ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal5n11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr... 291 4e-76
2emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur... 276 2e-71
3gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisp... 276 2e-71
4emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur... 268 5e-69
5emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp... 254 8e-65
6gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c... 141 9e-31
7emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 i... 46 0.038
8ref|NM_144845.2| Mus musculus UDP glycosyltransferases 3 family,... 44 0.15
9gb|BC022134.1| Mus musculus UDP glycosyltransferases 3 family, p... 44 0.15
10gb|BC034837.1| Mus musculus UDP glycosyltransferases 3 family, p... 44 0.15
11dbj|AK143815.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f... 44 0.15
12dbj|AK052644.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 44 0.15
13dbj|AK050128.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 44 0.15
14dbj|AK041045.1| Mus musculus adult male aorta and vein cDNA, RIK... 44 0.15
15emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 ... 42 0.59
16gb|L11243.1|RATRSKM2X Rat skeletal muscle voltage-sensitive sodi... 42 0.59
17gb|AC170993.2| Mus musculus chromosome 1, clone wi1-2059I11, com... 40 2.3
18gb|AC169498.2| Mus musculus chromosome 1, clone wi1-807J5, compl... 40 2.3
19gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 2.3
20gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome... 40 2.3
21gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.3
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.3
23ref|XM_572904.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 2.3
24emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on ch... 40 2.3
25emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chrom... 40 2.3
26gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, comp... 40 2.3
27dbj|AK054537.1| Mus musculus 2 days pregnant adult female ovary ... 40 2.3
28dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
30dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
31dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
32emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on ch... 40 2.3
33gb|AC170749.6| Mus musculus chromosome 1, clone RP23-322G4, comp... 40 2.3
34gb|AC147806.5| Mus musculus chromosome 1, clone RP23-6O16, compl... 38 9.2
35gb|AC129022.5| Mus musculus BAC clone RP23-318P2 from chromosome... 38 9.2
36gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome... 38 9.2
37gb|AC105980.13| Mus musculus chromosome 3, clone RP24-234E11, co... 38 9.2
38gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome ... 38 9.2
39gb|AC133103.5| Mus musculus BAC clone RP23-226J10 from chromosom... 38 9.2
40gb|AC125149.4| Mus musculus BAC clone RP24-354E17 from chromosom... 38 9.2
41gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, comp... 38 9.2
42gb|AC164544.4| Mus musculus chromosome 1, clone RP24-163G4, comp... 38 9.2
43gb|AC110622.6| Mus musculus BAC clone RP23-204H3 from chromosome... 38 9.2
44gb|AC122321.4| Mus musculus BAC clone RP23-319I22 from chromosom... 38 9.2
45gb|AC109233.10| Mus musculus chromosome 16, clone RP23-219N5, co... 38 9.2
46gb|AC132050.4| Rattus norvegicus 20 BAC CH230-118G13 (Children's... 38 9.2
47emb|BX005132.9| Human DNA sequence from clone RP4-603B14 on chro... 38 9.2
48emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chr... 38 9.2
49emb|AL354997.17| Human DNA sequence from clone RP11-309H8 on chr... 38 9.2
50gb|AC157275.2| Mus musculus BAC clone RP24-164M6 from chromosome... 38 9.2
51gb|AC104798.4| Homo sapiens BAC clone RP11-328N8 from 4, complet... 38 9.2
52gb|AC140344.3| Mus musculus BAC clone RP23-237M10 from chromosom... 38 9.2
53gb|AC000067.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 100h... 38 9.2
54ref|XM_624249.1| PREDICTED: Apis mellifera similar to CG3848-PC,... 38 9.2
55emb|BX813738.1|CNS0AC3X Arabidopsis thaliana Full-length cDNA Co... 38 9.2
56gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome... 38 9.2
57gb|AC103805.7| Homo sapiens chromosome 18, clone RP11-1061K3, co... 38 9.2
58dbj|AP001930.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 38 9.2
59gb|AC147185.2| Mus musculus BAC clone RP24-119J12 from 8, comple... 38 9.2
60gb|AC145348.3| Mus musculus BAC clone RP23-98E22 from 12, comple... 38 9.2
61gb|AC122870.4| Mus musculus BAC clone RP23-103D17 from 3, comple... 38 9.2
62dbj|AP006708.1| Lotus japonicus genomic DNA, chromosome 3, clone... 38 9.2
63emb|AL627128.16| Mouse DNA sequence from clone RP23-133J9 on chr... 38 9.2
64emb|AL627103.13| Mouse DNA sequence from clone RP23-414M10 on ch... 38 9.2
65emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on ch... 38 9.2
66gb|AC167036.6| Mus musculus chromosome 1, clone RP23-76P9, compl... 38 9.2
67gb|AC125604.5| Homo sapiens 3 BAC RP11-473P24 (Roswell Park Canc... 38 9.2 
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
          Length = 875

