Clone Information

BLAST Search Result

Clone Name	rbaal6e06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL18_ARATH (P42791) 60S ribosomal protein L18	244	1e-64
2	RL18_CICAR (O65729) 60S ribosomal protein L18 (Fragment)	231	2e-60
3	RL18_HUMAN (Q07020) 60S ribosomal protein L18	206	6e-53
4	RL18_RAT (P12001) 60S ribosomal protein L18	204	2e-52
5	RL18_MOUSE (P35980) 60S ribosomal protein L18	204	2e-52
6	RL18_ICTPU (Q90YV0) 60S ribosomal protein L18	201	1e-51
7	RL18_ORENI (P69091) 60S ribosomal protein L18	201	1e-51
8	RL18_OREMO (P69090) 60S ribosomal protein L18	201	1e-51
9	RL18B_XENLA (P02412) 60S ribosomal protein L18-B (L14B)	200	3e-51
10	RL18A_XENLA (P09897) 60S ribosomal protein L18-A (L14A)	196	6e-50
11	RL18B_SCHPO (Q8TFH1) 60S ribosomal protein L18-B	185	1e-46
12	RL18A_SCHPO (Q10192) 60S ribosomal protein L18-A	183	4e-46
13	RL18_YEAST (P07279) 60S ribosomal protein L18 (RP28)	176	5e-44
14	RL18_TRYBB (P50885) 60S ribosomal protein L18	154	2e-37
15	RL18_SALSA (P24558) 60S ribosomal protein L18	120	3e-27
16	RL18_PIG (Q95342) 60S ribosomal protein L18 (Fragment)	84	3e-16
17	RL18E_PYRAB (Q9V197) 50S ribosomal protein L18e	46	1e-04
18	RL18E_PYRKO (Q5JJF5) 50S ribosomal protein L18e	45	2e-04
19	RL18E_PYRHO (O59302) 50S ribosomal protein L18e	44	3e-04
20	RL18E_METJA (P54022) 50S ribosomal protein L18e	44	4e-04
21	RL18E_PYRFU (Q8U0E5) 50S ribosomal protein L18e	44	5e-04
22	RL18E_METKA (Q8TVB7) 50S ribosomal protein L18e	42	0.002
23	RL18E_METTH (O26145) 50S ribosomal protein L18e	40	0.004
24	RL18E_ARCFU (O29138) 50S ribosomal protein L18e	36	0.10
25	RL18E_METMP (Q6LXM7) 50S ribosomal protein L18e	35	0.13
26	RL18E_METMA (Q8PW46) 50S ribosomal protein L18e	33	0.87
27	MYST4_MACFA (Q8WML3) Histone acetyltransferase MYST4 (EC 2.3.1.4...	32	1.1
28	RL18E_METAC (Q8TT44) 50S ribosomal protein L18e	32	1.5
29	MURD_RHILO (Q98KB1) UDP-N-acetylmuramoylalanine--D-glutamate lig...	32	1.9
30	IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2	32	1.9
31	MYST4_MOUSE (Q8BRB7) Histone acetyltransferase MYST4 (EC 2.3.1.4...	31	3.3
32	HOXV_AZOVI (P40597) Hydrogenase expression/formation protein hoxV	31	3.3
33	HUPK_AZOVI (P31878) Hydrogenase expression/formation protein hupK	31	3.3
34	RL18E_THEAC (Q9HL06) 50S ribosomal protein L18e	30	4.3
35	BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6...	30	4.3
36	RL18E_PYRAE (Q8ZYQ2) 50S ribosomal protein L18e	30	5.7
37	NPDC1_MOUSE (Q64322) Neural proliferation differentiation and co...	30	5.7
38	MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.4...	30	5.7
39	TIM50_YARLI (Q6CDV7) Import inner membrane translocase subunit T...	30	7.4
40	GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)	30	7.4
41	PACC_GIBFU (Q8J1U9) pH-response transcription factor pacC/RIM101	30	7.4
42	PACC_GIBMO (Q873X0) pH-response transcription factor pacC/RIM101	30	7.4
43	PHYK_MAIZE (Q2N2K4) Probable phytol kinase, chloroplast precurso...	30	7.4
44	PHYK2_SOYBN (Q2N2K2) Probable phytol kinase 2, chloroplast precu...	30	7.4
45	PROB_STRAW (Q82C83) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut...	29	9.7
46	PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101	29	9.7
47	NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleo...	29	9.7
48	NRX3A_RAT (Q07310) Neurexin-3-alpha precursor (Neurexin III-alpha)	29	9.7

>RL18_ARATH (P42791) 60S ribosomal protein L18|
          Length = 187

 Score =  244 bits (623), Expect = 1e-64
 Identities = 121/150 (80%), Positives = 134/150 (89%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAM 440
           RT SKFN VILKRLFMSK N+ PLS+ RL  FM GKE+K IAV+VGTITDD+R+ EIPAM
Sbjct: 39  RTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDK-IAVLVGTITDDLRVHEIPAM 97

