ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal6d17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2355 Score = 289 bits (146), Expect = 6e-75 Identities = 278/322 (86%) Strand = Plus / Minus Query: 284 tcccagccgtcagaaacttggcgaccttctcgacattgttcaagatgatcctgtcttcct 343 ||||||| |||| |||||| | |||||||| |||||||||||||||| ||||||||||| Sbjct: 2197 tcccagctgtcaaaaacttcacaaccttctcaacattgttcaagatgaccctgtcttcct 2138 Query: 344 ctgtgattgtaggaagcaatgctcccgacctcacaggaaccatgccgaaaaccgggacgg 403 |||||||||||||||||| ||||| | || ||||||||||||| |||||| ||| | Sbjct: 2137 ctgtgattgtaggaagcagtgctctagctctgacaggaaccatgctgaaaactggggtag 2078 Query: 404 gatttctgaccccaaaagatgaagcaatttgtagcaattgctcccttgaaaccgcgtcga 463 ||||| | ||||||||||| ||||||||||| || ||||||||||||||| || || | Sbjct: 2077 catttcctagcccaaaagatgcagcaatttgtatcagttgctcccttgaaactgcatcta 2018 Query: 464 tggctttcacaatctcatcaagaatgaactcccggaagaagtcacccctgtcagagagta 523 ||||||| ||||||||||||||||||||||||| || ||||| ||||| |||||||||| Sbjct: 2017 tggctttgacaatctcatcaagaatgaactccctaaaaaagtcgcccctctcagagagta 1958 Query: 524 gaaaagagagagcagcccgagctttgattggattttcaggttgggaaatggccattggga 583 ||||||| ||||||||||||||||||| ||| | ||||| || || ||||||||||| | Sbjct: 1957 gaaaagaaagagcagcccgagctttgactggttgctcaggctgtgatatggccattggaa 1898 Query: 584 atgcaggaactaaactggtgct 605 |||||||||||||||| ||||| Sbjct: 1897 atgcaggaactaaacttgtgct 1876 Score = 131 bits (66), Expect = 3e-27 Identities = 120/138 (86%) Strand = Plus / Minus Query: 126 tcacaaaaatgcttcccggatcacccgtgcgaatacccgtgatgacaaccggctcaagac 185 |||||||||||| |||||||||| |||||| ||||| || |||||||||||||||| ||| Sbjct: 2355 tcacaaaaatgcctcccggatcaaccgtgcaaatactcgcgatgacaaccggctcatgac 2296 Query: 186 atctggtaggatcttcgatgagatgcttggtagcacaggtaaaagctcttgcaccagaga 245 ||||||||||||||||| || ||||| || | |||||||| ||||||||| || ||| | Sbjct: 2295 ctctggtaggatcttcgacgaaatgctcggcaacacaggtagaagctcttgtacaagata 2236 Query: 246 cacgacatttacgtcccc 263 ||| |||||||| ||||| Sbjct: 2235 cacaacatttacatcccc 2218
>dbj|AK058624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C01, full insert sequence Length = 1203 Score = 289 bits (146), Expect = 6e-75 Identities = 278/322 (86%) Strand = Plus / Minus Query: 284 tcccagccgtcagaaacttggcgaccttctcgacattgttcaagatgatcctgtcttcct 343 ||||||| |||| |||||| | |||||||| |||||||||||||||| ||||||||||| Sbjct: 718 tcccagctgtcaaaaacttcacaaccttctcaacattgttcaagatgaccctgtcttcct 659 Query: 344 ctgtgattgtaggaagcaatgctcccgacctcacaggaaccatgccgaaaaccgggacgg 403 |||||||||||||||||| ||||| | || ||||||||||||| |||||| ||| | Sbjct: 658 ctgtgattgtaggaagcagtgctctagctctgacaggaaccatgctgaaaactggggtag 599 Query: 404 gatttctgaccccaaaagatgaagcaatttgtagcaattgctcccttgaaaccgcgtcga 463 ||||| | ||||||||||| ||||||||||| || ||||||||||||||| || || | Sbjct: 598 catttcctagcccaaaagatgcagcaatttgtatcagttgctcccttgaaactgcatcta 539 Query: 464 tggctttcacaatctcatcaagaatgaactcccggaagaagtcacccctgtcagagagta 523 ||||||| ||||||||||||||||||||||||| || ||||| ||||| |||||||||| Sbjct: 538 tggctttgacaatctcatcaagaatgaactccctaaaaaagtcgcccctctcagagagta 479 Query: 524 gaaaagagagagcagcccgagctttgattggattttcaggttgggaaatggccattggga 583 ||||||| ||||||||||||||||||| ||| | ||||| || || ||||||||||| | Sbjct: 478 gaaaagaaagagcagcccgagctttgactggttgctcaggctgtgatatggccattggaa 419 Query: 584 atgcaggaactaaactggtgct 605 |||||||||||||||| ||||| Sbjct: 418 atgcaggaactaaacttgtgct 397 Score = 143 bits (72), Expect = 8e-31 Identities = 126/144 (87%) Strand = Plus / Minus Query: 120 atcacttcacaaaaatgcttcccggatcacccgtgcgaatacccgtgatgacaaccggct 179 |||||||||||||||||| |||||||||| |||||| ||||| || |||||||||||||| Sbjct: 882 atcacttcacaaaaatgcctcccggatcaaccgtgcaaatactcgcgatgacaaccggct 823 Query: 180 caagacatctggtaggatcttcgatgagatgcttggtagcacaggtaaaagctcttgcac 239 || ||| ||||||||||||||||| || ||||| || | |||||||| ||||||||| || Sbjct: 822 catgacctctggtaggatcttcgacgaaatgctcggcaacacaggtagaagctcttgtac 763 Query: 240 cagagacacgacatttacgtcccc 263 ||| |||| |||||||| ||||| Sbjct: 762 aagatacacaacatttacatcccc 739
>dbj|AK071389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091P22, full insert sequence Length = 895 Score = 281 bits (142), Expect = 1e-72 Identities = 277/322 (86%) Strand = Plus / Minus Query: 284 tcccagccgtcagaaacttggcgaccttctcgacattgttcaagatgatcctgtcttcct 343 ||||||| |||| |||||| | |||||||| |||||||||||||||| ||||||||||| Sbjct: 575 tcccagctgtcaaaaacttcacaaccttctcaacattgttcaagatgaccctgtcttcct 516 Query: 344 ctgtgattgtaggaagcaatgctcccgacctcacaggaaccatgccgaaaaccgggacgg 403 |||||||||||||||||| ||||| | || ||||||||||||| |||||| ||| | Sbjct: 515 ctgtgattgtaggaagcagtgctctagctctgacaggaaccatgctgaaaactggggtag 456 Query: 404 gatttctgaccccaaaagatgaagcaatttgtagcaattgctcccttgaaaccgcgtcga 463 ||||| | ||||||||||| ||||||||||| || ||||||||||||||| || || | Sbjct: 455 catttcctagcccaaaagatgcagcaatttgtatcagttgctcccttgaaactgcatcta 396 Query: 464 