ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10a21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y5224_ARATH (Q94EG6) Protein At5g02240 40 0.008
2Y2766_ARATH (O80934) Protein At2g37660, chloroplast precursor 38 0.025

>Y5224_ARATH (Q94EG6) Protein At5g02240|
          Length = 253

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
 Frame = -1

Query: 674 IRESGVPYSIVRPCALTEEPAGA-DLIFEQGDNI----TGKISREEVARICVAALASPSA 510
           + +SG PY+I+R   L ++  G  +L+  + D +    T  + R +VA +C+ AL    A
Sbjct: 162 LADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEA 221

Query: 509 VGKTFEVKSTVPFSEPFVIDPSNPPPEKDYEVYFKEL 399
             K F++ S                P KD++  F ++
Sbjct: 222 KNKAFDLGSK---------PEGTSTPTKDFKALFSQV 249



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>Y2766_ARATH (O80934) Protein At2g37660, chloroplast precursor|
          Length = 325

 Score = 38.1 bits (87), Expect = 0.025
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
 Frame = -1

Query: 674 IRESGVPYSIVRPCALTEEPAG-ADLIFEQGDNI----TGKISREEVARICVAALASPSA 510
           + +SG+PY+I+R   L ++  G  +L+  + D +    T  I+R +VA +CV AL    A
Sbjct: 234 LADSGIPYTIIRAGGLQDKDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQLEEA 293

Query: 509 VGKTFEVKSTVPFSEPFVIDPSNPPPEKDYEVYFKEL 399
             K  ++ S                P KD++  F ++
Sbjct: 294 KFKALDLASK---------PEGTGTPTKDFKALFTQV 321


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,412,807
Number of Sequences: 219361
Number of extensions: 1891702
Number of successful extensions: 4502
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4502
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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