>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac|
          Length = 1120

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 2/96 (2%)
 Frame = -1

Query: 431 ENFPLLYQSMCGVLEDSGARALNSFCGDKAASASLANSLHQFEKVCEDVDRVLRVQENGA 252
           E FP  +     V EDS    LN F G      +   +L +FE + E+V R         
Sbjct: 65  EGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFELMVEEVARNASAVAQNT 124

Query: 251 ATPKEEVVDA--IVEEAKPPQVPPQDAGAVAANGVG 150
           A  K+   DA     EA        D+   A+   G
Sbjct: 125 AAAKKSASDASTSAREAATHAADAADSARAASTSAG 160

>HSP7F_CANGA (Q6FJI3) Heat shock protein homolog SSE1|
          Length = 694

 Score = 32.7 bits (73), Expect = 0.99
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 567 IHILEKCLDIEYAVIKTKTPVPDDLTEQNVPMGHSPAVPDISEVLR 430
           +HI+E+   +E  V+K + P+P+D  E         AVP++ EV +
Sbjct: 489 LHIIEEAYSLEDIVVKEEVPLPEDAPED--------AVPEVKEVTK 526

>RGNEF_MOUSE (P97433) Rho-guanine nucleotide exchange factor (Rho-interacting|
           protein 2) (RhoGEF) (RIP2)
          Length = 1693

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/64 (28%), Positives = 34/64 (53%)
 Frame = -1

Query: 260 NGAATPKEEVVDAIVEEAKPPQVPPQDAGAVAANGVGPSTVKPEDKMEIDG*CVGMKTES 81
           +GAA  +EEV +  +E  + P    +DA ++ +   GPS  + +D++ +D    G+K   
Sbjct: 295 SGAAETEEEVRN--LESGRSPSEEEEDAKSIKSQVDGPSEHEDQDRLALDRSFDGLKKSK 352

Query: 80  KPPS 69
             P+
Sbjct: 353 HVPA 356

>EVX1_HUMAN (P49640) Homeobox even-skipped homolog protein 1 (EVX-1)|
          Length = 407

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = -1

Query: 266 QENGAATPKEEVVDAIVEEAKPPQVPPQDAGAVAANGVGP 147
           +E G   P+EE VD +   A  P   PQ AGA A  G GP
Sbjct: 58  RERGGGGPEEEPVDGLAGSAAGPGAEPQVAGA-AMLGPGP 96

>SRS1_ORYSA (P83649) Salt-stress root protein RS1|
          Length = 204

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = -1

Query: 263 ENGAATPKEEVVDAIVEEAKPPQVPPQDAGAVAANGVGPSTVKPEDKME 117
           E  A T   EV  A+ EE K  +  P +  A AA    PST   E+K E
Sbjct: 141 EAAAETTSREV--AVEEEKKEEEAAPAEPAAAAAEAAAPSTEVVEEKKE 187

>TNNT_DROME (P19351) Troponin T, skeletal muscle (Protein upheld) (Protein|
           intended thorax)
          Length = 397

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 263 ENGAATPKEEVVDAIVEEAKPPQVPPQDAGAVAANGVGPSTVKPEDKMEID 111
           E   ++ +EEVV+   EE KPPQ P +  G        P  +K +D+   D
Sbjct: 5   EEYTSSEEEEVVEETREETKPPQTPAEGEG-------DPEFIKRQDQKRSD 48

>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)|
            (Protein GYMNOS)
          Length = 1384

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 655  STQEVQVNPTSLSQYRDIQRKIVEFIRKK 569
            S    QVN  S+  YRD+QR++VEF++K+
Sbjct: 1153 SADGAQVN--SMFYYRDMQRRLVEFVKKR 1179

>MUCB1_XENLA (P38565) Integumentary mucin B.1 (FIM-B.1) (Fragment)|
          Length = 398

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 513 TPVPDDLTEQNVPMGHSPAVPDISEVLRELPPLV 412
           TP P + T  +VP G S   P  +  LR +PP V
Sbjct: 69  TPAPSETTVPSVPSGESTPAPSETTELRIIPPEV 102

>IF2_LEPIC (Q72NX3) Translation initiation factor IF-2|
          Length = 891

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -1

Query: 254 AATPKEEVVDAIVEEAKPPQVP---PQDAGAVAANGVGPSTVKPEDKMEIDG 108
           AA+PK+E V      +KPP +P   P D+G        PS+  P  + E  G
Sbjct: 56  AASPKKETVAESAPSSKPPVMPLPLPGDSGQSPIVRPAPSSHSPAKREESPG 107

>PACN3_HUMAN (Q9UKS6) Protein kinase C and casein kinase substrate in neurons|
           protein 3 (SH3 domain-containing protein 6511)
           (Endophilin I)
          Length = 424

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -1

Query: 329 LANSLHQFEKVCEDVDRVLRVQENGAATPKEEVVDAIVEEAKPPQVPPQDAGA 171
           +A +  QFE+   D  R +  +E G  +P E  + +IV        PPQ  G+
Sbjct: 292 MAMNWPQFEEWSLDTQRTISRKEKGGRSPDEVTLTSIVPTRDGTAPPPQSPGS 344

>MURG_COXBU (Q820X3) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 358

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = -1

Query: 392 LEDSGARALNSFCGDKAASASLANSLHQFEKVCEDVDRVLRVQENGAATPKEEVVDAIVE 213
           LE +GA  + S       S +  + +  FE+  +D DR+L + EN     K E V  ++ 
Sbjct: 295 LEQAGAAIIIS-----EESLTETDLMRWFEQFAQDRDRLLTMAENARKLAKPEAVQRVIA 349

Query: 212 EAK 204
           + K
Sbjct: 350 QCK 352

>GDIT_MOUSE (Q62160) Rho GDP-dissociation inhibitor 3 (Rho GDI 3) (Rho-GDI|
           gamma) (Rho-GDI2)
          Length = 225

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 281 RVLRVQENGAATPKEEVVDAIVEEAKPP 198
           RVL   ++G +TP +EV+D IV E + P
Sbjct: 24  RVLLADKDGESTPSDEVLDEIVPEYQAP 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,113,518
Number of Sequences: 219361
Number of extensions: 1869734
Number of successful extensions: 6514
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6506
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)