| Clone Name | rbaal10a10 |
|---|---|
| Clone Library Name | barley_pub |
>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)| Length = 230 Score = 85.1 bits (209), Expect = 7e-17 Identities = 41/84 (48%), Positives = 54/84 (64%) Frame = -2 Query: 447 NLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRD 268 NL L AGI P D ++Y L SIRD+I+E GFT +ECNR G +QL+QVY C+DR Sbjct: 148 NLLGALTKAGINP-DGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRS 206 Query: 267 GENLIDCPLPMQGNCKDRVQLPAF 196 G LI+CP+ G C ++ P+F Sbjct: 207 GSGLIECPVFPHGKCGAEIEFPSF 230
>RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC 3.1.27.1)| (RNase LX) Length = 237 Score = 73.6 bits (179), Expect = 2e-13 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 1/90 (1%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCID 274 + NL L +AGI P + + Y + SI+ AI +G G T +ECN G QL+QVY C+D Sbjct: 142 KSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDSQGNHQLYQVYLCVD 201 Query: 273 RDGENLIDCPL-PMQGNCKDRVQLPAF*LN 187 IDCP+ P G C +++ P+F N Sbjct: 202 SSASKFIDCPIFPHGGKCGSKIEFPSFSTN 231
>RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC 3.1.27.1)| (RNase LE) Length = 230 Score = 72.0 bits (175), Expect = 6e-13 Identities = 36/84 (42%), Positives = 52/84 (61%) Frame = -2 Query: 447 NLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRD 268 +L SIL A I P D E+Y L +IR+AI+ G+T ++CN G +QL+QVY C+D Sbjct: 148 DLLSILQGADIHP-DGESYDLVNIRNAIKSAIGYTPWIQCNVDQSGNSQLYQVYICVDGS 206 Query: 267 GENLIDCPLPMQGNCKDRVQLPAF 196 G +LI+CP+ G C ++ P F Sbjct: 207 GSSLIECPIFPGGKCGTSIEFPTF 230
>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)| Length = 222 Score = 70.5 bits (171), Expect = 2e-12 Identities = 32/84 (38%), Positives = 46/84 (54%) Frame = -2 Query: 447 NLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRD 268 NL L +AGI P D + Y + I + I++ GF +ECN+ +QL+Q+Y C+D Sbjct: 140 NLLHALTNAGIKPDD-KFYEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYLCVDTS 198 Query: 267 GENLIDCPLPMQGNCKDRVQLPAF 196 I+CP+ G C RVQ P F Sbjct: 199 ASKFINCPVMPHGRCDSRVQFPKF 222
>RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RNase DdI)| Length = 223 Score = 47.4 bits (111), Expect = 2e-05 Identities = 27/83 (32%), Positives = 42/83 (50%) Frame = -2 Query: 447 NLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRD 268 N+T+ L I PSD+ TY I +AI G ++C+ G QL V CID++ Sbjct: 144 NITAALESENIYPSDSNTYKPVDITNAITTHFGGKPGIQCSSG-----QLSTVAVCIDKN 198 Query: 267 GENLIDCPLPMQGNCKDRVQLPA 199 +++DCP +C V+ P+ Sbjct: 199 SLSIMDCPDLQGWSCSGSVKFPS 221