tggctttcacaatctcatcaagaatgaactcccggaagaagtcacccctgtcagagagta 523 ||||||| ||||||||||||||||||||||||| || |||| ||||| |||||||||| Sbjct: 395 tggctttgacaatctcatcaagaatgaactccctaaaaaagttgcccctctcagagagta 336 Query: 524 gaaaagagagagcagcccgagctttgattggattttcaggttgggaaatggccattggga 583 ||||||| ||||||||||||||||||| ||| | ||||| || || ||||||||||| | Sbjct: 335 gaaaagaaagagcagcccgagctttgactggttgctcaggctgtgatatggccattggaa 276 Query: 584 atgcaggaactaaactggtgct 605 |||||||||||||||| ||||| Sbjct: 275 atgcaggaactaaacttgtgct 254 Score = 135 bits (68), Expect = 2e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 120 atcacttcacaaaaatgcttcccggatcacccgtgcgaatacccgtgatgacaaccggct 179 |||||||||||||||||| ||||||| || |||||| ||||| || |||||||||||||| Sbjct: 739 atcacttcacaaaaatgcctcccggaccaaccgtgcaaatactcgcgatgacaaccggct 680 Query: 180 caagacatctggtaggatcttcgatgagatgcttggtagcacaggtaaaagctcttgcac 239 || ||| ||||||||||||||||| || ||||| || | |||||||| ||||||||| || Sbjct: 679 catgacctctggtaggatcttcgacgaaatgctcggcaacacaggtagaagctcttgtac 620 Query: 240 cagagacacgacatttacgtcccc 263 ||| |||| |||||||| ||||| Sbjct: 619 aagatacacaacatttacatcccc 596
>gb|AY112358.1| Zea mays CL26230_1 mRNA sequence Length = 580 Score = 194 bits (98), Expect = 3e-46 Identities = 212/250 (84%) Strand = Plus / Plus Query: 139 tcccggatcacccgtgcgaatacccgtgatgacaaccggctcaagacatctggtaggatc 198 |||||||| | |||||| ||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 145 tcccggattatccgtgcaaatacccgtgacgacaaccggctcaagacatcaggtaggatc 204 Query: 199 ttcgatgagatgcttggtagcacaggtaaaagctcttgcaccagagacacgacatttacg 258 ||||| ||||||| ||| | |||||||| |||||||||||||| |||||| || || ||| Sbjct: 205 ttcgacgagatgcctggcaacacaggtagaagctcttgcaccacagacaccacgttcacg 264 Query: 259 tccccgttgactgtttgatttgccgtcccagccgtcagaaacttggcgaccttctcgaca 318 |||||| |||||| || |||| ||||| | ||||| ||||| | ||||||||||| Sbjct: 265 tccccgcccactgttggagttgcagtcccggatgtcaggaacttcacaaccttctcgacg 324 Query: 319 ttgttcaagatgatcctgtcttcctctgtgattgtaggaagcaatgctcccgacctcaca 378 ||||||| ||||| |||||||||||||| ||| || ||||||||||| | | ||| ||| Sbjct: 325 ttgttcaggatgaccctgtcttcctctgggatcgtcggaagcaatgccctggccctgaca 384 Query: 379 ggaaccatgc 388 |||||||||| Sbjct: 385 ggaaccatgc 394 Score = 89.7 bits (45), Expect = 1e-14 Identities = 76/88 (86%) Strand = Plus / Plus Query: 442 tgctcccttgaaaccgcgtcgatggctttcacaatctcatcaagaatgaactcccggaag 501 ||||||||||||| ||| |||||||||||||||||||| |||||||| |||||||| ||| Sbjct: 448 tgctcccttgaaatcgcatcgatggctttcacaatctcgtcaagaataaactcccgaaag 507 Query: 502 aagtcacccctgtcagagagtagaaaag 529 |||| | |||||||||||||||| Sbjct: 508 aagttnnnnntctcagagagtagaaaag 535
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 157 bits (79), Expect = 5e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 284 tcccagccgtcagaaacttggcgaccttctcgacattgttcaagatgatcctgtcttcct 343 ||||||| |||| |||||| | |||||||| |||||||||||||||| ||||||||||| Sbjct: 35024025 tcccagctgtcaaaaacttcacaaccttctcaacattgttcaagatgaccctgtcttcct 35024084 Query: 344 ctgtgattgtaggaagcaatgctcccgacctcacaggaaccatgccgaaaaccgggacgg 403 |||||||||||||||||| ||||| | || ||||||||||||| |||||| ||| | Sbjct: 35024085 ctgtgattgtaggaagcagtgctctagctctgacaggaaccatgctgaaaactggggtag 35024144 Query: 404 gatttctgaccccaaaagatgaagcaatttgtagcaattgctcccttgaaaccgcgtcga 463 ||||| | ||||||||||| ||||||||||| || ||||||||||||||| || || | Sbjct: 35024145 catttcctagcccaaaagatgcagcaatttgtatcagttgctcccttgaaactgcatcta 35024204 Query: 464 tggctttcacaatct 478 ||||||| ||||||| Sbjct: 35024205 tggctttgacaatct 35024219 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 120 atcacttcacaaaaatgcttcccggatcacccgtgcgaatacccgtgatgacaaccggct 179 |||||||||||||||||| |||||||||| |||||| ||||| || |||||||||||||| Sbjct: 35023728 atcacttcacaaaaatgcctcccggatcaaccgtgcaaatactcgcgatgacaaccggct 35023787 Query: 180 caagacatctggtaggatcttcgatgagatgcttggtagcacaggtaaaagctcttgcac 239 || ||| ||||||||||||||||| || ||||| || | |||||||| ||||||||| || Sbjct: 35023788 catgacctctggtaggatcttcgacgaaatgctcggcaacacaggtagaagctcttgtac 35023847 Query: 240 cagagacacgacatttac 257 ||| |||| |||||||| Sbjct: 35023848 aagatacacaacatttac 35023865 Score = 137 bits (69), Expect = 5e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 477 ctcatcaagaatgaactcccggaagaagtcacccctgtcagagagtagaaaagagagagc 536 |||||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||| Sbjct: 35024349 ctcatcaagaatgaactccctaaaaaagtcgcccctctcagagagtagaaaagaaagagc 35024408 Query: 537 agcccgagctttgattggattttcaggttgggaaatggccattgggaatgcaggaactaa 596 |||||||||||||| ||| | ||||| || || ||||||||||| |||||||||||||| Sbjct: 35024409 agcccgagctttgactggttgctcaggctgtgatatggccattggaaatgcaggaactaa 35024468 Query: 597 actggtgct 605 ||| ||||| Sbjct: 35024469 acttgtgct 35024477