Query: 439 KVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGV 260
           KVTALRFTE ARARI  AGGECLTFDQLALRAP G+NT+LLRGPKN+REAV+HFG APGV
Sbjct: 98  KVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGV 157

Query: 259 PHSHTKPYVRSKGRKFEKARGRRNSRGFKV 170
           PHSH+KPYVR+KGRKFEKARG+R SRGFKV
Sbjct: 158 PHSHSKPYVRAKGRKFEKARGKRKSRGFKV 187

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>RL18_CICAR (O65729) 60S ribosomal protein L18 (Fragment)|
          Length = 183

 Score =  231 bits (588), Expect = 2e-60
 Identities = 116/150 (77%), Positives = 130/150 (86%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAM 440
           RT S FNAVILKRLFMSK NRPPLS+ RL  +M+GKE K I VVVG +TDD+R+ ++P +
Sbjct: 36  RTDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQGKEGK-IGVVVGAVTDDIRVYDVPTI 94

Query: 439 KVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGV 260
           KVTAL+FTETARARI  AGGECLTFDQLALR P  + T+LLRGPKNAREAV+HFG APGV
Sbjct: 95  KVTALKFTETARARIQKAGGECLTFDQLALRLPLTD-TVLLRGPKNAREAVKHFGPAPGV 153

Query: 259 PHSHTKPYVRSKGRKFEKARGRRNSRGFKV 170
           PHSHTKPYVRSKGRKFEKARGRR SRGF+V
Sbjct: 154 PHSHTKPYVRSKGRKFEKARGRRKSRGFRV 183

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>RL18_HUMAN (Q07020) 60S ribosomal protein L18|
          Length = 187

 Score =  206 bits (523), Expect = 6e-53
 Identities = 104/151 (68%), Positives = 121/151 (80%), Gaps = 2/151 (1%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIP 446
           RT S FN V+LKRLFMS+TNRPPLS+ R+   MK  G+E K  AVVVGTITDD+R+QE+P
Sbjct: 37  RTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKT-AVVVGTITDDVRVQEVP 95

Query: 445 AMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAP 266
            +KV ALR T  AR+RI+ AGG+ LTFDQLAL +P G  T+LL GP+  RE  RHFGKAP
Sbjct: 96  KLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAP 155

Query: 265 GVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 173
           G PHSHTKPYVRSKGRKFE+ARGRR SRG+K
Sbjct: 156 GTPHSHTKPYVRSKGRKFERARGRRASRGYK 186

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>RL18_RAT (P12001) 60S ribosomal protein L18|
          Length = 187

 Score =  204 bits (519), Expect = 2e-52
 Identities = 103/151 (68%), Positives = 120/151 (79%), Gaps = 2/151 (1%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIP 446
           RT S FN V+LKRLFMS+TNRPPLS+ R+   MK  G+E K  AVVVGTITDD+RI E+P
Sbjct: 37  RTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKT-AVVVGTITDDVRILEVP 95

Query: 445 AMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAP 266
            +KV ALR +  AR+RI+ AGG+ LTFDQLAL +P G  T+LL GP+  RE  RHFGKAP
Sbjct: 96  KLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAP 155

Query: 265 GVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 173
           G PHSHTKPYVRSKGRKFE+ARGRR SRG+K
Sbjct: 156 GTPHSHTKPYVRSKGRKFERARGRRASRGYK 186

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>RL18_MOUSE (P35980) 60S ribosomal protein L18|
          Length = 187

 Score =  204 bits (518), Expect = 2e-52
 Identities = 102/151 (67%), Positives = 120/151 (79%), Gaps = 2/151 (1%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIP 446
           RT S FN V+LKRLFMS+TNRPPLS+ R+   MK  G+E K  AVVVGT+TDD+RI E+P
Sbjct: 37  RTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKT-AVVVGTVTDDVRILEVP 95

Query: 445 AMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAP 266
            +KV ALR +  AR+RI+ AGG+ LTFDQLAL +P G  T+LL GP+  RE  RHFGKAP
Sbjct: 96  KLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAP 155

Query: 265 GVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 173
           G PHSHTKPYVRSKGRKFE+ARGRR SRG+K
Sbjct: 156 GTPHSHTKPYVRSKGRKFERARGRRASRGYK 186

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>RL18_ICTPU (Q90YV0) 60S ribosomal protein L18|
          Length = 187

 Score =  201 bits (512), Expect = 1e-51
 Identities = 102/151 (67%), Positives = 120/151 (79%), Gaps = 2/151 (1%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIP 446
           R+ + FN V+LKRLFMSKTNRPPL++ RL   MK  G+E K IAVVVGTITDD+RI  IP
Sbjct: 37  RSDAPFNKVVLKRLFMSKTNRPPLALSRLIRKMKLQGRENK-IAVVVGTITDDVRILNIP 95

