttaacaaata 589 |||||||||||||||||||| Sbjct: 20223 accaacacttttaacaaata 20242
>ref|NM_210683.1| Eremothecium gossypii AFL221Cp (AFL221C), mRNA Length = 1674 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 cgggcatgtcatagtttatgacaa 391 |||||||||||||||| ||||||| Sbjct: 1318 cgggcatgtcatagttgatgacaa 1295
>emb|AL137128.4|CNS01DWD Human chromosome 14 DNA sequence BAC R-951P22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 228652 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 tcctgtgtcattccagaatg 512 |||||||||||||||||||| Sbjct: 49675 tcctgtgtcattccagaatg 49656
>gb|AC136640.2| Mus musculus BAC clone RP23-2E24 from 12, complete sequence Length = 199358 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aggcagaagcaacaaatgtt 300 |||||||||||||||||||| Sbjct: 53743 aggcagaagcaacaaatgtt 53762
>emb|AL808105.15| Mouse DNA sequence from clone RP23-22G24 on chromosome 4, complete sequence Length = 252003 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 attgcaggaaaattgcattc 539 |||||||||||||||||||| Sbjct: 96133 attgcaggaaaattgcattc 96114
>emb|AL627123.13| Mouse DNA sequence from clone RP23-351I23 on chromosome 4, complete sequence Length = 185022 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 tcctcttgtgcccctccttg 465 |||||||||||||||||||| Sbjct: 167043 tcctcttgtgcccctccttg 167024 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,249,432 Number of Sequences: 3902068 Number of extensions: 6249432 Number of successful extensions: 132566 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 132341 Number of HSP's gapped (non-prelim): 221 length of query: 680 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 657 effective length of database: 17,143,297,704 effective search space: 11263146591528 effective search space used: 11263146591528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
