Clone Information

BLAST Search Result

Clone Name	rbaal6c13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	HAP28_RAT (Q62785) 28 kDa heat- and acid-stable phosphoprotein (...	96	1e-19
2	HAP28_MOUSE (Q3UHX2) 28 kDa heat- and acid-stable phosphoprotein...	96	1e-19
3	HAP28_HUMAN (Q13442) 28 kDa heat- and acid-stable phosphoprotein...	94	3e-19
4	SNX41_NEUCR (Q7SB54) Sorting nexin-41	35	0.22
5	BBX_HUMAN (Q8WY36) HMG box transcription factor BBX (Bobby sox h...	35	0.22
6	PT1_BACSU (P08838) Phosphoenolpyruvate-protein phosphotransferas...	34	0.49
7	ERC2_RAT (Q8K3M6) ERC protein 2 (CAZ-associated structural prote...	34	0.49
8	ERC2_HUMAN (O15083) ERC protein 2	34	0.49
9	ERC2_MOUSE (Q6PH08) ERC protein 2 (CAZ-associated structural pro...	33	0.64
10	YAFA_SCHPO (Q09863) Hypothetical protein C29E6.10c in chromosome I	33	1.1
11	KIF4A_XENLA (Q91784) Chromosome-associated kinesin KLP1 (Chromok...	33	1.1
12	TRDN_CANFA (P82179) Triadin	33	1.1
13	KIF3A_PONPY (Q5R4H3) Kinesin-like protein KIF3A (Microtubule plu...	32	1.4
14	KIF3A_MACFA (Q4R628) Kinesin-like protein KIF3A (Microtubule plu...	32	1.4
15	KIF3A_HUMAN (Q9Y496) Kinesin-like protein KIF3A (Microtubule plu...	32	1.4
16	CYB_TOXGO (O20672) Cytochrome b	32	1.9
17	NUCB2_RAT (Q9JI85) Nucleobindin-2 precursor (DNA-binding protein...	31	3.2
18	NUCB2_MOUSE (P81117) Nucleobindin-2 precursor (DNA-binding prote...	31	3.2
19	PRP45_KLULA (Q6CLJ7) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-pr...	31	3.2
20	TNIP3_HUMAN (Q96KP6) TNFAIP3-interacting protein 3 (Listeria-ind...	31	4.1
21	RB6I2_RAT (Q811U3) RAB6-interacting protein 2 (ERC protein 1) (E...	31	4.1
22	TAXB1_BRARE (Q6P132) Tax1-binding protein 1 homolog	31	4.1
23	ABRA_PLAFC (P22620) 101 kDa malaria antigen (p101) (Acidic basic...	31	4.1
24	TNNT_CAEEL (Q27371) Troponin T	30	5.4
25	ARP4_STRPY (P13050) IgA receptor precursor	30	7.1
26	PGBA_HELPJ (Q9ZLW8) Plasminogen-binding protein pgbA	30	7.1
27	KIF3A_MOUSE (P28741) Kinesin-like protein KIF3A (Microtubule plu...	30	7.1
28	CEP2_HUMAN (Q9BV73) Centrosomal protein 2 (Centrosomal Nek2-asso...	30	7.1
29	MOES_PIG (P26042) Moesin (Membrane-organizing extension spike pr...	30	7.1
30	RRP5_HUMAN (Q14690) RRP5 protein homolog (Programmed cell death ...	30	9.2
31	MYH8_HUMAN (P13535) Myosin-8 (Myosin heavy chain, skeletal muscl...	30	9.2
32	ABTAP_HUMAN (Q9H501) ABT1-associated protein	30	9.2
33	SYCP1_RAT (Q03410) Synaptonemal complex protein 1 (SCP-1)	30	9.2
34	ABDA_DROME (P29555) Homeobox protein abdominal-A	30	9.2
35	FA50A_HUMAN (Q14320) Protein FAM50A (XAP-5 protein) (HXC-26 prot...	30	9.2
36	FYV7_CANGA (Q6FUQ5) Protein FYV7	30	9.2
37	YN48_YEAST (P42846) Hypothetical 68.7 kDa protein in STB1-MCK1 i...	30	9.2
38	YMX3_CAEEL (P34511) Hypothetical protein K06H7.3	30	9.2
39	MOES_HUMAN (P26038) Moesin (Membrane-organizing extension spike ...	30	9.2
40	PGBB_HELPJ (Q9ZKY5) Plasminogen-binding protein pgbB	30	9.2