Query: 445 AMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAP 266
            +KV ALR T  AR RI+ AGG+ +TFDQLA+  P G+ T+LL GP+ ARE  RHFGKAP
Sbjct: 96  KLKVCALRVTAGARRRILKAGGQVMTFDQLAVTTPKGQGTVLLSGPRKAREVYRHFGKAP 155

Query: 265 GVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 173
           G PHSHTKPY+RSKGRKFE+ARGRR SRG+K
Sbjct: 156 GTPHSHTKPYIRSKGRKFERARGRRASRGYK 186

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>RL18_ORENI (P69091) 60S ribosomal protein L18|
          Length = 187

 Score =  201 bits (511), Expect = 1e-51
 Identities = 99/151 (65%), Positives = 123/151 (81%), Gaps = 2/151 (1%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIP 446
           R+ + FN V+L+RLFMS+TNRPP+++ RL   MK  G+E K IAVVVGT+TDD+RIQ+IP
Sbjct: 37  RSNAPFNRVVLRRLFMSRTNRPPIAVSRLIRKMKLPGRENK-IAVVVGTVTDDVRIQDIP 95

Query: 445 AMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAP 266
            +K+ ALR T+ AR RI+ AGG+ +TFDQLAL +P G+ T+LL GP+ ARE  RHFGKAP
Sbjct: 96  KLKICALRVTDGARRRILKAGGQVMTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAP 155

Query: 265 GVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 173
           G PHSHTKPYVRSKGRKFE+ARGRR S G+K
Sbjct: 156 GTPHSHTKPYVRSKGRKFERARGRRASCGYK 186

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>RL18_OREMO (P69090) 60S ribosomal protein L18|
          Length = 187

 Score =  201 bits (511), Expect = 1e-51
 Identities = 99/151 (65%), Positives = 123/151 (81%), Gaps = 2/151 (1%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIP 446
           R+ + FN V+L+RLFMS+TNRPP+++ RL   MK  G+E K IAVVVGT+TDD+RIQ+IP
Sbjct: 37  RSNAPFNRVVLRRLFMSRTNRPPIAVSRLIRKMKLPGRENK-IAVVVGTVTDDVRIQDIP 95

Query: 445 AMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAP 266
            +K+ ALR T+ AR RI+ AGG+ +TFDQLAL +P G+ T+LL GP+ ARE  RHFGKAP
Sbjct: 96  KLKICALRVTDGARRRILKAGGQVMTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAP 155

Query: 265 GVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 173
           G PHSHTKPYVRSKGRKFE+ARGRR S G+K
Sbjct: 156 GTPHSHTKPYVRSKGRKFERARGRRASCGYK 186

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>RL18B_XENLA (P02412) 60S ribosomal protein L18-B (L14B)|
          Length = 187

 Score =  200 bits (508), Expect = 3e-51
 Identities = 102/151 (67%), Positives = 119/151 (78%), Gaps = 2/151 (1%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIP 446
           RT S FN V+LKRLFMS+TNRPPLSM RL   MK  G+E K  AVVVG ITDD+RI +IP
Sbjct: 37  RTNSSFNRVVLKRLFMSRTNRPPLSMSRLIRKMKLQGRENKT-AVVVGYITDDVRIHDIP 95

Query: 445 AMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAP 266
            +KV AL+ T   R+RI+ +GG+ +TFDQLAL AP G+NT+LL GP+ ARE  RHFGKAP
Sbjct: 96  KLKVCALKITSGDRSRILKSGGQIMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAP 155

Query: 265 GVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 173
           G PHS TKPYV SKGRKFE+ARGRR SRG+K
Sbjct: 156 GTPHSRTKPYVLSKGRKFERARGRRASRGYK 186

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>RL18A_XENLA (P09897) 60S ribosomal protein L18-A (L14A)|
          Length = 187

 Score =  196 bits (497), Expect = 6e-50
 Identities = 99/150 (66%), Positives = 115/150 (76%), Gaps = 1/150 (0%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK-GKEEKNIAVVVGTITDDMRIQEIPA 443
           RT S FN V+LKRLFMS+TNRPPLSM RL   MK  + E   AVVVG IT D+RI +IP 
Sbjct: 37  RTNSSFNRVVLKRLFMSRTNRPPLSMSRLIRKMKLPRRENKTAVVVGCITADVRIHDIPK 96

Query: 442 MKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPG 263
           + V AL+ T  AR+RI+ AGG+ +TFDQLAL AP G+NT+LL GP+ ARE  RHFGKAP 
Sbjct: 97  LTVCALKLTSGARSRILKAGGQIMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPS 156

Query: 262 VPHSHTKPYVRSKGRKFEKARGRRNSRGFK 173
            PHS TKPYV SKGRKFE+ARGRR SRG+K
Sbjct: 157 TPHSRTKPYVLSKGRKFERARGRRASRGYK 186

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>RL18B_SCHPO (Q8TFH1) 60S ribosomal protein L18-B|
          Length = 187

