ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal6a20 |
|---|---|
| Clone Library Name | barley_pub |
>UBL5_ARATH (Q9FGZ9) Ubiquitin-like protein 5| Length = 73 Score = 146 bits (369), Expect = 3e-35 Identities = 70/73 (95%), Positives = 71/73 (97%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWY IYKDHITL DY Sbjct: 1 MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60 Query: 277 EIHDGMGLELYYN 239 EIHDGMGLELYYN Sbjct: 61 EIHDGMGLELYYN 73
>UBL5_PSAOB (Q791B0) Ubiquitin-like protein 5 (Beacon protein)| Length = 73 Score = 130 bits (326), Expect = 3e-30 Identities = 60/72 (83%), Positives = 66/72 (91%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR KI ++KWYTI+KDH++LGDY Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60 Query: 277 EIHDGMGLELYY 242 EIHDGM LELYY Sbjct: 61 EIHDGMNLELYY 72
>UBL5_MOUSE (Q9EPV8) Ubiquitin-like protein 5| Length = 73 Score = 130 bits (326), Expect = 3e-30 Identities = 60/72 (83%), Positives = 66/72 (91%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR KI ++KWYTI+KDH++LGDY Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60 Query: 277 EIHDGMGLELYY 242 EIHDGM LELYY Sbjct: 61 EIHDGMNLELYY 72
>UBL5_MESAU (Q6EGX7) Ubiquitin-like protein 5 (Beacon protein)| Length = 73 Score = 130 bits (326), Expect = 3e-30 Identities = 60/72 (83%), Positives = 66/72 (91%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR KI ++KWYTI+KDH++LGDY Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60 Query: 277 EIHDGMGLELYY 242 EIHDGM LELYY Sbjct: 61 EIHDGMNLELYY 72
>UBL5_HUMAN (Q9BZL1) Ubiquitin-like protein 5| Length = 73 Score = 130 bits (326), Expect = 3e-30 Identities = 60/72 (83%), Positives = 66/72 (91%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR KI ++KWYTI+KDH++LGDY Sbjct: 1 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60 Query: 277 EIHDGMGLELYY 242 EIHDGM LELYY Sbjct: 61 EIHDGMNLELYY 72
>UBL5_BRARE (Q7SXF2) Ubiquitin-like protein 5| Length = 73 Score = 129 bits (325), Expect = 4e-30 Identities = 59/72 (81%), Positives = 68/72 (94%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEVV NDRLGKKVRVKCN++DTIGDLKKL+AAQTGTR EKI ++KWYTI+K+H++LGDY Sbjct: 1 MIEVVCNDRLGKKVRVKCNQEDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKNHVSLGDY 60 Query: 277 EIHDGMGLELYY 242 EIHDGM LELYY Sbjct: 61 EIHDGMNLELYY 72
>UBL5_CAEEL (P91302) Ubiquitin-like protein 5| Length = 73 Score = 123 bits (308), Expect = 4e-28 Identities = 56/72 (77%), Positives = 63/72 (87%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIE+ +NDRLGKKVR+KCN DTIGDLKKL+AAQTGTR EKI ++KWYTIYKDHITL DY Sbjct: 1 MIEITVNDRLGKKVRIKCNPSDTIGDLKKLIAAQTGTRWEKIVLKKWYTIYKDHITLMDY 60 Query: 277 EIHDGMGLELYY 242 EIH+G ELYY Sbjct: 61 EIHEGFNFELYY 72
>UBL5_DROME (Q9V998) Ubiquitin-like protein 5| Length = 73 Score = 122 bits (307), Expect = 5e-28 Identities = 57/72 (79%), Positives = 63/72 (87%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIE+ NDRLGKKVRVKCN DDTIGDLKKL+AAQTGT+ EKI ++KWYTI+KD I L DY Sbjct: 1 MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTKHEKIVLKKWYTIFKDPIRLSDY 60 Query: 277 EIHDGMGLELYY 242 EIHDGM LELYY Sbjct: 61 EIHDGMNLELYY 72
