>RL18_ARATH (P42791) 60S ribosomal protein L18|
          Length = 187

 Score =  262 bits (669), Expect = 7e-70
 Identities = 131/163 (80%), Positives = 144/163 (88%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGT 455
           LKL VKLYRFLVRRT S FN VILKRLFMSK N+ PLS+ RL  FM GKE+K IAV+VGT
Sbjct: 26  LKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDK-IAVLVGT 84

Query: 454 ITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNA 275
           ITDD+R+ EIPAMKVTALRFTE ARARI  AGGECLTFDQLALRAP G+NT+LLRGPKN+
Sbjct: 85  ITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNS 144

Query: 274 REXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 146
           RE V+HFG APGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV
Sbjct: 145 REAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV 187

>RL18_CICAR (O65729) 60S ribosomal protein L18 (Fragment)|
          Length = 183

 Score =  252 bits (644), Expect = 6e-67
 Identities = 128/163 (78%), Positives = 142/163 (87%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGT 455
           LKLLVKLYRFLVRRT S FNAVILKRLFMSK NRPPLS+ RL  +M+GKE K I VVVG 
Sbjct: 23  LKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQGKEGK-IGVVVGA 81

Query: 454 ITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNA 275
           +TDD+R+ ++P +KVTAL+FTETARARI  AGGECLTFDQLALR P  + T+LLRGPKNA
Sbjct: 82  VTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPLTD-TVLLRGPKNA 140

Query: 274 REXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 146
           RE V+HFG APGVPHSHTKPYVRSKGRKFEKARGRR SRGF+V
Sbjct: 141 REAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFRV 183

>RL18_HUMAN (Q07020) 60S ribosomal protein L18|
          Length = 187

 Score =  226 bits (577), Expect = 3e-59
 Identities = 115/164 (70%), Positives = 133/164 (81%), Gaps = 2/164 (1%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVV 461
           L+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPPLS+ R+   MK  G+E K  AVVV
Sbjct: 24  LRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKT-AVVV 82

Query: 460 GTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPK 281
           GTITDD+R+QE+P +KV ALR T  AR+RI+ AGG+ LTFDQLAL +P G  T+LL GP+
Sbjct: 83  GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 142

Query: 280 NAREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 149
             RE  RHFGKAPG PHSHTKPYVRSKGRKFE+ARGRR SRG+K
Sbjct: 143 KGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 186

>RL18_RAT (P12001) 60S ribosomal protein L18|
          Length = 187

 Score =  225 bits (573), Expect = 1e-58
 Identities = 114/164 (69%), Positives = 132/164 (80%), Gaps = 2/164 (1%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVV 461
           L+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPPLS+ R+   MK  G+E K  AVVV
Sbjct: 24  LRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKT-AVVV 82

Query: 460 GTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPK 281
           GTITDD+RI E+P +KV ALR +  AR+RI+ AGG+ LTFDQLAL +P G  T+LL GP+
Sbjct: 83  GTITDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPR 142

Query: 280 NAREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 149
             RE  RHFGKAPG PHSHTKPYVRSKGRKFE+ARGRR SRG+K
Sbjct: 143 KGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 186

>RL18_MOUSE (P35980) 60S ribosomal protein L18|
          Length = 187

 Score =  224 bits (572), Expect = 1e-58
 Identities = 113/164 (68%), Positives = 132/164 (80%), Gaps = 2/164 (1%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVV 461
           L+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPPLS+ R+   MK  G+E K  AVVV
Sbjct: 24  LRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKT-AVVV 82

Query: 460 GTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPK 281
           GT+TDD+RI E+P +KV ALR +  AR+RI+ AGG+ LTFDQLAL +P G  T+LL GP+
Sbjct: 83  GTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPR 142

Query: 280 NAREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 149
             RE  RHFGKAPG PHSHTKPYVRSKGRKFE+ARGRR SRG+K
Sbjct: 143 KGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 186

