ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6a14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (... 136 7e-32
2BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (... 132 7e-31
3BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (... 111 2e-24
4BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.... 73 9e-13
5BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (... 71 3e-12
6LEG_ANTCR (P22031) D-galactoside-specific lectin (Sea urchin egg... 32 1.8
7SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 32 2.3
8EMF2_ARATH (Q8L6Y4) Polycomb protein EMBRYONIC FLOWER 2 31 3.1
9SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 30 5.2
10SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UD... 30 5.2

>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
          Length = 832

 Score =  136 bits (342), Expect = 7e-32
 Identities = 75/181 (41%), Positives = 99/181 (54%), Gaps = 6/181 (3%)
 Frame = -1

Query: 659  SGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPSKISFT 480
            SG   SC+YRG+Y+  KCL  CG+ SQ  YHVPRS+L P  N +V+ E++GG+P+ IS  
Sbjct: 657  SGSCGSCDYRGTYNEKKCLSNCGEASQRWYHVPRSWLIPTGNFLVVLEEWGGDPTGISMV 716

Query: 479  TKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECPKEGQVISSIKFASFGTPSG 300
             +   SVCA V E  P  +D+W +         P + L C   GQ +S IKFASFGTP G
Sbjct: 717  KRSVASVCAEVEELQP-TMDNWRTKAY----GRPKVHLSC-DPGQKMSKIKFASFGTPQG 770

Query: 299  TCGSYSHGECSSSQALAVAQEAXXXXXXXXXXXSAKNF------GDPCRGVTKSLVVEAA 138
            TCGS+S G C + ++    ++             + N       GDPC G  K L VEA 
Sbjct: 771  TCGSFSEGSCHAHKSYDAFEQEGLMQNCVGQEFCSVNVAPEVFGGDPCPGTMKKLAVEAI 830

Query: 137  C 135
            C
Sbjct: 831  C 831



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>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
            beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase)
          Length = 835

 Score =  132 bits (333), Expect = 7e-31
 Identities = 74/178 (41%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
 Frame = -1

Query: 659  SGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPSKISFT 480
            SG  + CNY G +   KCL  CG+ SQ  YHVPRS+L P  N +V+FE++GG+P  I+  
Sbjct: 659  SGSCSVCNYTGWFDEKKCLTNCGEGSQRWYHVPRSWLYPTGNLLVVFEEWGGDPYGITLV 718

Query: 479  TKQTESVCAHVSEDHPDQIDSWVSSQQKLQRS-GPALRLECPKEGQVISSIKFASFGTPS 303
             ++  SVCA + E  P  ++       K  R   P   L+C   GQ ISSIKFASFGTP 
Sbjct: 719  KREIGSVCADIYEWQPQLLNWQRLVSGKFDRPLRPKAHLKC-APGQKISSIKFASFGTPE 777

Query: 302  GTCGSYSHGECSSSQALAVAQEAXXXXXXXXXXXSAKNF-GDPCRGVTKSLVVEAACS 132
            G CG++  G C + ++    ++            + +NF GDPCR V K L VEA CS
Sbjct: 778  GVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPENFGGDPCRNVLKKLSVEAICS 835



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>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
          Length = 828

 Score =  111 bits (277), Expect = 2e-24
 Identities = 67/186 (36%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
 Frame = -1

Query: 680  PTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFL-QPGSNDIVLFEQFGG 504
            P+  +   GC   C+YRG Y + KC   CG+P+Q  YHVPRSFL   G N I LFE+ GG
Sbjct: 664  PSFNSSDEGCTEECDYRGEYGSDKCAFMCGKPTQRWYHVPRSFLNDKGHNTITLFEEMGG 723

Query: 503  NPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECPKEGQVISSIKF 324
            +PS + F T  T  VCA   E +                     ++E     + IS++KF
Sbjct: 724  DPSMVKFKTVVTGRVCAKAHEHN---------------------KVELSCNNRPISAVKF 762

Query: 323  ASFGTPSGTCGSYSHGECSSSQ-ALAVAQEAXXXXXXXXXXXSAKNFGD--PCRGVTKSL 153
            ASFG PSG CGS++ G C  ++ A+ V  +            S+  FG    C    K L
Sbjct: 763  ASFGNPSGQCGSFAAGSCEGAKDAVKVVAKECVGKLNCTMNVSSHKFGSNLDCGDSPKRL 822