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 157 bits (79), Expect = 5e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 284 tcccagccgtcagaaacttggcgaccttctcgacattgttcaagatgatcctgtcttcct 343 ||||||| |||| |||||| | |||||||| |||||||||||||||| ||||||||||| Sbjct: 84366 tcccagctgtcaaaaacttcacaaccttctcaacattgttcaagatgaccctgtcttcct 84425 Query: 344 ctgtgattgtaggaagcaatgctcccgacctcacaggaaccatgccgaaaaccgggacgg 403 |||||||||||||||||| ||||| | || ||||||||||||| |||||| ||| | Sbjct: 84426 ctgtgattgtaggaagcagtgctctagctctgacaggaaccatgctgaaaactggggtag 84485 Query: 404 gatttctgaccccaaaagatgaagcaatttgtagcaattgctcccttgaaaccgcgtcga 463 ||||| | ||||||||||| ||||||||||| || ||||||||||||||| || || | Sbjct: 84486 catttcctagcccaaaagatgcagcaatttgtatcagttgctcccttgaaactgcatcta 84545 Query: 464 tggctttcacaatct 478 ||||||| ||||||| Sbjct: 84546 tggctttgacaatct 84560 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 120 atcacttcacaaaaatgcttcccggatcacccgtgcgaatacccgtgatgacaaccggct 179 |||||||||||||||||| |||||||||| |||||| ||||| || |||||||||||||| Sbjct: 84069 atcacttcacaaaaatgcctcccggatcaaccgtgcaaatactcgcgatgacaaccggct 84128 Query: 180 caagacatctggtaggatcttcgatgagatgcttggtagcacaggtaaaagctcttgcac 239 || ||| ||||||||||||||||| || ||||| || | |||||||| ||||||||| || Sbjct: 84129 catgacctctggtaggatcttcgacgaaatgctcggcaacacaggtagaagctcttgtac 84188 Query: 240 cagagacacgacatttac 257 ||| |||| |||||||| Sbjct: 84189 aagatacacaacatttac 84206 Score = 137 bits (69), Expect = 5e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 477 ctcatcaagaatgaactcccggaagaagtcacccctgtcagagagtagaaaagagagagc 536 |||||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||| Sbjct: 84690 ctcatcaagaatgaactccctaaaaaagtcgcccctctcagagagtagaaaagaaagagc 84749 Query: 537 agcccgagctttgattggattttcaggttgggaaatggccattgggaatgcaggaactaa 596 |||||||||||||| ||| | ||||| || || ||||||||||| |||||||||||||| Sbjct: 84750 agcccgagctttgactggttgctcaggctgtgatatggccattggaaatgcaggaactaa 84809 Query: 597 actggtgct 605 ||| ||||| Sbjct: 84810 acttgtgct 84818
>gb|AC160552.13| Mus musculus chromosome 3, clone RP23-326D6, complete sequence Length = 210051 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 623 cacccagctctgccatgtttcc 644 |||||||||||||||||||||| Sbjct: 121380 cacccagctctgccatgtttcc 121401
>gb|AC135161.11| Medicago truncatula clone mth2-30k24, complete sequence Length = 88701 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 213 tggtagcacaggtaaaagctct 234 |||||||||||||||||||||| Sbjct: 71224 tggtagcacaggtaaaagctct 71203
>gb|AC010221.8| Homo sapiens chromosome 5 clone CTC-262J4, complete sequence Length = 101937 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 408 tctgaccccaaaagatgaagca 429 |||||||||||||||||||||| Sbjct: 66996 tctgaccccaaaagatgaagca 66975
>gb|AC026783.5| Homo sapiens chromosome 5 clone CTD-2129A22, complete sequence Length = 200232 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 408 tctgaccccaaaagatgaagca 429 |||||||||||||||||||||| Sbjct: 10391 tctgaccccaaaagatgaagca 10412
>gb|AC139572.4| Mus musculus BAC clone RP24-196P9 from chromosome 7, complete sequence Length = 165198 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cagaaggaaaacaaaactgag 119 ||||||||||||||||||||| Sbjct: 75277 cagaaggaaaacaaaactgag 75297
>gb|AC132424.3| Mus musculus BAC clone RP23-310P13 from chromosome 15, complete sequence Length = 199655 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 gtgtatgtgtgtgtagtttgtataa 63 |||||||||||||| |||||||||| Sbjct: 156859 gtgtatgtgtgtgttgtttgtataa 156835
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 aaaaggaaaaaggagaaataa 82 ||||||||||||||||||||| Sbjct: 18352 aaaaggaaaaaggagaaataa 18332
>gb|AC124418.4| Mus musculus BAC clone RP24-318G17 from chromosome 18, complete sequence Length = 167998 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tagtttgtataaaaggaaaaa 72 ||||||||||||||||||||| Sbjct: 152043 tagtttgtataaaaggaaaaa 152023
>gb|AC122330.4| Mus musculus BAC clone RP23-342G7 from chromosome 18, complete sequence Length = 194291 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tagtttgtataaaaggaaaaa 72 ||||||||||||||||||||| Sbjct: 107480 tagtttgtataaaaggaaaaa 107460
>emb|BX784395.1| Human DNA sequence from clone RP5-1190M18 on chromosome 1 Contains part of the VPS13D gene for vacuolar protein sorting 13D (yeast), complete sequence Length = 4359 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gtagcaattgctcccttgaaa 454 ||||||||||||||||||||| Sbjct: 3263 gtagcaattgctcccttgaaa 3283
>emb|BX682532.4| Human DNA sequence from clone WI2-801539E12 on chromosome 1 Contains part of the VPS13D gene for vacuolar protein sorting 13D (yeast), complete sequence Length = 41821 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gtagcaattgctcccttgaaa 454 ||||||||||||||||||||| Sbjct: 904 gtagcaattgctcccttgaaa 924
>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a novel gene, complete sequence Length = 203279 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 gtgtatgtgtgtgtagtttgt 59 ||||||||||||||||||||| Sbjct: 81133 gtgtatgtgtgtgtagtttgt 81153
