| Clone Name | rbaal6b07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104916.1| Zea mays PCO092703 mRNA sequence Length = 852 Score = 339 bits (171), Expect = 7e-90 Identities = 351/411 (85%) Strand = Plus / Minus Query: 248 aagatcagatatgatgttggatgccatagatgtcagcttcttcccggtctgcccagccat 307 |||||||| ||||||||||||||||| ||||||| | | ||||| || | ||| ||||| Sbjct: 597 aagatcagtgatgatgttggatgccatcgatgtcaaccttttcccagtttcccctgccat 538 Query: 308 gctcttgagagaggtcaagtcctgagtggcctggaaggagattctgttgatcaaatccga 367 | |||||||||| | || || |||||||||||||| || ||||||||||||||||| || Sbjct: 537 gttcttgagagaagacagatcttgagtggcctggaatgatattctgttgatcaaatctga 478 Query: 368 agcactcagatcggcattagaattgttcgcttgttggccaaacagatcagcacttgaaat 427 |||||| ||||| | |||||||||| ||| | |||||||| |||||||||||||| || Sbjct: 477 agcactgagatccacgctagaattgtttgctggatggccaaatagatcagcacttgatat 418 Query: 428 ggcagaggatccagagaatttttggagcgagatttgaccctccttttctaaattggcttg 487 ||||||||| ||||| || |||||||| |||| |||| |||||||| ||| |||| || Sbjct: 417 ggcagaggaaccagaaaacttttggagagagacttgagtgtccttttcgaaactggcctg 358 Query: 488 atcaccgaaaaactgagaagatgaaatagactttgcatttgagaacttctgtcttgcttc 547 |||||| ||||||||||| |||||||| || |||||||| ||||| |||||||||||||| Sbjct: 357 atcaccaaaaaactgagaggatgaaattgattttgcattcgagaatttctgtcttgcttc 298 Query: 548 actactttcctcaacctgcattttggatgaaccagaagtagatttcttgtgatatccact 607 ||| |||||||||| ||||| ||||||||||| || |||||||| |||||||||||||| Sbjct: 297 actgctttcctcaatctgcactttggatgaactggatgtagattttttgtgatatccact 238 Query: 608 gtccatcccgtattcaccaaaaaagtttgaagactttgggggcgcaacatg 658 ||||||||| ||||| |||| ||||| || ||||||||||| |||||||| Sbjct: 237 gtccatcccaaattcaacaaagaagttcgatgactttgggggtgcaacatg 187
>gb|BT024178.1| Zea mays clone EL01N0419D11 mRNA sequence Length = 1758 Score = 335 bits (169), Expect = 1e-88 Identities = 343/401 (85%) Strand = Plus / Minus Query: 258 atgatgttggatgccatagatgtcagcttcttcccggtctgcccagccatgctcttgaga 317 ||||||||||||||||| ||||||| | | ||||| || | ||| |||||| |||||||| Sbjct: 1347 atgatgttggatgccatcgatgtcaaccttttcccagtttcccctgccatgttcttgaga 1288 Query: 318 gaggtcaagtcctgagtggcctggaaggagattctgttgatcaaatccgaagcactcaga 377 || | || || |||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 1287 gaagacagatcttgagtggcctggaatgatattctgttgatcaaatctgaagcactgaga 1228 Query: 378 tcggcattagaattgttcgcttgttggccaaacagatcagcacttgaaatggcagaggat 437 || | |||||||||| ||| | |||||||| |||||||||||||| ||||||||||| Sbjct: 1227 tccacgctagaattgtttgctggatggccaaatagatcagcacttgatatggcagaggaa 1168 Query: 438 ccagagaatttttggagcgagatttgaccctccttttctaaattggcttgatcaccgaaa 497 ||||| || |||||||| |||| |||| |||||||| ||| |||| |||||||| ||| Sbjct: 1167 ccagaaaacttttggagagagacttgagtgtccttttcgaaactggcctgatcaccaaaa 1108 Query: 498 aactgagaagatgaaatagactttgcatttgagaacttctgtcttgcttcactactttcc 557 |||||||| |||||||| || |||||||| ||||| ||||||||||||||||| |||||| Sbjct: 1107 aactgagaggatgaaattgattttgcattcgagaatttctgtcttgcttcactgctttcc 1048 Query: 558 tcaacctgcattttggatgaaccagaagtagatttcttgtgatatccactgtccatcccg 617 |||| ||||| ||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 1047 tcaatctgcactttggatgaactggatgtagattttttgtgatatccactgtccatccca 988 Query: 618 tattcaccaaaaaagtttgaagactttgggggcgcaacatg 658 ||||| |||| ||||| || ||||||||||| |||||||| Sbjct: 987 aattcaacaaagaagttcgatgactttgggggtgcaacatg 947
>ref|NM_197867.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0003O19.4), mRNA Length = 1224 Score = 309 bits (156), Expect = 6e-81 Identities = 351/416 (84%) Strand = Plus / Minus Query: 248 aagatcagatatgatgttggatgccatagatgtcagcttcttcccggtctgcccagccat 307 ||||||||| |||||||| ||||||| |||||||| ||||||||| || | ||||||||| Sbjct: 1206 aagatcagacatgatgttcgatgccaaagatgtcaacttcttcccagtttccccagccat 1147 Query: 308 gctcttgagagaggtcaagtcctgagtggcctggaaggagattctgttgatcaaatccga 367 | |||||| ||| | || ||||| | |||||||| || | | |||||||||||| || Sbjct: 1146 gttcttgatagaagacagatcctgggaagcctggaaagaaagccggttgatcaaatctga 1087 Query: 368 agcactcagatcggcattagaattgttcgcttgttggccaaacagatcagcacttgaaat 427 |||||||||||| | || ||| | || | | | || ||||| ||||||||||||||||| Sbjct: 1086 agcactcagatccacgttggaactattggttggatgaccaaatagatcagcacttgaaat 1027 Query: 428 ggcagaggatccagagaatttttggagcgagatttgaccctccttttctaaattggcttg 487 |||||| ||||| || || |||||||| || | |||| |||||||||| ||| |||| || Sbjct: 1026 ggcagaagatcccgaaaacttttggagggaaacttgagcctccttttcaaaactggcctg 967 Query: 488 atcaccgaaaaactgagaagatgaaatagactttgcatttgagaacttctgtcttgcttc 547 || || |||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 966 gtctccaaaaaactgagaagatgaaattgactttgcatttgaaaacttctgtcttgcttc 907 Query: 548 actactttcctcaacctgcattttggatgaaccagaagtagatttcttgtgatatccact 607 ||||||||| |||| ||||| |||||||| |||| | |||||| |||||||||||||| Sbjct: 906 actactttcttcaatctgcactttggatgggccaggggcagattttttgtgatatccact 847 Query: 608 gtccatcccgtattcaccaaaaaagtttgaagactttgggggcgcaacatgcccaa 663 ||||||||| |||| ||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 846 gtccatcccaaattcgccaaagaagtttgaagattttgggggcgcaacatgtccaa 791