 Score =  291 bits (147), Expect = 4e-76
 Identities = 175/186 (94%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcacatacaagcatgttttctcgagccatgttggtacatgaacatggacatacacatat 60
           ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttcacatacgagcatgctttctcgagccatgttggtacatgaacatggacatacacatat 723

                                                                       
Query: 61  tcttaggaacaantangaangataaatgganaaggaaaacccaaagcaatgtcagagttg 120
           |||||||||||| || ||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 722 tcttaggaacaaataagaaagataaatggacaaggaaaacccaaagcaatgtcagagttg 663

                                                                       
Query: 121 acaaaactgcaatggcactttatntgtggcccatcgtcagtgagctgtttatgccttgcc 180
           ||||||||||||||||||||||| || ||||| | || ||||||||||||||||||||||
Sbjct: 662 acaaaactgcaatggcactttatatgcggcccgtggtgagtgagctgtttatgccttgcc 603

                 
Query: 181 ggactc 186
           ||||||
Sbjct: 602 ggactc 597
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>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39 ribulosebisphosphate carboxylase) clones 234
           and 406
          Length = 743

 Score =  276 bits (139), Expect = 2e-71
 Identities = 170/182 (93%)
 Strand = Plus / Minus

                                                                       
Query: 5   catacaagcatgttttctcgagccatgttggtacatgaacatggacatacacatattctt 64
           ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 catacgagcatgctttctcgagccatgttggtacatgaacatggacatacacatattctt 598

                                                                       
Query: 65  aggaacaantangaangataaatgganaaggaaaacccaaagcaatgtcagagttgacaa 124
           |||||||| || ||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 597 aggaacaaataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttgacaa 538

                                                                       
Query: 125 aactgcaatggcactttatntgtggcccatcgtcagtgagctgtttatgccttgccggac 184
           ||||||||||||||||||| | |||||  |||| ||||||||||||| ||||||||||||
Sbjct: 537 aactgcaatggcactttatatatggcctgtcgtgagtgagctgtttaggccttgccggac 478

             
Query: 185 tc 186
           ||
Sbjct: 477 tc 476
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>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase
           small subunit mRNA, clone pTS406, 3' end
          Length = 317

 Score =  276 bits (139), Expect = 2e-71
 Identities = 173/186 (93%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcacatacaagcatgttttctcgagccatgttggtacatgaacatggacatacacatat 60
           ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 235 ttcacatacgagcatgctttctcgagccatgttcgtacatgaacatggacatacacatat 176

                                                                       
Query: 61  tcttaggaacaantangaangataaatgganaaggaaaacccaaagcaatgtcagagttg 120
           |||||||||||| || ||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 175 tcttaggaacaaataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttg 116

                                                                       
Query: 121 acaaaactgcaatggcactttatntgtggcccatcgtcagtgagctgtttatgccttgcc 180
           ||||||||||||||||||||||| | |||||  |||| ||||||||||||| ||||||||
Sbjct: 115 acaaaactgcaatggcactttatatatggcctgtcgtgagtgagctgtttaggccttgcc 56

                 
Query: 181 ggactc 186
           ||||||
Sbjct: 55  ggactc 50
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>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
          Length = 611

 Score =  268 bits (135), Expect = 5e-69
 Identities = 172/186 (92%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcacatacaagcatgttttctcgagccatgttggtacatgaacatggacatacacatat 60
           ||||||||| |||| | ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 510 ttcacatacgagcacgctttctcgagccatgttgttacatgaacatggacatacacatat 451