>RNS1_PYRPY (O80322) Ribonuclease S-1 precursor (EC 3.1.27.1) (S1-RNase)| Length = 228 Score = 45.4 bits (106), Expect = 7e-05 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 5/87 (5%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTA-NLECNRGVDGETQLFQVYQCI 277 + N+++IL+ A I P+ T L I +AIR GT T +C + T+L +V C Sbjct: 142 KQNVSAILSKAAIQPNGTNRP-LVDIENAIRRGTNNTKPKFKCQKNTRTTTELVEVTLCS 200 Query: 276 DRDGENLIDCPL-PMQG---NCKDRVQ 208 DRD + I+CP P QG +C VQ Sbjct: 201 DRDLKKFINCPHGPPQGSRFSCPSSVQ 227
>RNS5_PYRPY (P93460) Ribonuclease S-5 precursor (EC 3.1.27.1) (S5-RNase)| Length = 227 Score = 40.4 bits (93), Expect = 0.002 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGT-GFTANLECNRGVDGETQLFQVYQCI 277 + N++ IL+ A I P D + L I +AIR G L+C + T+L ++ C Sbjct: 141 KQNVSRILSKAKIEP-DGKKRALLDIENAIRNGADNKKPKLKCQKK-GTTTELVEITLCS 198 Query: 276 DRDGENLIDCPLPMQ 232 D+ GE+ IDCP P + Sbjct: 199 DKSGEHFIDCPHPFE 213
>RNS3_PYRPY (O80323) Ribonuclease S-3 precursor (EC 3.1.27.1) (S3-RNase)| Length = 222 Score = 40.4 bits (93), Expect = 0.002 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGT-GFTANLECNRGVDGETQLFQVYQCI 277 + N++ IL+ A I P D + L I +AIR G L+C + T+L ++ C Sbjct: 136 KQNVSRILSKAKIEP-DGKKRALLDIENAIRNGADNKKPKLKCQKK-GTTTELVEITLCS 193 Query: 276 DRDGENLIDCPLPMQ 232 D+ GE+ IDCP P + Sbjct: 194 DKSGEHFIDCPHPFE 208
>RNS7_NICAL (Q40381) Ribonuclease S-7 precursor (EC 3.1.27.1) (Stylar| glycoprotein 7) (S7-RNase) Length = 218 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCID 274 + +L S L + GI+P Y + I I++ T NL C +G+ +L ++ C D Sbjct: 136 KFDLLSSLRNHGIIPGRGMKYTVQKINSTIKKITQGYPNLSCTKGI---MELVEIGICFD 192 Query: 273 RDGENLIDCPLP 238 +N+I+CP P Sbjct: 193 SMVKNVINCPHP 204
>RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 235 Score = 39.3 bits (90), Expect = 0.005 Identities = 27/79 (34%), Positives = 39/79 (49%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCID 274 R+N+ +L+ + P D + +S + AI + TG A L+C G L +V C D Sbjct: 149 RNNVLDMLSRKSLTPGD-QRVDVSDVNGAITKVTGGIAILKCPEGY-----LTEVIICFD 202 Query: 273 RDGENLIDCPLPMQGNCKD 217 G +IDCP P CKD Sbjct: 203 PSGFPVIDCPGPFP--CKD 219
>RNS2_PYRPY (Q40965) Ribonuclease S-2 precursor (EC 3.1.27.1) (S2-RNase)| Length = 221 Score = 38.5 bits (88), Expect = 0.008 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTG-FTANLECNRGVDGETQLFQVYQCI 277 + N++ IL+ A I P L I++AIR GT L+C + V+G T+L +V C Sbjct: 135 KQNVSRILSMATIEPEGKNRTLLE-IQNAIRAGTNNMIPKLKCQK-VNGMTELVEVTLCH 192 Query: 276 DRDGENLIDCPLPM 235 D + I+CP P+ Sbjct: 193 DSNLTQFINCPRPL 206
>RNOY_CRAGI (Q7M456) Ribonuclease Oy (EC 3.1.27.-) (RNase Oy)| Length = 213 Score = 37.7 bits (86), Expect = 0.014 Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLEC--NRGVDGETQLFQVYQC 280 ++N++ IL + GI+PS T Y ++ A++ G A +EC ++ + L+++ C Sbjct: 119 KYNISRILVNQGILPSKTAGYMINETEAAVKRELGVDAVIECVYDKEKTKKQLLYEISIC 178 Query: 279 IDRDGENLIDC 247 + ++ E LI C Sbjct: 179 LTKEFE-LISC 188
