ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6b18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predic... 208 2e-50
2dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 2e-50
3dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response fact... 208 2e-50
4gb|AY104007.1| Zea mays PCO114881 mRNA sequence 163 9e-37
5gb|AY104948.1| Zea mays PCO114882 mRNA sequence 149 1e-32
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
7dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
8dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 7e-13
9dbj|AK065254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 7e-13
10dbj|AK060796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 7e-13
11gb|AY104269.1| Zea mays PCO148725 mRNA sequence 70 1e-08
12gb|AY255705.1| Mangifera indica auxin response factor-like prote... 68 4e-08
13gb|DQ340255.1| Lycopersicon esculentum auxin response factor 2 (... 68 4e-08
14dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
16emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa... 60 1e-05
17gb|AY107195.1| Zea mays PCO096052 mRNA sequence 54 6e-04
18ref|NM_001036131.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FA... 48 0.037
19ref|NM_179499.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTO... 48 0.037
20ref|NM_104668.2| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTO... 48 0.037
21gb|AY133723.1| Arabidopsis thaliana auxin response factor 1 (At1... 48 0.037
22gb|BT002748.1| Arabidopsis thaliana clone C105458 auxin response... 48 0.037
23gb|U83245.1|ATU83245 Arabidopsis thaliana auxin response factor ... 48 0.037
24gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome... 44 0.58
25gb|AF140228.2| Oryza sativa (indica cultivar-group) putative aux... 44 0.58
26emb|AJ306306.1|OSA306306 Oryza sativa subsp. japonica mRNA for a... 44 0.58
27gb|DQ340259.1| Lycopersicon esculentum auxin response factor 4 (... 44 0.58
28dbj|AK071997.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.58
29dbj|AK065936.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.58
30gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, comple... 44 0.58
31gb|BT013711.1| Lycopersicon esculentum clone 132555F, mRNA sequence 42 2.3
32gb|AC010196.5| Homo sapiens 12 BAC RP11-202H2 (Roswell Park Canc... 42 2.3
33gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete se... 42 2.3
34ref|NM_001036471.1| Arabidopsis thaliana ARF11 (AUXIN RESPONSE F... 40 9.0
35ref|NM_201972.1| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACT... 40 9.0
36ref|NM_130218.3| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACT... 40 9.0
37gb|CP000097.1| Synechococcus sp. CC9902, complete genome 40 9.0
38ref|XM_474238.1| Oryza sativa (japonica cultivar-group), predic... 40 9.0
39ref|XM_472625.1| Oryza sativa (japonica cultivar-group), predic... 40 9.0
40gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 9.0
41gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 9.0
42gb|AC132260.3| Mus musculus BAC clone RP24-370C1 from chromosome... 40 9.0
43gb|AF186999.4| Homo sapiens chromosome 8 clone CTA-394H5 map 8ce... 40 9.0
44emb|AL096761.1|HS754E20A Human DNA sequence from clone RP4-754E2... 40 9.0
45emb|X59723.1|LMACTPLC L.monocytogenes actA and plcB genes 40 9.0
46gb|AF497179.1| Listeria monocytogenes strain FSLj2003 ActA (actA... 40 9.0
47gb|AF497176.1| Listeria monocytogenes strain FSLj1047 ActA (actA... 40 9.0
48gb|AF497172.1| Listeria monocytogenes strain FSLj1022 ActA (actA... 40 9.0
49emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4,... 40 9.0
50emb|AL591974.1| Listeria monocytogenes strain EGD, complete geno... 40 9.0
51emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BA... 40 9.0
52emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BA... 40 9.0
53gb|AC012153.10| Homo sapiens 11q BAC RP5-1045O21 (Roswell Park C... 40 9.0
54gb|AC103956.4| Homo sapiens chromosome 8, clone CTA-394H5, compl... 40 9.0
55gb|AC011128.7| Homo sapiens chromosome 8, clone RP11-119N19, com... 40 9.0
56gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141... 40 9.0
57dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
58emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4,... 40 9.0
59emb|BX815613.1|CNS0ADXB Arabidopsis thaliana Full-length cDNA Co... 40 9.0
60emb|BX820997.1|CNS0A8K9 Arabidopsis thaliana Full-length cDNA Co... 40 9.0
61gb|AY512495.1| Listeria monocytogenes strain NRRL 33226 prfA vir... 40 9.0
62gb|AY512493.1| Listeria monocytogenes strain NRRL 33223 prfA vir... 40 9.0
63gb|AY512484.1| Listeria monocytogenes strain NRRL 33189 prfA vir... 40 9.0