                                                                       
Query: 61  tcttaggaacaantangaangataaatgganaaggaaaacccaaagcaatgtcagagttg 120
           |||||||||||| || ||| || ||||||| |||||||||||||||||||||||||||||
Sbjct: 450 tcttaggaacaagtaagaaagacaaatggagaaggaaaacccaaagcaatgtcagagttg 391

                                                                       
Query: 121 acaaaactgcaatggcactttatntgtggcccatcgtcagtgagctgtttatgccttgcc 180
           ||||||||||||||||||||||| |||||||| | || ||||||||||||| ||||||||
Sbjct: 390 acaaaactgcaatggcactttatatgtggcccgtggtgagtgagctgtttaggccttgcc 331

                 
Query: 181 ggactc 186
           ||||||
Sbjct: 330 ggactc 325
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>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase, small subunit
          Length = 837

 Score =  254 bits (128), Expect = 8e-65
 Identities = 173/187 (92%), Gaps = 2/187 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcacatacaagcatgttttctcgagccatgttggtacatgaacatggacatacacatat 60
           ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttcacatacgagcatgctttctcgagccatgttggtacatgaacatggacatacacatat 683

                                                                       
Query: 61  tcttaggaacaantangaangataaatgganaaggaaaacccaaagcaatgtcagagttg 120
           |||||||||||| || ||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 682 tcttaggaacaaataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttg 623

                                                                       
Query: 121 acaaaactgcaatggcactttatntgt-ggcccatcgtcagtgagctgtttatgccttgc 179
           ||||||||||||||||||||| | | | ||||  |||| ||||||||||||| |||||||
Sbjct: 622 acaaaactgcaatggcacttt-tatataggcctgtcgtgagtgagctgtttaggccttgc 564

                  
Query: 180 cggactc 186
           |||||||
Sbjct: 563 cggactc 557
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>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 816

 Score =  141 bits (71), Expect = 9e-31
 Identities = 165/186 (88%), Gaps = 10/186 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcacatacaagcatgttttctcgagccatgttggtacatgaacatggacatacacatat 60
           ||||||||| |||||| |||||||||| ||||||||||||||||||||   |||||| ||
Sbjct: 706 ttcacatacgagcatgctttctcgagc-atgttggtacatgaacatgggactacacacat 648

                                                                       
Query: 61  tcttaggaacaantangaangataaatgganaaggaaaacccaaagcaatgtcagagttg 120
           | |||||||||| || ||| ||||| |||| ||||||||||  ||||| |||||||||||
Sbjct: 647 t-ttaggaacaa-taagaaagataa-tggagaaggaaaacc--aagca-tgtcagagttg 594

                                                                       
Query: 121 acaaaactgcaatggcactttatntgtggcccatcgtcagtgagctgtttatgccttgcc 180
           ||||| |||||||||||||| || |||| |||||||||||||||||||||||||||||||
Sbjct: 593 acaaa-ctgcaatggcactt-atatgtg-cccatcgtcagtgagctgtttatgccttgcc 537

                 
Query: 181 ggactc 186
            |||||
Sbjct: 536 cgactc 531
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>emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 in linkage group 12,
              complete sequence
          Length = 155592

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 35     gtacatgaacatggacatacaca 57
              |||||||||||||||||||||||
Sbjct: 152158 gtacatgaacatggacatacaca 152136
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>ref|NM_144845.2| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2
           (Ugt3a2), mRNA
          Length = 2197

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 96  aaaacccaaagcaatgtcagagttgacaaa 125
           |||| ||||||||| |||||||||||||||
Sbjct: 869 aaaatccaaagcaaagtcagagttgacaaa 840
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>gb|BC022134.1| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2,
           transcript variant 1, mRNA (cDNA clone MGC:37820
           IMAGE:5098754), complete cds
          Length = 2196

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 96  aaaacccaaagcaatgtcagagttgacaaa 125
           |||| ||||||||| |||||||||||||||
Sbjct: 853 aaaatccaaagcaaagtcagagttgacaaa 824
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>gb|BC034837.1| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2,
           transcript variant 1, mRNA (cDNA clone MGC:37957
           IMAGE:5134131), complete cds
          Length = 2192

