>SSB_PSEPK (Q88QK5) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 181

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 268 KGRKSSGYIYDHGGKNGGXVADQQXKLQPARLQWQRPKE 152
           +G++  G  Y+ GG N G    QQ    P R Q QRP++
Sbjct: 116 QGQQQGGDPYNQGGGNYGGGQQQQYNQAPPRQQAQRPQQ 154

>GLGB_CORDI (Q6NHR6) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 732

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 7/37 (18%)
 Frame = +1

Query: 208 QPYHRFYHHDHI-------YSLSFCGPFGXINXSHGK 297
           +P HR YHH+ I       YS  F  PF      HGK
Sbjct: 500 EPIHRMYHHNDITFSMVYAYSEKFVLPFSHDEVVHGK 536

>ILF3_BRARE (Q6NXA4) Interleukin enhancer-binding factor 3 homolog|
          Length = 833

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 265 GRKSSGY-IYDHGGKNGGXVADQQ 197
           G  +SGY  Y++GG NGG VA  Q
Sbjct: 659 GGNNSGYNFYNNGGSNGGSVASNQ 682


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,401,544
Number of Sequences: 219361
Number of extensions: 417230
Number of successful extensions: 757
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)