| Clone Name | rbaal6a14 |
|---|---|
| Clone Library Name | barley_pub |
>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 832 Score = 136 bits (342), Expect = 7e-32 Identities = 75/181 (41%), Positives = 99/181 (54%), Gaps = 6/181 (3%) Frame = -1 Query: 659 SGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPSKISFT 480 SG SC+YRG+Y+ KCL CG+ SQ YHVPRS+L P N +V+ E++GG+P+ IS Sbjct: 657 SGSCGSCDYRGTYNEKKCLSNCGEASQRWYHVPRSWLIPTGNFLVVLEEWGGDPTGISMV 716 Query: 479 TKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECPKEGQVISSIKFASFGTPSG 300 + SVCA V E P +D+W + P + L C GQ +S IKFASFGTP G Sbjct: 717 KRSVASVCAEVEELQP-TMDNWRTKAY----GRPKVHLSC-DPGQKMSKIKFASFGTPQG 770 Query: 299 TCGSYSHGECSSSQALAVAQEAXXXXXXXXXXXSAKNF------GDPCRGVTKSLVVEAA 138 TCGS+S G C + ++ ++ + N GDPC G K L VEA Sbjct: 771 TCGSFSEGSCHAHKSYDAFEQEGLMQNCVGQEFCSVNVAPEVFGGDPCPGTMKKLAVEAI 830 Query: 137 C 135 C Sbjct: 831 C 831
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 132 bits (333), Expect = 7e-31 Identities = 74/178 (41%), Positives = 99/178 (55%), Gaps = 2/178 (1%) Frame = -1 Query: 659 SGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPSKISFT 480 SG + CNY G + KCL CG+ SQ YHVPRS+L P N +V+FE++GG+P I+ Sbjct: 659 SGSCSVCNYTGWFDEKKCLTNCGEGSQRWYHVPRSWLYPTGNLLVVFEEWGGDPYGITLV 718 Query: 479 TKQTESVCAHVSEDHPDQIDSWVSSQQKLQRS-GPALRLECPKEGQVISSIKFASFGTPS 303 ++ SVCA + E P ++ K R P L+C GQ ISSIKFASFGTP Sbjct: 719 KREIGSVCADIYEWQPQLLNWQRLVSGKFDRPLRPKAHLKC-APGQKISSIKFASFGTPE 777 Query: 302 GTCGSYSHGECSSSQALAVAQEAXXXXXXXXXXXSAKNF-GDPCRGVTKSLVVEAACS 132 G CG++ G C + ++ ++ + +NF GDPCR V K L VEA CS Sbjct: 778 GVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPENFGGDPCRNVLKKLSVEAICS 835
>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 828 Score = 111 bits (277), Expect = 2e-24 Identities = 67/186 (36%), Positives = 89/186 (47%), Gaps = 4/186 (2%) Frame = -1 Query: 680 PTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFL-QPGSNDIVLFEQFGG 504 P+ + GC C+YRG Y + KC CG+P+Q YHVPRSFL G N I LFE+ GG Sbjct: 664 PSFNSSDEGCTEECDYRGEYGSDKCAFMCGKPTQRWYHVPRSFLNDKGHNTITLFEEMGG 723 Query: 503 NPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECPKEGQVISSIKF 324 +PS + F T T VCA E + ++E + IS++KF Sbjct: 724 DPSMVKFKTVVTGRVCAKAHEHN---------------------KVELSCNNRPISAVKF 762 Query: 323 ASFGTPSGTCGSYSHGECSSSQ-ALAVAQEAXXXXXXXXXXXSAKNFGD--PCRGVTKSL 153 ASFG PSG CGS++ G C ++ A+ V + S+ FG C K L Sbjct: 763 ASFGNPSGQCGSFAAGSCEGAKDAVKVVAKECVGKLNCTMNVSSHKFGSNLDCGDSPKRL 822 Query: 152 VVEAAC 135 VE C Sbjct: 823 FVEVEC 828
>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)| (Lactase) (SR12 protein) Length = 731 Score = 72.8 bits (177), Expect = 9e-13 Identities = 34/67 (50%), Positives = 47/67 (70%) Frame = -1 Query: 674 NIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPS 495 NIA S C ++CNY G+Y+ TKCL CG+ SQ YHVPRS+LQP N +V+FE++GG+ Sbjct: 663 NIAKGS-CNDNCNYAGTYTETKCLSDCGKSSQKWYHVPRSWLQPRGNLLVVFEEWGGDTK 721 Query: 494 KISFTTK 474 +S + Sbjct: 722 WVSLVKR 728