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 96  aaaacccaaagcaatgtcagagttgacaaa 125
           |||| ||||||||| |||||||||||||||
Sbjct: 849 aaaatccaaagcaaagtcagagttgacaaa 820
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>dbj|AK143815.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
           library, clone:F430112M20 product:Hypothetical protein
           (Hypothetical UDP-glucoronosyl and UDP-glucosyl
           transferase containing protein), full insert sequence
          Length = 2284

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 96  aaaacccaaagcaatgtcagagttgacaaa 125
           |||| ||||||||| |||||||||||||||
Sbjct: 883 aaaatccaaagcaaagtcagagttgacaaa 854
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>dbj|AK052644.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630011D02 product:HYPOTHETICAL 59.7 KDA
           PROTEIN [Mus musculus]; weakly similar to
           UDP-Glycosyltransferase/glycogen phosphorylase, full
           insert sequence
          Length = 1723

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 96  aaaacccaaagcaatgtcagagttgacaaa 125
           |||| ||||||||| |||||||||||||||
Sbjct: 878 aaaatccaaagcaaagtcagagttgacaaa 849
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>dbj|AK050128.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730018P11 product:hypothetical
           UDP-glucoronosyl and UDP-glucosyl transferase containing
           protein, full insert sequence
          Length = 2197

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 96  aaaacccaaagcaatgtcagagttgacaaa 125
           |||| ||||||||| |||||||||||||||
Sbjct: 869 aaaatccaaagcaaagtcagagttgacaaa 840
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>dbj|AK041045.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530069C13 product:hypothetical
           UDP-Glycosyltransferase/glycogen phosphorylase structure
           containing protein, full insert sequence
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 96  aaaacccaaagcaatgtcagagttgacaaa 125
           |||| ||||||||| |||||||||||||||
Sbjct: 853 aaaatccaaagcaaagtcagagttgacaaa 824
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>emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 on chromosome 10 Contains the
              ZNF37B pseudogene for zinc finger protein 37b (KOX 21), a
              eukaryotic translation initiation factor 3 subunit 6
              interacting protein (EIF3S6IP) pseudogene, the 3' end of
              the ZNF11B gene for zinc finger protein 11b (KOX 2), a
              novel gene (FLJ23327) and two CpG Islands, complete
              sequence
          Length = 146328

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 105    agcaatgtcagagttgacaaa 125
              |||||||||||||||||||||
Sbjct: 137861 agcaatgtcagagttgacaaa 137841
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>gb|L11243.1|RATRSKM2X Rat skeletal muscle voltage-sensitive sodium channel subtype 2
            (rSkM2) gene
          Length = 2825

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 39   atgaacatggacatacacata 59
            |||||||||||||||||||||
Sbjct: 1420 atgaacatggacatacacata 1400
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>gb|AC170993.2| Mus musculus chromosome 1, clone wi1-2059I11, complete sequence
          Length = 41406

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 35    gtacatgaacatggacatacacatattc 62
             ||||||||||||| ||||| ||||||||
Sbjct: 12032 gtacatgaacatgtacatatacatattc 12005
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>gb|AC169498.2| Mus musculus chromosome 1, clone wi1-807J5, complete sequence
          Length = 45765

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 35    gtacatgaacatggacatacacatattc 62
             ||||||||||||| ||||| ||||||||
Sbjct: 41180 gtacatgaacatgtacatatacatattc 41153
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>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
               sequence
          Length = 1178688

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      aaacccaaagcaatgtcaga 116
               ||||||||||||||||||||
Sbjct: 1130897 aaacccaaagcaatgtcaga 1130916
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>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0024K17 map near S16403, complete sequence
          Length = 172238

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 37   acatgaacatggacatacacatat 60
            ||||||||||| ||||||||||||
Sbjct: 4895 acatgaacatgaacatacacatat 4872
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>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
              map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 37     acatgaacatggacatacacatat 60
              ||||||||||| ||||||||||||
Sbjct: 123589 acatgaacatgaacatacacatat 123566
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 37       acatgaacatggacatacacatat 60
                ||||||||||| ||||||||||||
Sbjct: 24888607 acatgaacatgaacatacacatat 24888584
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>ref|XM_572904.1| Cryptococcus neoformans var. neoformans JEC21 protein phosphatase
           (CNI04270) partial mRNA
          Length = 3071

