ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal5l13 |
|---|---|
| Clone Library Name | barley_pub |
>PA21B_CAVPO (P43434) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 146 Score = 36.6 bits (83), Expect = 0.078 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Frame = +2 Query: 11 IGALVAAIAPVHQXTSLIKYIMLRSIWSFQHCESASL--NTPYWGLTIYDMFCCHHAQVP 184 + AL++ A H T R++W F+ ++ + PY Y FC Sbjct: 6 LAALLSVSAAAHIITP-------RALWQFRDMIKCAIPGSRPYSEYNNYGCFCGL----- 53 Query: 185 *TCHGRRGIAIDILPQICQLHDERRTCTTNVDKCSTMVDTSHTYS 319 G G +D L + C++HD T +++ C +++D +T S Sbjct: 54 ----GGSGTPVDELDRCCEIHDACYTQAKHLESCKSVIDNPYTNS 94
>PA2_RABIT (Q7M334) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 144 Score = 34.3 bits (77), Expect = 0.39 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Frame = +2 Query: 83 SIWSFQHCESASL--NTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHDER 256 ++W F+ ++ ++PY Y +C G G +D L + CQ HD+ Sbjct: 23 ALWQFRGMIQCTIPGSSPYLEFNGYGCYCGL---------GGSGTPVDELDRCCQTHDQC 73 Query: 257 RTCTTNVDKCSTMVDTSHTYS 319 T + CS +VD +T S Sbjct: 74 YTQAKKLSSCSFLVDNPYTNS 94
>PA21B_BOVIN (P00593) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 145 Score = 34.3 bits (77), Expect = 0.39 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = +2 Query: 197 GRRGIAIDILPQICQLHDERRTCTTNVDKCSTMVDTSHT----YSSNSGDIDASRE 352 G G +D L + CQ HD +D C +VD +T YS ++ +I S E Sbjct: 54 GGSGTPVDDLDRCCQTHDNCYKQAKKLDSCKVLVDNPYTNNYSYSCSNNEITCSSE 109
>PA21B_HORSE (P00594) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) [Contains: Phospholipase A2 isoform 2] (Fragment) Length = 132 Score = 33.9 bits (76), Expect = 0.50 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 2/82 (2%) Frame = +2 Query: 80 RSIWSFQHCESASL--NTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHDE 253 R++W F+ ++ + PY Y +C G G +D L CQ+HD Sbjct: 7 RAVWQFRSMIQCTIPNSKPYLEFNDYGCYCGL---------GGSGTPVDELDACCQVHDN 57 Query: 254 RRTCTTNVDKCSTMVDTSHTYS 319 T + C +VD +T S Sbjct: 58 CYTQAKELSSCRFLVDNPYTES 79
>PA21B_NAJME (P00599) Phospholipase A2 isozyme DE-I (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 33.5 bits (75), Expect = 0.66 Identities = 19/72 (26%), Positives = 30/72 (41%) Frame = +2 Query: 122 NTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHDERRTCTTNVDKCSTMVD 301 N P+W Y +C G +G +D L + CQ+HD+ + C + Sbjct: 15 NRPWWHFANYGCYCGR---------GGKGTPVDDLDRCCQIHDKCYDEAEKISGCWPYIK 65 Query: 302 TSHTYSSNSGDI 337 T +TY S G + Sbjct: 66 T-YTYESCQGTL 76
>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)| (NADPH thyroid oxidase 1) (Blistered cuticle protein 3) Length = 1497 Score = 33.1 bits (74), Expect = 0.86 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +2 Query: 287 STMVDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLL 412 ST+VD SS+S R+++ W CST ++ WF +L Sbjct: 1339 STLVDLVQRTSSDSFHRVRCRKVYFLWVCSTHKNYEWFVDVL 1380
>PA21B_SHEEP (P14419) Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine| 2-acylhydrolase) (Group IB phospholipase A2) Length = 123 Score = 33.1 bits (74), Expect = 0.86 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = +2 Query: 197 GRRGIAIDILPQICQLHDERRTCTTNVDKCSTMVD----TSHTYSSNSGDIDASRE 352 G G +D L + CQ HD +D C +VD S++YS ++ I S E Sbjct: 32 GGSGTPVDDLDRCCQTHDNCYKQAKKLDSCKVLVDNPYTNSYSYSCSNKQITCSSE 87
