ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6a17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1S61A2_MOUSE (Q9JLR1) Protein transport protein Sec61 alpha subun... 82 4e-16
2S61A2_HUMAN (Q9H9S3) Protein transport protein Sec61 alpha subun... 82 4e-16
3SC61A_HALRO (Q25147) Protein transport protein Sec61 alpha subunit 82 6e-16
4S61A1_RAT (P61621) Protein transport protein Sec61 alpha subunit... 82 7e-16
5S61A1_PONPY (Q5R5L5) Protein transport protein Sec61 alpha subun... 82 7e-16
6S61A1_MOUSE (P61620) Protein transport protein Sec61 alpha subun... 82 7e-16
7S61A1_HUMAN (P61619) Protein transport protein Sec61 alpha subun... 82 7e-16
8S61A1_CANFA (P38377) Protein transport protein Sec61 alpha subun... 82 7e-16
9SC61A_PAGBO (Q8AY36) Protein transport protein Sec61 alpha subunit 80 3e-15
10SC61A_NOTAN (Q8AY35) Protein transport protein Sec61 alpha subunit 80 3e-15
11SC61A_HARAN (Q7T278) Protein transport protein Sec61 alpha subunit 80 3e-15
12SC61A_GADOC (Q8AY32) Protein transport protein Sec61 alpha subunit 80 3e-15
13SC61A_DISMA (Q7T277) Protein transport protein Sec61 alpha subunit 80 3e-15
14SC61A_BORSA (Q8AY33) Protein transport protein Sec61 alpha subunit 80 3e-15
15S61A2_ONCMY (Q98SN8) Protein transport protein Sec61 alpha subun... 80 3e-15
16S61A1_ONCMY (Q98SN9) Protein transport protein Sec61 alpha subun... 80 3e-15
17SC61A_HEMAM (Q8AY34) Protein transport protein Sec61 alpha subunit 79 4e-15
18SC61A_BOVVA (Q8AY31) Protein transport protein Sec61 alpha subunit 79 4e-15
19S61A1_BRARE (Q90ZM2) Protein transport protein Sec61 alpha subun... 79 4e-15
20S61A2_BRARE (Q90YL4) Protein transport protein Sec61 alpha subun... 79 5e-15
21SC61A_PYRSA (P38379) Protein transport protein Sec61 alpha subunit 69 6e-12
22SC61A_NEUCR (Q870W0) Protein transport protein SEC61 alpha subunit 67 2e-11
23SC61A_CANAL (Q9P8E3) Protein transport protein SEC61 alpha subunit 58 1e-08
24SC61A_YARLI (P78979) Protein transport protein SEC61 alpha subunit 57 1e-08
25SC61A_HANAN (Q96TW8) Protein transport protein SEC61 alpha subunit 57 2e-08
26SC61A_DEBHA (Q6BN08) Protein transport protein SEC61 alpha subunit 56 3e-08
27SC61A_ASHGO (Q752H7) Protein transport protein SEC61 alpha subunit 55 6e-08
28SECY_PYRHO (O59442) Preprotein translocase secY subunit (Protein... 55 1e-07
29SECY_PYRFU (Q8U019) Preprotein translocase secY subunit (Protein... 54 1e-07
30SC61A_CANGA (Q6FRY3) Protein transport protein SEC61 alpha subunit 54 2e-07
31SC61A_KLULA (Q6CPY9) Protein transport protein SEC61 alpha subunit 54 2e-07
32SECY_PYRAB (Q9V1V8) Preprotein translocase secY subunit (Protein... 53 4e-07
33SECY_ARCFU (O28377) Preprotein translocase secY subunit (Protein... 52 6e-07
34SC61A_YEAST (P32915) Protein transport protein SEC61 alpha subunit 52 8e-07
35SC61A_SCHPO (P79088) Protein transport protein sec61 alpha subunit 50 3e-06
36SECY_METVA (P28541) Preprotein translocase secY subunit (Protein... 49 5e-06
37SECY_METJA (Q60175) Preprotein translocase secY subunit (Protein... 48 9e-06
38SECY_AERPE (Q9YDD0) Preprotein translocase secY subunit (Protein... 48 1e-05
39SECY_SULSO (Q9UX84) Preprotein translocase secY subunit (Protein... 47 3e-05
40SECY_SULAC (P49978) Preprotein translocase secY subunit (Protein... 46 4e-05
41SECY_METTH (O26134) Preprotein translocase secY subunit (Protein... 45 8e-05
42SECY_HALVO (Q977V3) Preprotein translocase secY subunit (Protein... 45 1e-04
43SECY_HALMA (P28542) Preprotein translocase secY subunit (Protein... 44 1e-04
44SECY_HALSA (Q9HPB1) Preprotein translocase secY subunit (Protein... 44 2e-04
45CNTN5_CHICK (Q90W79) Contactin-5 precursor (F11 axonin-1-related... 31 1.5
46ISW1_CAEEL (P41877) Chromatin remodelling complex ATPase chain i... 31 1.5
47FER1_CAEEL (Q17388) Sperm vesicle fusion protein fer-1 29 5.7
48AF10_MOUSE (O54826) Protein AF-10 28 9.7 
>S61A2_MOUSE (Q9JLR1) Protein transport protein Sec61 alpha subunit isoform 2|
           (Sec61 alpha-2)
          Length = 475