>emb|AL078597.11|HSDJ442I1 Human DNA sequence from clone RP3-442I1 on chromosome 6q12-13 Contains the 5' end of a novel gene, complete sequence Length = 138209 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 aaaggagaaataagtctctaa 90 ||||||||||||||||||||| Sbjct: 98143 aaaggagaaataagtctctaa 98163
>gb|AC106716.3| Homo sapiens 3 BAC RP11-202P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152883 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tataaaaggaaaaaggagaaa 79 ||||||||||||||||||||| Sbjct: 67292 tataaaaggaaaaaggagaaa 67272
>gb|AC117424.6| Homo sapiens 3 BAC RP11-172I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136511 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 tataaaaggaaaaaggagaaa 79 ||||||||||||||||||||| Sbjct: 135352 tataaaaggaaaaaggagaaa 135372
>gb|AC009300.2| Homo sapiens BAC clone RP11-52A21 from 2, complete sequence Length = 109939 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 aaaaggaaaaaggagaaataa 82 ||||||||||||||||||||| Sbjct: 37794 aaaaggaaaaaggagaaataa 37774
>emb|X54399.1|RDU6RNA R.dacryoidum intron from U6 small nuclear RNA gene Length = 186 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 atgctcccgacctcacaggaa 382 ||||||||||||||||||||| Sbjct: 117 atgctcccgacctcacaggaa 137
>gb|AC132374.4| Mus musculus BAC clone RP24-69E21 from 10, complete sequence Length = 188514 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 gtgtatgtgtgtgtagtttgt 59 ||||||||||||||||||||| Sbjct: 105080 gtgtatgtgtgtgtagtttgt 105060
>emb|AL445229.12| Human DNA sequence from clone RP5-1190M18 on chromosome 1, complete sequence Length = 32458 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gtagcaattgctcccttgaaa 454 ||||||||||||||||||||| Sbjct: 3263 gtagcaattgctcccttgaaa 3283
>emb|AL592545.10| Mouse DNA sequence from clone RP23-374H24 on chromosome 11, complete sequence Length = 142565 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 aaaaggagaaataagtctcta 89 ||||||||||||||||||||| Sbjct: 139298 aaaaggagaaataagtctcta 139318
>gb|AC101722.14| Mus musculus chromosome 5, clone RP23-310L24, complete sequence Length = 172370 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tgccgaaaaccgggacggga 405 |||||||||||||||||||| Sbjct: 108000 tgccgaaaaccgggacggga 108019
>gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosome 16, complete sequence Length = 197843 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tgtatgtgtgtgtagtttgt 59 |||||||||||||||||||| Sbjct: 69357 tgtatgtgtgtgtagtttgt 69376
>ref|NG_002392.2| Homo sapiens major histocompatibility complex, class II, DR52 haplotype (DR52) on chromosome 6 Length = 139182 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ataaaaggaaaaaggagaaa 79 |||||||||||||||||||| Sbjct: 89906 ataaaaggaaaaaggagaaa 89887
>ref|NG_002432.1| Homo sapiens major histocompatibility complex, class II, DR51 haplotype (DR51) on chromosome 6 Length = 137374 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ataaaaggaaaaaggagaaa 79 |||||||||||||||||||| Sbjct: 89568 ataaaaggaaaaaggagaaa 89549
>gb|AC103632.8| Mus musculus chromosome 1, clone RP24-555D5, complete sequence Length = 177269 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaggaaaacaaaactgagat 121 |||||||||||||||||||| Sbjct: 71229 aaggaaaacaaaactgagat 71210
>gb|AF125313.2| Mus musculus chromosome X clones CT7-508o14, CT7-549H18, CT7-552o8, proximal part, complete sequence Length = 107641 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tggctttcacaatctcatca 483 |||||||||||||||||||| Sbjct: 83243 tggctttcacaatctcatca 83262
>ref|NM_001001182.2| Mus musculus bromodomain adjacent to zinc finger domain, 2B (Baz2b), mRNA Length = 8012 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ttgtataaaaggaaaaaggagaaa 79 |||| ||||||||||||||||||| Sbjct: 6733 ttgtttaaaaggaaaaaggagaaa 6710
>gb|AC135509.2| Mus musculus BAC clone RP24-448I12 from chromosome 17, complete sequence Length = 141307 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 gtgtatgtgtgtgtagtttgtata 62 ||||||||||||||||| |||||| Sbjct: 34020 gtgtatgtgtgtgtagtgtgtata 34043
>ref|XM_654351.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1839.2), mRNA Length = 882 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 565 tgggaaatggccattgggaa 584 |||||||||||||||||||| Sbjct: 373 tgggaaatggccattgggaa 392
>gb|AC117702.10| Mus musculus chromosome 10, clone RP23-464I2, complete sequence Length = 147559 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 gtgtatgtgtgtgtagtttgtata 62 |||| ||||||||||||||||||| Sbjct: 126316 gtgtgtgtgtgtgtagtttgtata 126293
>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence Length = 205173 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 cacccagctctgccatgttt 642 |||||||||||||||||||| Sbjct: 109233 cacccagctctgccatgttt 109252