>HAP28_RAT (Q62785) 28 kDa heat- and acid-stable phosphoprotein|
           (PDGF-associated protein) (PAP) (PDGFA-associated
           protein 1) (PAP1)
          Length = 181

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 65/158 (41%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
 Frame = -3

Query: 690 EGKFKGKPTGR-RNFSTPEEI--------------------ASGTSGRPRSFKKNXXXXX 574
           +G  KG   GR R +++PEEI                      G SG P+  KK+     
Sbjct: 3   KGGRKGGHKGRVRQYTSPEEIDAQLQAEKQKANEEDEQEEGGDGASGDPKKEKKSLDSDE 62

Query: 573 XXXXXXXXXXXXXXXXXXXEKKHKGTEGVIQIENPNLVKAKNIKAKEADLGKTTELSRRE 394
                               +K KG EG+I IENPN V     K  + DL    ELSRRE
Sbjct: 63  SEDEDDDYQ-----------QKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRRE 111

Query: 393 REEIEKQKSHERYMKLQEQGKTEQAKKDLERLALIRQQ 280
           REEIEKQK+ ERYMK+   GKTEQAK DL RLA+IR+Q
Sbjct: 112 REEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQ 149

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>HAP28_MOUSE (Q3UHX2) 28 kDa heat- and acid-stable phosphoprotein|
           (PDGF-associated protein) (PAP) (PDGFA-associated
           protein 1) (PAP1)
          Length = 181

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 65/158 (41%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
 Frame = -3

Query: 690 EGKFKGKPTGR-RNFSTPEEI--------------------ASGTSGRPRSFKKNXXXXX 574
           +G  KG   GR R +++PEEI                      G SG P+  KK+     
Sbjct: 3   KGGRKGGHKGRVRQYTSPEEIDAQLQAEKQKANEEDEQEEGGDGASGDPKKEKKSLDSDE 62

Query: 573 XXXXXXXXXXXXXXXXXXXEKKHKGTEGVIQIENPNLVKAKNIKAKEADLGKTTELSRRE 394
                               +K KG EG+I IENPN V     K  + DL    ELSRRE
Sbjct: 63  SEDEDDDYQ-----------QKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRRE 111

Query: 393 REEIEKQKSHERYMKLQEQGKTEQAKKDLERLALIRQQ 280
           REEIEKQK+ ERYMK+   GKTEQAK DL RLA+IR+Q
Sbjct: 112 REEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQ 149

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>HAP28_HUMAN (Q13442) 28 kDa heat- and acid-stable phosphoprotein|
           (PDGF-associated protein) (PAP) (PDGFA-associated
           protein 1) (PAP1)
          Length = 181

 Score = 94.4 bits (233), Expect = 3e-19
 Identities = 64/158 (40%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
 Frame = -3

Query: 690 EGKFKGKPTGR-RNFSTPEEI--------------------ASGTSGRPRSFKKNXXXXX 574
           +G  KG   GR R +++PEEI                      G +G P+  KK+     
Sbjct: 3   KGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDE 62

Query: 573 XXXXXXXXXXXXXXXXXXXEKKHKGTEGVIQIENPNLVKAKNIKAKEADLGKTTELSRRE 394
                               +K KG EG+I IENPN V     K  + DL    ELSRRE
Sbjct: 63  SEDEEDDYQ-----------QKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRRE 111

Query: 393 REEIEKQKSHERYMKLQEQGKTEQAKKDLERLALIRQQ 280
           REEIEKQK+ ERYMK+   GKTEQAK DL RLA+IR+Q
Sbjct: 112 REEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQ 149

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>SNX41_NEUCR (Q7SB54) Sorting nexin-41|
          Length = 604

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 21/67 (31%), Positives = 35/67 (52%)
 Frame = -3