>dbj|AK072719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138B10, full insert sequence Length = 1709 Score = 309 bits (156), Expect = 6e-81 Identities = 351/416 (84%) Strand = Plus / Minus Query: 248 aagatcagatatgatgttggatgccatagatgtcagcttcttcccggtctgcccagccat 307 ||||||||| |||||||| ||||||| |||||||| ||||||||| || | ||||||||| Sbjct: 1349 aagatcagacatgatgttcgatgccaaagatgtcaacttcttcccagtttccccagccat 1290 Query: 308 gctcttgagagaggtcaagtcctgagtggcctggaaggagattctgttgatcaaatccga 367 | |||||| ||| | || ||||| | |||||||| || | | |||||||||||| || Sbjct: 1289 gttcttgatagaagacagatcctgggaagcctggaaagaaagccggttgatcaaatctga 1230 Query: 368 agcactcagatcggcattagaattgttcgcttgttggccaaacagatcagcacttgaaat 427 |||||||||||| | || ||| | || | | | || ||||| ||||||||||||||||| Sbjct: 1229 agcactcagatccacgttggaactattggttggatgaccaaatagatcagcacttgaaat 1170 Query: 428 ggcagaggatccagagaatttttggagcgagatttgaccctccttttctaaattggcttg 487 |||||| ||||| || || |||||||| || | |||| |||||||||| ||| |||| || Sbjct: 1169 ggcagaagatcccgaaaacttttggagggaaacttgagcctccttttcaaaactggcctg 1110 Query: 488 atcaccgaaaaactgagaagatgaaatagactttgcatttgagaacttctgtcttgcttc 547 || || |||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1109 gtctccaaaaaactgagaagatgaaattgactttgcatttgaaaacttctgtcttgcttc 1050 Query: 548 actactttcctcaacctgcattttggatgaaccagaagtagatttcttgtgatatccact 607 ||||||||| |||| ||||| |||||||| |||| | |||||| |||||||||||||| Sbjct: 1049 actactttcttcaatctgcactttggatgggccaggggcagattttttgtgatatccact 990 Query: 608 gtccatcccgtattcaccaaaaaagtttgaagactttgggggcgcaacatgcccaa 663 ||||||||| |||| ||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 989 gtccatcccaaattcgccaaagaagtttgaagattttgggggcgcaacatgtccaa 934
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 125 bits (63), Expect = 2e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 447 ttttggagcgagatttgaccctccttttctaaattggcttgatcaccgaaaaactgagaa 506 |||||||| || | |||| |||||||||| ||| |||| || || || |||||||||||| Sbjct: 22317630 ttttggagggaaacttgagcctccttttcaaaactggcctggtctccaaaaaactgagaa 22317689 Query: 507 gatgaaatagactttgcatttgagaacttctgtcttgcttcactactttcctcaa 561 |||||||| |||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 22317690 gatgaaattgactttgcatttgaaaacttctgtcttgcttcactactttcttcaa 22317744 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 561 acctgcattttggatgaaccagaagtagatttcttgtgatatccactgtccatcccgtat 620 ||||||| |||||||| |||| | |||||| ||||||||||||||||||||||| || Sbjct: 22318496 acctgcactttggatgggccaggggcagattttttgtgatatccactgtccatcccaaat 22318555 Query: 621 tcaccaaaaaagtttgaagactttgggggcgcaacatgcccaa 663 || ||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 22318556 tcgccaaagaagtttgaagattttgggggcgcaacatgtccaa 22318598 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 353 gttgatcaaatccgaagcactcagatcggcattagaattgttcgcttgttggccaaacag 412 |||||||||||| |||||||||||||| | || ||| | || | | | || ||||| || Sbjct: 22317242 gttgatcaaatctgaagcactcagatccacgttggaactattggttggatgaccaaatag 22317301 Query: 413 atcagcacttgaaatggcagaggatcc 439 ||||||||||||||||||||| ||||| Sbjct: 22317302 atcagcacttgaaatggcagaagatcc 22317328 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 atttgaccctccttttctaaa 479 ||||||||||||||||||||| Sbjct: 18659524 atttgaccctccttttctaaa 18659504
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 125 bits (63), Expect = 2e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 447 ttttggagcgagatttgaccctccttttctaaattggcttgatcaccgaaaaactgagaa 506 |||||||| || | |||| |||||||||| ||| |||| || || || |||||||||||| Sbjct: 134873 ttttggagggaaacttgagcctccttttcaaaactggcctggtctccaaaaaactgagaa 134932 Query: 507 gatgaaatagactttgcatttgagaacttctgtcttgcttcactactttcctcaa 561 |||||||| |||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 134933 gatgaaattgactttgcatttgaaaacttctgtcttgcttcactactttcttcaa 134987 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 561 acctgcattttggatgaaccagaagtagatttcttgtgatatccactgtccatcccgtat 620 ||||||| |||||||| |||| | |||||| ||||||||||||||||||||||| || Sbjct: 135739 acctgcactttggatgggccaggggcagattttttgtgatatccactgtccatcccaaat 135798 Query: 621 tcaccaaaaaagtttgaagactttgggggcgcaacatgcccaa 663 || ||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 135799 tcgccaaagaagtttgaagattttgggggcgcaacatgtccaa 135841 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 353 gttgatcaaatccgaagcactcagatcggcattagaattgttcgcttgttggccaaacag 412 |||||||||||| |||||||||||||| | || ||| | || | | | || ||||| || Sbjct: 134485 gttgatcaaatctgaagcactcagatccacgttggaactattggttggatgaccaaatag 134544 Query: 413 atcagcacttgaaatggcagaggatcc 439 ||||||||||||||||||||| ||||| Sbjct: 134545 atcagcacttgaaatggcagaagatcc 134571