>RNS4_PYRPY (Q40966) Ribonuclease S-4 precursor (EC 3.1.27.1) (S4-RNase)| Length = 228 Score = 37.0 bits (84), Expect = 0.023 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTA-NLECNRGVDGETQLFQVYQCI 277 + N+++IL+ A I P+ L I +AIR G T +C + T+L +V C Sbjct: 142 KQNVSAILSKATIQPNGNNRS-LVDIENAIRSGNNNTKPKFKCQKNTRTTTELVEVTLCS 200 Query: 276 DRDGENLIDCP 244 +RD I+CP Sbjct: 201 NRDLTKFINCP 211
>RNY1_EMENI (Q5B3K6) Ribonuclease T2-like precursor (EC 3.1.27.1) (RNase| T2-like) Length = 417 Score = 35.8 bits (81), Expect = 0.052 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = -2 Query: 432 LADAGIVPSDTETYFLSSIRDAIREGTGFTANLEC 328 LA+AGIVPS T+TY + DA+ + G T + C Sbjct: 195 LANAGIVPSYTQTYTRHEVEDALSKAHGATVTVRC 229
>RNS2_SOLTU (Q01796) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 223 Score = 35.4 bits (80), Expect = 0.067 Identities = 18/69 (26%), Positives = 34/69 (49%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCID 274 + +L + L GI P T+ I+DAI+ T +L+C + G +L+++ C Sbjct: 139 KFDLLTTLRTHGITPGTKHTF--KKIQDAIKTVTQEVPDLKCVENIQGVLELYEIGICFT 196 Query: 273 RDGENLIDC 247 + ++L C Sbjct: 197 PEADSLFPC 205
>RNY1B_CANAL (Q5AKB1) Ribonuclease T2-like 1-B precursor (EC 3.1.27.1) (RNase| T2-like B) Length = 413 Score = 35.4 bits (80), Expect = 0.067 Identities = 15/36 (41%), Positives = 26/36 (72%) Frame = -2 Query: 432 LADAGIVPSDTETYFLSSIRDAIREGTGFTANLECN 325 LA+AGIVP++++TY LS I+ A+ + G ++C+ Sbjct: 193 LAEAGIVPTNSKTYSLSEIQSALNDKFGANVFIKCD 228
>RNY1_ASPFU (Q4WXZ5) Ribonuclease T2-like precursor (EC 3.1.27.1) (RNase| T2-like) Length = 414 Score = 34.3 bits (77), Expect = 0.15 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = -2 Query: 432 LADAGIVPSDTETYFLSSIRDAIREGTGFTANLEC-NRGVD 313 LA+AGIVPS TETY L I+ A+ + + C NR ++ Sbjct: 188 LANAGIVPSHTETYTLDEIQAALAKAHAAPVTIRCRNRALN 228
>RNS2_NICAL (P04007) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 214 Score = 33.9 bits (76), Expect = 0.20 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCID 274 + +L S L + GI S +Y + ++ + I+ TG NL C+R +L ++ C D Sbjct: 136 KFDLLSSLRNHGI--SRGFSYTVQNLNNTIKAITGGFPNLTCSR----LRELKEIGICFD 189 Query: 273 RDGENLIDCPLP 238 +N+IDCP P Sbjct: 190 ETVKNVIDCPNP 201
>RNS6_NICAL (Q40379) Ribonuclease S-6 precursor (EC 3.1.27.1) (Stylar| glycoprotein 6) (S6-RNase) Length = 215 Score = 33.5 bits (75), Expect = 0.26 Identities = 22/72 (30%), Positives = 35/72 (48%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCID 274 + +L + L + GI+ Y + I + I+ T NL C +G +L+ V C D Sbjct: 136 KFDLLTSLKNHGIIRG--YKYTVQKINNTIKTVTKGYPNLSCTKG----QELWFVGICFD 189 Query: 273 RDGENLIDCPLP 238 +N+IDCP P Sbjct: 190 STAKNVIDCPNP 201
