ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal5p11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186248.2| Oryza sativa (japonica cultivar-group), mRNA 222 1e-54
2dbj|AK103156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
3ref|XM_473453.1| Oryza sativa (japonica cultivar-group), predic... 188 2e-44
4dbj|AK120749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 2e-44
5dbj|AK101071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 2e-44
6dbj|AK066109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 2e-44
7gb|BT016977.1| Zea mays clone EK07D2303C05.c mRNA sequence 107 5e-20
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
9dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
10emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4,... 82 3e-12
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
13dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
14dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
15gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, co... 44 0.59
16gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, comp... 44 0.59
17gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosom... 44 0.59
18gb|AC069141.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 44 0.59
19gb|AC147566.2| Mus musculus BAC clone RP23-106L10 from chromosom... 42 2.3
20gb|AC113033.13| Mus musculus chromosome 7, clone RP23-220I5, com... 42 2.3
21gb|AC115357.5| Mus musculus BAC clone RP23-81J4 from chromosome ... 42 2.3
22gb|AC073139.6| Homo sapiens BAC clone RP11-718D16 from 7, comple... 42 2.3
23gb|AC102647.8| Mus musculus chromosome 10, clone RP23-269A24, co... 42 2.3
24gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Canc... 42 2.3
25gb|AC008931.8| Homo sapiens chromosome 5 clone CTD-2294L1, compl... 42 2.3
26dbj|AK046851.1| Mus musculus 10 days neonate medulla oblongata c... 42 2.3
27dbj|AK045204.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 42 2.3
28gb|AC125028.8| Mus musculus chromosome 16, clone RP24-85G10, com... 40 9.1
29gb|AC110237.8| Mus musculus chromosome 5, clone RP23-104B24, com... 40 9.1
30gb|AC142326.1| Pan troglodytes BAC clone RP43-44O14 from 7, comp... 40 9.1
31emb|AL627260.7| Human DNA sequence from clone RP11-153E4 on chro... 40 9.1
32emb|AL663118.2| Human DNA sequence from clone RP13-377G1 on chro... 40 9.1
33emb|AL355485.9| Human DNA sequence from clone RP11-240M20 on chr... 40 9.1
34emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chrom... 40 9.1
35emb|AL133232.15| Human DNA sequence from clone RP5-897D18 on chr... 40 9.1
36emb|AL078590.28|HSA557H15 Human DNA sequence from clone RP11-557... 40 9.1
37emb|AL031599.1|HS15D23 Human DNA sequence from clone RP1-15D23 o... 40 9.1
38gb|AC155289.11| Mus musculus 6 BAC RP24-137B5 (Roswell Park Canc... 40 9.1
39gb|AC147918.2| Xenopus tropicalis clone CH216-8N16, complete seq... 40 9.1
40dbj|AP005653.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
41emb|AJ239323.3|HS519N18 Homo sapiens chromosome X sequencefrom P... 40 9.1
42gb|AC154667.2| Mus musculus BAC clone RP23-153F8 from 16, comple... 40 9.1
43gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Canc... 40 9.1
44emb|AM180900.1| Uncultured Acidobacteria bacterium partial 23S r... 40 9.1
45emb|AL844888.12| Mouse DNA sequence from clone RP23-193F18 on ch... 40 9.1 
>ref|NM_186248.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3974

 Score =  222 bits (112), Expect = 1e-54
 Identities = 167/186 (89%)
 Strand = Plus / Minus

                                                                        
Query: 484  tttgacagctctattccctgaactggtgtaaaggccaaactagatgtcagtccagatgtt 543
            ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1479 tttgatagttctattccctgaactggtgtaaaggccaaactagacgtcagtccagatgtt 1420

                                                                        
Query: 544  gcgccaccggtaccataactcctctccttgaatttctttgccactttggcagcaagtttg 603
            || |||| | ||||||| ||| ||||||||||||| || |||||||| ||||||||||||
Sbjct: 1419 gcaccactgctaccatagctcttctccttgaattttttggccactttagcagcaagtttg 1360

