ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal5l12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PPNK_BUCBP (Q89AR9) Probable inorganic polyphosphate/ATP-NAD kin... 31 3.1
2PSTB_MYCLE (Q50046) Phosphate import ATP-binding protein pstB (E... 30 4.0

>PPNK_BUCBP (Q89AR9) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 292

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
 Frame = +1

Query: 97  SSILLP*ETHVMAELKQNCPSMVSKPSNS---AFVERIVRFF-LIHPTSFG*F 243
           S + L  + H+ +ELK +C S V  P NS    FV++  +F  L+HP ++  F
Sbjct: 227 SIVYLKFKKHIHSELKISCDSQVILPLNSKDNIFVKKSKKFLCLLHPKNYNYF 279



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>PSTB_MYCLE (Q50046) Phosphate import ATP-binding protein pstB (EC 3.6.3.27)|
           (Phosphate-transporting ATPase) (ABC phosphate
           transporter)
          Length = 258

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -1

Query: 532 MANHFDVLGVTIFFGTAMRLMNIQIGELSRRAWLGEGADLLNSDNLLRTYN 380
           MA   D+ GV I++G+   ++++ +  L R      GA       +LRT N
Sbjct: 1   MAKRLDLKGVNIYYGSFQAVLDVSLAVLPRSVTAFIGASGCGKTTVLRTLN 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,853,593
Number of Sequences: 219361
Number of extensions: 1816654
Number of successful extensions: 4595
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4595
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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