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  aaacccaaagcaatgtcaga 116
           ||||||||||||||||||||
Sbjct: 80  aaacccaaagcaatgtcaga 99
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>emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on chromosome 6, complete
              sequence
          Length = 175757

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    aaaactgcaatggcacttta 142
              ||||||||||||||||||||
Sbjct: 166594 aaaactgcaatggcacttta 166575
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>emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chromosome 1 Contains part of
             the DAB1 gene for disabled homolog 1 (Drosophila),
             complete sequence
          Length = 134011

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 113   cagagttgacaaaactgcaatggc 136
             |||||||||||||||| |||||||
Sbjct: 88758 cagagttgacaaaactacaatggc 88735
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>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence
          Length = 139476

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    atgaacatggacatacacatattc 62
             |||||||||| |||||||||||||
Sbjct: 31202 atgaacatgggcatacacatattc 31225
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>dbj|AK054537.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330038M22
           product:unclassifiable, full insert sequence
          Length = 3845

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 35  gtacatgaacatggacatacacatattc 62
           ||||||||||||| ||||| ||||||||
Sbjct: 695 gtacatgaacatgtacatatacatattc 722
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 37       acatgaacatggacatacacatat 60
                ||||||||||| ||||||||||||
Sbjct: 11682609 acatgaacatgaacatacacatat 11682586



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 37       acatgaacatggacatacacatat 60
                ||||||||||| ||||||||||||
Sbjct: 10428734 acatgaacatgaacatacacatat 10428757
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 37       acatgaacatggacatacacatat 60
                ||||||||||| ||||||||||||
Sbjct: 24979677 acatgaacatgaacatacacatat 24979654
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>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:B1026E06
          Length = 162784

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 37   acatgaacatggacatacacatat 60
            ||||||||||| ||||||||||||
Sbjct: 5348 acatgaacatgaacatacacatat 5371
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>dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0005N06
          Length = 140639

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 37    acatgaacatggacatacacatat 60
             ||||||||||| ||||||||||||
Sbjct: 31151 acatgaacatgaacatacacatat 31128
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>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete
             sequence
          Length = 201821

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    atgaacatggacatacacat 58
             ||||||||||||||||||||
Sbjct: 17489 atgaacatggacatacacat 17470
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>gb|AC170749.6| Mus musculus chromosome 1, clone RP23-322G4, complete sequence
          Length = 208713

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 35    gtacatgaacatggacatacacatattc 62
             ||||||||||||| ||||| ||||||||
Sbjct: 68296 gtacatgaacatgtacatatacatattc 68323
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>gb|AC147806.5| Mus musculus chromosome 1, clone RP23-6O16, complete sequence
          Length = 229200

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    acatgaacatggacataca 55
             |||||||||||||||||||
Sbjct: 50812 acatgaacatggacataca 50794
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>gb|AC129022.5| Mus musculus BAC clone RP23-318P2 from chromosome 12, complete sequence
          Length = 206083

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 97    aaacccaaagcaatgtcag 115
             |||||||||||||||||||
Sbjct: 42496 aaacccaaagcaatgtcag 42478
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>gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome 12, complete sequence
          Length = 239046

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 37     acatgaacatggacatacacata 59
              ||||||||||||||| |||||||
Sbjct: 206760 acatgaacatggacacacacata 206738
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>gb|AC105980.13| Mus musculus chromosome 3, clone RP24-234E11, complete sequence
          Length = 171161

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 37     acatgaacatggacatacacata 59
              |||||||||||||||| ||||||
Sbjct: 118045 acatgaacatggacatgcacata 118023
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>gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome 14, complete sequence
          Length = 209896

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 51     atacacatattcttaggaa 69
              |||||||||||||||||||
Sbjct: 165649 atacacatattcttaggaa 165667
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>gb|AC133103.5| Mus musculus BAC clone RP23-226J10 from chromosome 1, complete sequence
          Length = 241735

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    acatgaacatggacataca 55
             |||||||||||||||||||
Sbjct: 94634 acatgaacatggacataca 94616
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>gb|AC125149.4| Mus musculus BAC clone RP24-354E17 from chromosome 1, complete sequence
          Length = 169725