                                                                        
Query: 604  ttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagcatgccataacct 663
             ||||||||||||| |||||||||||||| ||| | ||||| |||||||||||||| |||
Sbjct: 1359 ctttgcgcagctgatacacgtagtttcccgcttcctgcctgtccaagcatgccatagcct 1300

                  
Query: 664  tncccc 669
            | ||||
Sbjct: 1299 tccccc 1294
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>dbj|AK103156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121A14, full
            insert sequence
          Length = 3974

 Score =  222 bits (112), Expect = 1e-54
 Identities = 167/186 (89%)
 Strand = Plus / Minus

                                                                        
Query: 484  tttgacagctctattccctgaactggtgtaaaggccaaactagatgtcagtccagatgtt 543
            ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1479 tttgatagttctattccctgaactggtgtaaaggccaaactagacgtcagtccagatgtt 1420

                                                                        
Query: 544  gcgccaccggtaccataactcctctccttgaatttctttgccactttggcagcaagtttg 603
            || |||| | ||||||| ||| ||||||||||||| || |||||||| ||||||||||||
Sbjct: 1419 gcaccactgctaccatagctcttctccttgaattttttggccactttagcagcaagtttg 1360

                                                                        
Query: 604  ttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagcatgccataacct 663
             ||||||||||||| |||||||||||||| ||| | ||||| |||||||||||||| |||
Sbjct: 1359 ctttgcgcagctgatacacgtagtttcccgcttcctgcctgtccaagcatgccatagcct 1300

                  
Query: 664  tncccc 669
            | ||||
Sbjct: 1299 tccccc 1294
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>ref|XM_473453.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1455

 Score =  188 bits (95), Expect = 2e-44
 Identities = 207/245 (84%)
 Strand = Plus / Minus

                                                                        
Query: 424  gtctcggagaaataggtgctctgggttccgcttccaagaaggttcccgtgcgcatgtggg 483
            ||||| || |||||||||||||| ||||| |||||||| ||||| ||||| || ||||| 
Sbjct: 1424 gtctctgaaaaataggtgctctgagttccacttccaagcaggttgccgtgggcctgtgga 1365

                                                                        
Query: 484  tttgacagctctattccctgaactggtgtaaaggccaaactagatgtcagtccagatgtt 543
            ||||||| |||||| ||||||||||||||||| ||||||||||| ||||| || ||||||
Sbjct: 1364 tttgacaactctatcccctgaactggtgtaaacgccaaactagaagtcagccccgatgtt 1305

                                                                        
Query: 544  gcgccaccggtaccataactcctctccttgaatttctttgccactttggcagcaagtttg 603
            || |||| | ||||||| ||| |||||||||||||||| |  | ||| |||| |||||||
Sbjct: 1304 gcaccactgctaccatagctcttctccttgaatttcttggtaatttttgcagaaagtttg 1245

                                                                        
Query: 604  ttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagcatgccataacct 663
             || | |||| ||| || ||||| || |||||| | ||||| ||||||||||||||||||
Sbjct: 1244 cttggtgcagttgacacgcgtagctttccacttcctgcctgtccaagcatgccataacct 1185

                 
Query: 664  tnccc 668
            | |||
Sbjct: 1184 tcccc 1180
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>dbj|AK120749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004O13, full
            insert sequence
          Length = 1829

 Score =  188 bits (95), Expect = 2e-44
 Identities = 207/245 (84%)
 Strand = Plus / Minus

                                                                        
Query: 424  gtctcggagaaataggtgctctgggttccgcttccaagaaggttcccgtgcgcatgtggg 483
            ||||| || |||||||||||||| ||||| |||||||| ||||| ||||| || ||||| 
Sbjct: 1665 gtctctgaaaaataggtgctctgagttccacttccaagcaggttgccgtgggcctgtgga 1606

                                                                        
Query: 484  tttgacagctctattccctgaactggtgtaaaggccaaactagatgtcagtccagatgtt 543
            ||||||| |||||| ||||||||||||||||| ||||||||||| ||||| || ||||||
Sbjct: 1605 tttgacaactctatcccctgaactggtgtaaacgccaaactagaagtcagccccgatgtt 1546