>PA2B_MICNI (P81167) Phospholipase A2 (EC 3.1.1.4) (Nigroxin B)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 33.1 bits (74), Expect = 0.86 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +2 Query: 122 NTPYW-GLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHDERRTCTTNVDKCSTMV 298 NT +W T Y +C + G G +D L + CQ+HD+ +V KCS + Sbjct: 13 NTRHWVSFTNYGCYCGY---------GGSGTPVDELDKCCQVHDKCYDTAKHVCKCSPSM 63 Query: 299 DTSHTYSSNSGDI 337 T ++Y + G + Sbjct: 64 -TMYSYDCSEGKL 75
>PA2A_MICNI (P81166) Phospholipase A2 (EC 3.1.1.4) (Nigroxin A)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 33.1 bits (74), Expect = 0.86 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +2 Query: 122 NTPYW-GLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHDERRTCTTNVDKCSTMV 298 NT +W T Y +C + G G +D L + CQ+HD+ +V KCS + Sbjct: 13 NTRHWVSFTNYGCYCGY---------GGSGTPVDELDKCCQVHDKCYDTAKHVCKCSPSM 63 Query: 299 DTSHTYSSNSGDI 337 T ++Y + G + Sbjct: 64 -TMYSYDCSEGKL 75
>SNX41_ASHGO (Q759T1) Sorting nexin-41| Length = 603 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 314 YSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVALAPS 472 + +N DI RE H + + W LL PP+S+LPT++L L P+ Sbjct: 215 FLNNCHDITDIRE-HTVFQKFLNPEYIWSEVLLTPPVSILPTNNLLAPPLNPT 266
>PA21B_PIG (P00592) Phospholipase A2, major isoenzyme precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 146 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 2/85 (2%) Frame = +2 Query: 71 IMLRSIWSFQHCESASL--NTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQL 244 I R++W F+ ++ + P Y +C G G +D L + C+ Sbjct: 19 ISSRALWQFRSMIKCAIPGSHPLMDFNNYGCYCGL---------GGSGTPVDELDRCCET 69 Query: 245 HDERRTCTTNVDKCSTMVDTSHTYS 319 HD N+D C +VD +T S Sbjct: 70 HDNCYRDAKNLDSCKFLVDNPYTES 94
>PA21B_MOUSE (Q9Z0Y2) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) (PLA2-Ib) Length = 146 Score = 32.3 bits (72), Expect = 1.5 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 6/118 (5%) Frame = +2 Query: 11 IGALVAAIAPVHQXTSLIKYIMLRSIWSFQHCESASL--NTPYWGLTIYDMFCCHHAQVP 184 + AL+ A A H I R++W F++ ++ + P Y +C Sbjct: 6 LAALLTAGAAAHS-------ISPRAVWQFRNMIKCTIPGSDPLKDYNNYGCYCGL----- 53 Query: 185 *TCHGRRGIAIDILPQICQLHDERRTCTTNVDKCSTMVDTSHT----YSSNSGDIDAS 346 G G +D L + CQ HD + ++ C ++D +T YS + +I S Sbjct: 54 ----GGWGTPVDDLDRCCQTHDHCYSQAKKLESCKFLIDNPYTNTYSYSCSGSEITCS 107
>PFA4_GIBZE (Q4IMZ7) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 437 Score = 32.3 bits (72), Expect = 1.5 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = +3 Query: 402 PPCWFHLYHCCRRAPWEESRWPHHCT*GLDCCACTTVPDF 521 PP H HC R P R HHC +C + TT P F Sbjct: 97 PPRAHHCRHCARCVP----RMDHHCPWTRNCVSMTTFPHF 132
>PA21B_CANFA (P06596) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 146 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 6/95 (6%) Frame = +2 Query: 80 RSIWSFQHCESASL--NTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHDE 253 R++W F++ ++ + P Y +C G G +D L + CQ HD Sbjct: 22 RAVWQFRNMIKCTIPESDPLKDYNDYGCYCGL---------GGSGTPVDELDKCCQTHDH 72 Query: 254 RRTCTTNVDKCSTMVDTSHT----YSSNSGDIDAS 346 + +D C ++D +T YS + +I S Sbjct: 73 CYSEAKKLDSCKFLLDNPYTKIYSYSCSGSEITCS 107