>VGLI_BHV1S (Q08102) Glycoprotein I| Length = 380 Score = 32.3 bits (72), Expect = 0.57 Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 3/101 (2%) Frame = +2 Query: 92 SSRAPCRWPAASSQSAATPRRAAAMDVQLELKFNQKAGSWTLSLQLPCIGSGQSMRFSPS 271 S +AP PA + A PRR +D E++ +AGS +L P G S SPS Sbjct: 210 SPQAPPPRPAPPRAARAGPRRPERVDETTEVEAATRAGS-AFALTTPPAGPTASPAASPS 268 Query: 272 RSMHWYTWNSCVSPS--TP-RLHSRFAVNPVPSLMASLMLL 385 R+ + P+ TP R + A VP + L+LL Sbjct: 269 RAFSAAAPAAAAQPAGDTPARFRRQLASILVPLCVLVLLLL 309
>RNTR_TRIVI (P24657) Ribonuclease Trv (EC 3.1.27.1) (RNase Trv)| Length = 234 Score = 32.3 bits (72), Expect = 0.57 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%) Frame = -2 Query: 432 LADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCID-----RD 268 LADAGI P +++Y L I+ A+ + G L C DG+T L +V+ + +D Sbjct: 155 LADAGITPDGSKSYALDDIQSALSQQHGAEVTLGC----DGKT-LNEVWYHFNVKGSLQD 209 Query: 267 GENLIDCPLPMQGNCKDRV 211 G+ + P + C D V Sbjct: 210 GQFVAAEPDGAKSTCPDDV 228
>RNM_ASPSA (P19791) Ribonuclease M (EC 3.1.27.1) (RNase M)| Length = 238 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -2 Query: 432 LADAGIVPSDTETYFLSSIRDAI 364 L+DAGI PS+ TY LS I DA+ Sbjct: 156 LSDAGITPSEDATYKLSDIEDAL 178
>RN28_PANGI (P83618) Ribonuclease-like storage protein precursor (Root 28 kDa| major protein) Length = 238 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/68 (20%), Positives = 33/68 (48%) Frame = -2 Query: 447 NLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRD 268 ++ +L GI P++ + Y I++AI++ ++ + + E L + C+++ Sbjct: 142 DIVGLLNQEGIYPNN-DLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTDINVCVNQQ 200 Query: 267 GENLIDCP 244 +DCP Sbjct: 201 ATRFVDCP 208
>IF2_TROWT (Q83GT8) Translation initiation factor IF-2| Length = 803 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = -1 Query: 301 AVPGVPVHRPRRGEPHRLPAADAGQLQRQGPAAGLLIKFE 182 AV GVP PR G P GQL GPA +KF+ Sbjct: 98 AVRGVPSGAPRPGNNPYAPRQGMGQLATPGPATKRPVKFK 137
>IF2_TROW8 (Q83HG7) Translation initiation factor IF-2| Length = 803 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = -1 Query: 301 AVPGVPVHRPRRGEPHRLPAADAGQLQRQGPAAGLLIKFE 182 AV GVP PR G P GQL GPA +KF+ Sbjct: 98 AVRGVPSGAPRPGNNPYAPRQGMGQLATPGPATKRPVKFK 137
>RNS4_ANTHI (Q38717) Ribonuclease S-4 precursor (EC 3.1.27.1) (Stylar| glycoprotein 4) (S4-RNase) Length = 233 Score = 30.0 bits (66), Expect = 2.8 Identities = 16/70 (22%), Positives = 34/70 (48%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCID 274 R ++ +IL + P + + + + + I G T L+C ++ L +V C+D Sbjct: 148 RLDVLTILENNNFNPGTPQPFSVLRVFNTISRAIGKTPILKC-----AQSYLKEVVICVD 202 Query: 273 RDGENLIDCP 244 +G +++ CP Sbjct: 203 NNGASVVHCP 212