                                                                        
Query: 544  gcgccaccggtaccataactcctctccttgaatttctttgccactttggcagcaagtttg 603
            || |||| | ||||||| ||| |||||||||||||||| |  | ||| |||| |||||||
Sbjct: 1545 gcaccactgctaccatagctcttctccttgaatttcttggtaatttttgcagaaagtttg 1486

                                                                        
Query: 604  ttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagcatgccataacct 663
             || | |||| ||| || ||||| || |||||| | ||||| ||||||||||||||||||
Sbjct: 1485 cttggtgcagttgacacgcgtagctttccacttcctgcctgtccaagcatgccataacct 1426

                 
Query: 664  tnccc 668
            | |||
Sbjct: 1425 tcccc 1421
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>dbj|AK101071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024A09, full
            insert sequence
          Length = 1884

 Score =  188 bits (95), Expect = 2e-44
 Identities = 207/245 (84%)
 Strand = Plus / Minus

                                                                        
Query: 424  gtctcggagaaataggtgctctgggttccgcttccaagaaggttcccgtgcgcatgtggg 483
            ||||| || |||||||||||||| ||||| |||||||| ||||| ||||| || ||||| 
Sbjct: 1658 gtctctgaaaaataggtgctctgagttccacttccaagcaggttgccgtgggcctgtgga 1599

                                                                        
Query: 484  tttgacagctctattccctgaactggtgtaaaggccaaactagatgtcagtccagatgtt 543
            ||||||| |||||| ||||||||||||||||| ||||||||||| ||||| || ||||||
Sbjct: 1598 tttgacaactctatcccctgaactggtgtaaacgccaaactagaagtcagccccgatgtt 1539

                                                                        
Query: 544  gcgccaccggtaccataactcctctccttgaatttctttgccactttggcagcaagtttg 603
            || |||| | ||||||| ||| |||||||||||||||| |  | ||| |||| |||||||
Sbjct: 1538 gcaccactgctaccatagctcttctccttgaatttcttggtaatttttgcagaaagtttg 1479

                                                                        
Query: 604  ttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagcatgccataacct 663
             || | |||| ||| || ||||| || |||||| | ||||| ||||||||||||||||||
Sbjct: 1478 cttggtgcagttgacacgcgtagctttccacttcctgcctgtccaagcatgccataacct 1419

                 
Query: 664  tnccc 668
            | |||
Sbjct: 1418 tcccc 1414
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>dbj|AK066109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N06, full
            insert sequence
          Length = 2109

 Score =  188 bits (95), Expect = 2e-44
 Identities = 207/245 (84%)
 Strand = Plus / Minus

                                                                        
Query: 424  gtctcggagaaataggtgctctgggttccgcttccaagaaggttcccgtgcgcatgtggg 483
            ||||| || |||||||||||||| ||||| |||||||| ||||| ||||| || ||||| 
Sbjct: 1665 gtctctgaaaaataggtgctctgagttccacttccaagcaggttgccgtgggcctgtgga 1606

                                                                        
Query: 484  tttgacagctctattccctgaactggtgtaaaggccaaactagatgtcagtccagatgtt 543
            ||||||| |||||| ||||||||||||||||| ||||||||||| ||||| || ||||||
Sbjct: 1605 tttgacaactctatcccctgaactggtgtaaacgccaaactagaagtcagccccgatgtt 1546

                                                                        
Query: 544  gcgccaccggtaccataactcctctccttgaatttctttgccactttggcagcaagtttg 603
            || |||| | ||||||| ||| |||||||||||||||| |  | ||| |||| |||||||
Sbjct: 1545 gcaccactgctaccatagctcttctccttgaatttcttggtaatttttgcagaaagtttg 1486

                                                                        
Query: 604  ttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagcatgccataacct 663
             || | |||| ||| || ||||| || |||||| | ||||| ||||||||||||||||||
Sbjct: 1485 cttggtgcagttgacacgcgtagctttccacttcctgcctgtccaagcatgccataacct 1426

                 
Query: 664  tnccc 668
            | |||
Sbjct: 1425 tcccc 1421
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>gb|BT016977.1| Zea mays clone EK07D2303C05.c mRNA sequence
          Length = 442

 Score =  107 bits (54), Expect = 5e-20
 Identities = 114/134 (85%)
 Strand = Plus / Plus