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 125 bits (63), Expect = 2e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 447 ttttggagcgagatttgaccctccttttctaaattggcttgatcaccgaaaaactgagaa 506 |||||||| || | |||| |||||||||| ||| |||| || || || |||||||||||| Sbjct: 22329698 ttttggagggaaacttgagcctccttttcaaaactggcctggtctccaaaaaactgagaa 22329757 Query: 507 gatgaaatagactttgcatttgagaacttctgtcttgcttcactactttcctcaa 561 |||||||| |||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 22329758 gatgaaattgactttgcatttgaaaacttctgtcttgcttcactactttcttcaa 22329812 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 561 acctgcattttggatgaaccagaagtagatttcttgtgatatccactgtccatcccgtat 620 ||||||| |||||||| |||| | |||||| ||||||||||||||||||||||| || Sbjct: 22330564 acctgcactttggatgggccaggggcagattttttgtgatatccactgtccatcccaaat 22330623 Query: 621 tcaccaaaaaagtttgaagactttgggggcgcaacatgcccaa 663 || ||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 22330624 tcgccaaagaagtttgaagattttgggggcgcaacatgtccaa 22330666 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 353 gttgatcaaatccgaagcactcagatcggcattagaattgttcgcttgttggccaaacag 412 |||||||||||| |||||||||||||| | || ||| | || | | | || ||||| || Sbjct: 22329310 gttgatcaaatctgaagcactcagatccacgttggaactattggttggatgaccaaatag 22329369 Query: 413 atcagcacttgaaatggcagaggatcc 439 ||||||||||||||||||||| ||||| Sbjct: 22329370 atcagcacttgaaatggcagaagatcc 22329396 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 atttgaccctccttttctaaa 479 ||||||||||||||||||||| Sbjct: 18670377 atttgaccctccttttctaaa 18670357
>emb|Z93062.1|SLZ93062 S.latifolia mRNA, clone CCLS 30.1-21 Length = 552 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 486 tgatcaccgaaaaactgagaagatgaaatagactttgcatttgagaacttctgtcttgct 545 ||||||||||| ||||||||||||||||| || ||||||||||||||||| | ||| || Sbjct: 246 tgatcaccgaagaactgagaagatgaaatggattttgcatttgagaacttttttctcgcc 305 Query: 546 tcactactttcctcaacctg 565 ||| | ||||||||||||| Sbjct: 306 tcatcagtttcctcaacctg 325 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 603 ccactgtccatcccgtattcaccaaaaaagtttgaagactttgggggcgcaacatg 658 ||||||||||| || | ||| |||| ||| |||| |||||||| ||||||||||| Sbjct: 363 ccactgtccataccaaagtcagcaaagaagcttgatgactttggtggcgcaacatg 418
>emb|Z93060.1|SLZ93060 S.latifolia mRNA, clone CCLS 29 Length = 1348 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 486 tgatcaccgaaaaactgagaagatgaaatagactttgcatttgagaactt 535 ||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 245 tgatcaccgaagaactgagaagatgaaatggattttgcatttgagaactt 294
>ref|XM_470448.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1678 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 403 ggccaaacagatcagcacttgaaatgg 429 ||||||| ||||||||||||||||||| Sbjct: 1173 ggccaaaaagatcagcacttgaaatgg 1147 Score = 44.1 bits (22), Expect = 0.58 Identities = 88/110 (80%) Strand = Plus / Minus Query: 264 ttggatgccatagatgtcagcttcttcccggtctgcccagccatgctcttgagagaggtc 323 ||||| || ||||||||||||||||| || || | |||||||| ||||||| || | | Sbjct: 1315 ttggaggctatagatgtcagcttctttccagtttctccagccatattcttgagggaagac 1256 Query: 324 aagtcctgagtggcctggaaggagattctgttgatcaaatccgaagcact 373 | || |||| |||||||| || ||||||||||| | ||||| |||||| Sbjct: 1255 agatcttgagatgcctggaatgatattctgttgatgagatccgcagcact 1206 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 495 aaaaactgagaagatgaaatagactttgcatttgagaa 532 ||||||||||| |||||||| | ||||||||| ||||| Sbjct: 1081 aaaaactgagatgatgaaattgcctttgcattagagaa 1044
>ref|NM_138717.1| Homo sapiens palmitoyl-protein thioesterase 2 (PPT2), transcript variant 2, mRNA Length = 1772 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1430 gtcctgagtggcctggaaggaga 1408
>ref|NM_005155.5| Homo sapiens palmitoyl-protein thioesterase 2 (PPT2), transcript variant 1, mRNA Length = 2202 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1877 gtcctgagtggcctggaaggaga 1855
>gb|BT019189.1| Zea mays clone Contig860.F mRNA sequence Length = 941 Score = 46.1 bits (23), Expect = 0.15 Identities = 77/95 (81%) Strand = Plus / Minus Query: 264 ttggatgccatagatgtcagcttcttcccggtctgcccagccatgctcttgagagaggtc 323 ||||| |||| ||||||||||||||| || |||| |||||| ||| |||||| || | | Sbjct: 613 ttggaggccagagatgtcagcttctttccagtctccccagctatgtccttgagcgaagac 554 Query: 324 aagtcctgagtggcctggaaggagattctgttgat 358 | ||||| | |||||||| || ||||||||||| Sbjct: 553 agatcctgtgaagcctggaaagatattctgttgat 519
>gb|U89336.1|HSMHC3W5A Homo sapiens HLA class III region containing NOTCH4 gene, partial sequence, homeobox PBX2 (HPBX) gene, receptor for advanced glycosylation end products (RAGE) gene, complete cds, and 6 unidentified cds, complete sequence Length = 62944 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 39891 gtcctgagtggcctggaaggaga 39913
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 403 ggccaaacagatcagcacttgaaatgg 429 ||||||| ||||||||||||||||||| Sbjct: 70005 ggccaaaaagatcagcacttgaaatgg 70031 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 495 aaaaactgagaagatgaaatagactttgcatttgagaa 532 ||||||||||| |||||||| | ||||||||| ||||| Sbjct: 70303 aaaaactgagatgatgaaattgcctttgcattagagaa 70340