64gb|AY512417.1| Listeria monocytogenes strain NRRL 33039 prfA vir... 40 9.0
65gb|AY512409.1| Listeria monocytogenes strain NRRL 33031 prfA vir... 40 9.0
66gb|AY512407.1| Listeria monocytogenes strain NRRL 33029 prfA vir... 40 9.0
67gb|AC156022.2| Mus musculus BAC clone RP23-201E13 from chromosom... 40 9.0
68gb|AF281898.1|AF281898 Listeria monocytogenes strain CU-BR1/93 A... 40 9.0
69gb|AF281897.1|AF281897 Listeria monocytogenes strain EGD ActA (a... 40 9.0
70gb|AF281889.1|AF281889 Listeria monocytogenes strain 696073 ActA... 40 9.0
71gb|BT024075.1| Zea mays clone EL01N0510B07 mRNA sequence 40 9.0
72gb|AY669791.1| Arabidopsis thaliana clone C105346 ARF11 (At2g465... 40 9.0
73dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.0
74dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.0
75gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 9.0
76gb|DQ309971.1| Listeria monocytogenes isolate Lm26373 ActA (actA... 40 9.0
77gb|DQ309970.1| Listeria monocytogenes isolate Lm26372 ActA (actA... 40 9.0
78gb|DQ309969.1| Listeria monocytogenes isolate Lm26371 ActA (actA... 40 9.0
79gb|DQ309968.1| Listeria monocytogenes isolate Lm26369 ActA (actA... 40 9.0
80gb|DQ309964.1| Listeria monocytogenes isolate Lm26023 ActA (actA... 40 9.0
81gb|DQ309963.1| Listeria monocytogenes isolate Lm26008 ActA (actA... 40 9.0
82gb|DQ309962.1| Listeria monocytogenes isolate Lm26007 ActA (actA... 40 9.0
83gb|DQ309961.1| Listeria monocytogenes isolate Lm26005 ActA (actA... 40 9.0
84gb|DQ309960.1| Listeria monocytogenes isolate Lm26003 ActA (actA... 40 9.0
85gb|DQ309958.1| Listeria monocytogenes isolate Lm25826 ActA (actA... 40 9.0
86gb|DQ309957.1| Listeria monocytogenes isolate Lm25824 ActA (actA... 40 9.0
87gb|DQ309956.1| Listeria monocytogenes isolate Lm25823 ActA (actA... 40 9.0
88gb|DQ309955.1| Listeria monocytogenes isolate Lm25822 ActA (actA... 40 9.0
89gb|DQ309954.1| Listeria monocytogenes isolate Lm25611 ActA (actA... 40 9.0
90gb|DQ309953.1| Listeria monocytogenes isolate Lm25610 ActA (actA... 40 9.0
91gb|DQ309952.1| Listeria monocytogenes isolate Lm25607 ActA (actA... 40 9.0
92gb|DQ309951.1| Listeria monocytogenes isolate Lm25606 ActA (actA... 40 9.0
93gb|DQ309950.1| Listeria monocytogenes isolate Lm25605 ActA (actA... 40 9.0
94gb|DQ309949.1| Listeria monocytogenes isolate Lm25207 ActA (actA... 40 9.0
95gb|DQ309948.1| Listeria monocytogenes isolate Lm25206 ActA (actA... 40 9.0
96gb|DQ309947.1| Listeria monocytogenes isolate Lm25180 ActA (actA... 40 9.0
97gb|DQ309945.1| Listeria monocytogenes isolate Lm25170 ActA (actA... 40 9.0
98gb|DQ309944.1| Listeria monocytogenes isolate Lm25064 ActA (actA... 40 9.0
99gb|DQ309942.1| Listeria monocytogenes isolate Lm25062 ActA (actA... 40 9.0
100gb|DQ309941.1| Listeria monocytogenes isolate Lm22742 ActA (actA... 40 9.0
101gb|DQ309939.1| Listeria monocytogenes isolate Lm22736 ActA (actA... 40 9.0
102gb|DQ309938.1| Listeria monocytogenes isolate Lm22564 ActA (actA... 40 9.0
103gb|DQ309936.1| Listeria monocytogenes isolate Lm22113 ActA (actA... 40 9.0
104gb|DQ309929.1| Listeria monocytogenes isolate Lm21895 ActA (actA... 40 9.0
105gb|DQ309926.1| Listeria monocytogenes isolate Lm21815 ActA (actA... 40 9.0
106gb|DQ309925.1| Listeria monocytogenes isolate Lm21813 ActA (actA... 40 9.0
107gb|DQ309915.1| Listeria monocytogenes isolate Lm21370 ActA (actA... 40 9.0
108gb|DQ309914.1| Listeria monocytogenes isolate Lm21369 ActA (actA... 40 9.0
109gb|DQ309913.1| Listeria monocytogenes isolate Lm21367 ActA (actA... 40 9.0
110gb|DQ309912.1| Listeria monocytogenes isolate Lm21366 ActA (actA... 40 9.0
111gb|DQ309904.1| Listeria monocytogenes isolate Lm21195 ActA (actA... 40 9.0
112gb|DQ309900.1| Listeria monocytogenes isolate Lm21185 ActA (actA... 40 9.0
113gb|DQ309899.1| Listeria monocytogenes isolate Lm21184 ActA (actA... 40 9.0
114gb|DQ309897.1| Listeria monocytogenes isolate Lm21093 ActA (actA... 40 9.0
115gb|DQ309891.1| Listeria monocytogenes isolate Lm21045 ActA (actA... 40 9.0
116gb|DQ309890.1| Listeria monocytogenes isolate Lm20852 ActA (actA... 40 9.0
117gb|DQ309886.1| Listeria monocytogenes isolate Lm19927 ActA (actA... 40 9.0
118gb|DQ309882.1| Listeria monocytogenes isolate Lm18962 ActA (actA... 40 9.0
119gb|DQ309878.1| Listeria monocytogenes isolate Lm18474 ActA (actA... 40 9.0
120emb|AL671185.8| Mouse DNA sequence from clone RP23-192N1 on chro... 40 9.0
121gb|M82881.1|LISACTLDH Listeria monocytogenes lecithinase, lactat... 40 9.0
122dbj|AB071292.1| Oryza sativa OsMP mRNA for Arabidopsis Monoptero... 40 9.0 
>ref|NM_189992.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2481