>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 731 Score = 71.2 bits (173), Expect = 3e-12 Identities = 30/63 (47%), Positives = 42/63 (66%) Frame = -1 Query: 656 GCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPSKISFTT 477 G C+Y G+Y KC CG+PSQ YH+PRS+L P N +V+FE++GG+PS+IS Sbjct: 662 GSCGDCSYAGTYDDKKCRTHCGEPSQRWYHIPRSWLTPTGNLLVVFEEWGGDPSRISLVE 721 Query: 476 KQT 468 + T Sbjct: 722 RGT 724
>LEG_ANTCR (P22031) D-galactoside-specific lectin (Sea urchin egg lectin)| (SUEL) Length = 105 Score = 32.0 bits (71), Expect = 1.8 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 7/89 (7%) Frame = -1 Query: 377 ALRLECPK-EGQVISSIKFASFGTPSGTC-----GSYSHG-ECSSSQALAVAQEAXXXXX 219 +L + CP+ EG VI A +G G G+++ +C SS + V + + Sbjct: 18 SLTISCPEGEGIVIYD---AIYGRKRGEVCPGLFGAFTKNRKCRSSNSQQVVENSCEGKS 74 Query: 218 XXXXXXSAKNFGDPCRGVTKSLVVEAACS 132 S FGDPC G K L V CS Sbjct: 75 SCTVLASNSVFGDPCPGTAKYLAVTYICS 103
>SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Nodulin-100) Length = 805 Score = 31.6 bits (70), Expect = 2.3 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Frame = -1 Query: 416 WVSSQQKLQRSGPALRLECPKEGQVISSIKFASFG---TPSGTCGSYSHGECSSSQA 255 W+SSQ R+G R+ C G + + +FG + TCG + C+ A Sbjct: 642 WISSQMNRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPA 698
>EMF2_ARATH (Q8L6Y4) Polycomb protein EMBRYONIC FLOWER 2| Length = 631 Score = 31.2 bits (69), Expect = 3.1 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%) Frame = -1 Query: 623 YSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPSKISFTTKQTESVCAHVS 444 +S CL KC + YH+ P ++D++ FE + + + +TE++ + V+ Sbjct: 324 FSCPFCLVKCASFKGLRYHL------PSTHDLLNFEFWVTEEFQAVNVSLKTETMISKVN 377 Query: 443 ED--HPDQIDSWVS----------SQQKLQRSGPALRLEC 360 ED P Q + S SQ + R GP L L C Sbjct: 378 EDDVDPKQQTFFFSSKKFRRRRQKSQVRSSRQGPHLGLGC 417
>SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 806 Score = 30.4 bits (67), Expect = 5.2 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Frame = -1 Query: 416 WVSSQQKLQRSGPALRLECPKEGQVISSIKFASFG---TPSGTCGSYSHGECSSSQA 255 W+SSQ R+G R C +G + + +FG + TCG + C A Sbjct: 644 WISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 700
>SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = -1 Query: 506 GNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECPKEGQVISSIK 327 GNPSK + + + + + + + W+S+Q R+G R C +G + Sbjct: 617 GNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAF 676 Query: 326 FASFG---TPSGTCG 291 + +FG S TCG Sbjct: 677 YEAFGLTVVESMTCG 691 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,594,947 Number of Sequences: 219361 Number of extensions: 2197158 Number of successful extensions: 6629 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 6296 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6620 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)