Query: 504 KGTEGVIQIENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTE 325
           K  E ++Q+E   +  AK++K   A + K  +  +RE+E+  K     RYM    + + E
Sbjct: 528 KTRESIVQLEQAQIASAKDVKDASASVLKDLKRFQREKEDDLK-----RYMLAYAKSQIE 582

Query: 324 QAKKDLE 304
            AKK+ E
Sbjct: 583 WAKKNQE 589

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>BBX_HUMAN (Q8WY36) HMG box transcription factor BBX (Bobby sox homolog) (HMG|
           box-containing protein 2)
          Length = 941

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
 Frame = -3

Query: 477 ENPNLVKAKNIKAKEADLGKTTELSR-REREEIEKQKSHERYMKLQEQGKTEQAKKD 310
           E   + ++K IKAKE+D G+  EL + +E +EI+ +K+ E   +LQ++ + E++ K+
Sbjct: 308 EGMKMEESKLIKAKESDGGRIKELEKGKEEKEIKMEKTDE--TRLQKEAEFEKSAKE 362

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>PT1_BACSU (P08838) Phosphoenolpyruvate-protein phosphotransferase (EC|
           2.7.3.9) (Phosphotransferase system, enzyme I)
          Length = 570

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -3

Query: 483 QIENPNL-VKAKNIKAKEADLGKTTELSRREREEIEKQKSH 364
           ++E P+L V+ KNI   EA++ +  E   R +EE+EK K H
Sbjct: 20  RLEEPDLTVEKKNISDSEAEVSRFDEAIARSKEELEKIKEH 60

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>ERC2_RAT (Q8K3M6) ERC protein 2 (CAZ-associated structural protein 1)|
           (CAST1) (Cast) (Cytomatrix protein p110)
          Length = 957

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
 Frame = -3

Query: 510 KHKGTEGVIQIENPNLVKA-KNIKAKEADLGK-------TTELSRREREEIEKQKSHERY 355
           K K  + VI++++  +    +NI+  E ++          TE    E ++IE  KSH ++
Sbjct: 372 KTKALQTVIEMKDTKIASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKF 431

Query: 354 MKLQ-EQGKTEQAKKDLERLAL 292
           MK + +Q K E +KK+ E LAL
Sbjct: 432 MKTKNDQLKQELSKKESELLAL 453

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>ERC2_HUMAN (O15083) ERC protein 2|
          Length = 957

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
 Frame = -3

Query: 510 KHKGTEGVIQIENPNLVKA-KNIKAKEADLGK-------TTELSRREREEIEKQKSHERY 355
           K K  + VI++++  +    +NI+  E ++          TE    E ++IE  KSH ++
Sbjct: 372 KTKALQTVIEMKDTKIASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKF 431

Query: 354 MKLQ-EQGKTEQAKKDLERLAL 292
           MK + +Q K E +KK+ E LAL
Sbjct: 432 MKTKIDQLKQELSKKESELLAL 453

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>ERC2_MOUSE (Q6PH08) ERC protein 2 (CAZ-associated structural protein 1)|
           (CAST1)
          Length = 957

 Score = 33.5 bits (75), Expect = 0.64
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
 Frame = -3

Query: 510 KHKGTEGVIQIENPNLVKA-KNIKAKEADLGK-------TTELSRREREEIEKQKSHERY 355
           K K  + VI++++  +    +NI+  E ++          TE    E ++IE  KSH ++
Sbjct: 372 KTKALQTVIEMKDTKIASLERNIRDLEDEVQMLKANGVLNTEDREEEIKQIEVYKSHSKF 431

Query: 354 MKLQ-EQGKTEQAKKDLERLAL 292
           MK + +Q K E +KK+ E LAL
Sbjct: 432 MKTKIDQLKQELSKKESELLAL 453

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>YAFA_SCHPO (Q09863) Hypothetical protein C29E6.10c in chromosome I|
          Length = 1085

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -3

Query: 459 KAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAKKDLERL 298
           K +  + K     K  EL R++REE +KQK  E+ +K Q+Q    +     +RL
Sbjct: 640 KREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRL 693