 Score =  208 bits (105), Expect = 2e-50
 Identities = 183/209 (87%)
 Strand = Plus / Minus

                                                                        
Query: 451  tgatttcgagttcatcttctggacctcctccttggtgtagatgaagatcttgcgcactat 510
            ||||||||| ||||||||||||||||||||||||||||| ||  | ||||| ||||| ||
Sbjct: 2337 tgatttcgaattcatcttctggacctcctccttggtgtaaatataaatcttccgcacaat 2278

                                                                        
Query: 511  gctgcagaactcctcccatggatcatctcccaccagcatcatgtcaccctcaggatcagt 570
            ||||||||| || |||||||| || ||||| || |||||||| |||||||||  ||||||
Sbjct: 2277 gctgcagaattcttcccatgggtcgtctccaacaagcatcatatcaccctcattatcagt 2218

                                                                        
Query: 571  atacacaatctgccagtctctgtttgaagacatcaattcaccatcaaattcaaacatcct 630
            ||| ||||| ||||||| | |||||||||||| |||||||||||| |||||||||||| |
Sbjct: 2217 ataaacaatttgccagtttttgtttgaagacaccaattcaccatcgaattcaaacatctt 2158

                                         
Query: 631  gtctagctcagcagtgagttcgtcatagt 659
            ||||||||||||  ||||||| |||||||
Sbjct: 2157 gtctagctcagctttgagttcatcatagt 2129
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>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full
            insert sequence
          Length = 3151

 Score =  208 bits (105), Expect = 2e-50
 Identities = 183/209 (87%)
 Strand = Plus / Minus

                                                                        
Query: 451  tgatttcgagttcatcttctggacctcctccttggtgtagatgaagatcttgcgcactat 510
            ||||||||| ||||||||||||||||||||||||||||| ||  | ||||| ||||| ||
Sbjct: 2559 tgatttcgaattcatcttctggacctcctccttggtgtaaatataaatcttccgcacaat 2500

                                                                        
Query: 511  gctgcagaactcctcccatggatcatctcccaccagcatcatgtcaccctcaggatcagt 570
            ||||||||| || |||||||| || ||||| || |||||||| |||||||||  ||||||
Sbjct: 2499 gctgcagaattcttcccatgggtcgtctccaacaagcatcatatcaccctcattatcagt 2440

                                                                        
Query: 571  atacacaatctgccagtctctgtttgaagacatcaattcaccatcaaattcaaacatcct 630
            ||| ||||| ||||||| | |||||||||||| |||||||||||| |||||||||||| |
Sbjct: 2439 ataaacaatttgccagtttttgtttgaagacaccaattcaccatcgaattcaaacatctt 2380

                                         
Query: 631  gtctagctcagcagtgagttcgtcatagt 659
            ||||||||||||  ||||||| |||||||
Sbjct: 2379 gtctagctcagctttgagttcatcatagt 2351
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>dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds
          Length = 2376

 Score =  208 bits (105), Expect = 2e-50
 Identities = 183/209 (87%)
 Strand = Plus / Minus

                                                                        
Query: 451  tgatttcgagttcatcttctggacctcctccttggtgtagatgaagatcttgcgcactat 510
            ||||||||| ||||||||||||||||||||||||||||| ||  | ||||| ||||| ||
Sbjct: 2301 tgatttcgaattcatcttctggacctcctccttggtgtaaatataaatcttccgcacaat 2242

                                                                        
Query: 511  gctgcagaactcctcccatggatcatctcccaccagcatcatgtcaccctcaggatcagt 570
            ||||||||| || |||||||| || ||||| || |||||||| |||||||||  ||||||
Sbjct: 2241 gctgcagaattcttcccatgggtcgtctccaacaagcatcatatcaccctcattatcagt 2182

                                                                        
Query: 571  atacacaatctgccagtctctgtttgaagacatcaattcaccatcaaattcaaacatcct 630
            ||| ||||| ||||||| | |||||||||||| |||||||||||| |||||||||||| |
Sbjct: 2181 ataaacaatttgccagtttttgtttgaagacaccaattcaccatcgaattcaaacatctt 2122

                                         
Query: 631  gtctagctcagcagtgagttcgtcatagt 659
            ||||||||||||  ||||||| |||||||
Sbjct: 2121 gtctagctcagctttgagttcatcatagt 2093
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>gb|AY104007.1| Zea mays PCO114881 mRNA sequence
          Length = 2029

 Score =  163 bits (82), Expect = 9e-37
 Identities = 106/114 (92%)
 Strand = Plus / Minus

                                                                        
Query: 448  ggatgatttcgagttcatcttctggacctcctccttggtgtagatgaagatcttgcgcac 507
            |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 1610 ggatgatttcgagttcatcttctggacctcctccttcgtgtagatgtagatcttgcgcac 1551

                                                                  
Query: 508  tatgctgcagaactcctcccatggatcatctcccaccagcatcatgtcaccctc 561
            |||| |||||||||||||||| || |||||||| || |||||||| ||||||||
Sbjct: 1550 tatgttgcagaactcctcccacgggtcatctccgacaagcatcatatcaccctc 1497
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>gb|AY104948.1| Zea mays PCO114882 mRNA sequence
          Length = 1671

 Score =  149 bits (75), Expect = 1e-32
 Identities = 102/111 (91%)
 Strand = Plus / Minus

                                                                        
Query: 451  tgatttcgagttcatcttctggacctcctccttggtgtagatgaagatcttgcgcactat 510
            ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 1197 tgatttcgagttcatcttctggacctcctccttcgtgtagatgtagatcttgcgcactat 1138

                                                               
Query: 511  gctgcagaactcctcccatggatcatctcccaccagcatcatgtcaccctc 561
            |||||||||||| ||||| || || |||||||| |||||||| || |||||
Sbjct: 1137 gctgcagaactcttcccacgggtcgtctcccacaagcatcatatcgccctc 1087
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  137 bits (69), Expect = 5e-29
 Identities = 120/137 (87%)
 Strand = Plus / Minus

                                                                            
Query: 523      ctcccatggatcatctcccaccagcatcatgtcaccctcaggatcagtatacacaatctg 582
                ||||||||| || ||||| || |||||||| |||||||||  ||||||||| ||||| ||
Sbjct: 40692256 ctcccatgggtcgtctccaacaagcatcatatcaccctcattatcagtataaacaatttg 40692197

                                                                            
Query: 583      ccagtctctgtttgaagacatcaattcaccatcaaattcaaacatcctgtctagctcagc 642
                ||||| | |||||||||||| |||||||||||| |||||||||||| |||||||||||||
Sbjct: 40692196 ccagtttttgtttgaagacaccaattcaccatcgaattcaaacatcttgtctagctcagc 40692137

                                 
Query: 643      agtgagttcgtcatagt 659
                  ||||||| |||||||
Sbjct: 40692136 tttgagttcatcatagt 40692120



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                            
Query: 451      tgatttcgagttcatcttctggacctcctccttggtgtagatgaagatcttgcgcactat 510
                ||||||||| ||||||||||||||||||||||||||||| ||  | ||||| ||||| ||
Sbjct: 40692415 tgatttcgaattcatcttctggacctcctccttggtgtaaatataaatcttccgcacaat 40692356

