>Y1919_SYNY3 (P73121) Hypothetical protein slr1919|
          Length = 566

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = -3

Query: 564 LAKENVSKMSTNPALKSNSLETVSS-QKLEKKLDLTDTIKDGARLFLIDSGI--RRQLVM 394
           L ++ +  +  N   +   LE + S  + + K DL  T + G +    + G+  RRQ+++
Sbjct: 455 LRRQLIDVLFKNGKFQWQRLENMLSIARSDTKFDLLPTAQLGLQFLFSEEGLYLRRQILL 514

Query: 393 AFTEDSRLHVDELVDVYKLVEDQIDIPSVALEVLQDLPSVARDFMLSWSDSVLSDR 226
           A TED RLH DE+  ++ LV+D         E++    +  R+F L+   ++L  R
Sbjct: 515 ALTEDDRLHTDEVQRIWGLVKDDFK----PQELVNVAWNAVREFSLAGVSTILPQR 566

>EF1B1_CAEEL (P34460) Probable elongation factor 1-beta/1-delta 1|
           (EF-1-beta/delta 1)
          Length = 213

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 13/47 (27%), Positives = 29/47 (61%)
 Frame = -3

Query: 489 QKLEKKLDLTDTIKDGARLFLIDSGIRRQLVMAFTEDSRLHVDELVD 349
           +KL + +++   +  GA+L  I  GI++  ++   ED ++ VD+L++
Sbjct: 146 EKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIE 192

>EF1B2_CAEEL (Q9U2H9) Probable elongation factor 1-beta/1-delta 2|
           (EF-1-beta/delta 2)
          Length = 262

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 13/47 (27%), Positives = 29/47 (61%)
 Frame = -3

Query: 489 QKLEKKLDLTDTIKDGARLFLIDSGIRRQLVMAFTEDSRLHVDELVD 349
           +KL + +++   +  GA+L  I  GI++  ++   ED ++ VD+L++
Sbjct: 195 EKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIE 241

>EF1B_ARTSA (P12262) Elongation factor 1-beta (EF-1-beta)|
          Length = 206

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/62 (24%), Positives = 31/62 (50%)
 Frame = -3

Query: 489 QKLEKKLDLTDTIKDGARLFLIDSGIRRQLVMAFTEDSRLHVDELVDVYKLVEDQIDIPS 310
           +KL + + +   +   A+L  +  GI++  +M   ED ++ +DEL +     ED +    
Sbjct: 140 EKLVRSVQMDGLVWGAAKLIPLAYGIKKLSIMCVVEDDKVSIDELQEKISEFEDFVQSVD 199

Query: 309 VA 304
           +A
Sbjct: 200 IA 201

>AXN_XENLA (Q9YGY0) Axin (Axis inhibition protein) (xAxin)|
          Length = 842

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = -3

Query: 528 PALKSNSLETVSSQKLEKKLDLTDTIKDGARLFLIDSGIRRQLVMAFTEDSRLHVDELVD 349
           P   +N  E  S       + LTD+  DG   + +    RR++  +   + R  +  +  
Sbjct: 314 PVTSANDSEQQSMSSDADTMSLTDSSVDGIPPYRLRKHYRREMQESANANGRGPLPHIPR 373

Query: 348 VYKLVED-QIDIPSVALEVLQDLPSVARD 265
            Y + +D  +D    A E++  L  V RD
Sbjct: 374 TYHMPKDIHVDPEKFAAELISRLEGVLRD 402

>UVRB_HAEDU (Q7VLL3) UvrABC system protein B (Protein uvrB) (Excinuclease ABC|
           subunit B)
          Length = 675

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = -3

Query: 549 VSKMSTNPALKSNSLETVSSQKLEKKLDLTDTIKD-GARLFLIDSGIRRQLVMAFTEDSR 373
           +S++    AL    L T  ++K+ +  DLTD + + G R+  + S I     +    D R
Sbjct: 439 LSEIQQRVALDERVLITTLTKKMAE--DLTDYLDEHGVRVRYLHSDIDTVERVEIIHDLR 496

Query: 372 LHVDELVDVYKLVEDQIDIPSVALEVLQD 286
           + + +++    L+ + +D+P VAL  + D
Sbjct: 497 IGMFDVLVGINLLREGLDMPEVALVAILD 525


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,088,511
Number of Sequences: 219361
Number of extensions: 1688585
Number of successful extensions: 4393
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4393
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)