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>KIF4A_XENLA (Q91784) Chromosome-associated kinesin KLP1 (Chromokinesin)|
          Length = 1226

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = -3

Query: 510 KHKGTE-GVIQIENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQG 334
           KH  +E GV+Q E   L+ A +   K+ +  K +E  R+  +E+E Q + E   KL EQ 
Sbjct: 565 KHLESEVGVLQKEKEELILALHSAKKDNNQAKLSERRRKRLQELEGQMT-ELKKKLGEQS 623

Query: 333 KTEQAKKDLER 301
           K  + ++  E+
Sbjct: 624 KLLKLRESTEK 634

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>TRDN_CANFA (P82179) Triadin|
          Length = 700

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 18/53 (33%), Positives = 31/53 (58%)
 Frame = -3

Query: 462 VKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAKKDLE 304
           VKAK  +AKE     +T+ +   ++E +  K+ E+ ++ ++ GKT  A KD E
Sbjct: 414 VKAKTERAKEETSAASTKKAVPGKKEEKTTKTVEQEIRKEKSGKTSTASKDKE 466

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>KIF3A_PONPY (Q5R4H3) Kinesin-like protein KIF3A (Microtubule plus end-directed|
           kinesin motor 3A)
          Length = 702

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
 Frame = -3

Query: 477 ENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKS--HERYMKLQE--QGKTEQAKK 313
           E   L++  N++ +E    K  E  RRE EE E+++    E+Y  LQE  QGKT++ KK
Sbjct: 495 EQEKLLEESNMELEERR--KRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKK 551

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>KIF3A_MACFA (Q4R628) Kinesin-like protein KIF3A (Microtubule plus end-directed|
           kinesin motor 3A)
          Length = 702

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
 Frame = -3

Query: 477 ENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKS--HERYMKLQE--QGKTEQAKK 313
           E   L++  N++ +E    K  E  RRE EE E+++    E+Y  LQE  QGKT++ KK
Sbjct: 495 EQEKLLEESNMELEERR--KRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKK 551

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>KIF3A_HUMAN (Q9Y496) Kinesin-like protein KIF3A (Microtubule plus end-directed|
           kinesin motor 3A)
          Length = 702

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
 Frame = -3

Query: 477 ENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKS--HERYMKLQE--QGKTEQAKK 313
           E   L++  N++ +E    K  E  RRE EE E+++    E+Y  LQE  QGKT++ KK
Sbjct: 495 EQEKLLEESNMELEERR--KRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKK 551

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>CYB_TOXGO (O20672) Cytochrome b|
          Length = 368

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 192 WRHELS*ALLAGYLFLCILVYLNQGLYSIIY 100
           W   +  A  A ++FLCIL+++ +GLY+  Y
Sbjct: 76  WEFRMLHATTASFVFLCILIHMTRGLYNWSY 106

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>NUCB2_RAT (Q9JI85) Nucleobindin-2 precursor (DNA-binding protein NEFA)|
          Length = 420

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
 Frame = -3

Query: 477 ENPNLVKAKN----IKAKEADLGKTTELSRREREEIEKQKSHER--YMKL--QEQGKTEQ 322
           +NP+  ++K+    IKA  ADL +       E ++ E  K HER  Y+K   +E+ K E+
Sbjct: 145 QNPDTFESKDLDMLIKAATADLEQYDRTRHEEFKKYEMMKEHERREYLKTLSEEKRKEEE 204

Query: 321 AK 316
           AK
Sbjct: 205 AK 206

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>NUCB2_MOUSE (P81117) Nucleobindin-2 precursor (DNA-binding protein NEFA)|
          Length = 420

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
 Frame = -3

Query: 477 ENPNLVKAKN----IKAKEADLGKTTELSRREREEIEKQKSHER--YMKLQEQGKTEQAK 316
           +NPN  ++++    IKA  ADL +       E ++ E  K HER  Y+K   + K ++ +
Sbjct: 145 QNPNTFESRDLDMLIKAATADLEQYDRTRHEEFKKYEMMKEHERREYLKTLSEEKRKEEE 204