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     acatgaacatggacataca 55
              |||||||||||||||||||
Sbjct: 163803 acatgaacatggacataca 163785



 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    acatgaacatggacataca 55
             |||||||||||||||||||
Sbjct: 33280 acatgaacatggacataca 33298
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>gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, complete sequence
          Length = 209942

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    aacatggacatacacatat 60
             |||||||||||||||||||
Sbjct: 43743 aacatggacatacacatat 43725
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>gb|AC164544.4| Mus musculus chromosome 1, clone RP24-163G4, complete sequence
          Length = 142689

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     acatgaacatggacataca 55
              |||||||||||||||||||
Sbjct: 126063 acatgaacatggacataca 126081
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>gb|AC110622.6| Mus musculus BAC clone RP23-204H3 from chromosome 8, complete sequence
          Length = 190632

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     acatggacatacacatatt 61
              |||||||||||||||||||
Sbjct: 134610 acatggacatacacatatt 134592
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>gb|AC122321.4| Mus musculus BAC clone RP23-319I22 from chromosome 12, complete
             sequence
          Length = 167106

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 37    acatgaacatggacatacacata 59
             ||||||||||||||| |||||||
Sbjct: 33283 acatgaacatggacacacacata 33261
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>gb|AC109233.10| Mus musculus chromosome 16, clone RP23-219N5, complete sequence
          Length = 271253

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 37     acatgaacatggacatacacata 59
              |||||||||||||||| ||||||
Sbjct: 211558 acatgaacatggacatgcacata 211580
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>gb|AC132050.4| Rattus norvegicus 20 BAC CH230-118G13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 247624

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 28    catgttggtacatgaacatggacatacacat 58
             |||||||||||||| ||||| |||| |||||
Sbjct: 85827 catgttggtacatgcacatgtacatgcacat 85857
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>emb|BX005132.9| Human DNA sequence from clone RP4-603B14 on chromosome 1, complete
             sequence
          Length = 51253

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 102   caaagcaatgtcagagttg 120
             |||||||||||||||||||
Sbjct: 42694 caaagcaatgtcagagttg 42676
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>emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chromosome 1 Contains the 3'
              end of the MGST3 gene for microsomal glutathione
              S-transferase 3, the ALDH9A1 gene for aldehyde
              dehydrogenase 9 family (member A1), a ribosomal protein S13
              (RPS13) pseudogene, a ribosomal protein L21 (RPL21)
              pseudogene, two novel genes (FLJ42974), a carbonic
              anhydrase XIV (CA14) pseudogene, the gene for putative
              membrane protein (LOC54499), a ribosomal protein L26
              (RPL26) pseudogene, the 5' end of (tbc), the 5' end of the
              UMPK gene for uridine monophosphate kinase and two CpG
              islands, complete sequence
          Length = 188217

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 108    aatgtcagagttgacaaaa 126
              |||||||||||||||||||
Sbjct: 115566 aatgtcagagttgacaaaa 115584
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>emb|AL354997.17| Human DNA sequence from clone RP11-309H8 on chromosome 13 Contains two
              novel genes and a novel RING finger protein pseudogene,
              complete sequence
          Length = 156077

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     acatggacatacacatatt 61
              |||||||||||||||||||
Sbjct: 117389 acatggacatacacatatt 117407
to top
>gb|AC157275.2| Mus musculus BAC clone RP24-164M6 from chromosome 12, complete sequence
          Length = 175123

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 92    aaggaaaacccaaagcaatgtca 114
             |||||||||||||||||| ||||
Sbjct: 99058 aaggaaaacccaaagcaaagtca 99036
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>gb|AC104798.4| Homo sapiens BAC clone RP11-328N8 from 4, complete sequence
          Length = 132337

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 37   acatgaacatggacataca 55
            |||||||||||||||||||
Sbjct: 3661 acatgaacatggacataca 3679
to top
>gb|AC140344.3| Mus musculus BAC clone RP23-237M10 from chromosome 12, complete sequence
          Length = 205862