>gb|AC115805.12| Mus musculus chromosome 10, clone RP23-412P24, complete sequence Length = 193434 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 gtgtatgtgtgtgtagtttgtata 62 |||| ||||||||||||||||||| Sbjct: 21266 gtgtgtgtgtgtgtagtttgtata 21243
>gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosome 1, complete sequence Length = 167597 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 aaggaaaacaaaactgagat 121 |||||||||||||||||||| Sbjct: 27398 aaggaaaacaaaactgagat 27417
>gb|AC122373.4| Mus musculus BAC clone RP23-464E7 from chromosome 13, complete sequence Length = 192969 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 agaaggaaaacaaaactgagatca 123 ||||| |||||||||||||||||| Sbjct: 178615 agaagcaaaacaaaactgagatca 178592
>gb|AC117210.3| Mus musculus BAC clone RP23-286E20 from 10, complete sequence Length = 178173 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 gtgtatgtgtgtgtagtttgtata 62 |||| ||||||||||||||||||| Sbjct: 140338 gtgtctgtgtgtgtagtttgtata 140315
>gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, complete sequence Length = 230940 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 agaaggaaaacaaaactgagatca 123 ||||| |||||||||||||||||| Sbjct: 222204 agaagcaaaacaaaactgagatca 222227
>ref|XM_645641.1| Entamoeba histolytica HM-1:IMSS V-type ATPase, D subunit, putative (202.t00016) partial mRNA Length = 762 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tttcacaatctcatcaagaa 487 |||||||||||||||||||| Sbjct: 323 tttcacaatctcatcaagaa 342
>ref|XM_646506.1| Entamoeba histolytica HM-1:IMSS V-type ATPase, D subunit, putative (156.t00014) partial mRNA Length = 762 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tttcacaatctcatcaagaa 487 |||||||||||||||||||| Sbjct: 323 tttcacaatctcatcaagaa 342
>gb|AC119851.9| Mus musculus chromosome 7, clone RP23-106N20, complete sequence Length = 226307 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tctaatttcctgtcagaagg 105 |||||||||||||||||||| Sbjct: 189839 tctaatttcctgtcagaagg 189820
>gb|AC097752.7| Rattus norvegicus 1 BAC CH230-75H6 (Children's Hospital Oakland Research Institute) complete sequence Length = 245907 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 tatgtgtgtgtagtttgtataaaa 65 |||||||||||||||||| ||||| Sbjct: 150814 tatgtgtgtgtagtttgtttaaaa 150837
>emb|Z84814.1|HS172K2 Human DNA sequence from clone RP1-172K2 on chromosome 6p21.1-21.3 Contains the HLA-DRB3, HLA-DRB9 and HLA-DRA genes for major histocompatibility complex class II DR beta 3*01012, beta 9 (pseudogene) and alpha and the 5' end of the BTNL2 gene encoding MHC class II associated butyrophilin-like 2. Contains a CpG island, ESTs, STSs and GSSs, complete sequence Length = 131234 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ataaaaggaaaaaggagaaa 79 |||||||||||||||||||| Sbjct: 9559 ataaaaggaaaaaggagaaa 9578
>emb|BX120007.9| Human DNA sequence from clone DASS-397D15 on chromosome 6, complete sequence Length = 109682 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ataaaaggaaaaaggagaaa 79 |||||||||||||||||||| Sbjct: 91321 ataaaaggaaaaaggagaaa 91302
>emb|AL929581.5| Human DNA sequence from clone DAQB-97F8 on chromosome 6 Contains the 5' end of the HLA-DRB9 pseudogene for major histocompatibility complex, class II, DR beta 9, the HLA-DRB3 gene for major histocompatibility complex, class II DR beta 3, the HLA-DRB2 pseudogene for major histocompatibility complex, class II, DR beta 2, the HLA-DRB1 gene for major histocompatibility complex, class II, DR beta 1and one CpG island, complete sequence Length = 118771 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ataaaaggaaaaaggagaaa 79 |||||||||||||||||||| Sbjct: 52423 ataaaaggaaaaaggagaaa 52404
>emb|AL713966.7| Human DNA sequence from clone XXbac-161M6 on chromosome 6 contains the HLA-DRB5 gene for major histocompatibility complex, class II, DR beta 5, the HLA-DRB6 pseudogene for major histocompatibility complex, class II, DR beta 6, the HLA-DRB1 gene for major histocompatibility complex, class II, DR beta 1 and one CpG island, complete sequence Length = 124047 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ataaaaggaaaaaggagaaa 79 |||||||||||||||||||| Sbjct: 76241 ataaaaggaaaaaggagaaa 76222
>emb|AL662842.3| Human DNA sequence from clone XXbac-181I15 on chromosome 6 contains the HLA-DRB3 gene for major histocompatibility complex, class II, DR beta 3, a major histocompatibility complex, class II, DR beta pseudogene, the HLA-DRB1 gene for major histocompatibility complex, class II, DR beta 1 and one CpG island, complete sequence Length = 130819 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ataaaaggaaaaaggagaaa 79 |||||||||||||||||||| Sbjct: 41757 ataaaaggaaaaaggagaaa 41738
