>gb|AY110961.1| Zea mays CL30408_1 mRNA sequence
          Length = 546

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                       
Query: 468 ggggacttgactctcttgcgtgcgaaacgtgcctccatctctggtctacggttgggacca 527
           ||||||||||||||||| || || || ||||||||||| ||||| || ||||||||||||
Sbjct: 440 ggggacttgactctcttccgagcaaagcgtgcctccatttctggcctccggttgggacca 499

                                                       
Query: 528 atcagttttacatggaatggattgacagctgtgtagcaaaccaa 571
           || ||  ||||||| ||||||||  | |||||||| || |||||
Sbjct: 500 ataagccttacatgaaatggattctctgctgtgtaacacaccaa 543

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Minus

                                                                            
Query: 267      agtcagtctgccattcatttgcatcagctggattccagattgaatggctgcagcagttga 326
                |||||||||||| | ||| | |||||||||||||| |||||||  ||  |||||| ||||
Sbjct: 19889289 agtcagtctgccctccatcttcatcagctggattctagattgatcgggcgcagcatttga 19889230

                                                                            
Query: 327      gcagactttcgccttcgctttccttcaggagtcaatctgactgatgccttaactgaaacc 386
                |  ||| | |||||||||||||| || ||||||| | | | ||| | ||| |||| ||||
Sbjct: 19889229 gttgacctccgccttcgctttccatctggagtcagtttaattgacgtcttcactggaacc 19889170

                            
Query: 387      ttgccattttta 398
                ||||||||||||
Sbjct: 19889169 ttgccattttta 19889158



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                            
Query: 474      ttgactctcttgcgtgcgaaacgtgcctccatctctggtctacggttgggaccaatcagt 533
                ||||| ||||| || |||||||||||||| || || |||||  ||||||||||||| || 
Sbjct: 19889085 ttgaccctctttcgcgcgaaacgtgcctcgatttccggtctctggttgggaccaatgagc 19889026

                              
Query: 534      tttacatggaatgg 547
                 |||||||||||||
Sbjct: 19889025 cttacatggaatgg 19889012

>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Minus

                                                                         
Query: 267   agtcagtctgccattcatttgcatcagctggattccagattgaatggctgcagcagttga 326
             |||||||||||| | ||| | |||||||||||||| |||||||  ||  |||||| ||||
Sbjct: 53939 agtcagtctgccctccatcttcatcagctggattctagattgatcgggcgcagcatttga 53880

                                                                         
Query: 327   gcagactttcgccttcgctttccttcaggagtcaatctgactgatgccttaactgaaacc 386
             |  ||| | |||||||||||||| || ||||||| | | | ||| | ||| |||| ||||
Sbjct: 53879 gttgacctccgccttcgctttccatctggagtcagtttaattgacgtcttcactggaacc 53820

                         
Query: 387   ttgccattttta 398
             ||||||||||||
Sbjct: 53819 ttgccattttta 53808



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                         
Query: 474   ttgactctcttgcgtgcgaaacgtgcctccatctctggtctacggttgggaccaatcagt 533
             ||||| ||||| || |||||||||||||| || || |||||  ||||||||||||| || 
Sbjct: 53735 ttgaccctctttcgcgcgaaacgtgcctcgatttccggtctctggttgggaccaatgagc 53676

                           
Query: 534   tttacatggaatgg 547
              |||||||||||||
Sbjct: 53675 cttacatggaatgg 53662

>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0650C03
          Length = 144337

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Minus

                                                                          
Query: 267    agtcagtctgccattcatttgcatcagctggattccagattgaatggctgcagcagttga 326
              |||||||||||| | ||| | |||||||||||||| |||||||  ||  |||||| ||||
Sbjct: 129448 agtcagtctgccctccatcttcatcagctggattctagattgatcgggcgcagcatttga 129389

                                                                          
Query: 327    gcagactttcgccttcgctttccttcaggagtcaatctgactgatgccttaactgaaacc 386
              |  ||| | |||||||||||||| || ||||||| | | | ||| | ||| |||| ||||
Sbjct: 129388 gttgacctccgccttcgctttccatctggagtcagtttaattgacgtcttcactggaacc 129329

                          
Query: 387    ttgccattttta 398
              ||||||||||||
Sbjct: 129328 ttgccattttta 129317



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                          
Query: 474    ttgactctcttgcgtgcgaaacgtgcctccatctctggtctacggttgggaccaatcagt 533
              ||||| ||||| || |||||||||||||| || || |||||  ||||||||||||| || 
Sbjct: 129244 ttgaccctctttcgcgcgaaacgtgcctcgatttccggtctctggttgggaccaatgagc 129185