>gb|BC001355.2| Homo sapiens palmitoyl-protein thioesterase 2, mRNA (cDNA clone IMAGE:3050231), partial cds Length = 1879 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1537 gtcctgagtggcctggaaggaga 1515
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 403 ggccaaacagatcagcacttgaaatgg 429 ||||||| ||||||||||||||||||| Sbjct: 35672227 ggccaaaaagatcagcacttgaaatgg 35672253 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 495 aaaaactgagaagatgaaatagactttgcatttgagaa 532 ||||||||||| |||||||| | ||||||||| ||||| Sbjct: 35672525 aaaaactgagatgatgaaattgcctttgcattagagaa 35672562 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 agatttgaccctccttttct 476 |||||||||||||||||||| Sbjct: 4379935 agatttgaccctccttttct 4379954
>emb|BX284686.9| Human DNA sequence from clone DASS-39F23 on chromosome 6, complete sequence Length = 80063 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 32867 gtcctgagtggcctggaaggaga 32845
>emb|AL845464.5| Human DNA sequence from clone DAQB-143M3 on chromosome 6 Contains the C6orf31 gene for chromosome 6 open reading frame 31, the PPT2 gene for palmitoyl-protein thioesterase 2, the EGFL8 gene for EGF-like-domain, multiple 8, the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha), the RNF5 gene for ring finger protein 5, the AGER gene for advanced glycosylation end product-specific receptor, the PBX2 gene for pre-B-cell leukemia transcription factor 2, the GPSM3 gene (previously C6orf9) for G-protein signalling modulator 3 (AGS3-like, C. elegans), the 3' end of the Notch4 gene for the Notch homolog 4 (Drosophila) and five CpG islands, complete sequence Length = 56747 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 23108 gtcctgagtggcctggaaggaga 23086
>emb|AL662884.11| Human DNA sequence from clone XXbac-300A18 on chromosome 6 contains the 5' end of the TNXB gene for tenascin XB (TNXB, XB, TNX, XBS, HXBL, TENX, TNXB1, TNXB2, TNXBS), the CREBL1 gene for cAMP responsive element binding protein-like 1 (CREBL1, G13, CREB-RP), the FKBPL gene for FK506 binding protein like (FKBPL, NG7, DIR1), the gene for chromosome 6 open reading frame 31 (C6orf31, NG5), a putative novel transcript, the PPT2 gene for palmitoyl-protein thioesterase 2 (PPT2, G14), the gene for chromosome 6 open reading frame 8 (C6orf8, NG3), the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) (AGPAT1,G15, LPAATA, MGC5423, LPAAT-alpha), the RNF5 gene for ring finger protein 5 (RNF5, G16, NG2, RING5), the AGER gene for advanced glycosylation end product-specific receptor (AGER, RAGE), the PBX2 gene for pre-B-cell leukemia transcription factor 2 (PBX2, G17, HOX12, PBX2MHC), the C6orf9 gene for chromosome 6 open reading frame 9 (C6orf9, G18, NG1), the NOTCH4 gene for Notch homolog 4 (Drosophila) (NOTCH4, INT3, NOTCH3) and seven CpG islands, complete sequence Length = 137935 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 76177 gtcctgagtggcctggaaggaga 76155
>emb|AL662828.5| Human DNA sequence from clone XXbac-105D18 on chromosome 6 contains the 3' end of the CYP21A2 gene for cytochrome P450, subfamily XXIA (steroid 21-hydroxylase, congenital adrenal hyperplasia), polypeptide 2, the TNXB gene for tenascin XB, the CREBL1 gene for cAMP responsive element binding protein-like 1, the FKBPL gene for FK506 binding protein like, the gene for chromosome 6 open reading frame 31, a putative novel transcript, the PPT2 gene for palmitoyl-protein thioesterase 2, the gene for chromosome 6 open reading frame 8, the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) and six CpG islands, complete sequence Length = 138992 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 123983 gtcctgagtggcctggaaggaga 123961
>emb|AL110128.1|HSM800771 Homo sapiens mRNA; cDNA DKFZp564P1516 (from clone DKFZp564P1516) Length = 1772 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1430 gtcctgagtggcctggaaggaga 1408
>emb|CR933878.7| Human DNA sequence from clone DAMC-108L3 on chromosome 6, complete sequence Length = 102907 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 33251 gtcctgagtggcctggaaggaga 33229
>emb|AL773562.15| Pig DNA sequence from clone XX-649D6, complete sequence Length = 127265 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 99888 gtcctgagtggcctggaaggaga 99910
>emb|CR812478.6| Human DNA sequence from clone DAAP-218M18 on chromosome 6, complete sequence Length = 75620 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 30421 gtcctgagtggcctggaaggaga 30399
>emb|CR625307.1| full-length cDNA clone CS0DD002YF02 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1753 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1547 gtcctgagtggcctggaaggaga 1525