                         
Query: 511      gctgcagaa 519
                |||||||||
Sbjct: 40692355 gctgcagaa 40692347
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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0093F16
          Length = 160925

 Score =  137 bits (69), Expect = 5e-29
 Identities = 120/137 (87%)
 Strand = Plus / Minus

                                                                          
Query: 523    ctcccatggatcatctcccaccagcatcatgtcaccctcaggatcagtatacacaatctg 582
              ||||||||| || ||||| || |||||||| |||||||||  ||||||||| ||||| ||
Sbjct: 134234 ctcccatgggtcgtctccaacaagcatcatatcaccctcattatcagtataaacaatttg 134175

                                                                          
Query: 583    ccagtctctgtttgaagacatcaattcaccatcaaattcaaacatcctgtctagctcagc 642
              ||||| | |||||||||||| |||||||||||| |||||||||||| |||||||||||||
Sbjct: 134174 ccagtttttgtttgaagacaccaattcaccatcgaattcaaacatcttgtctagctcagc 134115

                               
Query: 643    agtgagttcgtcatagt 659
                ||||||| |||||||
Sbjct: 134114 tttgagttcatcatagt 134098



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                          
Query: 451    tgatttcgagttcatcttctggacctcctccttggtgtagatgaagatcttgcgcactat 510
              ||||||||| ||||||||||||||||||||||||||||| ||  | ||||| ||||| ||
Sbjct: 134393 tgatttcgaattcatcttctggacctcctccttggtgtaaatataaatcttccgcacaat 134334

                       
Query: 511    gctgcagaa 519
              |||||||||
Sbjct: 134333 gctgcagaa 134325
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>dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091D19, full
            insert sequence
          Length = 3265

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 461  ttcatcttctggacctcctccttggtgtagatgaagatcttgcgcactatgctgcagaac 520
            ||||||||||||||||||||| | |||||||||||||| ||  | || ||| ||||||| 
Sbjct: 2691 ttcatcttctggacctcctccctcgtgtagatgaagattttatgaaccatgttgcagaat 2632

                                                      
Query: 521  tcctcccatggatcatctcccaccagcatcatgtcaccctca 562
            || | ||| |||||||| || |||| ||||||||||||||||
Sbjct: 2631 tcattccaaggatcatcaccaaccaacatcatgtcaccctca 2590
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>dbj|AK065254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J11, full
            insert sequence
          Length = 3100

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 461  ttcatcttctggacctcctccttggtgtagatgaagatcttgcgcactatgctgcagaac 520
            ||||||||||||||||||||| | |||||||||||||| ||  | || ||| ||||||| 
Sbjct: 2546 ttcatcttctggacctcctccctcgtgtagatgaagattttatgaaccatgttgcagaat 2487

                                                      
Query: 521  tcctcccatggatcatctcccaccagcatcatgtcaccctca 562
            || | ||| |||||||| || |||| ||||||||||||||||
Sbjct: 2486 tcattccaaggatcatcaccaaccaacatcatgtcaccctca 2445
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>dbj|AK060796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E12, full
            insert sequence
          Length = 1560

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 461  ttcatcttctggacctcctccttggtgtagatgaagatcttgcgcactatgctgcagaac 520
            ||||||||||||||||||||| | |||||||||||||| ||  | || ||| ||||||| 
Sbjct: 1006 ttcatcttctggacctcctccctcgtgtagatgaagattttatgaaccatgttgcagaat 947

                                                      
Query: 521  tcctcccatggatcatctcccaccagcatcatgtcaccctca 562
            || | ||| |||||||| || |||| ||||||||||||||||
Sbjct: 946  tcattccaaggatcatcaccaaccaacatcatgtcaccctca 905
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>gb|AY104269.1| Zea mays PCO148725 mRNA sequence
          Length = 1560

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 469  ctggacctcctccttggtgtagatgaagatcttgcgcactatgctgcagaactcctccca 528
            ||||||||||||| | ||||| | |||||||||| |||| |||||||||||||| | |||
Sbjct: 1022 ctggacctcctccctcgtgtacacgaagatcttgtgcaccatgctgcagaactcattcca 963

                                       
Query: 529  tggatcatctcccaccagcatcatgtc 555
             || || || || ||||||||||||||
Sbjct: 962  ggggtcgtccccgaccagcatcatgtc 936
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>gb|AY255705.1| Mangifera indica auxin response factor-like protein (ARF1) mRNA,
            complete cds
          Length = 3272

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 133/166 (80%)
 Strand = Plus / Minus

                                                                        
Query: 461  ttcatcttctggacctcctccttggtgtagatgaagatcttgcgcactatgctgcagaac 520
            ||||||||||||||||||||  | || ||||| || || ||||| || ||||  || || 
Sbjct: 2693 ttcatcttctggacctcctctcttgtatagataaaaattttgcggaccatgccacaaaat 2634

                                                                        
Query: 521  tcctcccatggatcatctcccaccagcatcatgtcaccctcaggatcagtatacacaatc 580
            |||| ||| ||||||||||| || ||||| ||||||||||||  ||||||||| | ||| 
Sbjct: 2633 tccttccacggatcatctccaacaagcataatgtcaccctcatcatcagtatatataatg 2574

                                                          
Query: 581  tgccagtctctgtttgaagacatcaattcaccatcaaattcaaaca 626
             ||||||   | |||| || ||| | ||||||| ||||||||||||
Sbjct: 2573 agccagttcttttttggagtcattagttcaccaccaaattcaaaca 2528
to top
>gb|DQ340255.1| Lycopersicon esculentum auxin response factor 2 (ARF2) mRNA, complete
            cds
          Length = 2719

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                        
Query: 473  acctcctccttggtgtagatgaagatcttgcgcactatgctgcagaactcctcccatgga 532
            |||||||| || || |||||||| |||||||| || || |  || || |||| |||||||
Sbjct: 2539 acctcctcttttgtatagatgaaaatcttgcgaaccataccacaaaattcctgccatgga 2480