>emb|AL136219.17| Human DNA sequence from clone RP11-149B7 on chromosome 13 Contains a glyceraldehyde-3-phosphate dehydrogenase (GAPD)(GAPDH) pseudogene, 2 novel genes, a H2B histone family, member H (H2BFH)(H2B.h, H2B/h, dJ221C16.8) pseudogene, the 3' end of the EFHA1 gene for EF hand domain family, member A1 and three CpG islands, complete sequence Length = 167830 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 taaaaggaaaaaggagaaat 80 |||||||||||||||||||| Sbjct: 20729 taaaaggaaaaaggagaaat 20748
>emb|AL080239.12|HSG256O22 Human DNA sequence from clone GS1-256O22 on chromosome Xq26.3-28 Contains a novel pseudogene, the DKFZp547M2010 gene, a heterogeneous nuclear ribonucleoprotein H pseudogene, a novel gene and a CpG island, complete sequence Length = 216215 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 agtctctaatttcctgtcag 101 |||||||||||||||||||| Sbjct: 121883 agtctctaatttcctgtcag 121902
>emb|X15378.1|MMPO Mouse gene for the light and heavy chains of myeloperoxidase Length = 11913 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 gtgtatgtgtgtgtagtttgtata 62 ||||||||||||||||| |||||| Sbjct: 6476 gtgtatgtgtgtgtagtatgtata 6499
>gb|AC155332.10| Mus musculus 6 BAC RP24-140J8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202181 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aaaaggaaaaaggagaaata 81 |||||||||||||||||||| Sbjct: 201203 aaaaggaaaaaggagaaata 201222
>emb|AL627222.10| Mouse DNA sequence from clone RP23-265A5 on chromosome 11 Contains a novel gene, the Tac4 gene for tachykinin, the Myst2 gene for MYST histone acetyltransferase 2, two novel genes, the 5' end of the gene for the likely ortholog of H. sapiens C/EBP-induced protein (5730593F17Rik) and a CpG island, complete sequence Length = 185645 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 610 tggaatcctatagcacccag 629 |||||||||||||||||||| Sbjct: 132054 tggaatcctatagcacccag 132073
>gb|AC008021.10| Homo sapiens chromosome 18, clone RP11-504H5, complete sequence Length = 169439 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gtgattgtaggaagcaatgc 365 |||||||||||||||||||| Sbjct: 12245 gtgattgtaggaagcaatgc 12264
>emb|BX927235.7| Human DNA sequence from clone DAMA-25D9 on chromosome 6, complete sequence Length = 99242 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ataaaaggaaaaaggagaaa 79 |||||||||||||||||||| Sbjct: 41719 ataaaaggaaaaaggagaaa 41700
>emb|AL929409.5| Mouse DNA sequence from clone RP23-402H11 on chromosome 4 Contains the 3' end of the Cdk5rap2 gene for CDK5 regulatory subunit associated protein 2 and the gene for a novel protein identical to tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta Ywhaq, complete sequence Length = 147628 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aaaggaaaaaggagaaataa 82 |||||||||||||||||||| Sbjct: 136437 aaaggaaaaaggagaaataa 136456
>emb|BX323887.10| Zebrafish DNA sequence from clone CH211-274C22 in linkage group 13, complete sequence Length = 134841 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 gtgtatgtgtgtgtagtttgtata 62 |||| ||||||||||||||||||| Sbjct: 125321 gtgtgtgtgtgtgtagtttgtata 125298
>gb|AC154492.2| Mus musculus BAC clone RP24-107B10 from chromosome 17, complete sequence Length = 172605 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 tcctgtcagaaggaaaacaaaact 116 ||||| |||||||||||||||||| Sbjct: 61433 tcctgacagaaggaaaacaaaact 61456
>emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in linkage group 8, complete sequence Length = 218866 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ctgtcagaaggaaaacaaaa 114 |||||||||||||||||||| Sbjct: 68317 ctgtcagaaggaaaacaaaa 68298
>gb|AC090398.12| Homo sapiens chromosome 18, clone RP11-669I1, complete sequence Length = 133378 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gtgattgtaggaagcaatgc 365 |||||||||||||||||||| Sbjct: 49883 gtgattgtaggaagcaatgc 49902
>gb|AY282416.1| Homo sapiens Toll-interleukin 1 receptor (TIR) domain-containing adapter protein (TIRAP) gene, complete cds Length = 20684 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tttgtataaaaggaaaaagg 74 |||||||||||||||||||| Sbjct: 3100 tttgtataaaaggaaaaagg 3119
>gb|AC158672.6| Mus musculus 6 BAC RP23-64J23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216954 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aaaaggaaaaaggagaaata 81 |||||||||||||||||||| Sbjct: 95218 aaaaggaaaaaggagaaata 95237
>gb|AC134333.3| Mus musculus BAC clone RP24-140M19 from chromosome 10, complete sequence Length = 137079 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 gtgtatgtgtgtgtagtttgtata 62 |||| ||||||||||||||||||| Sbjct: 7963 gtgtctgtgtgtgtagtttgtata 7940
>gb|AC154691.3| Mus musculus BAC clone RP24-336F24 from chromosome 16, complete sequence Length = 178904 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tatgtgtgtgtagtttgtat 61 |||||||||||||||||||| Sbjct: 42058 tatgtgtgtgtagtttgtat 42039