>RL18_ICTPU (Q90YV0) 60S ribosomal protein L18|
          Length = 187

 Score =  221 bits (564), Expect = 1e-57
 Identities = 113/164 (68%), Positives = 132/164 (80%), Gaps = 2/164 (1%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVV 461
           L+LLVKLYRFL RR+ + FN V+LKRLFMSKTNRPPL++ RL   MK  G+E K IAVVV
Sbjct: 24  LRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRPPLALSRLIRKMKLQGRENK-IAVVV 82

Query: 460 GTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPK 281
           GTITDD+RI  IP +KV ALR T  AR RI+ AGG+ +TFDQLA+  P G+ T+LL GP+
Sbjct: 83  GTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQVMTFDQLAVTTPKGQGTVLLSGPR 142

Query: 280 NAREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 149
            ARE  RHFGKAPG PHSHTKPY+RSKGRKFE+ARGRR SRG+K
Sbjct: 143 KAREVYRHFGKAPGTPHSHTKPYIRSKGRKFERARGRRASRGYK 186

>RL18_ORENI (P69091) 60S ribosomal protein L18|
          Length = 187

 Score =  221 bits (563), Expect = 1e-57
 Identities = 110/164 (67%), Positives = 135/164 (82%), Gaps = 2/164 (1%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVV 461
           L+LLVKLYRFL RR+ + FN V+L+RLFMS+TNRPP+++ RL   MK  G+E K IAVVV
Sbjct: 24  LRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRPPIAVSRLIRKMKLPGRENK-IAVVV 82

Query: 460 GTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPK 281
           GT+TDD+RIQ+IP +K+ ALR T+ AR RI+ AGG+ +TFDQLAL +P G+ T+LL GP+
Sbjct: 83  GTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQVMTFDQLALASPKGQGTVLLSGPR 142

Query: 280 NAREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 149
            ARE  RHFGKAPG PHSHTKPYVRSKGRKFE+ARGRR S G+K
Sbjct: 143 KAREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASCGYK 186

>RL18_OREMO (P69090) 60S ribosomal protein L18|
          Length = 187

 Score =  221 bits (563), Expect = 1e-57
 Identities = 110/164 (67%), Positives = 135/164 (82%), Gaps = 2/164 (1%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVV 461
           L+LLVKLYRFL RR+ + FN V+L+RLFMS+TNRPP+++ RL   MK  G+E K IAVVV
Sbjct: 24  LRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRPPIAVSRLIRKMKLPGRENK-IAVVV 82

Query: 460 GTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPK 281
           GT+TDD+RIQ+IP +K+ ALR T+ AR RI+ AGG+ +TFDQLAL +P G+ T+LL GP+
Sbjct: 83  GTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQVMTFDQLALASPKGQGTVLLSGPR 142

Query: 280 NAREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 149
            ARE  RHFGKAPG PHSHTKPYVRSKGRKFE+ARGRR S G+K
Sbjct: 143 KAREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASCGYK 186

>RL18B_XENLA (P02412) 60S ribosomal protein L18-B (L14B)|
          Length = 187

 Score =  220 bits (561), Expect = 2e-57
 Identities = 113/164 (68%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVV 461
           L+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPPLSM RL   MK  G+E K  AVVV
Sbjct: 24  LRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPPLSMSRLIRKMKLQGRENKT-AVVV 82

Query: 460 GTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPK 281
           G ITDD+RI +IP +KV AL+ T   R+RI+ +GG+ +TFDQLAL AP G+NT+LL GP+
Sbjct: 83  GYITDDVRIHDIPKLKVCALKITSGDRSRILKSGGQIMTFDQLALAAPKGQNTVLLSGPR 142

Query: 280 NAREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 149
            ARE  RHFGKAPG PHS TKPYV SKGRKFE+ARGRR SRG+K
Sbjct: 143 KAREVYRHFGKAPGTPHSRTKPYVLSKGRKFERARGRRASRGYK 186

>RL18A_XENLA (P09897) 60S ribosomal protein L18-A (L14A)|
          Length = 187

 Score =  216 bits (550), Expect = 5e-56
 Identities = 110/163 (67%), Positives = 127/163 (77%), Gaps = 1/163 (0%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMK-GKEEKNIAVVVG 458
           L+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPPLSM RL   MK  + E   AVVVG
Sbjct: 24  LRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPPLSMSRLIRKMKLPRRENKTAVVVG 83