                                                                       
Query: 412 gaaaatgtgcccgtctcggagaaataggtgctctgggttccgcttccaagaaggttcccg 471
           ||||||||||| |||||||| || || || || || ||||||| ||| |||||||| || 
Sbjct: 300 gaaaatgtgccggtctcggaaaagtaagtactttgagttccgcctccgagaaggtttcct 359

                                                                       
Query: 472 tgcgcatgtgggtttgacagctctattccctgaactggtgtaaaggccaaactagatgtc 531
           ||  | ||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||
Sbjct: 360 tggacctgtggatttgacaactctattccctgaactggtgtaaatgccaaactggatgtc 419

                         
Query: 532 agtccagatgttgc 545
           | ||| ||||||||
Sbjct: 420 aatcctgatgttgc 433
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                           
Query: 500     cctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcgccaccggtaccat 559
               |||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||
Sbjct: 2180093 cctgaactggtgtaaaggccaaactagacgtcagtccagatgttgcaccactgctaccat 2180034

                                
Query: 560     aactcctctccttgaat 576
               | ||| |||||||||||
Sbjct: 2180033 agctcttctccttgaat 2180017



 Score =  105 bits (53), Expect = 2e-19
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                           
Query: 583     gccactttggcagcaagtttgttttgcgcagctgagacacgtagtttcccacttncggcc 642
               |||||||| |||||||||||| ||||||||||||| |||||||||||||| ||| | |||
Sbjct: 2179228 gccactttagcagcaagtttgctttgcgcagctgatacacgtagtttcccgcttcctgcc 2179169

                                          
Query: 643     tgcccaagcatgccataaccttncccc 669
               || |||||||||||||| |||| ||||
Sbjct: 2179168 tgtccaagcatgccatagccttccccc 2179142
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>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                         
Query: 500   cctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcgccaccggtaccat 559
             |||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||
Sbjct: 47995 cctgaactggtgtaaaggccaaactagacgtcagtccagatgttgcaccactgctaccat 47936

                              
Query: 560   aactcctctccttgaat 576
             | ||| |||||||||||
Sbjct: 47935 agctcttctccttgaat 47919



 Score =  105 bits (53), Expect = 2e-19
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                         
Query: 583   gccactttggcagcaagtttgttttgcgcagctgagacacgtagtttcccacttncggcc 642
             |||||||| |||||||||||| ||||||||||||| |||||||||||||| ||| | |||
Sbjct: 47130 gccactttagcagcaagtttgctttgcgcagctgatacacgtagtttcccgcttcctgcc 47071

                                        
Query: 643   tgcccaagcatgccataaccttncccc 669
             || |||||||||||||| |||| ||||
Sbjct: 47070 tgtccaagcatgccatagccttccccc 47044
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>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24,
             complete sequence
          Length = 127506

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                         
Query: 500   cctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcgccaccggtaccat 559
             |||||||||||||||| ||||||||||| ||||| || |||||||| |||| | ||||||
Sbjct: 36845 cctgaactggtgtaaacgccaaactagaagtcagccccgatgttgcaccactgctaccat 36786

                              
Query: 560   aactcctctccttgaat 576
             | ||| |||||||||||
Sbjct: 36785 agctcttctccttgaat 36769



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 424   gtctcggagaaataggtgctctgggttccgcttccaagaaggttcccgtgcgcatgtggg 483
             ||||| || |||||||||||||| ||||| |||||||| ||||| ||||| || ||||| 
Sbjct: 37362 gtctctgaaaaataggtgctctgagttccacttccaagcaggttgccgtgggcctgtgga 37303

                                 
Query: 484   tttgacagctctattccctg 503
             ||||||| |||||| |||||
Sbjct: 37302 tttgacaactctatcccctg 37283



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                         
Query: 592   gcagcaagtttgttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagc 651
             |||| ||||||| || | |||| ||| || ||||| || |||||| | ||||| ||||||
Sbjct: 36518 gcagaaagtttgcttggtgcagttgacacgcgtagctttccacttcctgcctgtccaagc 36459

