>QORH_ARATH (Q9SV68) Putative chloroplastic quinone-oxidoreductase homolog (EC|
           1.-.-.-)
          Length = 329

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 25/42 (59%), Positives = 29/42 (69%)
 Frame = -2

Query: 168 PLLLSPNKAXLEFLVGLLKEGKLKTVIDSRFPLSDXRQGVAK 43
           PLLL P    LEF+V L+KEGK+KTVIDS+ PLS      AK
Sbjct: 274 PLLLIPKAENLEFMVNLVKEGKVKTVIDSKHPLSKAEDAWAK 315

>QORH_SPIOL (Q8H0M1) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-)|
           (ceQORH)
          Length = 329

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = -2

Query: 168 PLLLSPNKAXLEFLVGLLKEGKLKTVIDSRFPLS 67
           PLLL P     E++V L+KE KLKTVIDS+ PLS
Sbjct: 274 PLLLIPKIPNFEYVVNLVKEKKLKTVIDSKHPLS 307

>RNBP6_HUMAN (O60518) Ran-binding protein 6 (RanBP6)|
          Length = 1105

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -2

Query: 168  PLLLSPNKAXLEFLVGLLKEGKLKTVIDSRFPLSDXRQGVAKQ 40
            P+++ PN + L  ++ ++ EGK+   I+   P +     V +Q
Sbjct: 1033 PVVIGPNNSNLPKIISIIAEGKINETINYEDPCAKRLANVVRQ 1075

>RNBP6_MOUSE (Q8BIV3) Ran-binding protein 6 (RanBP6) (Fragment)|
          Length = 439

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -2

Query: 168 PLLLSPNKAXLEFLVGLLKEGKLKTVIDSRFPLSDXRQGVAKQ 40
           P+++ PN + L  ++ ++ EGK+   I    P +     V +Q
Sbjct: 367 PVVIGPNNSNLPKIISIIAEGKINETISHEDPCAKRLANVVRQ 409

>COKA1_MOUSE (Q923P0) Collagen alpha-1(XX) chain (Fragment)|
          Length = 765

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 160 PVAQQGXPGVLGRAAQGRQAEDGDRLE 80
           P  QQG PG  GRA QG     G + E
Sbjct: 555 PGGQQGSPGTQGRAVQGPMGPPGAKGE 581


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,513,833
Number of Sequences: 219361
Number of extensions: 366148
Number of successful extensions: 1418
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 80,573,946
effective HSP length: 31
effective length of database: 73,773,755
effective search space used: 1770570120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)