                                          
Query: 533  tcatctcccaccagcatcatgtcaccctca 562
            |||||||| || ||||||||||||||||||
Sbjct: 2479 tcatctccaacaagcatcatgtcaccctca 2450
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 461      ttcatcttctggacctcctccttggtgtagatgaagat 498
                ||||||||||||||||||||| | ||||||||||||||
Sbjct: 17613397 ttcatcttctggacctcctccctcgtgtagatgaagat 17613434



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 530      ggatcatctcccaccagcatcatgtcaccctca 562
                |||||||| || |||| ||||||||||||||||
Sbjct: 17613560 ggatcatcaccaaccaacatcatgtcaccctca 17613592
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 461      ttcatcttctggacctcctccttggtgtagatgaagat 498
                ||||||||||||||||||||| | ||||||||||||||
Sbjct: 17567768 ttcatcttctggacctcctccctcgtgtagatgaagat 17567805



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 530      ggatcatctcccaccagcatcatgtcaccctca 562
                |||||||| || |||| ||||||||||||||||
Sbjct: 17567931 ggatcatcaccaaccaacatcatgtcaccctca 17567963
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>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162200

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 461    ttcatcttctggacctcctccttggtgtagatgaagat 498
              ||||||||||||||||||||| | ||||||||||||||
Sbjct: 105733 ttcatcttctggacctcctccctcgtgtagatgaagat 105770



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 530    ggatcatctcccaccagcatcatgtcaccctca 562
              |||||||| || |||| ||||||||||||||||
Sbjct: 105896 ggatcatcaccaaccaacatcatgtcaccctca 105928
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>gb|AY107195.1| Zea mays PCO096052 mRNA sequence
          Length = 2179

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 512  ctgcagaactcctcccatggatcatctcccaccagcatcatgtcaccctca 562
            ||||| ||||| ||||| ||||||||||| || |||||||||||| |||||
Sbjct: 1425 ctgcaaaactcatcccaaggatcatctccaacaagcatcatgtcatcctca 1375
to top
>ref|NM_001036131.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
            factor AT1G59750 (ARF1) transcript variant AT1G59750.3
            mRNA, complete cds
          Length = 2290

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            ||||||||||| ||||| | ||| || |  |||||||| | |||||||||||| || |||
Sbjct: 1920 gtgtagatgaatatcttcctcaccattccacagaactcattccatggatcatcaccaacc 1861

                        
Query: 545  agcatcatgtca 556
            | ||||||||||
Sbjct: 1860 atcatcatgtca 1849
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>ref|NM_179499.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
            factor AT1G59750 (ARF1) transcript variant AT1G59750.2
            mRNA, complete cds
          Length = 2452

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            ||||||||||| ||||| | ||| || |  |||||||| | |||||||||||| || |||
Sbjct: 2111 gtgtagatgaatatcttcctcaccattccacagaactcattccatggatcatcaccaacc 2052

                        
Query: 545  agcatcatgtca 556
            | ||||||||||
Sbjct: 2051 atcatcatgtca 2040
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>ref|NM_104668.2| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
            factor AT1G59750 (ARF1) transcript variant AT1G59750.1
            mRNA, complete cds
          Length = 2470

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            ||||||||||| ||||| | ||| || |  |||||||| | |||||||||||| || |||
Sbjct: 2120 gtgtagatgaatatcttcctcaccattccacagaactcattccatggatcatcaccaacc 2061

                        
Query: 545  agcatcatgtca 556
            | ||||||||||
Sbjct: 2060 atcatcatgtca 2049
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>gb|AY133723.1| Arabidopsis thaliana auxin response factor 1 (At1g59750) mRNA,
            complete cds
          Length = 2464

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            ||||||||||| ||||| | ||| || |  |||||||| | |||||||||||| || |||
Sbjct: 2113 gtgtagatgaatatcttcctcaccattccacagaactcattccatggatcatcaccaacc 2054

                        
Query: 545  agcatcatgtca 556
            | ||||||||||
Sbjct: 2053 atcatcatgtca 2042
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>gb|BT002748.1| Arabidopsis thaliana clone C105458 auxin response factor 1
            (At1g59750) mRNA, complete cds
          Length = 2029

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            ||||||||||| ||||| | ||| || |  |||||||| | |||||||||||| || |||
Sbjct: 1868 gtgtagatgaatatcttcctcaccattccacagaactcattccatggatcatcaccaacc 1809

                        
Query: 545  agcatcatgtca 556
            | ||||||||||
Sbjct: 1808 atcatcatgtca 1797
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>gb|U83245.1|ATU83245 Arabidopsis thaliana auxin response factor 1 (ARF1) mRNA, complete
            cds
          Length = 2332

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            ||||||||||| ||||| | ||| || |  |||||||| | |||||||||||| || |||
Sbjct: 1982 gtgtagatgaatatcttcctcaccattccacagaactcattccatggatcatcaccaacc 1923

                        
Query: 545  agcatcatgtca 556
            | ||||||||||
Sbjct: 1922 atcatcatgtca 1911
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>gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome 3, complete sequence
          Length = 226878

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 260    acttcattggctggctggctgg 281
              ||||||||||||||||||||||
Sbjct: 188998 acttcattggctggctggctgg 188977
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>gb|AF140228.2| Oryza sativa (indica cultivar-group) putative auxin response factor 1
            mRNA, partial cds
          Length = 2574

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            |||||||||||||||||| | || |||  |||||| ||   ||| |||||||| || || 
Sbjct: 2429 gtgtagatgaagatcttgtgaaccatgtcgcagaattcaatccagggatcatccccaact 2370

                          
Query: 545  agcatcatgtcacc 558
            ||||||||||||||
Sbjct: 2369 agcatcatgtcacc 2356
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>emb|AJ306306.1|OSA306306 Oryza sativa subsp. japonica mRNA for auxin response factor 1 (arf1
            gene)
          Length = 2511

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            |||||||||||||||||| | || |||  |||||| ||   ||| |||||||| || || 
Sbjct: 2366 gtgtagatgaagatcttgtgaaccatgtcgcagaattcaatccagggatcatccccaact 2307