                              
Query: 652   atgccataaccttnccc 668
             ||||||||||||| |||
Sbjct: 36458 atgccataaccttcccc 36442
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                            
Query: 500      cctgaactggtgtaaaggccaaactagatgtcagtccagatgttgcgccaccggtaccat 559
                |||||||||||||||| ||||||||||| ||||| || |||||||| |||| | ||||||
Sbjct: 27768177 cctgaactggtgtaaacgccaaactagaagtcagccccgatgttgcaccactgctaccat 27768118

                                 
Query: 560      aactcctctccttgaat 576
                | ||| |||||||||||
Sbjct: 27768117 agctcttctccttgaat 27768101



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                            
Query: 424      gtctcggagaaataggtgctctgggttccgcttccaagaaggttcccgtgcgcatgtggg 483
                ||||| || |||||||||||||| ||||| |||||||| ||||| ||||| || ||||| 
Sbjct: 27768694 gtctctgaaaaataggtgctctgagttccacttccaagcaggttgccgtgggcctgtgga 27768635

                                    
Query: 484      tttgacagctctattccctg 503
                ||||||| |||||| |||||
Sbjct: 27768634 tttgacaactctatcccctg 27768615



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                            
Query: 592      gcagcaagtttgttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagc 651
                |||| ||||||| || | |||| ||| || ||||| || |||||| | ||||| ||||||
Sbjct: 27767850 gcagaaagtttgcttggtgcagttgacacgcgtagctttccacttcctgcctgtccaagc 27767791

                                 
Query: 652      atgccataaccttnccc 668
                ||||||||||||| |||
Sbjct: 27767790 atgccataaccttcccc 27767774
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                            
Query: 592      gcagcaagtttgttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagc 651
                ||||||||| || ||||  ||||| ||| |||||||||||||||| | || || ||||||
Sbjct: 30418070 gcagcaagtctgctttggccagctaagagacgtagtttcccacttcctgcttgtccaagc 30418129

                                 
Query: 652      atgccataaccttnccc 668
                | ||||||||||| |||
Sbjct: 30418130 aagccataacctttccc 30418146



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 24       caggaaaagaaaacaacaag 43
                ||||||||||||||||||||
Sbjct: 14569837 caggaaaagaaaacaacaag 14569818
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>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0072H09
          Length = 160541

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                         
Query: 592   gcagcaagtttgttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagc 651
             ||||||||| || ||||  ||||| ||| |||||||||||||||| | || || ||||||
Sbjct: 98930 gcagcaagtctgctttggccagctaagagacgtagtttcccacttcctgcttgtccaagc 98989

                              
Query: 652   atgccataaccttnccc 668
             | ||||||||||| |||
Sbjct: 98990 aagccataacctttccc 99006
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>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0617A09
          Length = 134804

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                         
Query: 592   gcagcaagtttgttttgcgcagctgagacacgtagtttcccacttncggcctgcccaagc 651
             ||||||||| || ||||  ||||| ||| |||||||||||||||| | || || ||||||
Sbjct: 24118 gcagcaagtctgctttggccagctaagagacgtagtttcccacttcctgcttgtccaagc 24177

                              
Query: 652   atgccataaccttnccc 668
             | ||||||||||| |||
Sbjct: 24178 aagccataacctttccc 24194
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>gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, complete sequence
          Length = 255036

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 14    aacaattccacaggaaaagaaa 35
             ||||||||||||||||||||||
Sbjct: 67425 aacaattccacaggaaaagaaa 67404
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>gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, complete sequence
          Length = 143534

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 25     aggaaaagaaaacaacaagtat 46
              ||||||||||||||||||||||
Sbjct: 107583 aggaaaagaaaacaacaagtat 107562
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>gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosome 3, complete sequence
          Length = 180084

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 14     aacaattccacaggaaaagaaa 35
              ||||||||||||||||||||||
Sbjct: 123269 aacaattccacaggaaaagaaa 123248
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>gb|AC069141.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-23G24, complete
              sequence
          Length = 197264