 Score =  185 bits (469), Expect = 1e-46
 Identities = 95/153 (62%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKE---EKNIAVVVGTITDDMRIQEI 449
           RT S+FN  ILKRLF SKTNRPP+S+ +++     K    E    V+VGT+TDD R+  +
Sbjct: 38  RTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTV 97

Query: 448 PAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKA 269
           P + V ALRFT++ARARI+ AGGE LT DQLALRAPTG NT+LLRG K+AREA RHFG  
Sbjct: 98  PKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFG 157

Query: 268 PGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 170
              PH H  PYVRS+GRKFE+ARGRR SR FKV
Sbjct: 158 ---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187

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>RL18A_SCHPO (Q10192) 60S ribosomal protein L18-A|
          Length = 187

 Score =  183 bits (464), Expect = 4e-46
 Identities = 93/153 (60%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKE---EKNIAVVVGTITDDMRIQEI 449
           RT S+FN  ILKRLF SKTNRPP+S+ +++     K    +    VVVGT+TDD R+  +
Sbjct: 38  RTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTV 97

Query: 448 PAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKA 269
           P + + ALRFT++ARARI+ AGGE LT DQLALRAPTG NT+L+RG K+AREA RHFG  
Sbjct: 98  PKLSIAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFG 157

Query: 268 PGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 170
              PH H  PYVRS+GRKFE+ARGRR SR FKV
Sbjct: 158 ---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187

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>RL18_YEAST (P07279) 60S ribosomal protein L18 (RP28)|
          Length = 186

 Score =  176 bits (446), Expect = 5e-44
 Identities = 90/151 (59%), Positives = 111/151 (73%), Gaps = 1/151 (0%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKN-IAVVVGTITDDMRIQEIPA 443
           RT + FN V+LK LF+SK NRPP+S+ R++  +K +   N   VVVGT+TDD RI E P 
Sbjct: 39  RTDAPFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPK 98

Query: 442 MKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPG 263
             V ALRFT  ARA+IV AGGEC+T DQLA+RAP G+NT++LRGP+N+REAVRHFG    
Sbjct: 99  TTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG-- 156

Query: 262 VPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 170
            PH    P + S GRKFE+ARGRR S+GFKV
Sbjct: 157 -PHKGKAPRILSTGRKFERARGRRRSKGFKV 186

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>RL18_TRYBB (P50885) 60S ribosomal protein L18|
          Length = 193

 Score =  154 bits (390), Expect = 2e-37
 Identities = 79/152 (51%), Positives = 112/152 (73%), Gaps = 7/152 (4%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLS-------MRRLSNFMKGKEEKNIAVVVGTITDDMR 461
           RT S FN +I KRL  S+ NR P+S       MRR + ++K  ++  IAV+VG + DD+R
Sbjct: 39  RTNSPFNKLIHKRLLKSRNNRAPISLSRIAVCMRRRTVWLKKGKKSPIAVIVGDVLDDVR 98

Query: 460 IQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRH 281
           +  IPA+++ ALRF+++AR RI  AGGECLTFDQLA+ APTG+NT+LLRG K+ RE+V+H
Sbjct: 99  MTRIPALRICALRFSKSARERITGAGGECLTFDQLAMMAPTGKNTMLLRGRKSGRESVKH 158

Query: 280 FGKAPGVPHSHTKPYVRSKGRKFEKARGRRNS 185
           FG A GVP SH KP+V S+G++ +++  RR++
Sbjct: 159 FG-AAGVPGSHAKPHVSSRGKERQRSSKRRHA 189

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>RL18_SALSA (P24558) 60S ribosomal protein L18|
          Length = 179

 Score =  120 bits (301), Expect = 3e-27
 Identities = 66/128 (51%), Positives = 89/128 (69%), Gaps = 2/128 (1%)
 Frame = -1

Query: 604 FNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIPAMKVT 431
           FN V+L+RLFMS+T+RPP+S+ R+   MK  G+E +  AVVVGT+TDD+RI EIP +KV+
Sbjct: 42  FNKVVLRRLFMSRTHRPPMSVSRMIRKMKLPGRENRT-AVVVGTVTDDVRIHEIPNLKVS 100

Query: 430 ALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHS 251
           AL+ T   R RI+    + + F  LAL AP  + ++LL  P+NAR+  RHF  AP +P  
Sbjct: 101 ALKITRRNRTRILKF-VQIMRFVGLALAAPNRQKSVLLSAPRNARDVSRHFANAPSIP-- 157

Query: 250 HTKPYVRS 227
           HTKPYV S
Sbjct: 158 HTKPYVLS 165

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>RL18_PIG (Q95342) 60S ribosomal protein L18 (Fragment)|
          Length = 103