>emb|CR621029.1| full-length cDNA clone CS0DI027YL22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1841 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1545 gtcctgagtggcctggaaggaga 1523
>emb|CR618793.1| full-length cDNA clone CS0DD006YD08 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1624 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1317 gtcctgagtggcctggaaggaga 1295
>emb|CR618419.1| full-length cDNA clone CS0DB009YN11 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 550 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 219 gtcctgagtggcctggaaggaga 197
>emb|CR608038.1| full-length cDNA clone CS0DD006YG16 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1806 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1497 gtcctgagtggcctggaaggaga 1475
>emb|CR600788.1| full-length cDNA clone CS0DM013YB13 of Fetal liver of Homo sapiens (human) Length = 1604 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1308 gtcctgagtggcctggaaggaga 1286
>emb|CR593559.1| full-length cDNA clone CS0DC029YA19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1840 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1544 gtcctgagtggcctggaaggaga 1522
>emb|CR591137.1| full-length cDNA clone CS0DI026YL20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1721 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1426 gtcctgagtggcctggaaggaga 1404
>emb|BX927239.5| Human DNA sequence from clone DAMA-358M23 on chromosome 6, complete sequence Length = 102588 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 23087 gtcctgagtggcctggaaggaga 23065
>gb|AC148664.1| Macaca mulatta Major Histocompatibility Complex BAC MMU021E24, complete sequence Length = 189424 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 168842 gtcctgagtggcctggaaggaga 168820
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 403 ggccaaacagatcagcacttgaaatgg 429 ||||||| ||||||||||||||||||| Sbjct: 35762300 ggccaaaaagatcagcacttgaaatgg 35762326 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 495 aaaaactgagaagatgaaatagactttgcatttgagaa 532 ||||||||||| |||||||| | ||||||||| ||||| Sbjct: 35762598 aaaaactgagatgatgaaattgcctttgcattagagaa 35762635 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 agatttgaccctccttttct 476 |||||||||||||||||||| Sbjct: 4380050 agatttgaccctccttttct 4380069
>gb|AF020543.1|AF020543 Homo sapiens palmitoyl-protein thioesterase-2 (PPT2) mRNA, complete cds Length = 1993 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1669 gtcctgagtggcctggaaggaga 1647
>dbj|AK104897.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-B12, full insert sequence Length = 592 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 403 ggccaaacagatcagcacttgaaatgg 429 ||||||| ||||||||||||||||||| Sbjct: 190 ggccaaaaagatcagcacttgaaatgg 164 Score = 44.1 bits (22), Expect = 0.58 Identities = 88/110 (80%) Strand = Plus / Minus Query: 264 ttggatgccatagatgtcagcttcttcccggtctgcccagccatgctcttgagagaggtc 323 ||||| || ||||||||||||||||| || || | |||||||| ||||||| || | | Sbjct: 332 ttggaggctatagatgtcagcttctttccagtttctccagccatattcttgagggaagac 273 Query: 324 aagtcctgagtggcctggaaggagattctgttgatcaaatccgaagcact 373 | || |||| |||||||| || ||||||||||| | ||||| |||||| Sbjct: 272 agatcttgagatgcctggaatgatattctgttgatgagatccgcagcact 223 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 495 aaaaactgagaagatgaaatagactttgcatttgagaa 532 ||||||||||| |||||||| | ||||||||| ||||| Sbjct: 98 aaaaactgagatgatgaaattgcctttgcattagagaa 61
>emb|Y17958.1|HSA17958 Homo sapiens mRNA for palmitoyl protein thioesterase 2 Length = 1963 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1617 gtcctgagtggcctggaaggaga 1595
>dbj|AK067615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107N20, full insert sequence Length = 1721 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 403 ggccaaacagatcagcacttgaaatgg 429 ||||||| ||||||||||||||||||| Sbjct: 1250 ggccaaaaagatcagcacttgaaatgg 1224 Score = 44.1 bits (22), Expect = 0.58 Identities = 88/110 (80%) Strand = Plus / Minus Query: 264 ttggatgccatagatgtcagcttcttcccggtctgcccagccatgctcttgagagaggtc 323 ||||| || ||||||||||||||||| || || | |||||||| ||||||| || | | Sbjct: 1392 ttggaggctatagatgtcagcttctttccagtttctccagccatattcttgagggaagac 1333 Query: 324 aagtcctgagtggcctggaaggagattctgttgatcaaatccgaagcact 373 | || |||| |||||||| || ||||||||||| | ||||| |||||| Sbjct: 1332 agatcttgagatgcctggaatgatattctgttgatgagatccgcagcact 1283 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 495 aaaaactgagaagatgaaatagactttgcatttgagaa 532 ||||||||||| |||||||| | ||||||||| ||||| Sbjct: 1158 aaaaactgagatgatgaaattgcctttgcattagagaa 1121
>gb|BC000955.1| Homo sapiens cDNA clone IMAGE:3450442, containing frame-shift errors Length = 1764 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gtcctgagtggcctggaaggaga 348 ||||||||||||||||||||||| Sbjct: 1425 gtcctgagtggcctggaaggaga 1403
>gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, complete sequence Length = 171061 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 catagatgtcagcttcttccc 292 ||||||||||||||||||||| Sbjct: 100426 catagatgtcagcttcttccc 100446
>emb|AL035089.21|HS1030M6 Human DNA sequence from clone RP5-1030M6 on chromosome 20q12-13.2 Contains the 5' end of the C20orf100 gene for a novel HMG (high mobility group) box protein similar to KIAA0808, two novel genes and two CpG islands, complete sequence Length = 173804 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 495 aaaaactgagaagatgaaata 515 ||||||||||||||||||||| Sbjct: 128350 aaaaactgagaagatgaaata 128370
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 atttgaccctccttttctaaa 479 ||||||||||||||||||||| Sbjct: 20802 atttgaccctccttttctaaa 20782
>ref|XM_522500.1| PREDICTED: Pan troglodytes similar to ELK3 protein; ETS-domain protein; SRF accessory protein 2 (LOC467100), mRNA Length = 3249 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 tgaaatggcagaggatccag 441 |||||||||||||||||||| Sbjct: 2051 tgaaatggcagaggatccag 2070
>gb|AY775882.1| Bubalus bubalis clone BBMS053 microsatellite sequence Length = 1091 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 990 tcctctttctttccttccct 1009
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 agagaatttttggagcgaga 459 |||||||||||||||||||| Sbjct: 536798 agagaatttttggagcgaga 536779
>gb|AY018605.1| Oryza sativa microsatellite MRG0930 containing (AT)X18, closest to marker S13048, genomic sequence Length = 236 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 tttgaccctccttttctaaa 479 |||||||||||||||||||| Sbjct: 208 tttgaccctccttttctaaa 227
>gb|AY018156.1| Oryza sativa microsatellite MRG0481 containing (AT)X12, closest to marker S13048, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tttgaccctccttttctaaa 479 |||||||||||||||||||| Sbjct: 29 tttgaccctccttttctaaa 10
>gb|AC102444.8| Mus musculus chromosome 1, clone RP24-196I15, complete sequence Length = 144463 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 140288 tcctctttctttccttccct 140307
>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence Length = 262048 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 atgccatagatgtcagcttc 287 |||||||||||||||||||| Sbjct: 214615 atgccatagatgtcagcttc 214596
>gb|AC006318.2| Homo sapiens PAC clone RP4-728I19 from 7, complete sequence Length = 149384 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 625 caaaaaagtttgaagacttt 644 |||||||||||||||||||| Sbjct: 39205 caaaaaagtttgaagacttt 39224
>gb|AC012645.7| Homo sapiens chromosome 16 clone RP11-455F5, complete sequence Length = 192943 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ataaaatcctctttctttcc 114 |||||||||||||||||||| Sbjct: 99430 ataaaatcctctttctttcc 99411
>gb|AC135638.5| Mus musculus BAC clone RP23-330K10 from chromosome 18, complete sequence Length = 184588 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctctttctttccttccctac 122 |||||||||||||||||||| Sbjct: 61211 ctctttctttccttccctac 61192
>emb|CR376787.10| Zebrafish DNA sequence from clone DKEY-33C9 in linkage group 7, complete sequence Length = 217684 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 attcgcaataaaatcctctt 107 |||||||||||||||||||| Sbjct: 772 attcgcaataaaatcctctt 753
>ref|XM_568660.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNN01850) partial mRNA Length = 987 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 agagaatttttggagcgaga 459 |||||||||||||||||||| Sbjct: 409 agagaatttttggagcgaga 428
>emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in linkage group 1, complete sequence Length = 208746 Score = 40.1 bits (20), Expect = 9.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 541 ttgcttcactactttcc-tcaacctgca 567 ||||||||||||||||| |||||||||| Sbjct: 145747 ttgcttcactactttccttcaacctgca 145774
>gb|AC146274.2| Pan troglodytes BAC clone RP43-29I24 from 7, complete sequence Length = 51473 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 20907 tcctctttctttccttccct 20926
>gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, complete sequence Length = 225739 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 ggtctgcccagccatgctcttgag 316 |||||| ||||||||||||||||| Sbjct: 195952 ggtctgaccagccatgctcttgag 195975
>gb|AC010099.10| Homo sapiens BAC clone RP11-420H19 from 7, complete sequence Length = 154836 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 agcattcgcaataaaatcct 104 |||||||||||||||||||| Sbjct: 125426 agcattcgcaataaaatcct 125445
>gb|AC004942.1| Homo sapiens PAC clone RP5-981B16 from 7, complete sequence Length = 76079 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 26204 tcctctttctttccttccct 26223
>gb|AC145816.1| Pan troglodytes BAC clone RP43-6A13 from 7, complete sequence Length = 200683 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 625 caaaaaagtttgaagacttt 644 |||||||||||||||||||| Sbjct: 81873 caaaaaagtttgaagacttt 81892