>dbj|AK051966.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230026C07 product:hypothetical protein, full insert sequence Length = 2756 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 gtgtatgtgtgtgtagtttgtata 62 ||||||||||||||||| |||||| Sbjct: 1714 gtgtatgtgtgtgtagtgtgtata 1691
>gb|AC156284.8| Mus musculus 6 BAC RP24-392D13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 182146 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aaaaggaaaaaggagaaata 81 |||||||||||||||||||| Sbjct: 58467 aaaaggaaaaaggagaaata 58486
>emb|BX511165.4| Zebrafish DNA sequence from clone DKEY-22L14 in linkage group 7, complete sequence Length = 134966 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 43 atgtgtgtgtagtttgtataaaaggaaaaagg 74 |||||||||| |||||||||||| |||||||| Sbjct: 114094 atgtgtgtgt-gtttgtataaaaagaaaaagg 114124
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 agagagtagaaaagagagag 535 |||||||||||||||||||| Sbjct: 15601465 agagagtagaaaagagagag 15601446
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gagatgcttggtagcacagg 224 |||||||||||||||||||| Sbjct: 12772513 gagatgcttggtagcacagg 12772532
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 agagagtagaaaagagagag 535 |||||||||||||||||||| Sbjct: 88831 agagagtagaaaagagagag 88812
>gb|AC080018.14|AC080018 Mus musculus 3 BAC RP23-200E11 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 209643 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gtgtatgtgtgtgtagtttg 58 |||||||||||||||||||| Sbjct: 111131 gtgtatgtgtgtgtagtttg 111112
>gb|AC151984.3| Mus musculus BAC clone RP23-388K15 from chromosome 10, complete sequence Length = 201867 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 515 cagagagtagaaaagagagagcag 538 ||||||| |||||||||||||||| Sbjct: 81564 cagagagaagaaaagagagagcag 81541
>gb|AC097506.3| Homo sapiens BAC clone RP11-366P6 from 2, complete sequence Length = 43657 Score = 40.1 bits (20), Expect = 8.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 39 gtgtatgtgtgtgtagtttgtataaaag 66 |||||||||||||| ||||||||||||| Sbjct: 29111 gtgtatgtgtgtgt-gtttgtataaaag 29137
>gb|AC007251.4| Homo sapiens BAC clone RP11-373G23 from 2, complete sequence Length = 180964 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 aaatggccattgggaatgca 588 |||||||||||||||||||| Sbjct: 80381 aaatggccattgggaatgca 80362
>emb|BX296551.4| Zebrafish DNA sequence from clone CH211-224L10 in linkage group 23, complete sequence Length = 180447 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tgtttgatttgccgtcccag 289 |||||||||||||||||||| Sbjct: 20232 tgtttgatttgccgtcccag 20251 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tgtttgatttgccgtcccag 289 |||||||||||||||||||| Sbjct: 17596 tgtttgatttgccgtcccag 17615
>gb|AY135690.1| Mus musculus argonaute 4 protein (Ago4) gene, complete cds Length = 92047 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 gtgtatgtgtgtgtagtttgtata 62 ||||||||||||||||| |||||| Sbjct: 5674 gtgtatgtgtgtgtagtgtgtata 5697
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gagatgcttggtagcacagg 224 |||||||||||||||||||| Sbjct: 80290 gagatgcttggtagcacagg 80309
>emb|BX004838.8| Zebrafish DNA sequence from clone DKEY-29N1 in linkage group 7, complete sequence Length = 226160 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 43 atgtgtgtgtagtttgtataaaaggaaaaagg 74 |||||||||| |||||||||||| |||||||| Sbjct: 104813 atgtgtgtgt-gtttgtataaaaagaaaaagg 104783
>emb|AL929242.16| Mouse DNA sequence from clone RP23-78D16 on chromosome 2, complete sequence Length = 217352 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 ttgtataaaaggaaaaaggagaaa 79 |||| ||||||||||||||||||| Sbjct: 54061 ttgtttaaaaggaaaaaggagaaa 54084
>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome Length = 791654 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 aaaagatgaagcaatttgta 436 |||||||||||||||||||| Sbjct: 208221 aaaagatgaagcaatttgta 208240
>gb|AC153855.4| Mus musculus 6 BAC RP23-175B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183070 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aaaaggaaaaaggagaaata 81 |||||||||||||||||||| Sbjct: 47715 aaaaggaaaaaggagaaata 47734
>gb|AC104742.9| Mus musculus chromosome 5, clone RP24-334A12, complete sequence Length = 117378 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 atgtgtgtgtagtttgtata 62 |||||||||||||||||||| Sbjct: 109086 atgtgtgtgtagtttgtata 109067
>gb|AF068872.1|AF068872 Glycine curvata glutamine synthetase gene, paralog 1, nuclear gene encoding chloroplast protein, partial cds Length = 1257 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 aaggaaaaaggagaaataag 83 |||||||||||||||||||| Sbjct: 641 aaggaaaaaggagaaataag 622
>gb|AC106797.2| Homo sapiens chromosome 5 clone RP11-433I2, complete sequence Length = 169265 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 atcctgtcttcctctgtgat 350 |||||||||||||||||||| Sbjct: 83576 atcctgtcttcctctgtgat 83557