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 123    aatgggttctctagaaagaaaa 144
              ||||||||||||||||||||||
Sbjct: 123840 aatgggttctctagaaagaaaa 123861
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>gb|AC147566.2| Mus musculus BAC clone RP23-106L10 from chromosome 14, complete sequence
          Length = 174050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 104    agttcaacaattcagttccaa 124
              |||||||||||||||||||||
Sbjct: 161728 agttcaacaattcagttccaa 161748
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>gb|AC113033.13| Mus musculus chromosome 7, clone RP23-220I5, complete sequence
          Length = 177962

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    aattccacaggaaaagaaaac 37
             |||||||||||||||||||||
Sbjct: 74152 aattccacaggaaaagaaaac 74172
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>gb|AC115357.5| Mus musculus BAC clone RP23-81J4 from chromosome 14, complete sequence
          Length = 233685

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 104    agttcaacaattcagttccaa 124
              |||||||||||||||||||||
Sbjct: 194784 agttcaacaattcagttccaa 194764
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>gb|AC073139.6| Homo sapiens BAC clone RP11-718D16 from 7, complete sequence
          Length = 128635

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    attccacaggaaaagaaaacaacaa 42
             ||||||||| |||||||||||||||
Sbjct: 87698 attccacagtaaaagaaaacaacaa 87722
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>gb|AC102647.8| Mus musculus chromosome 10, clone RP23-269A24, complete sequence
          Length = 201670

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     agcacttcaacaattccacag 26
             |||||||||||||||||||||
Sbjct: 48703 agcacttcaacaattccacag 48683
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>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210101

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 6      agcacttcaacaattccacag 26
              |||||||||||||||||||||
Sbjct: 149231 agcacttcaacaattccacag 149211
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>gb|AC008931.8| Homo sapiens chromosome 5 clone CTD-2294L1, complete sequence
          Length = 140394

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 25    aggaaaagaaaacaacaagta 45
             |||||||||||||||||||||
Sbjct: 34644 aggaaaagaaaacaacaagta 34624
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>dbj|AK046851.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN
            full-length enriched library, clone:B830029A05
            product:unclassifiable, full insert sequence
          Length = 3244

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 17   aattccacaggaaaagaaaac 37
            |||||||||||||||||||||
Sbjct: 3109 aattccacaggaaaagaaaac 3089
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>dbj|AK045204.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
            enriched library, clone:B130046N11
            product:unclassifiable, full insert sequence
          Length = 4526

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 6    agcacttcaacaattccacag 26
            |||||||||||||||||||||
Sbjct: 3754 agcacttcaacaattccacag 3734
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>gb|AC125028.8| Mus musculus chromosome 16, clone RP24-85G10, complete sequence
          Length = 269788

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     cacaggaaaagaaaacaaca 41
              ||||||||||||||||||||
Sbjct: 120088 cacaggaaaagaaaacaaca 120069
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>gb|AC110237.8| Mus musculus chromosome 5, clone RP23-104B24, complete sequence
          Length = 243323

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 334    ctcttttaatctcacactcccttt 357
              ||||||||||||| ||||||||||
Sbjct: 100115 ctcttttaatctcccactcccttt 100092
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>gb|AC142326.1| Pan troglodytes BAC clone RP43-44O14 from 7, complete sequence
          Length = 120941

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    attccacaggaaaagaaaacaaca 41
             ||||||||| ||||||||||||||
Sbjct: 15300 attccacagtaaaagaaaacaaca 15323
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>emb|AL627260.7| Human DNA sequence from clone RP11-153E4 on chromosome 9, complete
            sequence
          Length = 110815

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  aaacaatcctctcttttaat 343
            ||||||||||||||||||||
Sbjct: 9002 aaacaatcctctcttttaat 9021
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>emb|AL663118.2| Human DNA sequence from clone RP13-377G1 on chromosome Xp11.22-11.3
              Contains the 3' end of the CLCN5 gene for chloride channel
              5 (nephrolithiasis 2, X-linked, Dent disease), the gene for
              a novel protein similar to peptide YY (PYY) and two CpG
              islands, complete sequence
          Length = 146633

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     aattccacaggaaaagaaaa 36
              ||||||||||||||||||||
Sbjct: 139421 aattccacaggaaaagaaaa 139440
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>emb|AL355485.9| Human DNA sequence from clone RP11-240M20 on chromosome 13, complete
              sequence
          Length = 149684