Query: 457 TITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKN 278
            IT D+RI +IP + V AL+ T  AR+RI+ AGG+ +TFDQLAL AP G+NT+LL GP+ 
Sbjct: 84  CITADVRIHDIPKLTVCALKLTSGARSRILKAGGQIMTFDQLALAAPKGQNTVLLSGPRK 143

Query: 277 AREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 149
           ARE  RHFGKAP  PHS TKPYV SKGRKFE+ARGRR SRG+K
Sbjct: 144 AREVYRHFGKAPSTPHSRTKPYVLSKGRKFERARGRRASRGYK 186

>RL18B_SCHPO (Q8TFH1) 60S ribosomal protein L18-B|
          Length = 187

 Score =  204 bits (519), Expect = 2e-52
 Identities = 106/166 (63%), Positives = 123/166 (74%), Gaps = 3/166 (1%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKE---EKNIAVV 464
           LKLLVKLYRFL RRT S FN  ILKRLF SKTNRPP+S+ +++     K    E    V+
Sbjct: 25  LKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASLEGKTTVI 84

Query: 463 VGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGP 284
           VGT+TDD R+  +P + V ALRFT++ARARI+ AGGE LT DQLALRAPTG NT+LLRG 
Sbjct: 85  VGTVTDDERLLTVPKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGK 144

Query: 283 KNAREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 146
           K+ARE  RHFG     PH H  PYVRS+GRKFE+ARGRR SR FKV
Sbjct: 145 KHAREAYRHFGFG---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187

>RL18A_SCHPO (Q10192) 60S ribosomal protein L18-A|
          Length = 187

 Score =  202 bits (514), Expect = 7e-52
 Identities = 104/166 (62%), Positives = 123/166 (74%), Gaps = 3/166 (1%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKE---EKNIAVV 464
           LKLLVKLYRFL RRT S FN  ILKRLF SKTNRPP+S+ +++     K    +    VV
Sbjct: 25  LKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASSQNKTTVV 84

Query: 463 VGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGP 284
           VGT+TDD R+  +P + + ALRFT++ARARI+ AGGE LT DQLALRAPTG NT+L+RG 
Sbjct: 85  VGTVTDDERMLTVPKLSIAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLVRGK 144

Query: 283 KNAREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 146
           K+ARE  RHFG     PH H  PYVRS+GRKFE+ARGRR SR FKV
Sbjct: 145 KHAREAYRHFGFG---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187

>RL18_YEAST (P07279) 60S ribosomal protein L18 (RP28)|
          Length = 186

 Score =  194 bits (492), Expect = 2e-49
 Identities = 100/164 (60%), Positives = 121/164 (73%), Gaps = 1/164 (0%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKN-IAVVVG 458
           LKLLVKLY FL RRT + FN V+LK LF+SK NRPP+S+ R++  +K +   N   VVVG
Sbjct: 26  LKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTVVVVG 85

Query: 457 TITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKN 278
           T+TDD RI E P   V ALRFT  ARA+IV AGGEC+T DQLA+RAP G+NT++LRGP+N
Sbjct: 86  TVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRN 145

Query: 277 AREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 146
           +RE VRHFG     PH    P + S GRKFE+ARGRR S+GFKV
Sbjct: 146 SREAVRHFGMG---PHKGKAPRILSTGRKFERARGRRRSKGFKV 186

>RL18_TRYBB (P50885) 60S ribosomal protein L18|
          Length = 193

 Score =  171 bits (433), Expect = 2e-42
 Identities = 87/165 (52%), Positives = 123/165 (74%), Gaps = 7/165 (4%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLS-------MRRLSNFMKGKEEKN 476
           +KLL+KLY+FL +RT S FN +I KRL  S+ NR P+S       MRR + ++K  ++  
Sbjct: 26  IKLLIKLYKFLGKRTNSPFNKLIHKRLLKSRNNRAPISLSRIAVCMRRRTVWLKKGKKSP 85