>YCF1A_ANTFO (Q85BK9) Hypothetical 58 kDa protein ycf1 (ORF473)| Length = 473 Score = 32.0 bits (71), Expect = 1.9 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = -1 Query: 630 QKMFYTIHSRASSSRIGIDVPRVSERLRALLQLYSHENQAPS 505 QK FY+I + SSSR ++ R+++R R L LYS+ + S Sbjct: 99 QKEFYSIFASDSSSRYTREIERLNKRYRCNLFLYSYLDHTKS 140
>PA22_PIG (P04416) Phospholipase A2, minor isoenzyme (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 124 Score = 31.6 bits (70), Expect = 2.5 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +2 Query: 197 GRRGIAIDILPQICQLHDERRTCTTNVDKCSTMVDTSHTYS 319 G G +D L + C+ HD N+D C +VD +T S Sbjct: 32 GGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTNS 72
>PA21B_HUMAN (P04054) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 148 Score = 31.6 bits (70), Expect = 2.5 Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 4/84 (4%) Frame = +2 Query: 80 RSIWSFQHCESASL--NTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHDE 253 R++W F+ + + P+ Y +C G G +D L + CQ HD Sbjct: 22 RAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGL---------GGSGTPVDELDKCCQTHDN 72 Query: 254 RRTCTTNVDKCSTMVDT--SHTYS 319 +D C ++D +HTYS Sbjct: 73 CYDQAKKLDSCKFLLDNPYTHTYS 96
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 30.4 bits (67), Expect = 5.6 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%) Frame = -2 Query: 254 SHHVIGKSEEECLSQYLSCHGKFTAPVRG-----GNKTCHKSSNPNMGY 123 S H+ G S + L +Y + HG P RG G TCH SN Y Sbjct: 382 SEHLSGSSYRDALQRYGTSHG--APPARGPRMSYGGSTCHAYSNTRDRY 428
>MBTP1_CRIGR (Q9Z2A8) Membrane-bound transcription factor site 1 protease| precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1 protease) (Subtilisin/kexin-isozyme 1) (SKI-1) (Sterol-regulated luminal protease) Length = 1052 Score = 30.0 bits (66), Expect = 7.3 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -1 Query: 552 LRALLQLYSHENQAPSCMHNNQVLRYNDGANATPPKELVGNN 427 L ALLQ S+ PS H+ R GA PP+ + GN+ Sbjct: 863 LDALLQYTSYGVNPPSLSHSGNRQRPPSGAGLAPPERMEGNH 904
>PA22_ASPSC (P07037) Phospholipase A2 isozyme CM-II (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 119 Score = 30.0 bits (66), Expect = 7.3 Identities = 18/75 (24%), Positives = 29/75 (38%) Frame = +2 Query: 122 NTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHDERRTCTTNVDKCSTMVD 301 N +W Y FC + G G +D L + CQ HD + + C + Sbjct: 15 NRSWWHFADYGCFCGY---------GGSGTPVDELDRCCQTHDNCYSEAEKLSGCKPYIK 65 Query: 302 TSHTYSSNSGDIDAS 346 T ++Y + G + S Sbjct: 66 T-YSYDCSQGKLTCS 79
>MBTP1_RAT (Q9WTZ3) Membrane-bound transcription factor site 1 protease| precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1 protease) (Subtilisin/kexin isozyme 1) (SKI-1) Length = 1052 Score = 29.6 bits (65), Expect = 9.5 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -1 Query: 552 LRALLQLYSHENQAPSCMHNNQVLRYNDGANATPPKELVGNN 427 L ALLQ S+ PS H+ R GA PP+ + GN+ Sbjct: 863 LDALLQYTSYGVTPPSLSHSGNRQRPPSGAGLAPPERMEGNH 904