                            
Query: 534    tttacatggaatgg 547
               |||||||||||||
Sbjct: 129184 cttacatggaatgg 129171

>dbj|AK121812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098C24, full
            insert sequence
          Length = 2185

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 107/132 (81%)
 Strand = Plus / Minus

                                                                        
Query: 267  agtcagtctgccattcatttgcatcagctggattccagattgaatggctgcagcagttga 326
            |||||||||||| | ||| | ||||||||| |||| |||||||  ||  |||||| ||||
Sbjct: 1926 agtcagtctgccctccatcttcatcagctgtattctagattgatcgggcgcagcatttga 1867

                                                                        
Query: 327  gcagactttcgccttcgctttccttcaggagtcaatctgactgatgccttaactgaaacc 386
            |  ||| | |||||||||||||| || ||||||| | | | ||| | ||| |||| ||||
Sbjct: 1866 gttgacctccgccttcgctttccatctggagtcagtttaattgacgtcttcactggaacc 1807

                        
Query: 387  ttgccattttta 398
            ||||||||||||
Sbjct: 1806 ttgccattttta 1795



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 474  ttgactctcttgcgtgcgaaacgtgcctccatctctggtctacggttgggaccaatcagt 533
            ||||| ||||| || |||||||||||||| || || |||||  ||||||||||||| || 
Sbjct: 1722 ttgaccctctttcgcgcgaaacgtgcctcgatttccggtctctggttgggaccaatgagc 1663

                          
Query: 534  tttacatggaatgg 547
             |||||||||||||
Sbjct: 1662 cttacatggaatgg 1649

>ref|XM_478424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2115

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 474  ttgactctcttgcgtgcgaaacgtgcctccatctctggtctacggttgggaccaatcagt 533
            ||||| ||||| || |||||||||||||| || || |||||  ||||||||||||| || 
Sbjct: 1934 ttgaccctctttcgcgcgaaacgtgcctcgatttccggtctctggttgggaccaatgagc 1875

                          
Query: 534  tttacatggaatgg 547
             |||||||||||||
Sbjct: 1874 cttacatggaatgg 1861



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Minus

                                                                        
Query: 290  tcagctggattccagattgaatggctgcagcagttgagcagactttcgccttcgctttcc 349
            |||||||||||| |||||||  ||  |||||| |||||  ||| | ||||||||||||||
Sbjct: 2115 tcagctggattctagattgatcgggcgcagcatttgagttgacctccgccttcgctttcc 2056

                                                             
Query: 350  ttcaggagtcaatctgactgatgccttaactgaaaccttgccattttta 398
             || ||||||| | | | ||| | ||| |||| ||||||||||||||||
Sbjct: 2055 atctggagtcagtttaattgacgtcttcactggaaccttgccattttta 2007

>gb|AC068655.3|AC068655 Genomic Sequence For Arabidopsis thaliana Clone F17K4 From Chromosome
             V, complete sequence
          Length = 89453

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 214   gagaaactcagcaatacaagag 235
             ||||||||||||||||||||||
Sbjct: 19864 gagaaactcagcaatacaagag 19885

>gb|AC104462.1| Homo sapiens chromosome 1 clone RP11-522M21, complete sequence
          Length = 183271

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 346   ttccttcaggagtcaatctga 366
             |||||||||||||||||||||
Sbjct: 58593 ttccttcaggagtcaatctga 58613

>gb|AC034194.5| Homo sapiens chromosome 3 clone RP11-669E3 map 3p, complete sequence
          Length = 179255

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 89     ttgtacatatacaccatctattact 113
              |||||||||||||||||||| ||||
Sbjct: 107089 ttgtacatatacaccatctaatact 107113

>gb|AF490259.2| Chikungunya virus strain Ross, complete genome
          Length = 11791

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  tttttaggtggctgcttctt 412
            ||||||||||||||||||||
Sbjct: 7835 tttttaggtggctgcttctt 7816

>gb|AC112663.9| Mus musculus chromosome 5, clone RP23-465J5, complete sequence
          Length = 228717

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 188    tcaacaacattgatcaggaaaagg 211
              |||||||||||||| |||||||||
Sbjct: 132390 tcaacaacattgataaggaaaagg 132413

>gb|AC004142.2| Homo sapiens BAC clone CTB-118D7 from 7, complete sequence
          Length = 166126

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    tcaattgtacatatacacca 104
             ||||||||||||||||||||
Sbjct: 85513 tcaattgtacatatacacca 85532