Query: 475 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 296
           IAV+VG + DD+R+  IPA+++ ALRF+++AR RI  AGGECLTFDQLA+ APTG+NT+L
Sbjct: 86  IAVIVGDVLDDVRMTRIPALRICALRFSKSARERITGAGGECLTFDQLAMMAPTGKNTML 145

Query: 295 LRGPKNAREXVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNS 161
           LRG K+ RE V+HFG A GVP SH KP+V S+G++ +++  RR++
Sbjct: 146 LRGRKSGRESVKHFG-AAGVPGSHAKPHVSSRGKERQRSSKRRHA 189

>RL18_SALSA (P24558) 60S ribosomal protein L18|
          Length = 179

 Score =  125 bits (315), Expect = 8e-29
 Identities = 72/147 (48%), Positives = 99/147 (67%), Gaps = 3/147 (2%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSX-FNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVV 464
           + LLVK+YR    +  +  FN V+L+RLFMS+T+RPP+S+ R+   MK  G+E +  AVV
Sbjct: 23  ITLLVKIYRLPGSKCSTAPFNKVVLRRLFMSRTHRPPMSVSRMIRKMKLPGRENRT-AVV 81

Query: 463 VGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGP 284
           VGT+TDD+RI EIP +KV+AL+ T   R RI+    + + F  LAL AP  + ++LL  P
Sbjct: 82  VGTVTDDVRIHEIPNLKVSALKITRRNRTRILKF-VQIMRFVGLALAAPNRQKSVLLSAP 140

Query: 283 KNAREXVRHFGKAPGVPHSHTKPYVRS 203
           +NAR+  RHF  AP +P  HTKPYV S
Sbjct: 141 RNARDVSRHFANAPSIP--HTKPYVLS 165

>RL18_PIG (Q95342) 60S ribosomal protein L18 (Fragment)|
          Length = 103

 Score =  102 bits (253), Expect = 1e-21
 Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVV 461
           L+LLVKL RFL RRT S FN V+LKRLFMS+TNRPPLS+ R+   MK  G+E K  AVVV
Sbjct: 24  LRLLVKLXRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMXRKMKLPGREGKT-AVVV 82

Query: 460 GTITDDMRIQEIPAMKVTALR 398
           GTITDD+R QE+P +KV ALR
Sbjct: 83  GTITDDVRFQEVPKLKVCALR 103

>RL18E_PYRAB (Q9V197) 50S ribosomal protein L18e|
          Length = 120

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 32/114 (28%), Positives = 59/114 (51%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGT 455
           L+ L++  R      K      I  RL   +  R  +++ R++ + K   + ++ VV G+
Sbjct: 11  LRRLIRYLRKKSNEEKVKIWKDIAWRLERPRRQRAEVNVSRINRYAK---DGDMIVVPGS 67

Query: 454 ITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 293
           +    +I++   + V A +F+ETAR +I  AGGE +T ++L  R P G   I++
Sbjct: 68  VLGAGKIEK--KVIVAAWKFSETARRKIEEAGGEAITIEELIKRNPKGSGVIIM 119

>RL18E_PYRHO (O59302) 50S ribosomal protein L18e|
          Length = 120

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
 Frame = -3

Query: 625 LVKLYRFLVRRTKSXFNAV---ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGT 455
           L +L RFL +++      +   +  RL   +  R  +++ +++ + K   + ++ VV G+
Sbjct: 11  LRRLIRFLKKKSNEEGVKIWKDLAWRLERPRRQRAEVNVSKINRYAK---DGDMIVVPGS 67

Query: 454 ITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 293
           +    ++++   + V A +F+ETAR +I  AGGE +T ++L  R P G   I++
Sbjct: 68  VLGAGKLEK--KVIVAAWKFSETARKKITEAGGEAITIEELIERNPKGSGVIIM 119