>emb|AL163284.2|HS21C084 Homo sapiens chromosome 21 segment HS21C084 Length = 340000 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agtaaattagttaagcattc 91 |||||||||||||||||||| Sbjct: 75021 agtaaattagttaagcattc 75002
>gb|AC163899.3| Mus musculus chromosome 1, clone RP24-383F13, complete sequence Length = 227890 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 34322 tcctctttctttccttccct 34341
>gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosome 17, complete sequence Length = 185609 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 ggtctgcccagccatgctcttgag 316 |||||| ||||||||||||||||| Sbjct: 53289 ggtctgaccagccatgctcttgag 53312
>emb|Z94161.5|HSN102C10 Human DNA sequence from clone LL22NC03-102C10 on chromosome 22q13 Contains the first exon of the PPARA gene for peroxisome proliferative activated receptor alpha, an EST, GSSs and a putative CpG island, complete sequence Length = 44134 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aataaaatcctctttctttc 113 |||||||||||||||||||| Sbjct: 17154 aataaaatcctctttctttc 17135
>gb|AC008149.14| Homo sapiens 12 BAC RP11-394J1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 96995 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 tgaaatggcagaggatccag 441 |||||||||||||||||||| Sbjct: 37465 tgaaatggcagaggatccag 37446
>emb|AL133284.13| Human DNA sequence from clone RP11-67K19 on chromosome 9q33.1-34.11 Contains part of the ASTN2 gene for astrotactin 2 (KIAA0634), the TRIM32 gene for tripartite motif-containing 32, and a novel gene, complete sequence Length = 155466 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 tggcctggaaggagattctg 353 |||||||||||||||||||| Sbjct: 37446 tggcctggaaggagattctg 37465
>gb|AC157909.5| Mus musculus chromosome 18, clone RP24-362I13, complete sequence Length = 140042 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 98740 tcctctttctttccttccct 98721
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 tggcctggaaggagattctg 353 |||||||||||||||||||| Sbjct: 1847746 tggcctggaaggagattctg 1847727
>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47 Length = 198067 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 525 tttgagaacttctgtcttgcttca 548 ||||||||||||| |||||||||| Sbjct: 111395 tttgagaacttctttcttgcttca 111372
>emb|AL021889.2|ATT6K21 Arabidopsis thaliana DNA chromosome 4, BAC clone T6K21 (ESSA project) Length = 99643 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 525 tttgagaacttctgtcttgcttca 548 ||||||||||||| |||||||||| Sbjct: 35014 tttgagaacttctttcttgcttca 34991
>emb|CR384099.6| Zebrafish DNA sequence from clone DKEY-266I18 in linkage group 24, complete sequence Length = 121857 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 515 agactttgcatttgagaacttctg 538 |||||| ||||||||||||||||| Sbjct: 39133 agacttagcatttgagaacttctg 39110
>emb|AL954237.1| Pan troglodytes chromosome 22 clone PTB-219D01 map 22q22.2-q22.3, complete sequence Length = 82980 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agtaaattagttaagcattc 91 |||||||||||||||||||| Sbjct: 61498 agtaaattagttaagcattc 61479
>gb|AC018898.17| Homo sapiens 3 BAC RP11-178K17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170606 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ctggaaggagattctgttga 357 |||||||||||||||||||| Sbjct: 118723 ctggaaggagattctgttga 118742
>emb|BX470266.10| Zebrafish DNA sequence from clone DKEYP-9D4 in linkage group 1, complete sequence Length = 194021 Score = 40.1 bits (20), Expect = 9.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 541 ttgcttcactactttcc-tcaacctgca 567 ||||||||||||||||| |||||||||| Sbjct: 70794 ttgcttcactactttccttcaacctgca 70821
>emb|BX957344.6| Zebrafish DNA sequence from clone CH211-129N15 in linkage group 19, complete sequence Length = 168128 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 509 tgaaatagactttgcatttgagaa 532 ||||||| |||||||||||||||| Sbjct: 141145 tgaaataaactttgcatttgagaa 141122
>gb|AC102131.20| Mus musculus chromosome 18, clone RP23-223O13, complete sequence Length = 200227 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 199429 tcctctttctttccttccct 199410
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 agatttgaccctccttttct 476 |||||||||||||||||||| Sbjct: 46562 agatttgaccctccttttct 46543
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 atttgaccctccttttctaaattg 482 ||||||||||||||||| |||||| Sbjct: 3182623 atttgaccctccttttcaaaattg 3182600
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 tttgaccctccttttctaaa 479 |||||||||||||||||||| Sbjct: 1663388 tttgaccctccttttctaaa 1663407
>gb|AC138466.12| Homo sapiens 12 BAC RP13-977J11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129492 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 284 cttcttcccggtctgcccagccatgctc 311 ||||||||| |||||||||||| ||||| Sbjct: 60107 cttcttcccagtctgcccagccctgctc 60134
