Clone Information

BLAST Search Result

Clone Name	rbaal5k24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	149	1e-36
2	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	149	2e-36
3	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	149	2e-36
4	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	148	4e-36
5	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	147	5e-36
6	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	116	2e-26
7	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	65	3e-17
8	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	74	5e-17
9	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	74	5e-17
10	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	63	1e-16
11	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	72	2e-16
12	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	68	2e-16
13	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	68	7e-16
14	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	68	7e-16
15	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	80	1e-15
16	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	71	1e-14
17	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	71	1e-14
18	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	70	2e-14
19	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	74	7e-14
20	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	73	2e-13
21	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	71	7e-13
22	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	70	1e-12
23	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	69	2e-12
24	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	69	2e-12
25	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	69	2e-12
26	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	59	2e-12
27	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	69	3e-12
28	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	69	3e-12
29	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	68	6e-12
30	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	54	6e-12
31	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	67	1e-11
32	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	66	2e-11
33	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	65	3e-11
34	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	57	8e-11
35	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	64	9e-11
36	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	64	9e-11
37	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	63	2e-10
38	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	63	2e-10
39	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	53	7e-10
40	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	60	2e-09
41	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	60	2e-09
42	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	60	2e-09
43	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	59	2e-09
44	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	50	5e-09
45	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	56	2e-08
46	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	56	2e-08
47	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	55	5e-08
48	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	52	4e-07
49	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	50	1e-06
50	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	50	2e-06
51	RPOB_AZOSE (Q5P339) DNA-directed RNA polymerase beta chain (EC 2...	32	0.49
52	CH601_CORDI (Q6NJ37) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	30	1.4
53	GLNA_BACFR (P15623) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	2.4
54	PYRE_WOLSU (Q7MAD7) Orotate phosphoribosyltransferase (EC 2.4.2....	29	3.2
55	SYL_CLOTE (Q898V2) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-...	29	3.2
56	ATS3_HUMAN (O15072) ADAMTS-3 precursor (EC 3.4.24.-) (A disinteg...	29	3.2
57	IFT52_HUMAN (Q9Y366) Intraflagellar transport 52 homolog (Protei...	28	4.2
58	WRK24_ARATH (Q9FFS3) Probable WRKY transcription factor 24 (WRKY...	28	5.4
59	PUS1_CANAL (Q59S63) tRNA pseudouridine synthase 1 (EC 5.4.99.-) ...	28	5.4
60	THCR_RHOER (P43462) Probable thc operon regulatory protein	28	7.1
61	RIB7_ARCFU (O28272) Putative 5-amino-6-(5-phosphoribosylamino)ur...	28	7.1
62	DNAJ_YERPS (Q66ES9) Chaperone protein dnaJ	27	9.3
63	DNAJ_YERPE (Q8ZIM6) Chaperone protein dnaJ	27	9.3
64	CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha	27	9.3
65	CR1BE_BACTU (O85805) Pesticidal crystal protein cry1Be (Insectic...	27	9.3
66	CU124_HUMAN (Q96HW9) Protein C21orf124	27	9.3
67	TRAL5_ECOLI (Q00187) Protein traL	27	9.3

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score =  149 bits (377), Expect = 1e-36
 Identities = 75/83 (90%), Positives = 79/83 (95%)
 Frame = -3

Query: 371 SGLYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKI 192
           SGLYSRSYLENQMAVALGGRVAE+VIFG+DNVTTGAS+DFMQVSRVARQMVER GFSKKI
Sbjct: 535 SGLYSRSYLENQMAVALGGRVAEEVIFGEDNVTTGASNDFMQVSRVARQMVERLGFSKKI 594

Query: 191 GQVAIGSSGXNPFLGQQMSSQKD 123
           GQVAIG  G NPFLGQQMS+QKD
Sbjct: 595 GQVAIGGGGGNPFLGQQMSTQKD 617



 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 34/69 (49%), Positives = 46/69 (66%)
 Frame = -1

Query: 211 LGSARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINT 32
           LG +++ G++ +G          +   ++ YSM TAD+VD+EVRELV  AY RA QII T
Sbjct: 588 LGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDSEVRELVEKAYERAKQIITT 647

Query: 31  HIDILHRLA 5
           HIDILH+LA
Sbjct: 648 HIDILHKLA 656

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>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  149 bits (375), Expect = 2e-36
 Identities = 73/83 (87%), Positives = 79/83 (95%)
 Frame = -3