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIP 446
           RT S FN V+LKRLFMS+TNRPPLS+ R+   MK  G+E K  AVVVGTITDD+R QE+P
Sbjct: 37  RTNSTFNQVVLKRLFMSRTNRPPLSLSRMXRKMKLPGREGKT-AVVVGTITDDVRFQEVP 95

Query: 445 AMKVTALR 422
            +KV ALR
Sbjct: 96  KLKVCALR 103

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>RL18E_PYRAB (Q9V197) 50S ribosomal protein L18e|
          Length = 120

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 27/89 (30%), Positives = 51/89 (57%)
 Frame = -1

Query: 583 RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETAR 404
           RL   +  R  +++ R++ + K   + ++ VV G++    +I++   + V A +F+ETAR
Sbjct: 36  RLERPRRQRAEVNVSRINRYAK---DGDMIVVPGSVLGAGKIEK--KVIVAAWKFSETAR 90

Query: 403 ARIVNAGGECLTFDQLALRAPTGENTILL 317
            +I  AGGE +T ++L  R P G   I++
Sbjct: 91  RKIEEAGGEAITIEELIKRNPKGSGVIIM 119

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>RL18E_PYRKO (Q5JJF5) 50S ribosomal protein L18e|
          Length = 121

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 24/89 (26%), Positives = 50/89 (56%)
 Frame = -1

Query: 583 RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETAR 404
           RL   +  R  +++ +++ + K   E ++ +V G++    R++    + V A +F+E AR
Sbjct: 37  RLERPRRQRAEVNISKINRYTK---EGDVVIVPGSVLGAGRLEH--KVVVAAWKFSEAAR 91

Query: 403 ARIVNAGGECLTFDQLALRAPTGENTILL 317
            +I+ AGGE ++ ++L  R P G   I++
Sbjct: 92  RKIIEAGGEAISIEELMERNPKGSGVIIM 120

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>RL18E_PYRHO (O59302) 50S ribosomal protein L18e|
          Length = 120

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 25/89 (28%), Positives = 51/89 (57%)
 Frame = -1

Query: 583 RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETAR 404
           RL   +  R  +++ +++ + K   + ++ VV G++    ++++   + V A +F+ETAR
Sbjct: 36  RLERPRRQRAEVNVSKINRYAK---DGDMIVVPGSVLGAGKLEK--KVIVAAWKFSETAR 90

Query: 403 ARIVNAGGECLTFDQLALRAPTGENTILL 317
            +I  AGGE +T ++L  R P G   I++
Sbjct: 91  KKITEAGGEAITIEELIERNPKGSGVIIM 119

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>RL18E_METJA (P54022) 50S ribosomal protein L18e|
          Length = 121

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 26/101 (25%), Positives = 53/101 (52%)
 Frame = -1

Query: 619 RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAM 440
           + ++K    I +RL   +  R  +++ +++ + K   E ++ +V G +    +++    +
Sbjct: 25  KNQAKIWKDIARRLAKPRRRRAEVNLSKINRYTK---EGDVVLVPGKVLGAGKLEH--KV 79

Query: 439 KVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 317
            V A  F+ETA+  I  AGGE +T ++L  R P G N  ++
Sbjct: 80  VVAAFAFSETAKKLIKEAGGEAITIEELIKRNPKGSNVKIM 120

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>RL18E_PYRFU (Q8U0E5) 50S ribosomal protein L18e|
          Length = 120

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 25/89 (28%), Positives = 50/89 (56%)
 Frame = -1

Query: 583 RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETAR 404
           RL   +  R  +++ +++ +    E   + VV G++    ++++   + V A +F+ETAR
Sbjct: 36  RLERPRRQRAEVNVSKINRYANDGE---MIVVPGSVLGAGKLEK--KVIVAAWKFSETAR 90

Query: 403 ARIVNAGGECLTFDQLALRAPTGENTILL 317
            +I+ AGGE +T ++L  R PTG    ++
Sbjct: 91  RKIIEAGGEAITIEELIERNPTGSGVRIM 119

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>RL18E_METKA (Q8TVB7) 50S ribosomal protein L18e|
          Length = 127

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = -1

Query: 592 ILKRLFMSKTNRPPLSMRRLSNFMKGK--EEKNIAVVVGTITDDMRIQEIPAMKVTALRF 419
           + +RL   +  R  +++ +L    +    +E+   +V G +  D  I +   ++V A RF
Sbjct: 35  VAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ--PLRVAAWRF 92

Query: 418 TETARARIVNAGGECLTFDQLALRAPTG 335
           + TAR +I  AGGECLT  +L    P G
Sbjct: 93  SRTARMKIEAAGGECLTIRELLEENPEG 120

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>RL18E_METTH (O26145) 50S ribosomal protein L18e|
          Length = 121

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
 Frame = -1

Query: 592 ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAV---VVGTITDDMRIQEIPAMKVTALR 422
           + +RL     NR  +++ +++      E++ + V   V+G+   D R+Q      V AL 
Sbjct: 34  VARRLERPTRNRAAVNISKINRH--SDEDETVLVPGKVLGSGNLDHRVQ------VVALS 85