>RNS6_PYRPY (O80324) Ribonuclease S-6 precursor (EC 3.1.27.1) (S6-RNase)| Length = 229 Score = 30.0 bits (66), Expect = 2.8 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGT-GFTANLECNRGVDGETQLFQVYQCI 277 + N++ IL+ A I P + + I +AIR GT L+C + + T+L ++ C Sbjct: 143 KQNVSEILSRAKIEP-EGKIRRRDDIINAIRLGTKDKKPKLKCQKN-NQTTELVEITICS 200 Query: 276 DRDGENLIDCP 244 DR+ IDCP Sbjct: 201 DRNLTQFIDCP 211
>RNY1_DEBHA (Q6BHB1) Ribonuclease T2-like precursor (EC 3.1.27.1) (RNase| T2-like) Length = 403 Score = 29.6 bits (65), Expect = 3.7 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -2 Query: 432 LADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNR 322 LA GIVPS T+ Y I DA+ + G +CN+ Sbjct: 190 LAAEGIVPSLTQKYSKKQINDALTKYFGKAVYFKCNK 226
>CH60_BURMA (Q62I82) 60 kDa chaperonin (Protein Cpn60) (groEL protein)| Length = 550 Score = 29.6 bits (65), Expect = 3.7 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +1 Query: 256 EVLPVAVDALVHLEQLRLAVDATVALQVRREPGPLPDGVPDAAEEVGLGVG 408 +V A+ + L L DA VA ++ +E P+P G+P +G+G+G Sbjct: 498 KVTRTALQNAASVAGLLLTTDAAVA-ELPKEDAPMPGGMPGGMGGMGMGMG 547
>PCX3_MOUSE (Q8VI59) Pecanex-like protein 3| Length = 1620 Score = 29.3 bits (64), Expect = 4.8 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = +2 Query: 116 PAASSQSAATPRRAAAMDVQLELKFNQKAGSWTLSLQLPCIGSGQSMRFSPS 271 PA+ S TP+ A +D+ L + +A + LPC+ S +PS Sbjct: 1543 PASGSPKGGTPKSQAPLDLSLSPDVSSEASPARTTQDLPCLDSSIPEGCTPS 1594
>NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) (EB11) Length = 1336 Score = 28.9 bits (63), Expect = 6.3 Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 6/52 (11%) Frame = -1 Query: 337 PGVQPW------RRRRDAAVPGVPVHRPRRGEPHRLPAADAGQLQRQGPAAG 200 P PW RRR P HRPR HR PAA A R AAG Sbjct: 1209 PPPPPWAAGPLPRRRARCGCPRSHPHRPRAS--HRTPAAAAPHHHRHRRAAG 1258
>DPOL_ADE04 (P87503) DNA polymerase (EC 2.7.7.7)| Length = 1193 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/46 (41%), Positives = 21/46 (45%) Frame = -1 Query: 340 EPGVQPWRRRRDAAVPGVPVHRPRRGEPHRLPAADAGQLQRQGPAA 203 +PG QP RRR + PG V P R R PA A R P A Sbjct: 18 DPGRQPSRRRSRQSSPGA-VPEPARARRRRAPATTASG-SRAAPTA 61
>RNS11_NICAL (Q7SID5) Ribonuclease S-F11 (EC 3.1.27.1) (Stylar glycoprotein F11)| (SF11-RNase) Length = 196 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/70 (21%), Positives = 33/70 (47%) Frame = -2 Query: 453 RHNLTSILADAGIVPSDTETYFLSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCID 274 + +L L I+P + T+ I DAI+ + +++C G +L+++ C Sbjct: 114 KFDLLRTLQTHRIIPGSSYTF--QDIFDAIKTVSQENPDIKCAEVTKGTPELYEIGICFT 171 Query: 273 RDGENLIDCP 244 + +++ CP Sbjct: 172 PNADSMFRCP 181 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,151,376 Number of Sequences: 219361 Number of extensions: 1204145 Number of successful extensions: 3956 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3848 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3950 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)