                          
Query: 545  agcatcatgtcacc 558
            ||||||||||||||
Sbjct: 2306 agcatcatgtcacc 2293
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>gb|DQ340259.1| Lycopersicon esculentum auxin response factor 4 (ARF4) mRNA, complete
            cds
          Length = 2454

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 515  cagaactcctcccatggatcatctcccaccagcatcatgtca 556
            |||||||| | ||||||||||||||| || | ||||||||||
Sbjct: 2272 cagaactcatgccatggatcatctccgacaaccatcatgtca 2231
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>dbj|AK071997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091N24, full
            insert sequence
          Length = 3981

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            |||||||||||||||||| | || |||  |||||| ||   ||| |||||||| || || 
Sbjct: 3457 gtgtagatgaagatcttgtgaaccatgtcgcagaattcaatccagggatcatccccaact 3398

                          
Query: 545  agcatcatgtcacc 558
            ||||||||||||||
Sbjct: 3397 agcatcatgtcacc 3384
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>dbj|AK065936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045A03, full
            insert sequence
          Length = 3338

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            |||||||||||||||||| | || |||  |||||| ||   ||| |||||||| || || 
Sbjct: 2725 gtgtagatgaagatcttgtgaaccatgtcgcagaattcaatccagggatcatccccaact 2666

                          
Query: 545  agcatcatgtcacc 558
            ||||||||||||||
Sbjct: 2665 agcatcatgtcacc 2652
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>gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, complete sequence
          Length = 215121

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 260   acttcattggctggctggctgg 281
             ||||||||||||||||||||||
Sbjct: 18232 acttcattggctggctggctgg 18253
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>gb|BT013711.1| Lycopersicon esculentum clone 132555F, mRNA sequence
          Length = 2825

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 509  atgctgcagaactcctcccatggatcatctcccaccagcatcatgtcaccctc 561
            ||||||||||| || | |||||| || ||||| |||| |||||||||| ||||
Sbjct: 2202 atgctgcagaattcatgccatgggtcgtctccaaccatcatcatgtcatcctc 2150
to top
>gb|AC010196.5| Homo sapiens 12 BAC RP11-202H2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163246

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 583    ccagtctctgtttgaagacat 603
              |||||||||||||||||||||
Sbjct: 116207 ccagtctctgtttgaagacat 116187
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>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence
          Length = 129513

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 526   ccatggatcatctcccaccagcatcatgtcaccctca 562
             ||||||||| || || || ||||||||||||||||||
Sbjct: 47264 ccatggatcgtcgccaacaagcatcatgtcaccctca 47300
to top
>ref|NM_001036471.1| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACTOR 11); transcription
            factor AT2G46530 (ARF11) transcript variant AT2G46530.3
            mRNA, complete cds
          Length = 2171

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 515  cagaactcctcccatggatcatctcccaccagcatc 550
            |||||||| | ||||||||||||||| || ||||||
Sbjct: 1742 cagaactcattccatggatcatctcctacaagcatc 1707
to top
>ref|NM_201972.1| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACTOR 11); transcription
            factor AT2G46530 (ARF11) transcript variant AT2G46530.2
            mRNA, complete cds
          Length = 2413

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 515  cagaactcctcccatggatcatctcccaccagcatc 550
            |||||||| | ||||||||||||||| || ||||||
Sbjct: 1984 cagaactcattccatggatcatctcctacaagcatc 1949
to top
>ref|NM_130218.3| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACTOR 11); transcription
            factor AT2G46530 (ARF11) transcript variant AT2G46530.1
            mRNA, complete cds
          Length = 2425

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 515  cagaactcctcccatggatcatctcccaccagcatc 550
            |||||||| | ||||||||||||||| || ||||||
Sbjct: 1996 cagaactcattccatggatcatctcctacaagcatc 1961
to top
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 429     cttcttcctttcttggggtggatg 452
               ||||||||||| ||||||||||||
Sbjct: 1219334 cttcttcctttattggggtggatg 1219357
to top
>ref|XM_474238.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2865

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 521  tcctcccatggatcatctcc 540
            ||||||||||||||||||||
Sbjct: 2759 tcctcccatggatcatctcc 2740
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>ref|XM_472625.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5022

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 523  ctcccatggatcatctcccaccagcatcatgtcaccctca 562
            |||||| |||||||| || || |||||||||||| |||||
Sbjct: 1479 ctcccaaggatcatccccgacaagcatcatgtcatcctca 1440
to top
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 608    tcaccatcaaattcaaacat 627
              ||||||||||||||||||||
Sbjct: 471040 tcaccatcaaattcaaacat 471021
to top
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 608    tcaccatcaaattcaaacat 627
              ||||||||||||||||||||
Sbjct: 471083 tcaccatcaaattcaaacat 471064
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>gb|AC132260.3| Mus musculus BAC clone RP24-370C1 from chromosome 13, complete sequence
          Length = 160903

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   gaaccttcttcctttcttgg 444
             ||||||||||||||||||||
Sbjct: 44673 gaaccttcttcctttcttgg 44692
to top
>gb|AF186999.4| Homo sapiens chromosome 8 clone CTA-394H5 map 8cen, complete sequence
          Length = 82674

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    tcttaactgccaagagcaag 93
             ||||||||||||||||||||
Sbjct: 21677 tcttaactgccaagagcaag 21696
to top
>emb|AL096761.1|HS754E20A Human DNA sequence from clone RP4-754E20 on chromosome 22q13.2,
             complete sequence
          Length = 65201

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   agttatctaaatggcttgac 382
             ||||||||||||||||||||
Sbjct: 27957 agttatctaaatggcttgac 27976
to top
>emb|X59723.1|LMACTPLC L.monocytogenes actA and plcB genes
          Length = 3031

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1243 ggatgatttctagttcatcttctg 1220
to top
>gb|AF497179.1| Listeria monocytogenes strain FSLj2003 ActA (actA) gene, complete
           cds
          Length = 1815