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     gaaaagaaaacaacaagtat 46
              ||||||||||||||||||||
Sbjct: 114332 gaaaagaaaacaacaagtat 114351
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>emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chromosome Xq22.2-23
             Contains a thyroid autoantigen 70kDa (Ku antigen) (G22P1)
             pseudogene, complete sequence
          Length = 133402

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 578   tctttgccactttggcagca 597
             ||||||||||||||||||||
Sbjct: 99390 tctttgccactttggcagca 99371
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>emb|AL133232.15| Human DNA sequence from clone RP5-897D18 on chromosome 20 Contains part
             of a gene for a  putative novel protein, EST, STSs and
             GSSs, complete sequence
          Length = 95097

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   tagaaagaaaagattatcca 153
             ||||||||||||||||||||
Sbjct: 90169 tagaaagaaaagattatcca 90150
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>emb|AL078590.28|HSA557H15 Human DNA sequence from clone RP11-557H15 on chromosome 6q23.1-23.3
              Contains three novel genes, the 3' part of a novel gene and
              a member A1 of family with sequence similarity 8 (FAM8A1)
              pseudogene, complete sequence
          Length = 195021

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    cctgacttcagaccttgtca 193
              ||||||||||||||||||||
Sbjct: 153685 cctgacttcagaccttgtca 153666
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>emb|AL031599.1|HS15D23 Human DNA sequence from clone RP1-15D23 on chromosome 1q24-25 Contains
             the TNFSF18 gene for tumor necrosis factor (ligand)
             superfamily member 18, complete sequence
          Length = 163136

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    acaggaaaagaaaacaacaa 42
             ||||||||||||||||||||
Sbjct: 84253 acaggaaaagaaaacaacaa 84272
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>gb|AC155289.11| Mus musculus 6 BAC RP24-137B5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 133835

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 9      acttcaacaattccacaggaaaagaaaa 36
              |||||| |||||||||||| ||||||||
Sbjct: 125223 acttcagcaattccacaggcaaagaaaa 125196
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>gb|AC147918.2| Xenopus tropicalis clone CH216-8N16, complete sequence
          Length = 210128

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   gcatgtgggtttgacagctc 494
             ||||||||||||||||||||
Sbjct: 83723 gcatgtgggtttgacagctc 83742
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>dbj|AP005653.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0075E08
          Length = 130947

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    caggaaaagaaaacaacaag 43
             ||||||||||||||||||||
Sbjct: 73853 caggaaaagaaaacaacaag 73834
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>emb|AJ239323.3|HS519N18 Homo sapiens chromosome X sequencefrom PAC RPCI-3 519N18 map Xp11.2,
             complete sequence
          Length = 102853

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    aattccacaggaaaagaaaa 36
             ||||||||||||||||||||
Sbjct: 97549 aattccacaggaaaagaaaa 97568
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>gb|AC154667.2| Mus musculus BAC clone RP23-153F8 from 16, complete sequence
          Length = 195017

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    aattccacaggaaaagaaaa 36
             ||||||||||||||||||||
Sbjct: 32987 aattccacaggaaaagaaaa 32968
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>gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 218409

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 9      acttcaacaattccacaggaaaagaaaa 36
              |||||| |||||||||||| ||||||||
Sbjct: 195235 acttcagcaattccacaggcaaagaaaa 195262
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>emb|AM180900.1| Uncultured Acidobacteria bacterium partial 23S rRNA gene, clone
          LS_LKC11_kan6
          Length = 1811

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 ccacaggaaaagaaaacaac 40
          ||||||||||||||||||||
Sbjct: 22 ccacaggaaaagaaaacaac 41
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>emb|AL844888.12| Mouse DNA sequence from clone RP23-193F18 on chromosome 2, complete
              sequence
          Length = 225216

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    tcccttttcatcttcagatt 370
              ||||||||||||||||||||
Sbjct: 125152 tcccttttcatcttcagatt 125171


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,214,622
Number of Sequences: 3902068
Number of extensions: 6214622
Number of successful extensions: 115651
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115416
Number of HSP's gapped (non-prelim): 235
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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