Query: 371 SGLYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKI 192
           SGLYSRSYLENQMAVALGGRVAE+VIFG +NVTTGAS+DFMQVSRVARQM+ERFGFSKKI
Sbjct: 567 SGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKI 626

Query: 191 GQVAIGSSGXNPFLGQQMSSQKD 123
           GQVA+G  G NPF+GQQMSSQKD
Sbjct: 627 GQVAVGGPGGNPFMGQQMSSQKD 649



 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 35/72 (48%), Positives = 49/72 (68%)
 Frame = -1

Query: 220 LKDLGSARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQI 41
           ++  G +++ G++ +G          +  +++ YSM TADIVDAEVRELV  AY RAT+I
Sbjct: 617 IERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEI 676

Query: 40  INTHIDILHRLA 5
           I THIDILH+LA
Sbjct: 677 ITTHIDILHKLA 688

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>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  149 bits (375), Expect = 2e-36
 Identities = 74/83 (89%), Positives = 79/83 (95%)
 Frame = -3

Query: 371 SGLYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKI 192
           SGLYSRSYLENQMAVALGGRVAE+VIFG +NVTTGAS+DFMQVSRVARQMVERFGFSKKI
Sbjct: 555 SGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKI 614

Query: 191 GQVAIGSSGXNPFLGQQMSSQKD 123
           GQVA+G +G NPFLGQ MSSQKD
Sbjct: 615 GQVAVGGAGGNPFLGQSMSSQKD 637



 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 32/68 (47%), Positives = 44/68 (64%)
 Frame = -1

Query: 208 GSARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINTH 29
           G +++ G++ +G             +++ YSM TAD+VDAEVRELV  AY RA +II T 
Sbjct: 609 GFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQ 668

Query: 28  IDILHRLA 5
           IDILH+LA
Sbjct: 669 IDILHKLA 676

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>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  148 bits (373), Expect = 4e-36
 Identities = 77/83 (92%), Positives = 79/83 (95%)
 Frame = -3

Query: 371 SGLYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKI 192
           SGLYSRSYLENQMAVALGGRVAE+V FGQDNVTTGAS+DFMQVSRVARQMVERFGFSKKI
Sbjct: 558 SGLYSRSYLENQMAVALGGRVAEEV-FGQDNVTTGASNDFMQVSRVARQMVERFGFSKKI 616

Query: 191 GQVAIGSSGXNPFLGQQMSSQKD 123
           GQVAIG  G NPFLGQQMSSQKD
Sbjct: 617 GQVAIGGGGGNPFLGQQMSSQKD 639



 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 36/68 (52%), Positives = 47/68 (69%)
 Frame = -1

Query: 208 GSARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINTH 29
           G +++ G++ +G          +  +++ YSM TADIVD EVRELV  AY RATQIINTH
Sbjct: 611 GFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTH 670

Query: 28  IDILHRLA 5
           IDILH+LA
Sbjct: 671 IDILHKLA 678

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>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  147 bits (372), Expect = 5e-36
 Identities = 75/83 (90%), Positives = 78/83 (93%)
 Frame = -3

Query: 371 SGLYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKI 192
           SGLYSRSYLENQMAVALG RVAE+VIFGQDNVTTGAS+DFMQVSRVARQMVER GFSKKI
Sbjct: 558 SGLYSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSRVARQMVERLGFSKKI 617

Query: 191 GQVAIGSSGXNPFLGQQMSSQKD 123
           GQVAIG  G NPFLGQQMS+QKD
Sbjct: 618 GQVAIGGGGGNPFLGQQMSTQKD 640



 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 35/69 (50%), Positives = 47/69 (68%)
 Frame = -1

Query: 211 LGSARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINT 32
           LG +++ G++ +G          +   ++ YSM TAD+VDAEVRELV  AY RAT+II T
Sbjct: 611 LGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVERAYERATEIITT 670

Query: 31  HIDILHRLA 5
           HIDILH+LA
Sbjct: 671 HIDILHKLA 679

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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score =  116 bits (290), Expect = 2e-26
 Identities = 55/86 (63%), Positives = 70/86 (81%)
 Frame = -3

Query: 371 SGLYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKI 192
           SGLYSRSYL+NQMAVALGGR+AE++IFG++ VTTGAS+D  QV+RVARQMV RFG S ++
Sbjct: 466 SGLYSRSYLQNQMAVALGGRIAEEIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRL 525

Query: 191 GQVAIGSSGXNPFLGQQMSSQKDLLD 114
           G VA+G  G   FLG+ ++S +D  D
Sbjct: 526 GPVALGRQGGGVFLGRDIASDRDFSD 551