Query: 152  VVEAAC 135
             VE  C
Sbjct: 823  FVEVEC 828



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>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)|
           (Lactase) (SR12 protein)
          Length = 731

 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = -1

Query: 674 NIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPS 495
           NIA  S C ++CNY G+Y+ TKCL  CG+ SQ  YHVPRS+LQP  N +V+FE++GG+  
Sbjct: 663 NIAKGS-CNDNCNYAGTYTETKCLSDCGKSSQKWYHVPRSWLQPRGNLLVVFEEWGGDTK 721

Query: 494 KISFTTK 474
            +S   +
Sbjct: 722 WVSLVKR 728



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>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase)
          Length = 731

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 30/63 (47%), Positives = 42/63 (66%)
 Frame = -1

Query: 656 GCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPSKISFTT 477
           G    C+Y G+Y   KC   CG+PSQ  YH+PRS+L P  N +V+FE++GG+PS+IS   
Sbjct: 662 GSCGDCSYAGTYDDKKCRTHCGEPSQRWYHIPRSWLTPTGNLLVVFEEWGGDPSRISLVE 721

Query: 476 KQT 468
           + T
Sbjct: 722 RGT 724



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>LEG_ANTCR (P22031) D-galactoside-specific lectin (Sea urchin egg lectin)|
           (SUEL)
          Length = 105

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
 Frame = -1

Query: 377 ALRLECPK-EGQVISSIKFASFGTPSGTC-----GSYSHG-ECSSSQALAVAQEAXXXXX 219
           +L + CP+ EG VI     A +G   G       G+++   +C SS +  V + +     
Sbjct: 18  SLTISCPEGEGIVIYD---AIYGRKRGEVCPGLFGAFTKNRKCRSSNSQQVVENSCEGKS 74

Query: 218 XXXXXXSAKNFGDPCRGVTKSLVVEAACS 132
                 S   FGDPC G  K L V   CS
Sbjct: 75  SCTVLASNSVFGDPCPGTAKYLAVTYICS 103



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>SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (Nodulin-100)
          Length = 805

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = -1

Query: 416 WVSSQQKLQRSGPALRLECPKEGQVISSIKFASFG---TPSGTCGSYSHGECSSSQA 255
           W+SSQ    R+G   R+ C   G  +    + +FG     + TCG  +   C+   A
Sbjct: 642 WISSQMNRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPA 698



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>EMF2_ARATH (Q8L6Y4) Polycomb protein EMBRYONIC FLOWER 2|
          Length = 631

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
 Frame = -1

Query: 623 YSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPSKISFTTKQTESVCAHVS 444
           +S   CL KC     + YH+      P ++D++ FE +     +    + +TE++ + V+
Sbjct: 324 FSCPFCLVKCASFKGLRYHL------PSTHDLLNFEFWVTEEFQAVNVSLKTETMISKVN 377

Query: 443 ED--HPDQIDSWVS----------SQQKLQRSGPALRLEC 360
           ED   P Q   + S          SQ +  R GP L L C
Sbjct: 378 EDDVDPKQQTFFFSSKKFRRRRQKSQVRSSRQGPHLGLGC 417



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>SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 806

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = -1

Query: 416 WVSSQQKLQRSGPALRLECPKEGQVISSIKFASFG---TPSGTCGSYSHGECSSSQA 255
           W+SSQ    R+G   R  C  +G  +    + +FG     + TCG  +   C    A
Sbjct: 644 WISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 700



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>SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 816

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = -1

Query: 506 GNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECPKEGQVISSIK 327
           GNPSK      + + +   + + + +    W+S+Q    R+G   R  C  +G  +    
Sbjct: 617 GNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAF 676

Query: 326 FASFG---TPSGTCG 291
           + +FG     S TCG
Sbjct: 677 YEAFGLTVVESMTCG 691


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,594,947
Number of Sequences: 219361
Number of extensions: 2197158
Number of successful extensions: 6629
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6620
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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