ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 30 5.6
2SUS1_DAUCA (P49035) Sucrose synthase isoform I (EC 2.4.1.13) (Su... 29 9.5

>SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (SS16)
          Length = 805

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 23/67 (34%), Positives = 36/67 (53%)
 Frame = +1

Query: 259 DVGCHRCQLLPGLPSHALERGQVLSGLEGDSVDQIRSTQIGIRIVRLLAKQIST*NGQRI 438
           D G     +L  +P  ALER ++L  ++   +D I    I   + RLL   + T  GQRI
Sbjct: 298 DTGGQVVYILDQVP--ALER-EMLKRIKEQGLDIIPRILI---VTRLLPDAVGTTCGQRI 351

Query: 439 QRIFGAE 459
           ++++GAE
Sbjct: 352 EKVYGAE 358



to top

>SUS1_DAUCA (P49035) Sucrose synthase isoform I (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1) (Susy*Dc1)
          Length = 808

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
 Frame = +1

Query: 154 EQIHHLLSCPNNQERPTAEDLLCKFSSEDPIKIRYDVGCHRCQLLPGLPSHALERGQVLS 333
           E  H LL      +  T E  L K      + I    G    + + G P    +   +L 
Sbjct: 251 EMFHMLLDLLEAPDASTLETFLGKIPMVFNVVILSPHGYFAQENVLGYPDTGGQVVYILD 310

Query: 334 ---GLEGDSVDQIRSTQIGIR-----IVRLLAKQIST*NGQRIQRIFGAE 459
               LE + + +I+   + I+     + RLL   + T   QR++++FGAE
Sbjct: 311 QVPALEREMIKRIKEQGLDIKPRILIVTRLLPDAVGTTCNQRLEKVFGAE 360


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,468,368
Number of Sequences: 219361
Number of extensions: 1562419
Number of successful extensions: 3435
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3435
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top