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G  G
Sbjct: 421 AFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 471
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>S61A2_HUMAN (Q9H9S3) Protein transport protein Sec61 alpha subunit isoform 2|
           (Sec61 alpha-2)
          Length = 475

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G  G
Sbjct: 421 AFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 471
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>SC61A_HALRO (Q25147) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 82.0 bits (201), Expect = 6e-16
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G  G
Sbjct: 421 AFGGLCIGALSVLADFIGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 471
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>S61A1_RAT (P61621) Protein transport protein Sec61 alpha subunit isoform 1|
           (Sec61 alpha-1)
          Length = 475

 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 471
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>S61A1_PONPY (Q5R5L5) Protein transport protein Sec61 alpha subunit isoform 1|
           (Sec61 alpha-1)
          Length = 475

 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 471
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>S61A1_MOUSE (P61620) Protein transport protein Sec61 alpha subunit isoform 1|
           (Sec61 alpha-1)
          Length = 475

 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 471
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>S61A1_HUMAN (P61619) Protein transport protein Sec61 alpha subunit isoform 1|
           (Sec61 alpha-1)
          Length = 475

 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 471
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>S61A1_CANFA (P38377) Protein transport protein Sec61 alpha subunit isoform 1|
           (Sec61 alpha-1)
          Length = 475

 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 471
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>SC61A_PAGBO (Q8AY36) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 471
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>SC61A_NOTAN (Q8AY35) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 471
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>SC61A_HARAN (Q7T278) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 471
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>SC61A_GADOC (Q8AY32) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 471
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>SC61A_DISMA (Q7T277) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 471
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>SC61A_BORSA (Q8AY33) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 471
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>S61A2_ONCMY (Q98SN8) Protein transport protein Sec61 alpha subunit isoform B|
          Length = 475

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 471
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>S61A1_ONCMY (Q98SN9) Protein transport protein Sec61 alpha subunit isoform A|
          Length = 475

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 471
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>SC61A_HEMAM (Q8AY34) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 471
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>SC61A_BOVVA (Q8AY31) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 471
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>S61A1_BRARE (Q90ZM2) Protein transport protein Sec61 alpha subunit isoform A|
          Length = 475

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 471
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>S61A2_BRARE (Q90YL4) Protein transport protein Sec61 alpha subunit isoform B|
          Length = 475

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFG 278
           AFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G  G
Sbjct: 421 AFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSVG 471
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>SC61A_PYRSA (P38379) Protein transport protein Sec61 alpha subunit|
          Length = 494

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 32/39 (82%), Positives = 37/39 (94%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFET 317
           AFGG+CIGAL+++ADFMGAIGSGTGILLAVT IYQ +ET
Sbjct: 427 AFGGMCIGALSIVADFMGAIGSGTGILLAVTTIYQSWET 465
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>SC61A_NEUCR (Q870W0) Protein transport protein SEC61 alpha subunit|
          Length = 476

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 305
           AFGG CIGAL+V +D MGA+GSGTG LLAVTIIY YFE   KE
Sbjct: 422 AFGGACIGALSVASDLMGALGSGTGTLLAVTIIYGYFEIAAKE 464
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>SC61A_CANAL (Q9P8E3) Protein transport protein SEC61 alpha subunit|
          Length = 479

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 305
           AFGG  IGAL+V+ D MG +GSGT ILLAVT IY Y+E   KE
Sbjct: 422 AFGGATIGALSVVCDLMGTLGSGTSILLAVTTIYGYYELAVKE 464
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>SC61A_YARLI (P78979) Protein transport protein SEC61 alpha subunit|
          Length = 471

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 305
           AFGG  IGAL+V +D +GA+ SGTGIL+AVT IY Y+E   KE
Sbjct: 422 AFGGATIGALSVASDLLGALSSGTGILMAVTTIYGYYEMAAKE 464
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>SC61A_HANAN (Q96TW8) Protein transport protein SEC61 alpha subunit|
          Length = 479