>RL18E_PYRFU (Q8U0E5) 50S ribosomal protein L18e|
          Length = 120

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
 Frame = -3

Query: 625 LVKLYRFLVRRTKSXFNAVILK----RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVG 458
           L +L R+L R+  + +   I K    RL   +  R  +++ +++ +    E   + VV G
Sbjct: 11  LRRLIRYL-RKKSNEYGVKIWKDVAWRLERPRRQRAEVNVSKINRYANDGE---MIVVPG 66

Query: 457 TITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 293
           ++    ++++   + V A +F+ETAR +I+ AGGE +T ++L  R PTG    ++
Sbjct: 67  SVLGAGKLEK--KVIVAAWKFSETARRKIIEAGGEAITIEELIERNPTGSGVRIM 119

>RL18E_PYRKO (Q5JJF5) 50S ribosomal protein L18e|
          Length = 121

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 24/89 (26%), Positives = 50/89 (56%)
 Frame = -3

Query: 559 RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETAR 380
           RL   +  R  +++ +++ + K   E ++ +V G++    R++    + V A +F+E AR
Sbjct: 37  RLERPRRQRAEVNISKINRYTK---EGDVVIVPGSVLGAGRLEH--KVVVAAWKFSEAAR 91

Query: 379 ARIVNAGGECLTFDQLALRAPTGENTILL 293
            +I+ AGGE ++ ++L  R P G   I++
Sbjct: 92  RKIIEAGGEAISIEELMERNPKGSGVIIM 120

>RL18E_METTH (O26145) 50S ribosomal protein L18e|
          Length = 121

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
 Frame = -3

Query: 625 LVKLYRFLVRRTKSXFNAV---ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAV---V 464
           L+KL R L +++     A+   + +RL     NR  +++ +++      E++ + V   V
Sbjct: 12  LIKLIRNLRKKSSQEGAAIWKDVARRLERPTRNRAAVNISKINRH--SDEDETVLVPGKV 69

Query: 463 VGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGEN 305
           +G+   D R+Q      V AL F++TAR +I  AGGECLT  ++    P  +N
Sbjct: 70  LGSGNLDHRVQ------VVALSFSQTARDKIERAGGECLTLGKIVEENPAIKN 116

>RL18E_METJA (P54022) 50S ribosomal protein L18e|
          Length = 121

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 25/92 (27%), Positives = 49/92 (53%)
 Frame = -3

Query: 568 ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTE 389
           I +RL   +  R  +++ +++ + K   E ++ +V G +    +++    + V A  F+E
Sbjct: 34  IARRLAKPRRRRAEVNLSKINRYTK---EGDVVLVPGKVLGAGKLEH--KVVVAAFAFSE 88

Query: 388 TARARIVNAGGECLTFDQLALRAPTGENTILL 293
           TA+  I  AGGE +T ++L  R P G N  ++
Sbjct: 89  TAKKLIKEAGGEAITIEELIKRNPKGSNVKIM 120

>RL18E_METKA (Q8TVB7) 50S ribosomal protein L18e|
          Length = 127

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = -3

Query: 568 ILKRLFMSKTNRPPLSMRRLSNFMKGK--EEKNIAVVVGTITDDMRIQEIPAMKVTALRF 395
           + +RL   +  R  +++ +L    +    +E+   +V G +  D  I +   ++V A RF
Sbjct: 35  VAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ--PLRVAAWRF 92

Query: 394 TETARARIVNAGGECLTFDQLALRAPTG 311
           + TAR +I  AGGECLT  +L    P G
Sbjct: 93  SRTARMKIEAAGGECLTIRELLEENPEG 120

>RL18E_ARCFU (O29138) 50S ribosomal protein L18e|
          Length = 117

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 24/92 (26%), Positives = 44/92 (47%)
 Frame = -3

Query: 568 ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTE 389
           + +RL   +  +  +++ ++  + K  E     VV G +     I +   +KV AL F+E
Sbjct: 30  VAERLAKPRRLQAEVNVSKIEKYAKPNE---YVVVPGKVLGSGSITK--PVKVAALSFSE 84

Query: 388 TARARIVNAGGECLTFDQLALRAPTGENTILL 293
            A ++I  AGG C+  ++L    P G    L+
Sbjct: 85  KAASKIREAGGVCMKIEELLKENPKGSGVRLM 116