>HUB1_SCHPO (O94650) Ubiquitin-like modifier hub1| Length = 73 Score = 114 bits (284), Expect = 2e-25 Identities = 51/73 (69%), Positives = 63/73 (86%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEV+ NDRLGKKVRVKC DDT+GD KKLVAAQTGT +I ++KW++++KD+ITL DY Sbjct: 1 MIEVLCNDRLGKKVRVKCMPDDTVGDFKKLVAAQTGTDPRRIVLKKWHSVFKDNITLADY 60 Query: 277 EIHDGMGLELYYN 239 EIHDGM LE+YY+ Sbjct: 61 EIHDGMSLEMYYS 73
>HUB1_DEBHA (Q6BUP7) Ubiquitin-like modifier HUB1| Length = 73 Score = 103 bits (256), Expect = 4e-22 Identities = 46/73 (63%), Positives = 58/73 (79%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEV+ NDRLGKK++VKC DTIGDLKK+++ Q GT EKI ++K Y +YKDHITL DY Sbjct: 1 MIEVLANDRLGKKIKVKCMPTDTIGDLKKIISLQIGTSYEKIVLKKGYQVYKDHITLDDY 60 Query: 277 EIHDGMGLELYYN 239 E+H+G ELYY+ Sbjct: 61 EVHNGFNFELYYS 73
>HUB1_CANGA (Q6FIX7) Ubiquitin-like modifier HUB1| Length = 73 Score = 99.4 bits (246), Expect = 5e-21 Identities = 45/73 (61%), Positives = 58/73 (79%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEV++NDRLGKK+RVKC EDDT+GD KK+++ Q G + KI +QK ++ KDHITL DY Sbjct: 1 MIEVLVNDRLGKKIRVKCLEDDTVGDFKKVLSVQLGMQPSKIVLQKGGSVLKDHITLYDY 60 Query: 277 EIHDGMGLELYYN 239 E+HD LELYY+ Sbjct: 61 EVHDNTNLELYYS 73
>HUB1_KLULA (Q6CU12) Ubiquitin-like modifier HUB1| Length = 74 Score = 95.5 bits (236), Expect = 8e-20 Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 1/73 (1%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGT-RAEKIRIQKWYTIYKDHITLGD 281 MIEV++NDRLGKKV VKC +DT+GD KK+++ Q GT A KI +QK ++ KDHITL D Sbjct: 1 MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLED 60 Query: 280 YEIHDGMGLELYY 242 YE+HDG LELYY Sbjct: 61 YEVHDGTNLELYY 73
>HUB1_YEAST (Q6Q546) Ubiquitin-like modifier HUB1| Length = 73 Score = 95.1 bits (235), Expect = 1e-19 Identities = 44/72 (61%), Positives = 57/72 (79%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEVV+NDRLGKKVRVKC +D++GD KK+++ Q GT+ KI +QK ++ KDHI+L DY Sbjct: 1 MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDY 60 Query: 277 EIHDGMGLELYY 242 E+HD LELYY Sbjct: 61 EVHDQTNLELYY 72
>HUB1_ASHGO (Q756X3) Ubiquitin-like modifier HUB1| Length = 73 Score = 92.0 bits (227), Expect = 9e-19 Identities = 43/72 (59%), Positives = 54/72 (75%) Frame = -1 Query: 457 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 278 MIEV++NDRLGKK+RVKC D++GDLKK++A Q GT K+ + K KDHI+L DY Sbjct: 1 MIEVIVNDRLGKKLRVKCLSTDSVGDLKKVLAVQLGTAHGKVALHKGGVNLKDHISLDDY 60 Query: 277 EIHDGMGLELYY 242 E+HDG LELYY Sbjct: 61 EVHDGTYLELYY 72
>GRIP1_RAT (P97879) Glutamate receptor-interacting protein 1 (GRIP1 protein)| (AMPA receptor-interacting protein GRIP1) Length = 1112 Score = 33.1 bits (74), Expect = 0.48 Identities = 20/44 (45%), Positives = 23/44 (52%) Frame = -3 Query: 314 HHLQGPHHPWRLRDPRWDGPRALLQLASSPPAMFSHLSLPSMIA 183 +H PHHP R P P+AL +SPPAM S S SM A Sbjct: 372 NHHHNPHHPDHCRVPALGFPKAL--TPNSPPAMVSSSSPTSMSA 413