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 27/43 (62%), Positives = 31/43 (72%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 305
           AFGG  IGAL+V  D +G +GSGT ILLAVT IY Y+E   KE
Sbjct: 422 AFGGASIGALSVACDLLGTLGSGTSILLAVTTIYSYYEIAAKE 464
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>SC61A_DEBHA (Q6BN08) Protein transport protein SEC61 alpha subunit|
          Length = 479

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 27/43 (62%), Positives = 31/43 (72%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 305
           AFGG  IGAL+V  D MG +GSGT ILL+VT IY Y+E   KE
Sbjct: 422 AFGGATIGALSVFCDLMGTLGSGTSILLSVTTIYGYYELAMKE 464
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>SC61A_ASHGO (Q752H7) Protein transport protein SEC61 alpha subunit|
          Length = 480

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 305
           AFGG  IGAL+V +D +G +GSGT IL+A T IY Y+ET  KE
Sbjct: 423 AFGGATIGALSVGSDLLGTLGSGTSILMATTTIYGYYETAAKE 465
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>SECY_PYRHO (O59442) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 468

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 22/47 (46%), Positives = 37/47 (78%)
 Frame = -2

Query: 430 FGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 290
           +G + +  ++VLADF+GA+G+GTGILL V I+Y+++E   +E+ TE+
Sbjct: 412 WGSLTVALISVLADFLGALGTGTGILLTVGILYRFYEEIAREQITEM 458
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>SECY_PYRFU (Q8U019) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 468

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 22/47 (46%), Positives = 36/47 (76%)
 Frame = -2

Query: 430 FGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 290
           +G + +  + VLADF+GA+G+GTGILL V I+Y+++E   +E+ TE+
Sbjct: 412 WGSLTVALIAVLADFLGALGTGTGILLTVGILYRFYEEIAREQITEM 458
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>SC61A_CANGA (Q6FRY3) Protein transport protein SEC61 alpha subunit|
          Length = 479

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 305
           AFGG  IGAL+V +D +GA+GSG  ILLA T IY Y+E   KE
Sbjct: 422 AFGGATIGALSVGSDLLGALGSGASILLATTTIYGYYEVAAKE 464
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>SC61A_KLULA (Q6CPY9) Protein transport protein SEC61 alpha subunit|
          Length = 480

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 305
           AFGG  IGAL+V +D +G +GSGT IL+A T IY Y+E   KE
Sbjct: 423 AFGGAVIGALSVGSDLLGTLGSGTSILMATTTIYGYYEVAAKE 465
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>SECY_PYRAB (Q9V1V8) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 468

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 21/47 (44%), Positives = 36/47 (76%)
 Frame = -2

Query: 430 FGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 290
           +G + +  + VLADF+GA+G+GTGILL V I+Y+++E   +E+ +E+
Sbjct: 412 WGSLTVALIAVLADFLGALGTGTGILLTVGILYRFYEEIAREQISEM 458
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>SECY_ARCFU (O28377) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 493

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
 Frame = -2

Query: 427 GGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERATEL 290
           GG  IG LT++A+ +G IG  SGTG+LLAV+I Y+++E   KE+ TE+
Sbjct: 434 GGAIIGILTLVANMLGTIGNVSGTGLLLAVSIAYRFYEDLAKEQLTEM 481
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>SC61A_YEAST (P32915) Protein transport protein SEC61 alpha subunit|
          Length = 480

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = -2

Query: 433 AFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 305
           AFGG  IGAL+V +D +G +GSG  IL+A T IY Y+E   KE
Sbjct: 423 AFGGATIGALSVGSDLLGTLGSGASILMATTTIYGYYEAAAKE 465
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>SC61A_SCHPO (P79088) Protein transport protein sec61 alpha subunit|
          Length = 479

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = -2

Query: 424 GVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 305
           G  +GAL V +D +GA+GSGT +LL  T IY Y+E  +KE
Sbjct: 425 GAVVGALAVASDLLGALGSGTAVLLCTTTIYGYYEQLQKE 464
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>SECY_METVA (P28541) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 438

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 21/46 (45%), Positives = 31/46 (67%)
 Frame = -2

Query: 427 GGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 290
           G   +G L   ADF GA+G GTG+LL V+I+Y+ +E   +E+ +EL
Sbjct: 382 GSAFVGFLAAAADFTGALGGGTGVLLTVSIVYRLYEQLVQEQLSEL 427
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>SECY_METJA (Q60175) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 436

 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 19/42 (45%), Positives = 32/42 (76%)
 Frame = -2