>gb|BC089212.1| Rattus norvegicus similar to cDNA sequence BC005537, mRNA (cDNA clone MGC:105535 IMAGE:7302835), complete cds Length = 2165 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 24 tcctctttctttccttccct 43
>gb|BC085940.1| Rattus norvegicus similar to cDNA sequence BC005537, mRNA (cDNA clone MGC:95046 IMAGE:7123624), complete cds Length = 2214 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 226 tcctctttctttccttccct 245
>ref|NM_001017510.1| Rattus norvegicus similar to cDNA sequence BC005537 (LOC498750), mRNA Length = 2214 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 226 tcctctttctttccttccct 245
>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete sequence Length = 219580 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 agcattcgcaataaaatcct 104 |||||||||||||||||||| Sbjct: 105972 agcattcgcaataaaatcct 105991
>gb|AC017053.8| Homo sapiens BAC clone RP11-339D8 from 2, complete sequence Length = 181952 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 11739 tcctctttctttccttccct 11720
>gb|AY206718.1| Homo sapiens peroxisome proliferative activated receptor, alpha (PPARA) gene, complete cds Length = 86215 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aataaaatcctctttctttc 113 |||||||||||||||||||| Sbjct: 6752 aataaaatcctctttctttc 6771
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 tttgaccctccttttctaaa 479 |||||||||||||||||||| Sbjct: 5731 tttgaccctccttttctaaa 5750
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 atttgaccctccttttctaaattg 482 ||||||||||||||||| |||||| Sbjct: 136808 atttgaccctccttttcaaaattg 136785
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 tttgaccctccttttctaaa 479 |||||||||||||||||||| Sbjct: 100619 tttgaccctccttttctaaa 100638
>dbj|BS000158.1| Pan troglodytes chromosome 22 clone:PTB-042G18, map 22, complete sequences Length = 190319 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 626 aaaaaagtttgaagactttg 645 |||||||||||||||||||| Sbjct: 21146 aaaaaagtttgaagactttg 21127
>gb|AC157575.1| Mus musculus BAC clone RP23-16D16 from 9, complete sequence Length = 196682 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 atgccatagatgtcagcttc 287 |||||||||||||||||||| Sbjct: 191656 atgccatagatgtcagcttc 191675
>emb|CR751235.5| Zebrafish DNA sequence from clone CH211-240J22 in linkage group 4, complete sequence Length = 104632 Score = 40.1 bits (20), Expect = 9.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 541 ttgcttcactactttcc-tcaacctgca 567 ||||||||||||||||| |||||||||| Sbjct: 24930 ttgcttcactactttccttcaacctgca 24903
>emb|AL954234.1|PTB080A15 Pan troglodytes chromosome 22 BAC PTB-080A15, complete sequence Length = 175584 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 626 aaaaaagtttgaagactttg 645 |||||||||||||||||||| Sbjct: 10534 aaaaaagtttgaagactttg 10515
>emb|AL954233.1|RP43116M22 Pan troglodytes chromosome 22 BAC RP43-116M22, complete sequence Length = 163163 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 626 aaaaaagtttgaagactttg 645 |||||||||||||||||||| Sbjct: 149665 aaaaaagtttgaagactttg 149646
>dbj|AK114358.1| Ciona intestinalis cDNA, clone:cicl058h19, full insert sequence Length = 1401 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ttctttggtagcacagcacc 27 |||||||||||||||||||| Sbjct: 971 ttctttggtagcacagcacc 990
>emb|AL824710.10| Mouse DNA sequence from clone RP23-35E16 on chromosome 2, complete sequence Length = 83371 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 tgagaacttctgtcttgctt 546 |||||||||||||||||||| Sbjct: 82617 tgagaacttctgtcttgctt 82598
>emb|AL773569.1|HS247E2 Homo sapiens chromosome 21 from PAC RP1-247E2 map 21q22.2,D21S349-MX1, complete sequence Length = 153402 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agtaaattagttaagcattc 91 |||||||||||||||||||| Sbjct: 46656 agtaaattagttaagcattc 46637
>emb|AL929100.11| Mouse DNA sequence from clone RP23-436G18 on chromosome 2, complete sequence Length = 196372 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tcctctttctttccttccct 120 |||||||||||||||||||| Sbjct: 187419 tcctctttctttccttccct 187400
>emb|AL808123.9| Mouse DNA sequence from clone RP23-73K21 on chromosome 2, complete sequence Length = 158637 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 tgagaacttctgtcttgctt 546 |||||||||||||||||||| Sbjct: 1246 tgagaacttctgtcttgctt 1227 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,707,537 Number of Sequences: 3902068 Number of extensions: 6707537 Number of successful extensions: 146563 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 146087 Number of HSP's gapped (non-prelim): 475 length of query: 664 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 641 effective length of database: 17,143,297,704 effective search space: 10988853828264 effective search space used: 10988853828264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)