>RL18E_METMP (Q6LXM7) 50S ribosomal protein L18e|
          Length = 120

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 412 VTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 293
           V A  F+ETA++ I   GG+CLT ++L    P G    ++
Sbjct: 80  VAAFSFSETAKSAIEAVGGKCLTIEELIAENPKGSKVTIM 119

>RL18E_PYRAE (Q8ZYQ2) 50S ribosomal protein L18e|
          Length = 122

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 24/108 (22%), Positives = 52/108 (48%)
 Frame = -3

Query: 634 LKLLVKLYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGT 455
           L++L +  R   R   +    V+ + +   +  R  +++ +L+   K   E ++ VV G 
Sbjct: 13  LRMLARFLRKAARANSASIWRVVAEFVEKPRRQRVIVNVGKLNRVAK---EGDVVVVPGK 69

Query: 454 ITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTG 311
           +    ++ +   + V A++ +  A  +++ AGGE LT  +L  + P G
Sbjct: 70  LLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRG 115

>RL18E_METMA (Q8PW46) 50S ribosomal protein L18e|
          Length = 126

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 22/93 (23%), Positives = 45/93 (48%)
 Frame = -3

Query: 568 ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTE 389
           I KRL     N   +++ +++   +   E ++ +V G +     +     + V A+ F+E
Sbjct: 39  IAKRLEAPSRNYAAVNISKIN---RHTAENDVLLVPGKVLGAGLLDH--PVTVAAVTFSE 93

Query: 388 TARARIVNAGGECLTFDQLALRAPTGENTILLR 290
           +A  +I  AGG+CL+ +++    P G    + R
Sbjct: 94  SAVEKITEAGGKCLSVEEIMEANPKGSGIRIFR 126

>RL18E_METAC (Q8TT44) 50S ribosomal protein L18e|
          Length = 126

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -3

Query: 412 VTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLR 290
           + AL F+++A  +I  AGG+CL+ +++    P G    + R
Sbjct: 86  IAALTFSDSAFEKITEAGGKCLSLEEIMEANPKGSGIRIFR 126

>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2|
          Length = 954

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 26/82 (31%), Positives = 35/82 (42%)
 Frame = +1

Query: 127 NQKGQLKP*SHGCSSYHEPSQTSYPWSAHRAWCGCAAHQEPCRSASPXHGHSWVPSTGSC 306
           N KG  KP          P+  S P S   +    AA   P R ASP   H   P+ G+ 
Sbjct: 54  NAKGDSKP-----VQQRRPAAPSAPASTSSSAPTPAA---PARQASPASAHQQAPTPGAP 105

Query: 307 SPQLEHGEQAGQK*GTPHQH*Q 372
           +P+ + G + G    TP +H Q
Sbjct: 106 TPRPQGGARPGMP--TPGRHGQ 125

>MURD_RHILO (Q98KB1) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 466

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = -3

Query: 388 TARARIVNAGGECLTFDQ----LALRAPTGENTILLRGPKNAREXVRHFGKAPGVPHSHT 221
           TARA ++  G + L +D     +A  A TG  T  LRG   A+     F  +PGVP +H 
Sbjct: 24  TARA-LIEGGAQVLAWDDNPDSVAKAAATGIATADLRGADWAKFSA--FVLSPGVPLTHP 80

Query: 220 KPY 212
           KP+
Sbjct: 81  KPH 83

>AMPA_CLOPE (Q8XHI3) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 493

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
 Frame = -3

Query: 616 LYRFLVRRTKSXFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIA---VVVGTITD 446
           +Y FLV+++K      +L   F  KTN P   +    N +K KE+   +   +   T T 
Sbjct: 1   MYNFLVKKSKCTETDALLIPYFEEKTNIPNEEINNKINILKKKEQFKGSYGEIFNITRTT 60

Query: 445 DMRIQEIPAMKVTALRFTETARARIVNAGGECL 347
           D  IQ+I  + +   + TE  + +I  A G+ +
Sbjct: 61  DDNIQDIILLGLG--KETEITKEKIRRAFGKAV 91