Query: 415 IGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 290
           +G L  +A+F+GA+G GTG+LL V+I+Y+ +E   +E+ +EL
Sbjct: 385 VGFLATIANFIGALGGGTGVLLTVSIVYRMYEQLLREKVSEL 426
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>SECY_AERPE (Q9YDD0) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 494

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = -2

Query: 415 IGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATE 293
           + AL ++AD  GA G+GTG+LLAV II QY+    +ERA E
Sbjct: 440 VAALVIVADIFGAYGTGTGLLLAVGIINQYYAMITRERALE 480
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>SECY_SULSO (Q9UX84) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 469

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 21/47 (44%), Positives = 29/47 (61%)
 Frame = -2

Query: 430 FGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 290
           F  + +G + V A  +GA G+G GILLAVTI  QY+     ER+ E+
Sbjct: 413 FSSIIVGLIAVFATLLGAYGTGIGILLAVTIAIQYYSLLAYERSLEM 459
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>SECY_SULAC (P49978) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 463

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = -2

Query: 430 FGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 290
           F  + +G + V+A F+G  G+G G+LLA+TI  QY+     ER  E+
Sbjct: 407 FSSLIVGLIAVVATFLGTYGTGVGLLLAITIAMQYYNLLAYERTLEM 453
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>SECY_METTH (O26134) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 456

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 18/46 (39%), Positives = 30/46 (65%)
 Frame = -2

Query: 427 GGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 290
           GG  +G L  +AD  G++G GTG+LL V I+Y+ +E   +E+  ++
Sbjct: 401 GGAFVGLLAFVADLTGSLGGGTGVLLTVGIVYRLYEEIAQEQLMDM 446
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>SECY_HALVO (Q977V3) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 488

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
 Frame = -2

Query: 427 GGVCIGALTVLADFMGAIG-SGTGILLAVTIIYQYFETFEKERATEL 290
           GG  +G L V+A+ +G IG SGTG+LL V+I Y+ +E   +E+  E+
Sbjct: 431 GGALVGLLAVMANMLGTIGASGTGLLLTVSITYKLYEEIAEEQLMEM 477
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>SECY_HALMA (P28542) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 487

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = -2

Query: 427 GGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERATEL 290
           GG  +G L V+A+ +G IG  SGTG+LL V+I Y+ +E   +E+  E+
Sbjct: 431 GGALVGLLAVMANMLGTIGGVSGTGLLLTVSITYKLYEEIAEEQLMEM 478
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>SECY_HALSA (Q9HPB1) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 491

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = -2

Query: 427 GGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERATEL 290
           GG  +G L V+A+ +G IG  SGTG+LL ++I Y+ +E   +E+  E+
Sbjct: 432 GGALVGLLAVMANMLGTIGNVSGTGLLLTISITYKLYEEIAEEQMMEM 479
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>CNTN5_CHICK (Q90W79) Contactin-5 precursor (F11 axonin-1-related protein 2)|
           (FAR-2)
          Length = 1027

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 291 SSVALSFSKVSKYWYMMVTANRIPVPEPIAPMKSARTVNAPMHTPP 428
           S++A+  +   +Y + +V  N+I   +P AP +  RT  A   TPP
Sbjct: 659 SAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPP 704
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>ISW1_CAEEL (P41877) Chromatin remodelling complex ATPase chain isw-1 (EC|
           3.6.1.-)
          Length = 1009

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 279 PKKPSSVALSFSKVSKYWYMMVTANRIPVPEPIAPMKSARTVNAPMH 419
           PKK   V +  SK+ + WY  V    I +      ++ AR +N  MH
Sbjct: 358 PKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMH 404
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>FER1_CAEEL (Q17388) Sperm vesicle fusion protein fer-1|
          Length = 2034

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = -3

Query: 129  ICRCCV-CFQASY--GGRLVQARAWPSPVIF 46
            +C+CC+ CF+     G R V+ + +P PV+F
Sbjct: 1854 LCKCCIFCFETKCLCGKRKVKKKPFPKPVLF 1884
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>AF10_MOUSE (O54826) Protein AF-10|
          Length = 1068

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = +1

Query: 28  KHEKSTEDDR*RPRPCLDQSTTITGLKTHAASTDFSTVNKSGNLNRI 168
           KH+K  E     P P L  S T+T  KT+ ++++ S    SG+LNR+
Sbjct: 244 KHKKQPE-----PSPALVPSLTVTTEKTYTSTSNNSI---SGSLNRL 282


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,275,862
Number of Sequences: 219361
Number of extensions: 1302610
Number of successful extensions: 3085
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 3008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3083
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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