Query: 315 KDLERL 298
              E +
Sbjct: 205 SKFEEM 210

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>PRP45_KLULA (Q6CLJ7) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-processing|
           protein 45)
          Length = 430

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 16/55 (29%), Positives = 33/55 (60%)
 Frame = -3

Query: 465 LVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAKKDLER 301
           L K + +K KE  L    E +R++RE   + ++ + Y++  E+ +  +A+++LER
Sbjct: 241 LEKEETLK-KEQRLRHLAERARQDRENRRQYENEDHYVREMERNQRRRAERELER 294

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>TNIP3_HUMAN (Q96KP6) TNFAIP3-interacting protein 3 (Listeria-induced gene|
           protein) (A20-binding inhibitor of NF-kappa B activation
           3) (ABIN-3)
          Length = 319

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/57 (28%), Positives = 32/57 (56%)
 Frame = -3

Query: 477 ENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAKKDL 307
           ++P+  + K+ + +E D  +     R +REE EK++ +E   +L+E+ K  + K  L
Sbjct: 91  KDPHQRQRKDDRQREDDRQRDLTRDRLQREEKEKERLNEELHELKEENKLLKGKNTL 147

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>RB6I2_RAT (Q811U3) RAB6-interacting protein 2 (ERC protein 1) (ERC1)|
           (CAZ-associated structural protein 2) (CAST2)
          Length = 948

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
 Frame = -3

Query: 510 KHKGTEGVIQIENPNLVKA----KNIKAKEADLGKTTELSRREREEIEKQ----KSHERY 355
           K K  + VI++++  +       ++++ +   L     LS  EREE  KQ    +SH ++
Sbjct: 376 KTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKF 435

Query: 354 MKLQ-EQGKTEQAKKDLERLAL 292
           MK +  Q K E ++KD E LAL
Sbjct: 436 MKNKIGQVKQELSRKDTELLAL 457

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>TAXB1_BRARE (Q6P132) Tax1-binding protein 1 homolog|
          Length = 810

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/59 (27%), Positives = 34/59 (57%)
 Frame = -3

Query: 459 KAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAKKDLERLALIRQ 283
           K + I+ ++ +L +  +L ++ER+E+  +K+       QE+  + Q +KD++ L L  Q
Sbjct: 146 KMEQIQQEKKELLENLDLLQKERDELIDEKNRLEKEYEQERESSAQLRKDVQELQLSAQ 204

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>ABRA_PLAFC (P22620) 101 kDa malaria antigen (p101) (Acidic basic repeat|
           antigen)
          Length = 743

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -3

Query: 453 KNIKAKEADLGKTTELSRREREEIEK-QKSHERYMKLQEQGKTEQAKKDLE 304
           KN + +E +  K  E   +E+EE EK +K  E+  K +E+ + E+ KK+ E
Sbjct: 672 KNKEEEEKEKEKEKEKEEKEKEEKEKEEKEKEKEEKEKEKEEKEEEKKEKE 722

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>TNNT_CAEEL (Q27371) Troponin T|
          Length = 405

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
 Frame = -3

Query: 513 KKHKGTEG--VIQIENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQE 340
           K+H+  E   ++  E   +++ + I+ +  +L +  E  R EREE E+Q +  R    + 
Sbjct: 72  KRHEEEEAAKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQFAERRRQDDER 131

Query: 339 QGKTE---QAKKDLERL 298
           + K E   +AK D E++
Sbjct: 132 RRKEEDERKAKADAEKI 148

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>ARP4_STRPY (P13050) IgA receptor precursor|
          Length = 386

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = -3

Query: 513 KKHKGTEGVIQIENPNLVKAKNIK-AKEADLGKTTELSRREREEIEKQKSHERYMKLQEQ 337
           KKH+  +  ++ E   L K K I  A    L +  E SR  ++E+E +    +  K    
Sbjct: 144 KKHQQEQQQLEAEKQKLAKDKQISDASRQGLSRDLEASRAAKKELEAEHQKLKEEKQISD 203

Query: 336 GKTEQAKKDLE 304
              +   +DLE
Sbjct: 204 ASRQGLSRDLE 214

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>PGBA_HELPJ (Q9ZLW8) Plasminogen-binding protein pgbA|
          Length = 450