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 448 ggatgatttcgagttcatcttctg 471
           |||||||||| |||||||||||||
Sbjct: 937 ggatgatttctagttcatcttctg 914
to top
>gb|AF497176.1| Listeria monocytogenes strain FSLj1047 ActA (actA) gene, complete cds
          Length = 1920

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1042 ggatgatttctagttcatcttctg 1019
to top
>gb|AF497172.1| Listeria monocytogenes strain FSLj1022 ActA (actA) gene, complete cds
          Length = 1920

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1042 ggatgatttctagttcatcttctg 1019
to top
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete
             sequence
          Length = 121130

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 523   ctcccatggatcatctcccaccagcatcatgtcaccctca 562
             |||||| |||||||| || || |||||||||||| |||||
Sbjct: 85363 ctcccaaggatcatccccgacaagcatcatgtcatcctca 85324
to top
>emb|AL591974.1| Listeria monocytogenes strain EGD, complete genome, segment 2/12
          Length = 160050

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 448   ggatgatttcgagttcatcttctg 471
             |||||||||| |||||||||||||
Sbjct: 10511 ggatgatttctagttcatcttctg 10488
to top
>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22
          Length = 100028

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 604   caattcaccatcaaattcaa 623
             ||||||||||||||||||||
Sbjct: 17099 caattcaccatcaaattcaa 17080
to top
>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6
          Length = 93443

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 604   caattcaccatcaaattcaa 623
             ||||||||||||||||||||
Sbjct: 78816 caattcaccatcaaattcaa 78797
to top
>gb|AC012153.10| Homo sapiens 11q BAC RP5-1045O21 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 120628

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  ggctggctggctgggacccg 287
            ||||||||||||||||||||
Sbjct: 4560 ggctggctggctgggacccg 4579
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>gb|AC103956.4| Homo sapiens chromosome 8, clone CTA-394H5, complete sequence
          Length = 82676

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    tcttaactgccaagagcaag 93
             ||||||||||||||||||||
Sbjct: 21678 tcttaactgccaagagcaag 21697
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>gb|AC011128.7| Homo sapiens chromosome 8, clone RP11-119N19, complete sequence
          Length = 183978

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     tcttaactgccaagagcaag 93
              ||||||||||||||||||||
Sbjct: 174439 tcttaactgccaagagcaag 174420
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>gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141J21 containing NRXN2 (NRXN2)
              gene, partial cds; and RST and OAT4 genes, complete cds,
              complete sequence
          Length = 170114

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    ggctggctggctgggacccg 287
              ||||||||||||||||||||
Sbjct: 115106 ggctggctggctgggacccg 115125
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 523      ctcccatggatcatctcccaccagcatcatgtcaccctca 562
                |||||| |||||||| || || |||||||||||| |||||
Sbjct: 22019441 ctcccaaggatcatccccgacaagcatcatgtcatcctca 22019402
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>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20,
             complete sequence
          Length = 99855

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 523   ctcccatggatcatctcccaccagcatcatgtcaccctca 562
             |||||| |||||||| || || |||||||||||| |||||
Sbjct: 92012 ctcccaaggatcatccccgacaagcatcatgtcatcctca 91973
to top
>emb|BX815613.1|CNS0ADXB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS78ZB02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2327

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatcatctcccacc 544
            ||||||||||| ||||| | ||| || |  |||||||| | |||||| ||||| || |||
Sbjct: 1980 gtgtagatgaatatcttcctcaccattccacagaactcattccatgggtcatcaccaacc 1921

                        
Query: 545  agcatcatgtca 556
            | ||||||||||
Sbjct: 1920 atcatcatgtca 1909
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>emb|BX820997.1|CNS0A8K9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH8ZD01 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1552

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 515  cagaactcctcccatggatcatctcccaccagcatc 550
            |||||||| | ||||||||||||||| || ||||||
Sbjct: 1122 cagaactcattccatggatcatctcctacaagcatc 1087
to top
>gb|AY512495.1| Listeria monocytogenes strain NRRL 33226 prfA virulence gene cluster,
            partial sequence
          Length = 8643

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 6860 ggatgatttctagttcatcttctg 6837
to top
>gb|AY512493.1| Listeria monocytogenes strain NRRL 33223 prfA virulence gene cluster,
            partial sequence
          Length = 8643

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 6860 ggatgatttctagttcatcttctg 6837
to top
>gb|AY512484.1| Listeria monocytogenes strain NRRL 33189 prfA virulence gene cluster,
            partial sequence
          Length = 8644

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 6860 ggatgatttctagttcatcttctg 6837
to top
>gb|AY512417.1| Listeria monocytogenes strain NRRL 33039 prfA virulence gene cluster,
            partial sequence
          Length = 8643

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 6860 ggatgatttctagttcatcttctg 6837
to top
>gb|AY512409.1| Listeria monocytogenes strain NRRL 33031 prfA virulence gene cluster,
            partial sequence
          Length = 8643

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 6860 ggatgatttctagttcatcttctg 6837
to top
>gb|AY512407.1| Listeria monocytogenes strain NRRL 33029 prfA virulence gene cluster,
            partial sequence
          Length = 8642

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 6860 ggatgatttctagttcatcttctg 6837
to top
>gb|AC156022.2| Mus musculus BAC clone RP23-201E13 from chromosome 5, complete sequence
          Length = 225445

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   atcaccaaaagacatcagga 256
             ||||||||||||||||||||
Sbjct: 39119 atcaccaaaagacatcagga 39100
to top
>gb|AF281898.1|AF281898 Listeria monocytogenes strain CU-BR1/93 ActA (actA) gene, actA-3
           allele, complete cds
          Length = 1815

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 448 ggatgatttcgagttcatcttctg 471
           |||||||||| |||||||||||||
Sbjct: 937 ggatgatttctagttcatcttctg 914
to top
>gb|AF281897.1|AF281897 Listeria monocytogenes strain EGD ActA (actA) gene, complete cds
          Length = 1920

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1042 ggatgatttctagttcatcttctg 1019
to top
>gb|AF281889.1|AF281889 Listeria monocytogenes strain 696073 ActA (actA) gene, actA-3
           allele, partial cds
          Length = 473