>MBTP1_MOUSE (Q9WTZ2) Membrane-bound transcription factor site 1 protease| precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1 protease) (Subtilisin/kexin isozyme 1) (SKI-1) (Sterol-regulated luminal protease) Length = 1052 Score = 29.6 bits (65), Expect = 9.5 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -1 Query: 552 LRALLQLYSHENQAPSCMHNNQVLRYNDGANATPPKELVGNN 427 L ALLQ S+ PS H+ R GA PP+ + GN+ Sbjct: 863 LDALLQYTSYGVTPPSLSHSGNRQRPPSGAGLAPPERMEGNH 904
>PA22_OPHHA (Q9DF33) Phospholipase A2, acidic 2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (APLA2-2) Length = 146 Score = 29.6 bits (65), Expect = 9.5 Identities = 17/70 (24%), Positives = 29/70 (41%) Frame = +2 Query: 128 PYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHDERRTCTTNVDKCSTMVDTS 307 P+W + Y +C G G +D L + CQ+HD T + +CS Sbjct: 45 PWWDYSDYGCYCGS---------GGSGTPVDELDRCCQVHDNCYTQAQQLTECSP-YSKR 94 Query: 308 HTYSSNSGDI 337 ++Y + G + Sbjct: 95 YSYDCSEGTL 104
>PA21B_RAT (P04055) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 146 Score = 29.6 bits (65), Expect = 9.5 Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Frame = +2 Query: 71 IMLRSIWSFQHCESASL--NTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQL 244 I R++W F++ ++ + P Y +C G G +D L + CQ Sbjct: 19 ISTRAVWQFRNMIKCTIPGSDPLREYNNYGCYCGL---------GGSGTPVDDLDRCCQT 69 Query: 245 HDERRTCTTNVDKCSTMVDTSHT 313 HD ++ C ++D +T Sbjct: 70 HDHCYNQAKKLESCKFLIDNPYT 92
>PA22_NAJMO (P00603) Phospholipase A2 isozyme CM-II (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 29.6 bits (65), Expect = 9.5 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = +2 Query: 101 HCESASLNTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHD 250 HC S P+W Y +C G +G A+D L + CQ+HD Sbjct: 10 HCTVPS--RPWWHFADYGCYCGR---------GGKGTAVDDLDRCCQVHD 48
>PA21B_NAJMO (P00602) Phospholipase A2 isozyme CM-I (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 29.6 bits (65), Expect = 9.5 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = +2 Query: 101 HCESASLNTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHD 250 HC S P+W Y +C G +G A+D L + CQ+HD Sbjct: 10 HCTVPS--RPWWHFADYGCYCGR---------GGKGTAVDDLDRCCQVHD 48
>PA22_NAJSG (P60044) Phospholipase A2 isoform 2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Fragment) Length = 126 Score = 29.6 bits (65), Expect = 9.5 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 1/78 (1%) Frame = +2 Query: 89 WSFQHCESASL-NTPYWGLTIYDMFCCHHAQVP*TCHGRRGIAIDILPQICQLHDERRTC 265 W F++ S ++ + +W Y +C G G +D L + CQ+HD C Sbjct: 10 WQFKNMISCTVPSRSWWDFADYGCYCGR---------GGSGTPVDDLDRCCQVHD---NC 57 Query: 266 TTNVDKCSTMVDTSHTYS 319 +K S TYS Sbjct: 58 YNEAEKISGCNPRFRTYS 75 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 114,598,766 Number of Sequences: 219361 Number of extensions: 2607661 Number of successful extensions: 6459 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 6219 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6457 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7196276819 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