Query: 421 FTETARARIVNAGGECLTFDQLALRAPTGEN 329
           F++TAR +I  AGGECLT  ++    P  +N
Sbjct: 86  FSQTARDKIERAGGECLTLGKIVEENPAIKN 116

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>RL18E_ARCFU (O29138) 50S ribosomal protein L18e|
          Length = 117

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 24/92 (26%), Positives = 44/92 (47%)
 Frame = -1

Query: 592 ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTE 413
           + +RL   +  +  +++ ++  + K  E     VV G +     I +   +KV AL F+E
Sbjct: 30  VAERLAKPRRLQAEVNVSKIEKYAKPNE---YVVVPGKVLGSGSITK--PVKVAALSFSE 84

Query: 412 TARARIVNAGGECLTFDQLALRAPTGENTILL 317
            A ++I  AGG C+  ++L    P G    L+
Sbjct: 85  KAASKIREAGGVCMKIEELLKENPKGSGVRLM 116

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>RL18E_METMP (Q6LXM7) 50S ribosomal protein L18e|
          Length = 120

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 436 VTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 317
           V A  F+ETA++ I   GG+CLT ++L    P G    ++
Sbjct: 80  VAAFSFSETAKSAIEAVGGKCLTIEELIAENPKGSKVTIM 119

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>RL18E_METMA (Q8PW46) 50S ribosomal protein L18e|
          Length = 126

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 22/93 (23%), Positives = 45/93 (48%)
 Frame = -1

Query: 592 ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTE 413
           I KRL     N   +++ +++   +   E ++ +V G +     +     + V A+ F+E
Sbjct: 39  IAKRLEAPSRNYAAVNISKIN---RHTAENDVLLVPGKVLGAGLLDH--PVTVAAVTFSE 93

Query: 412 TARARIVNAGGECLTFDQLALRAPTGENTILLR 314
           +A  +I  AGG+CL+ +++    P G    + R
Sbjct: 94  SAVEKITEAGGKCLSVEEIMEANPKGSGIRIFR 126

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>MYST4_MACFA (Q8WML3) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            4)
          Length = 1784

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
 Frame = +1

Query: 34   SKYHSNTGAIDCAALSTKYFTNYCQLLKQNNSRSTQTATNQKGQLKP*SHGCSSYHEPSQ 213
            S Y S  G   C   S++   +Y  L   + ++S+   T Q   +   S  CS   + S 
Sbjct: 1395 SSYDSTMGGSICGNGSSQNSCSYSNLTSSSLTQSSCAVTQQMSNI---SGSCSMLQQTSI 1451

Query: 214  TSYPWSAHRAWCGCAAHQEPCRSA-----------SPPHGHSWVPSTGSCS 333
            +S P  + ++  GC   + P  S            +PP   + +P TG+ +
Sbjct: 1452 SSPPTCSVKSPQGCVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETGNAN 1502

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>RL18E_METAC (Q8TT44) 50S ribosomal protein L18e|
          Length = 126

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -1

Query: 436 VTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLR 314
           + AL F+++A  +I  AGG+CL+ +++    P G    + R
Sbjct: 86  IAALTFSDSAFEKITEAGGKCLSLEEIMEANPKGSGIRIFR 126

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>MURD_RHILO (Q98KB1) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 466

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
 Frame = -1

Query: 412 TARARIVNAGGECLTFDQ----LALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHT 245
           TARA ++  G + L +D     +A  A TG  T  LRG   A+ +   F  +PGVP +H 
Sbjct: 24  TARA-LIEGGAQVLAWDDNPDSVAKAAATGIATADLRGADWAKFSA--FVLSPGVPLTHP 80

Query: 244 KPY 236
           KP+
Sbjct: 81  KPH 83

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>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2|
          Length = 954

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 26/82 (31%), Positives = 35/82 (42%)
 Frame = +1

Query: 151 NQKGQLKP*SHGCSSYHEPSQTSYPWSAHRAWCGCAAHQEPCRSASPPHGHSWVPSTGSC 330
           N KG  KP          P+  S P S   +    AA   P R ASP   H   P+ G+ 
Sbjct: 54  NAKGDSKP-----VQQRRPAAPSAPASTSSSAPTPAA---PARQASPASAHQQAPTPGAP 105

Query: 331 SPQLEHGEQAGQK*GTPHQH*Q 396
           +P+ + G + G    TP +H Q
Sbjct: 106 TPRPQGGARPGMP--TPGRHGQ 125

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>MYST4_MOUSE (Q8BRB7) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            4) (Querkopf protein)
          Length = 1872

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 21/83 (25%), Positives = 35/83 (42%)
 Frame = +1