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 17/58 (29%), Positives = 32/58 (55%)
 Frame = -3

Query: 477 ENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAKKDLE 304
           EN +++K    K KEA    + E  RR +EE +K K+ +R  + +++ +  Q + + E
Sbjct: 381 ENTSVLKESAAK-KEAPKPSSKEEKRRLKEEKKKAKAEQRAREFEQRAREHQERDEKE 437

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>KIF3A_MOUSE (P28741) Kinesin-like protein KIF3A (Microtubule plus end-directed|
           kinesin motor 3A)
          Length = 701

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
 Frame = -3

Query: 477 ENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKS--HERYMKLQE--QGKTEQAKK 313
           E   L++  N++ +E    +  E  R+E EE E+++    E+Y  LQE  QGKT++ KK
Sbjct: 494 EQEKLLEESNMELEERR--RRAEQLRKELEEKEQERLDIEEKYTSLQEEAQGKTKKLKK 550

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>CEP2_HUMAN (Q9BV73) Centrosomal protein 2 (Centrosomal Nek2-associated protein|
            1) (C-NAP1) (Centrosome protein 250)
            (Centrosome-associated protein CEP250)
          Length = 2442

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -3

Query: 435  EADLGKTTELSRREREEIEKQKSHERYMKLQEQG--KTEQAKKDLERLALIRQ 283
            E DL       + + EE+E ++  ER   LQEQG  K  Q K   E LAL+ Q
Sbjct: 1378 EEDLRTARSALKLKNEEVESER--ERAQALQEQGELKVAQGKALQENLALLTQ 1428

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>MOES_PIG (P26042) Moesin (Membrane-organizing extension spike protein)|
          Length = 576

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = -3

Query: 420 KTTELSRREREEIEKQKSH--ERYMKLQEQGKTEQAKKDLE---RLALIRQQ 280
           K  E++ +E+E+IE++K    ER  +++EQ  T++A+++LE   R AL  +Q
Sbjct: 327 KKREMAEKEKEKIEREKEELMERLKQIEEQ--TKKAQQELEEQTRRALALEQ 376

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>RRP5_HUMAN (Q14690) RRP5 protein homolog (Programmed cell death protein 11)|
          Length = 1871

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = -3

Query: 471  PNLVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQE----QGKTEQAKKDLE 304
            P L ++ + +  E     T + S++ERE +EKQK+ +   +++E     G+  ++  D +
Sbjct: 1551 PPLAESSDSEEDEKPHQATIKKSKKERE-LEKQKAEKELSRIEEALMDPGRQPESADDFD 1609

Query: 303  RLAL 292
            RL L
Sbjct: 1610 RLVL 1613

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>MYH8_HUMAN (P13535) Myosin-8 (Myosin heavy chain, skeletal muscle, perinatal)|
            (MyHC-perinatal)
          Length = 1937

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = -3

Query: 459  KAKNIKAKEADLGKTTELSRREREEIEKQKS------HERYMKLQEQGKTEQAKKDLER 301
            K K ++A+  +LG+  E  R  R + EKQ+S       E   +L+E G    A+ +L +
Sbjct: 1110 KIKELQARIEELGEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQVELNK 1168

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>ABTAP_HUMAN (Q9H501) ABT1-associated protein|
          Length = 851

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -3

Query: 459 KAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAKK-DLERLALIRQ 283
           K K  +  + D       S  + EEIE++   +  + ++E GKT++++K D E++A  RQ
Sbjct: 525 KFKKEELLDMDFQAYLASSSEDEEEIEEELQGDDGVNVEEDGKTKKSQKDDEEQIAKYRQ 584

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>SYCP1_RAT (Q03410) Synaptonemal complex protein 1 (SCP-1)|
          Length = 997

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = -3

Query: 456 AKNIKAKEADLGKTTELSRREREEIEKQ-----KSHERYMKLQEQGKTEQAKKDLERLAL 292
           A+ ++ KE +L    +   +E  ++E Q      S E Y+K  E+ KTE  K+ L+ + L
Sbjct: 458 AEELQGKEQELTFLLQTREKEIHDLEVQVTVTKTSEEHYLKQVEEMKTELEKEKLKNIEL 517