>VGLL2_HUMAN (Q8N8G2) Transcription cofactor vestigial-like protein 2 (Vgl-2)| (VITO1 protein) Length = 317 Score = 33.1 bits (74), Expect = 0.48 Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Frame = -3 Query: 392 HHRRPQE--ARGGADRDQGREDPHPEVVHHLQGPHHPWRLRDPRWDGPRALLQLASSPPA 219 HH P A GGA Q P P VH + PH DPR+ GP L+ AS PA Sbjct: 200 HHAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHF-----DPRY-GP-LLMPAASGRPA 252 Query: 218 MFSHLSLPS 192 + P+ Sbjct: 253 RLATAPAPA 261
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 31.6 bits (70), Expect = 1.4 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +1 Query: 220 AGGDEASCSRARGPSHRGSRSRQG*CGPCRWC 315 +GG A R PSH G + R CG CR C Sbjct: 941 SGGTLAHTPRRSLPSHHGKKMRMARCGHCRGC 972
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 31.6 bits (70), Expect = 1.4 Identities = 12/34 (35%), Positives = 14/34 (41%) Frame = -3 Query: 392 HHRRPQEARGGADRDQGREDPHPEVVHHLQGPHH 291 HH P+E + PHP HH PHH Sbjct: 78 HHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHH 111
>CABP3_HUMAN (Q9NZU6) Calcium-binding protein 3 (CaBP3)| Length = 192 Score = 31.2 bits (69), Expect = 1.8 Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -3 Query: 263 DGPRALLQLASSPPAMFSH-LSLPSMIASVAFQSQCLQSLMCGM 135 DGP +LL + + PP + H + S ++ + +S+CL+++ G+ Sbjct: 50 DGPSSLLPVGAQPPYLLQHSFATSSCLSWLLLRSRCLRAVTAGL 93
>GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor| Length = 639 Score = 31.2 bits (69), Expect = 1.8 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Frame = -3 Query: 440 QRPPGEEGARQVQRGRHHRRPQE--ARGGADRDQGREDPHPEVVHHLQGPHHPWRLRDPR 267 ++P EE Q + HR+ ++ +G + RE P P H + H W+ + + Sbjct: 109 RQPHQEEEHEQKEEHEWHRKEEKHGGKGSEEEQDEREHPRPHQPHQKEEEKHEWQHKQEK 168 Query: 266 WDG 258 G Sbjct: 169 HQG 171
>ATC3_YEAST (P39524) Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)| Length = 1355 Score = 30.4 bits (67), Expect = 3.1 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +1 Query: 70 FRLSIIIMGTIMHYLYSSSLEFIPHIKL*RHWDWNAT 180 F +I+ +GTI+ Y Y +L H +L HW W T Sbjct: 1103 FHSAIVFIGTILIYRYGFALNM--HGELADHWSWGVT 1137
>NPAS1_HUMAN (Q99742) Neuronal PAS domain protein 1 (Neuronal PAS1) (Member of| PAS protein 5) (MOP5) Length = 590 Score = 30.0 bits (66), Expect = 4.1 Identities = 27/88 (30%), Positives = 29/88 (32%), Gaps = 13/88 (14%) Frame = -3 Query: 440 QRPPGEEGARQVQRGRHHRRPQEARGGADRDQGRED-------PHPEVVHHL------QG 300 Q P E A Q Q R P D G ED P PE + Q Sbjct: 447 QAAPAENEAPQTQGKRIKVEPGPRETKGSEDSGDEDPSSHPATPRPEFTSVIRAGVLKQD 506 Query: 299 PHHPWRLRDPRWDGPRALLQLASSPPAM 216 P PW L P D P LL PP + Sbjct: 507 PVRPWGLAPP-GDPPPTLLHAGFLPPVV 533
>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)| Length = 427 Score = 29.6 bits (65), Expect = 5.3 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -3 Query: 338 EDPHPEVVHHLQGPHHPWRLRDP 270 + P P VHH PHHP+ + P Sbjct: 399 KSPPPPPVHHYSPPHHPYLYKSP 421
>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1287 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 5/48 (10%) Frame = -3 Query: 347 QGREDPHPEVVHHLQGPHHPWRLRDPR-----WDGPRALLQLASSPPA 219 + R DP P V Q PW R P W P LL ++PPA Sbjct: 1194 RSRSDPGPPVPRLPQKQRAPWGPRTPHRVPGPWGPPEPLLLYRAAPPA 1241