>dbj|AP001318.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-712L6, complete sequence Length = 159565 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tttgtataaaaggaaaaagg 74 |||||||||||||||||||| Sbjct: 54974 tttgtataaaaggaaaaagg 54993
>emb|AL844511.14| Mouse DNA sequence from clone RP23-244B6 on chromosome 2, complete sequence Length = 144077 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tctcatcaagaatgaactcc 495 |||||||||||||||||||| Sbjct: 125865 tctcatcaagaatgaactcc 125846
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 agagagtagaaaagagagag 535 |||||||||||||||||||| Sbjct: 15609706 agagagtagaaaagagagag 15609687
>emb|AL670236.9| Mouse DNA sequence from clone RP23-242K15 on chromosome 4, complete sequence Length = 232950 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 505 tcacccctgtcagagagtagaaaa 528 ||||| |||||||||||||||||| Sbjct: 51371 tcacctctgtcagagagtagaaaa 51348
>emb|AL833626.1|HSM804939 Homo sapiens mRNA; cDNA DKFZp686M1273 (from clone DKFZp686M1273) Length = 3365 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 taaaaggaaaaaggagaaat 80 |||||||||||||||||||| Sbjct: 1290 taaaaggaaaaaggagaaat 1271
>dbj|AP003150.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-215C1, complete sequences Length = 150724 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tatgtgtgtgtagtttgtat 61 |||||||||||||||||||| Sbjct: 148793 tatgtgtgtgtagtttgtat 148812
>emb|CR788250.6| Human DNA sequence from clone DAMC-146E17 on chromosome 6, complete sequence Length = 88203 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ataaaaggaaaaaggagaaa 79 |||||||||||||||||||| Sbjct: 62755 ataaaaggaaaaaggagaaa 62736
>dbj|AP003148.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-190J24, complete sequences Length = 172173 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tatgtgtgtgtagtttgtat 61 |||||||||||||||||||| Sbjct: 30564 tatgtgtgtgtagtttgtat 30583
>gb|BC042646.1| Mus musculus bromodomain adjacent to zinc finger domain, 2B, mRNA (cDNA clone IMAGE:5357055), complete cds Length = 1860 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ttgtataaaaggaaaaaggagaaa 79 |||| ||||||||||||||||||| Sbjct: 586 ttgtttaaaaggaaaaaggagaaa 563
>gb|AC132465.3| Mus musculus BAC clone RP23-58D1 from 10, complete sequence Length = 218313 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 515 cagagagtagaaaagagagagcag 538 ||||||| |||||||||||||||| Sbjct: 196219 cagagagaagaaaagagagagcag 196196
>gb|BC053917.1| Mus musculus bromodomain adjacent to zinc finger domain, 2B, mRNA (cDNA clone IMAGE:6306095), containing frame-shift errors Length = 3668 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ttgtataaaaggaaaaaggagaaa 79 |||| ||||||||||||||||||| Sbjct: 2389 ttgtttaaaaggaaaaaggagaaa 2366
>gb|AC170262.2| Mus musculus BAC clone RP23-163J7 from chromosome 17, complete sequence Length = 219714 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 gtgtatgtgtgtgtagtttgtata 62 ||||||||||||||||| |||||| Sbjct: 150712 gtgtatgtgtgtgtagtgtgtata 150735
>emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chromosome 4, complete sequence Length = 213391 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 gtgtatgtgtgtgtagtttgtata 62 ||||||||||||||||| |||||| Sbjct: 112248 gtgtatgtgtgtgtagtgtgtata 112225
>emb|AL606745.11| Mouse DNA sequence from clone RP23-32L6 on chromosome 3, complete sequence Length = 192332 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gagatcacttcacaaaaatg 136 |||||||||||||||||||| Sbjct: 98228 gagatcacttcacaaaaatg 98209
>emb|AL731843.14| Mouse DNA sequence from clone RP23-300F6 on chromosome X, complete sequence Length = 226657 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tggctttcacaatctcatca 483 |||||||||||||||||||| Sbjct: 68773 tggctttcacaatctcatca 68792
>emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from 12 cosmids, map Xp21.1 region DXS709-SRPX, complete sequence Length = 337101 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 aaggaaaaaggagaaataag 83 |||||||||||||||||||| Sbjct: 330835 aaggaaaaaggagaaataag 330816
>emb|AL606832.4| Mouse DNA sequence from clone RP23-346G22 on chromosome 3, complete sequence Length = 157428 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 gtgtatgtgtgtgtagtttg 58 |||||||||||||||||||| Sbjct: 83766 gtgtatgtgtgtgtagtttg 83785 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,185,841 Number of Sequences: 3902068 Number of extensions: 7185841 Number of successful extensions: 312377 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 311717 Number of HSP's gapped (non-prelim): 653 length of query: 649 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 626 effective length of database: 17,143,297,704 effective search space: 10731704362704 effective search space used: 10731704362704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