Query: 34   SKYHSNTGAIDCAALSTKYFTNYCQLLKQNNSRSTQTATNQKGQLKP*SHGCSSYHEPSQ 213
            S Y S  G   C   S++   +Y  L   N ++++   T Q   +   S  CS   + S 
Sbjct: 1483 SSYDSTMGGSICGNGSSQNSCSYSSLTSSNLTQNSCAVTQQMSNI---SGSCSMLQQTSI 1539

Query: 214  TSYPWSAHRAWCGCAAHQEPCRS 282
            +S P  + ++  GC   + P  S
Sbjct: 1540 SSPPTCSVKSPQGCVVERPPSSS 1562

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>HOXV_AZOVI (P40597) Hydrogenase expression/formation protein hoxV|
          Length = 348

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +3

Query: 171 TLKPRLFLLPRAFSNFLPLERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGAR 350
           +++  L  L + +   +PLER   L+ LC    A  + LTA RA   P +  +   + A 
Sbjct: 95  SIRESLLRLVQVWELPVPLERLKALLALCRRAAARLQALTAFRAAPLPADAELEGTLAAL 154

Query: 351 RASWSKVRHSPPA 389
            A+W+ ++   PA
Sbjct: 155 AAAWADLQPPAPA 167

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>HUPK_AZOVI (P31878) Hydrogenase expression/formation protein hupK|
          Length = 342

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +3

Query: 171 TLKPRLFLLPRAFSNFLPLERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGAR 350
           +++  L  L + +   +PLER   L+ LC    A  + LTA RA   P +  +   + A 
Sbjct: 89  SIRESLLRLVQVWELPVPLERLKALLALCRRAAARLQALTAFRAAPLPADAELEGTLAAL 148

Query: 351 RASWSKVRHSPPA 389
            A+W+ ++   PA
Sbjct: 149 AAAWADLQPPAPA 161

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>RL18E_THEAC (Q9HL06) 50S ribosomal protein L18e|
          Length = 120

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 20/74 (27%), Positives = 38/74 (51%)
 Frame = -1

Query: 535 LSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQL 356
           LS   K  ++ +I VV G +    +I +   + V A +F++TA  ++ N+G   +   ++
Sbjct: 49  LSKIDKYAKDGDIIVVPGYVLGVGKISK--KVTVGAYKFSKTAMEKLSNSGCAFMNISEI 106

Query: 355 ALRAPTGENTILLR 314
           A   P G N  ++R
Sbjct: 107 AKDNPKGTNVKIMR 120

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>BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6|
            (Ubiquitin-conjugating BIR-domain enzyme apollon)
          Length = 4829

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = -3

Query: 614  QEQVQRRHPQEALHEQDQPPAALHAPSLQL 525
            QEQ QRRHPQ  LH+Q    AA H  + +L
Sbjct: 1023 QEQQQRRHPQH-LHQQHHGDAAQHTRTWKL 1051

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>RL18E_PYRAE (Q8ZYQ2) 50S ribosomal protein L18e|
          Length = 122

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = -1

Query: 511 EEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTG 335
           +E ++ VV G +    ++ +   + V A++ +  A  +++ AGGE LT  +L  + P G
Sbjct: 59  KEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRG 115

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>NPDC1_MOUSE (Q64322) Neural proliferation differentiation and control protein 1|
           precursor (NPDC-1 protein)
          Length = 332

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/86 (27%), Positives = 32/86 (37%)
 Frame = +3

Query: 240 GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILALAVSV 419
           GL    GT   +P    +SRA  GP+      P G         RH      +L LA  +
Sbjct: 149 GLPSTHGTSSPIPHTSLSSRASSGPVQMSPLEPQG---------RHGNGLTLVLILAFCL 199

Query: 420 NLRAVTFIAGISWIRMSSVIVPTTTA 497
              A   +A + W R+   I  T  A
Sbjct: 200 ASSAALAVAALCWCRLQREIRLTQKA 225

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>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            4) (Histone acetyltransferase MOZ2) (Monocytic leukemia
            zinc finger protein-related factor) (Histone
            acetyltransferas
          Length = 2073

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 21/83 (25%), Positives = 35/83 (42%)
 Frame = +1

Query: 34   SKYHSNTGAIDCAALSTKYFTNYCQLLKQNNSRSTQTATNQKGQLKP*SHGCSSYHEPSQ 213
            S Y S  G   C   S++   +Y  L   + ++S+   T Q   +   S  CS   + S 
Sbjct: 1684 SSYDSTMGGSICGNGSSQNSCSYSNLTSSSLTQSSCAVTQQMSNI---SGSCSMLQQTSI 1740

Query: 214  TSYPWSAHRAWCGCAAHQEPCRS 282
            +S P  + ++  GC   + P  S
Sbjct: 1741 SSPPTCSVKSPQGCVVERPPSSS 1763

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>TIM50_YARLI (Q6CDV7) Import inner membrane translocase subunit TIM50,|
           mitochondrial precursor
          Length = 466

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 313 GPKNAREAVRHFGKAPGVPHSHTKP 239
           GPKN  EAV   G  P VP   T+P
Sbjct: 440 GPKNLSEAVSSIGSLPPVPQQPTEP 464