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 448 ggatgatttcgagttcatcttctg 471
           |||||||||| |||||||||||||
Sbjct: 163 ggatgatttctagttcatcttctg 140
to top
>gb|BT024075.1| Zea mays clone EL01N0510B07 mRNA sequence
          Length = 2624

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                        
Query: 476  tcctccttggtgtagatgaagatcttgcgcactatgctgcagaactcctcccatggatca 535
            |||||| | |||||||||||||||||| | || |||   |||||||| | ||| || || 
Sbjct: 2095 tcctcccttgtgtagatgaagatcttgtggaccatgtcacagaactcattccaggggtcg 2036

                                
Query: 536  tctcccaccagcatcatgtc 555
            || || ||||||||||||||
Sbjct: 2035 tcgccgaccagcatcatgtc 2016
to top
>gb|AY669791.1| Arabidopsis thaliana clone C105346 ARF11 (At2g46530) mRNA, complete
            cds
          Length = 1900

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 515  cagaactcctcccatggatcatctcccaccagcatc 550
            |||||||| | ||||||||||||||| || ||||||
Sbjct: 1742 cagaactcattccatggatcatctcctacaagcatc 1707
to top
>dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727K3, complete
             sequence
          Length = 160739

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   ggctggctggctgggacccg 287
             ||||||||||||||||||||
Sbjct: 45822 ggctggctggctgggacccg 45803
to top
>dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-128H22, complete
             sequence
          Length = 169259

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   ggctggctggctgggacccg 287
             ||||||||||||||||||||
Sbjct: 84977 ggctggctggctgggacccg 84958
to top
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 608    tcaccatcaaattcaaacat 627
              ||||||||||||||||||||
Sbjct: 471040 tcaccatcaaattcaaacat 471021
to top
>gb|DQ309971.1| Listeria monocytogenes isolate Lm26373 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309970.1| Listeria monocytogenes isolate Lm26372 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309969.1| Listeria monocytogenes isolate Lm26371 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309968.1| Listeria monocytogenes isolate Lm26369 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309964.1| Listeria monocytogenes isolate Lm26023 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309963.1| Listeria monocytogenes isolate Lm26008 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309962.1| Listeria monocytogenes isolate Lm26007 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309961.1| Listeria monocytogenes isolate Lm26005 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309960.1| Listeria monocytogenes isolate Lm26003 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309958.1| Listeria monocytogenes isolate Lm25826 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309957.1| Listeria monocytogenes isolate Lm25824 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309956.1| Listeria monocytogenes isolate Lm25823 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309955.1| Listeria monocytogenes isolate Lm25822 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309954.1| Listeria monocytogenes isolate Lm25611 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309953.1| Listeria monocytogenes isolate Lm25610 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309952.1| Listeria monocytogenes isolate Lm25607 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309951.1| Listeria monocytogenes isolate Lm25606 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309950.1| Listeria monocytogenes isolate Lm25605 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309949.1| Listeria monocytogenes isolate Lm25207 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309948.1| Listeria monocytogenes isolate Lm25206 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309947.1| Listeria monocytogenes isolate Lm25180 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309945.1| Listeria monocytogenes isolate Lm25170 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309944.1| Listeria monocytogenes isolate Lm25064 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309942.1| Listeria monocytogenes isolate Lm25062 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309941.1| Listeria monocytogenes isolate Lm22742 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309939.1| Listeria monocytogenes isolate Lm22736 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309938.1| Listeria monocytogenes isolate Lm22564 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309936.1| Listeria monocytogenes isolate Lm22113 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309929.1| Listeria monocytogenes isolate Lm21895 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309926.1| Listeria monocytogenes isolate Lm21815 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309925.1| Listeria monocytogenes isolate Lm21813 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309915.1| Listeria monocytogenes isolate Lm21370 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309914.1| Listeria monocytogenes isolate Lm21369 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
to top
>gb|DQ309913.1| Listeria monocytogenes isolate Lm21367 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>gb|DQ309912.1| Listeria monocytogenes isolate Lm21366 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>gb|DQ309904.1| Listeria monocytogenes isolate Lm21195 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>gb|DQ309900.1| Listeria monocytogenes isolate Lm21185 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>gb|DQ309899.1| Listeria monocytogenes isolate Lm21184 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>gb|DQ309897.1| Listeria monocytogenes isolate Lm21093 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>gb|DQ309891.1| Listeria monocytogenes isolate Lm21045 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>gb|DQ309890.1| Listeria monocytogenes isolate Lm20852 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>gb|DQ309886.1| Listeria monocytogenes isolate Lm19927 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>gb|DQ309882.1| Listeria monocytogenes isolate Lm18962 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>gb|DQ309878.1| Listeria monocytogenes isolate Lm18474 ActA (actA) gene, complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1050 ggatgatttctagttcatcttctg 1027
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>emb|AL671185.8| Mouse DNA sequence from clone RP23-192N1 on chromosome X, complete
              sequence
          Length = 229574

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     gccaagagcaagcaaaccag 101
              ||||||||||||||||||||
Sbjct: 207832 gccaagagcaagcaaaccag 207851
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>gb|M82881.1|LISACTLDH Listeria monocytogenes lecithinase, lactate dehydrogenase (actA) gene
            complete cds, (plcB) gene complete cds, (ldh) gene
            complete cds
          Length = 5648

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  ggatgatttcgagttcatcttctg 471
            |||||||||| |||||||||||||
Sbjct: 1269 ggatgatttctagttcatcttctg 1246
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>dbj|AB071292.1| Oryza sativa OsMP mRNA for Arabidopsis Monopteros-like protein,
            complete cds
          Length = 2868

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 521  tcctcccatggatcatctcc 540
            ||||||||||||||||||||
Sbjct: 2762 tcctcccatggatcatctcc 2743


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,224,380
Number of Sequences: 3902068
Number of extensions: 5224380
Number of successful extensions: 111219
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 110862
Number of HSP's gapped (non-prelim): 355
length of query: 660
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 637
effective length of database: 17,143,297,704
effective search space: 10920280637448
effective search space used: 10920280637448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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