>RL18E_THEAC (Q9HL06) 50S ribosomal protein L18e|
          Length = 120

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/74 (27%), Positives = 38/74 (51%)
 Frame = -3

Query: 511 LSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQL 332
           LS   K  ++ +I VV G +    +I +   + V A +F++TA  ++ N+G   +   ++
Sbjct: 49  LSKIDKYAKDGDIIVVPGYVLGVGKISK--KVTVGAYKFSKTAMEKLSNSGCAFMNISEI 106

Query: 331 ALRAPTGENTILLR 290
           A   P G N  ++R
Sbjct: 107 AKDNPKGTNVKIMR 120

>PACC_GIBFU (Q8J1U9) pH-response transcription factor pacC/RIM101|
          Length = 618

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 226 GCAAHQEPCRSASPXHGHSWVPSTGSCSPQLEHGEQA 336
           G  A   P  S S   GHS  PS+ + SPQ  HG  A
Sbjct: 416 GTPAVTPPSSSMSYTSGHSPSPSSSAMSPQSRHGSTA 452

>PACC_GIBMO (Q873X0) pH-response transcription factor pacC/RIM101|
          Length = 613

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 226 GCAAHQEPCRSASPXHGHSWVPSTGSCSPQLEHGEQA 336
           G  A   P  S S   GHS  PS+ + SPQ  HG  A
Sbjct: 411 GTPAVTPPSSSMSYTSGHSPSPSSSAMSPQSRHGSTA 447

>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 815

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
 Frame = +1

Query: 142 LKP*SHGCSSYHEPSQTSY---PWSAHRAWCGCAAHQEPCRSASPXHGHSWVPSTGSCSP 312
           + P S  C +      TS+   P +  R+WC      EPC             ST SC  
Sbjct: 644 MTPSSAACRTCWAACATSWCRTPSTTPRSWCSTPTRMEPCGRRCSTTPSCRRRSTWSCRL 703

Query: 313 QLEHGEQAGQ 342
             EH   AGQ
Sbjct: 704 CAEHLRGAGQ 713

>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101|
          Length = 621

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +1

Query: 160 GCSSYHEPSQTSYPWSAHRAWC--GCAAHQEPCRSASPXHGHSWVPSTGSCSPQLEHGEQ 333
           G   YH+P   +   S   A    G  A   P  + S   GHS  PS  + SPQ  H   
Sbjct: 380 GPDGYHQPVSAATMASPLTAMSSTGTPAVTPPSSAVSYTSGHSPSPSAPAMSPQSRHSST 439

Query: 334 AG 339
           +G
Sbjct: 440 SG 441

>SSH1_HUMAN (Q8WYL5) Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC|
           3.1.3.16) (SSH-1L) (hSSH-1L)
          Length = 1049

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 614 LPFPGEEDQEXVQRRHPQ-EALHEQDQPPAALHAPSLQ 504
           LP P +E    V    P+ EAL E+  PPA +H P+ Q
Sbjct: 519 LPSPEDETGSLVHLEDPEREALLEEAAPPAEVHRPARQ 556

>NPDC1_MOUSE (Q64322) Neural proliferation differentiation and control protein 1|
           precursor (NPDC-1 protein)
          Length = 332

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/86 (27%), Positives = 31/86 (36%)
 Frame = +3

Query: 216 GLVWLCGTPGALPKCLTXSRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILALAVSV 395
           GL    GT   +P     SRA  GP+      P G         RH      +L LA  +
Sbjct: 149 GLPSTHGTSSPIPHTSLSSRASSGPVQMSPLEPQG---------RHGNGLTLVLILAFCL 199

Query: 396 NLRAVTFIAGISWIRMSSVIVPTTTA 473
              A   +A + W R+   I  T  A
Sbjct: 200 ASSAALAVAALCWCRLQREIRLTQKA 225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,309,671
Number of Sequences: 219361
Number of extensions: 1747276
Number of successful extensions: 5804
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 5489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5773
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)