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>ABDA_DROME (P29555) Homeobox protein abdominal-A|
          Length = 590

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 18/69 (26%), Positives = 35/69 (50%)
 Frame = -3

Query: 486 IQIENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAKKDL 307
           I  +N  +   K ++A +    +  E +RR+REE EK K+ E     Q+  + +Q ++  
Sbjct: 444 IWFQNRRMKLKKELRAVK----EINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQ 499

Query: 306 ERLALIRQQ 280
           ++    +QQ
Sbjct: 500 QQQQQQQQQ 508

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>FA50A_HUMAN (Q14320) Protein FAM50A (XAP-5 protein) (HXC-26 protein)|
          Length = 339

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
 Frame = -3

Query: 507 HKGTEGVIQIENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQ---EQ 337
           +   E  ++     LV   ++KAK+  L K      RE++  +K++S E  MKL+   E+
Sbjct: 53  YDAVEAELKSSTVGLVTLNDMKAKQEALVK-----EREKQLAKKEQSKELQMKLEKLREK 107

Query: 336 GKTEQAKKDLERLALIRQQ 280
            + ++AK+ +  L+   ++
Sbjct: 108 ERKKEAKRKISSLSFTLEE 126

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>FYV7_CANGA (Q6FUQ5) Protein FYV7|
          Length = 152

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 19/72 (26%), Positives = 37/72 (51%)
 Frame = -3

Query: 495 EGVIQIENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAK 316
           EG    E     +  N+K  + D     +    E++E++KQ+  E+  KL+E+ + E+  
Sbjct: 45  EGYAVPEKETSRREVNVKKLKEDKRLEGKKKIDEKKELKKQRKREQREKLEERRRKEE-- 102

Query: 315 KDLERLALIRQQ 280
              E++ +IRQ+
Sbjct: 103 ---EKVKIIRQK 111

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>YN48_YEAST (P42846) Hypothetical 68.7 kDa protein in STB1-MCK1 intergenic|
           region
          Length = 591

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = -3

Query: 477 ENPNLVKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAKKDLERL 298
           E+PN  +  +    +A L ++ + SRR + E EK+K  E+    +E    ++  K L +L
Sbjct: 266 EDPNAAEIISYARSQATLRRSDDSSRRRKRE-EKRKIKEQIKAEKETALQKKKTKKLNKL 324

Query: 297 ALIRQQ 280
             I +Q
Sbjct: 325 TDILEQ 330

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>YMX3_CAEEL (P34511) Hypothetical protein K06H7.3|
          Length = 618

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -3

Query: 420 KTTELSR-REREEIEKQKSHERYMKLQEQGKTEQAKKDLERL 298
           K  EL+  +ERE+ E++K  +   K +E+ K E AK+D+E +
Sbjct: 511 KKVELTEEQEREQAERKKEKKARQKEKEKLKKEIAKRDVEEM 552

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>MOES_HUMAN (P26038) Moesin (Membrane-organizing extension spike protein)|
          Length = 576

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 15/41 (36%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
 Frame = -3

Query: 420 KTTELSRREREEIEKQKSH--ERYMKLQEQGKTEQAKKDLE 304
           K  E++ +E+E+IE++K    ER  +++EQ  T++A+++LE
Sbjct: 327 KKREMAEKEKEKIEREKEELMERLKQIEEQ--TKKAQQELE 365

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>PGBB_HELPJ (Q9ZKY5) Plasminogen-binding protein pgbB|
          Length = 541

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = -3

Query: 462 VKAKNIKAKEADLGKTTELSRREREEIEKQKSHERYMKLQEQGKTEQAKKDLE 304
           +  +N   KEA    + E  RR +EE +K K+ +R  + +++ +  Q + + E
Sbjct: 476 ISKENAAKKEAPKPSSKEEKRRLKEEKKKAKAEQRAREFEQRAREHQERDEKE 528


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,134,381
Number of Sequences: 219361
Number of extensions: 1154549
Number of successful extensions: 5891
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 5494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5860
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result