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 37     acatgaacatggacatacacata 59
              ||||||||||| |||||||||||
Sbjct: 118982 acatgaacatgcacatacacata 118960
to top
>gb|AC000067.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 100h In DGCR Region,
             complete sequence
          Length = 40645

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    aaggaaaacccaaagcaat 110
             |||||||||||||||||||
Sbjct: 17806 aaggaaaacccaaagcaat 17824
to top
>ref|XM_624249.1| PREDICTED: Apis mellifera similar to CG3848-PC, isoform C
            (LOC409844), mRNA
          Length = 2950

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 124  aaactgcaatggcacttta 142
            |||||||||||||||||||
Sbjct: 2799 aaactgcaatggcacttta 2781
to top
>emb|BX813738.1|CNS0AC3X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB37ZD07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1401

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 35  gtacatgaacatggacata 53
           |||||||||||||||||||
Sbjct: 329 gtacatgaacatggacata 311
to top
>gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome 8, complete sequence
          Length = 229472

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    acatgaacatggacataca 55
             |||||||||||||||||||
Sbjct: 64791 acatgaacatggacataca 64809
to top
>gb|AC103805.7| Homo sapiens chromosome 18, clone RP11-1061K3, complete sequence
          Length = 184147

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 38    catgaacatggacatacacatat 60
             |||||||||||||||||| ||||
Sbjct: 51514 catgaacatggacatacaaatat 51536
to top
>dbj|AP001930.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-669L23, complete
             sequences
          Length = 167117

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 36    tacatgaacatggacatacacatattc 62
             ||||||| ||||| |||||||||||||
Sbjct: 96316 tacatgatcatggccatacacatattc 96342
to top
>gb|AC147185.2| Mus musculus BAC clone RP24-119J12 from 8, complete sequence
          Length = 164789

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     acatggacatacacatatt 61
              |||||||||||||||||||
Sbjct: 161801 acatggacatacacatatt 161819
to top
>gb|AC145348.3| Mus musculus BAC clone RP23-98E22 from 12, complete sequence
          Length = 183380

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 97     aaacccaaagcaatgtcag 115
              |||||||||||||||||||
Sbjct: 179292 aaacccaaagcaatgtcag 179274
to top
>gb|AC122870.4| Mus musculus BAC clone RP23-103D17 from 3, complete sequence
          Length = 181063

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    acatgaacatggacataca 55
             |||||||||||||||||||
Sbjct: 55429 acatgaacatggacataca 55447
to top
>dbj|AP006708.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09I23, TM0590c,
             complete sequence
          Length = 79353

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    ttttctcgagccatgttgg 35
             |||||||||||||||||||
Sbjct: 14659 ttttctcgagccatgttgg 14641
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>emb|AL627128.16| Mouse DNA sequence from clone RP23-133J9 on chromosome 4, complete
             sequence
          Length = 183089

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    aacatggacatacacatat 60
             |||||||||||||||||||
Sbjct: 57921 aacatggacatacacatat 57903
to top
>emb|AL627103.13| Mouse DNA sequence from clone RP23-414M10 on chromosome 4, complete
             sequence
          Length = 194995

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 38    catgaacatggacatacacatat 60
             |||||||||| ||||||||||||
Sbjct: 65757 catgaacatgcacatacacatat 65735
to top
>emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on chromosome 11, complete
              sequence
          Length = 198761

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 37     acatgaacatggacatacacata 59
              ||||||||||| |||||||||||
Sbjct: 169388 acatgaacatgcacatacacata 169366
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>gb|AC167036.6| Mus musculus chromosome 1, clone RP23-76P9, complete sequence
          Length = 250160

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     acatgaacatggacataca 55
              |||||||||||||||||||
Sbjct: 204453 acatgaacatggacataca 204435
to top
>gb|AC125604.5| Homo sapiens 3 BAC RP11-473P24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 61826

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 162   gagctgtttatgccttgcc 180
             |||||||||||||||||||
Sbjct: 17057 gagctgtttatgccttgcc 17075


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,482,092
Number of Sequences: 3902068
Number of extensions: 1482092
Number of successful extensions: 98539
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98311
Number of HSP's gapped (non-prelim): 225
length of query: 186
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 164
effective length of database: 17,147,199,772
effective search space: 2812140762608
effective search space used: 2812140762608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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