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>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 815

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
 Frame = +1

Query: 166 LKP*SHGCSSYHEPSQTSY---PWSAHRAWCGCAAHQEPCRSASPPHGHSWVPSTGSCSP 336
           + P S  C +      TS+   P +  R+WC      EPC             ST SC  
Sbjct: 644 MTPSSAACRTCWAACATSWCRTPSTTPRSWCSTPTRMEPCGRRCSTTPSCRRRSTWSCRL 703

Query: 337 QLEHGEQAGQ 366
             EH   AGQ
Sbjct: 704 CAEHLRGAGQ 713

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>PACC_GIBFU (Q8J1U9) pH-response transcription factor pacC/RIM101|
          Length = 618

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 250 GCAAHQEPCRSASPPHGHSWVPSTGSCSPQLEHGEQA 360
           G  A   P  S S   GHS  PS+ + SPQ  HG  A
Sbjct: 416 GTPAVTPPSSSMSYTSGHSPSPSSSAMSPQSRHGSTA 452

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>PACC_GIBMO (Q873X0) pH-response transcription factor pacC/RIM101|
          Length = 613

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 250 GCAAHQEPCRSASPPHGHSWVPSTGSCSPQLEHGEQA 360
           G  A   P  S S   GHS  PS+ + SPQ  HG  A
Sbjct: 411 GTPAVTPPSSSMSYTSGHSPSPSSSAMSPQSRHGSTA 447

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>PHYK_MAIZE (Q2N2K4) Probable phytol kinase, chloroplast precursor (EC 2.7.-.-)|
          Length = 303

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 229 SAHRAWCGCAAHQEPCRSASPPHGHSWVPSTGS 327
           +A  AW G A+      S SPPH  +  PS GS
Sbjct: 2   AAAAAWTGAASPNSLLLSRSPPHAAALAPSPGS 34

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>PHYK2_SOYBN (Q2N2K2) Probable phytol kinase 2, chloroplast precursor (EC|
           2.7.-.-)
          Length = 292

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 229 SAHRAWCGCAAHQEPCRSASPPHGHSWVPSTGS 327
           +A  AW G A+      S SPPH  +  PS GS
Sbjct: 2   AAAAAWTGAASPNSLLLSRSPPHAAALAPSPGS 34

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>PROB_STRAW (Q82C83) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 375

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 24/99 (24%), Positives = 40/99 (40%)
 Frame = -2

Query: 315 GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVASRFKLPFLVSRCLR 136
           GDP  P    GTS    V +   P  +    +GS  R  VG   + ++ +   + +    
Sbjct: 185 GDPSKP----GTSR---VAQVHGPQDLAHVEIGSAGRAGVGTGGMVTKIEAARIAAAA-- 235

Query: 135 GAAVVLFEQLTVISKVLSTESSTIYRPSVRMIFGRFLWL 19
           G  VVL   +     +   ++ T + P+ +    R LWL
Sbjct: 236 GIPVVLTSAVHAADALAGRDTGTYFHPTGKRSADRLLWL 274

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>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101|
          Length = 621

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +1

Query: 184 GCSSYHEPSQTSYPWSAHRAWC--GCAAHQEPCRSASPPHGHSWVPSTGSCSPQLEHGEQ 357
           G   YH+P   +   S   A    G  A   P  + S   GHS  PS  + SPQ  H   
Sbjct: 380 GPDGYHQPVSAATMASPLTAMSSTGTPAVTPPSSAVSYTSGHSPSPSAPAMSPQSRHSST 439

Query: 358 AG 363
           +G
Sbjct: 440 SG 441

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>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (DNup214)
          Length = 1711

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 24/87 (27%), Positives = 37/87 (42%)
 Frame = +3

Query: 258  GTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILALAVSVNLRAVT 437
            GT  A+PK   +S A          +P G   A+ +K  +S P  T+ +   ++  +   
Sbjct: 1108 GTAAAVPKSEPSSTATTSVATSASTAPFGIFSAALAKPSNSEPITTVTSNTTTITSKPTN 1167

Query: 438  FIAGISWIRMSSVIVPTTTAMFFSSFP 518
             IA  S     S  V TT A+  S+ P
Sbjct: 1168 VIASSSVTDAPS--VTTTNAVTSSTDP 1192

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>NRX3A_RAT (Q07310) Neurexin-3-alpha precursor (Neurexin III-alpha)|
          Length = 1578

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +2

Query: 344 STESKLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCA 484
           ++E +L+ S+++    + PC    CE  +G + C+ LLD H  CDC+
Sbjct: 183 NSEPRLLGSQSVQLEAEGPCGERPCE--NGGI-CF-LLDGHPTCDCS 225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,583,574
Number of Sequences: 219361
Number of extensions: 1786350
Number of successful extensions: 5989
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 5677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5963
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result