>emb|AL592049.3| Human DNA sequence from clone RP11-747I9 on chromosome Xq11.1-12
             Contains a novel pseudogene, complete sequence
          Length = 104353

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   actatcaacaacattgatca 203
             ||||||||||||||||||||
Sbjct: 12588 actatcaacaacattgatca 12607

>gb|AC165065.2| Phakopsora pachyrhizi clone JGIAFNA-309D18, complete sequence
          Length = 36367

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 455   acaacttctttgaggggacttgac 478
             ||||||| ||||||||||||||||
Sbjct: 18152 acaacttttttgaggggacttgac 18129

>emb|BX322660.9| Zebrafish DNA sequence from clone DKEYP-4C7 in linkage group 13, complete
              sequence
          Length = 173972

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 366    actgatgccttaactgaaaccttg 389
              ||||||||||||||||| ||||||
Sbjct: 126496 actgatgccttaactgacaccttg 126519

>gb|DQ443544.1| Chikungunya virus strain LR2006_OPY1, complete genome
          Length = 11763

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  tttttaggtggctgcttctt 412
            ||||||||||||||||||||
Sbjct: 7836 tttttaggtggctgcttctt 7817

>gb|DQ378282.1| Drosophila virilis strain Tucson 15010-1001.10 chromosome 4 fosmids
             15E14 and 12E24, complete sequence
          Length = 61074

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    aatatacatacataacagca 78
             ||||||||||||||||||||
Sbjct: 15652 aatatacatacataacagca 15633

>emb|BX855621.15| Zebrafish DNA sequence from clone CH211-225C13, complete sequence
          Length = 178447

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   gtctgccattcatttgcatc 291
             ||||||||||||||||||||
Sbjct: 33846 gtctgccattcatttgcatc 33827

>dbj|AB056416.1| Macaca fascicularis brain cDNA, clone:QflA-14362, similar to human
            hypothetical protein AF451991, AF451991
          Length = 2767

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 71   taacagcacaatgatcaattgtac 94
            ||||||||||||||| ||||||||
Sbjct: 2405 taacagcacaatgataaattgtac 2428

>gb|AF339485.1| Chikungunya virus strain S27 nonstructural protein 4 gene, partial
           cds; and structural polyprotein precursor, gene,
           complete cds
          Length = 4885

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 393 tttttaggtggctgcttctt 412
           ||||||||||||||||||||
Sbjct: 907 tttttaggtggctgcttctt 888

>gb|AF369024.2| Chikungunya virus strain S27-African prototype, complete genome
          Length = 11826

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  tttttaggtggctgcttctt 412
            ||||||||||||||||||||
Sbjct: 7835 tttttaggtggctgcttctt 7816

>gb|AC007067.4|AC007067 Genomic sequence for Arabidopsis thaliana BAC T10O24 from Chromosome 1,
             complete sequence
          Length = 89934

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   ttttaggtggctgcttctta 413
             ||||||||||||||||||||
Sbjct: 69692 ttttaggtggctgcttctta 69711

>dbj|AB110784.1| Vibrio mimicus matC, matD, matB, iucA, iucB, iucC, iucD, iutA genes
            and methyl accepting chemotaxis gene, complete cds
          Length = 13807

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 391  catttttaggtggctgcttc 410
            ||||||||||||||||||||
Sbjct: 2212 catttttaggtggctgcttc 2231

>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      catatacaccatctattact 113
               ||||||||||||||||||||
Sbjct: 1686113 catatacaccatctattact 1686094

>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      attgtacatatacaccatct 107
               ||||||||||||||||||||
Sbjct: 2392206 attgtacatatacaccatct 2392187

>gb|AC000114.1|HSAC000114 Human PAC clone DJ527C21 from Xq23, complete sequence
          Length = 172151

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    tttaaggtcagtcagtctgc 277
              ||||||||||||||||||||
Sbjct: 111008 tttaaggtcagtcagtctgc 110989

>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete
              sequence
          Length = 230186

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    catttttaggtggctgcttc 410
              ||||||||||||||||||||
Sbjct: 188831 catttttaggtggctgcttc 188850

>emb|AJ243681.1|GMA243681 Gigantolina magna 18S rRNA gene, partial
          Length = 2873

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  aggtggctgcttcttagagg 417
            ||||||||||||||||||||
Sbjct: 2453 aggtggctgcttcttagagg 2472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,715,159
Number of Sequences: 3902068
Number of extensions: 5715159
Number of successful extensions: 111530
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111388
Number of HSP's gapped (non-prelim): 142
length of query: 590
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 567
effective length of database: 17,143,297,704
effective search space: 9720249798168
effective search space used: 9720249798168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)