>DEFA_AEDAE (P91793) Defensin-A precursor (AaDef)|
          Length = 98

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 19/53 (35%), Positives = 23/53 (43%)
 Frame = +1

Query: 394 AAVSCQPQHPCLKPGARRFALGLVALLPQFLVSRRVSLYLAEKKLCHLPSAFG 552
           A  S  PQ P L   AR FA  L   LP+      V  +  ++  C L S FG
Sbjct: 16  AITSAYPQEPVLADEARPFANSLFDELPEETYQAAVENFRLKRATCDLLSGFG 68

>PARP1_HUMAN (P09874) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)|
           (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
           (Poly[ADP-ribose] synthetase 1)
          Length = 1013

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 517 QQDIVKPSDSQGTVAATPPAPERSAEPQVSNKDAAVDR 404
           +QD + P ++  +VAATPP P  ++ P   N  A+ D+
Sbjct: 351 KQDRIFPPETSASVAATPP-PSTASAPAAVNSSASADK 387

>GP125_HUMAN (Q8IWK6) Probable G-protein coupled receptor 125 precursor|
          Length = 1321

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -2

Query: 535  GDRASSQQDIVKPSDSQGTVAATPPAPERSAEPQVSNKDAA 413
            G  + S Q  V+P +S GT    P  P  SAE   +NK A+
Sbjct: 1064 GRSSYSVQVNVQPPNSNGTNGEAPKCPNSSAESSCTNKSAS 1104

>FLAJ_METJA (Q58311) Flagella accessory protein J|
          Length = 562

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
 Frame = +2

Query: 5   IWHTNEKPSSTXVELHHGIHDR--------ET*QWSNHIMGRSPWP*VAYPLQLHLNYSQ 160
           +WHT EKP+ T ++L   +               W+ +I+G SP+  + Y + + L ++ 
Sbjct: 254 LWHTGEKPTETDIKLRKWLIISVILVVILLPFLLWAKYIVGLSPFSQMPYMILVALGFTP 313

Query: 161 KLLG 172
             +G
Sbjct: 314 LAIG 317

>CLCNX_USTMA (P0C197) Probable chloride channel protein UM03490-D|
          Length = 1131

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +1

Query: 388 WSAAVSCQPQHPCLKPGARRFALGLVALL 474
           WS   +CQP  PC+ PG   F LG  A L
Sbjct: 633 WSLFSACQPDVPCITPGTYAF-LGAAAAL 660

>CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog|
          Length = 319

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -2

Query: 553 ARKQKEGDRASSQQDIVKPSDSQGTVAATPPAPERSAEPQVSNKDAAVDRT 401
           ++ +   D AS+  D  +PS++  +   +P AP+ S  P       AV +T
Sbjct: 11  SKMENSSDSASTSPDAPQPSENPPSPPTSPAAPQTSENPPSPPTSPAVPQT 61

>RPA1_TRYBB (P16355) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)|
          Length = 1744

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 200  ANVSCKNTTAPVISGSNSDEAVGGKQLRAKASAPLCDC 87
            A+V+      PV + +  DE V  K LRA  +A L DC
Sbjct: 1207 ASVNKAAVVVPVTNATEEDEKVIAKMLRAGVAAKLTDC 1244


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,644,243
Number of Sequences: 219361
Number of extensions: 1511566
Number of successful extensions: 4627
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4625
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)