>ENO_MYCH2 (Q601S2) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 452 Score = 29.3 bits (64), Expect = 7.0 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = -1 Query: 403 NEDDTIGDLKKLVAA---QTGTRAEKIRIQKWYTIYKDHITLGDYEIHDGMGLELYYN 239 +ED TI DL V++ +TG+ + RI K+ + L Y D +G E++YN Sbjct: 392 SEDTTIADLAVAVSSGQIKTGSLSRTDRIAKYNRLLVIEEYLNSYAKADYIGREVFYN 449
>DNB2_ADE04 (P06500) Early E2A DNA-binding protein| Length = 512 Score = 29.3 bits (64), Expect = 7.0 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 419 GARQVQRGRHHRRPQEARGGADRDQGREDPHP 324 G Q++R R R P RG A GRE P P Sbjct: 5 GGSQLER-RRERTPDRGRGSASHPPGRESPSP 35
>T2_MOUSE (Q06666) Octapeptide-repeat protein T2| Length = 185 Score = 29.3 bits (64), Expect = 7.0 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = -3 Query: 443 AQRPPGEEGARQVQRGRHHRRPQEARGG---ADRDQGRE 336 A+R G E R+V+R R R + RG A+R +GRE Sbjct: 68 AERQRGRERGREVERHRRGREAERQRGREREAERQRGRE 106
>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2505 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = -3 Query: 443 AQRPPGEEGA--RQVQRGRHHRRPQEARGGADRDQG 342 A R PGEEG + +R RH + ARGG +G Sbjct: 961 AHRRPGEEGPEDKAERRARHREGSRPARGGEGEGEG 996
>TNR21_HUMAN (O75509) Tumor necrosis factor receptor superfamily member 21| precursor (TNFR-related death receptor 6) (Death receptor 6) Length = 655 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -3 Query: 407 VQRGRHHRRPQEARGGADRDQGREDPHPEVVHHLQGPHH 291 +Q G ARG D + P+ +VV+H QGPHH Sbjct: 270 IQEGTVPDNTSSARG--KEDVNKTLPNLQVVNHQQGPHH 306
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 28.9 bits (63), Expect = 9.1 Identities = 21/60 (35%), Positives = 22/60 (36%) Frame = -3 Query: 434 PPGEEGARQVQRGRHHRRPQEARGGADRDQGREDPHPEVVHHLQGPHHPWRLRDPRWDGP 255 PPG G +G H P G P V L GP P R DP WDGP Sbjct: 630 PPGGPGG---PKGMQHFPPGPGGPMPGPHGGPGGPGGPVGPRLLGPPPPPRGGDPFWDGP 686
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 28.9 bits (63), Expect = 9.1 Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Frame = -3 Query: 440 QRPPGEEGARQVQRGRHHRRPQEARGGADRDQGREDPHPEVVHHLQGPHHPWRLRDPRWD 261 Q P G +G Q HH+ P HH Q PHHP P+ Sbjct: 78 QEPLGSDGPMPAQPPHHHQHP---------------------HHHQLPHHPHHQHHPQQQ 116 Query: 260 -GPRALLQLASSPPAMFS 210 P+ +SPPA S Sbjct: 117 PSPQ------TSPPASIS 128
>ENK8_HUMAN (Q9HDB8) HERV-K_3q12.3 provirus ancestral Env polyprotein (Envelope| polyprotein) (HERV-K(II) envelope protein) [Includes: Truncated surface protein (SU)] Length = 245 Score = 28.9 bits (63), Expect = 9.1 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = -3 Query: 350 DQGREDPHPEVVHHLQGPHHP--WRL 279 ++G P PE++ + GP HP WRL Sbjct: 206 EKGISTPRPEIISPVSGPEHPELWRL 231 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,801,173 Number of Sequences: 219361 Number of extensions: 1319543 Number of successful extensions: 4510 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4500 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