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>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 64.7 bits (156), Expect(2) = 3e-17
 Identities = 33/77 (42%), Positives = 53/77 (68%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           +R  +E+ +AV + GRVAE++IFG++ VT+GASSD    + +AR MV + G S  IG + 
Sbjct: 461 NREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIF 520

Query: 179 IGSSGXNPFLGQQMSSQ 129
            GSSG + + G+Q +++
Sbjct: 521 HGSSGDDMY-GRQPNNE 536



 Score = 41.2 bits (95), Expect(2) = 3e-17
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -1

Query: 118 SMXTADIVDAEVRELVXTAYSRATQIINTHIDILHRLAN 2
           S  TA+++DAEV+ ++   Y  A  I+  HID LH LAN
Sbjct: 538 SEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLAN 576

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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 73.6 bits (179), Expect(2) = 5e-17
 Identities = 38/82 (46%), Positives = 53/82 (64%)
 Frame = -3

Query: 368 GLYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIG 189
           GL +RS +  Q+  A+GGR AE+++F +   TTGA SD  Q +++AR MV  FG S K+G
Sbjct: 466 GLRTRSEMIAQLVFAMGGRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLG 523

Query: 188 QVAIGSSGXNPFLGQQMSSQKD 123
            V  GS   +PFLG+ M +Q D
Sbjct: 524 AVKYGSEHGDPFLGRTMGTQPD 545



 Score = 31.6 bits (70), Expect(2) = 5e-17
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -1

Query: 121 YSMXTADIVDAEVRELVXTAYSRATQIINTHIDILHRLA 5
           YS   A  +D EVR+L+  A++ A +I+  + D+L  LA
Sbjct: 546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLA 584

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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 73.6 bits (179), Expect(2) = 5e-17
 Identities = 38/82 (46%), Positives = 53/82 (64%)
 Frame = -3

Query: 368 GLYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIG 189
           GL +RS +  Q+  A+GGR AE+++F +   TTGA SD  Q +++AR MV  FG S K+G
Sbjct: 466 GLRTRSEMIAQLVFAMGGRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLG 523

Query: 188 QVAIGSSGXNPFLGQQMSSQKD 123
            V  GS   +PFLG+ M +Q D
Sbjct: 524 AVKYGSEHGDPFLGRTMGTQPD 545



 Score = 31.6 bits (70), Expect(2) = 5e-17
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -1

Query: 121 YSMXTADIVDAEVRELVXTAYSRATQIINTHIDILHRLA 5
           YS   A  +D EVR+L+  A++ A +I+  + D+L  LA
Sbjct: 546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLA 584

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>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 62.8 bits (151), Expect(2) = 1e-16
 Identities = 32/77 (41%), Positives = 52/77 (67%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           +R  +E+ +AV + GRVAE++IFG++ VT+GASSD    + +AR MV + G S  IG + 
Sbjct: 461 NREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIF 520

Query: 179 IGSSGXNPFLGQQMSSQ 129
            GS+  + + G+Q S++
Sbjct: 521 HGSNSDDMY-GRQSSNE 536



 Score = 41.2 bits (95), Expect(2) = 1e-16
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -1

Query: 118 SMXTADIVDAEVRELVXTAYSRATQIINTHIDILHRLAN 2
           S  TA+++DAEV+ ++   Y  A  I+  HID LH LAN
Sbjct: 538 SEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLAN 576

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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 72.0 bits (175), Expect(2) = 2e-16
 Identities = 37/82 (45%), Positives = 53/82 (64%)
 Frame = -3

Query: 368 GLYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIG 189
           GL +RS +  Q+  A+GGR AE+++F +   TTGA SD  + +++AR MV  FG S K+G
Sbjct: 466 GLRTRSEMIAQLVFAMGGRAAEELVFREP--TTGAVSDIEKATKIARSMVTEFGMSSKLG 523

Query: 188 QVAIGSSGXNPFLGQQMSSQKD 123
            V  GS   +PFLG+ M +Q D
Sbjct: 524 AVRYGSEHGDPFLGRTMGTQAD 545



 Score = 31.2 bits (69), Expect(2) = 2e-16
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -1

Query: 121 YSMXTADIVDAEVRELVXTAYSRATQIINTHIDILHRLA 5
           YS   A  +D EVR+L+  A++ A +I+  + D+L  LA
Sbjct: 546 YSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLA 584

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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 67.8 bits (164), Expect(2) = 2e-16
 Identities = 31/82 (37%), Positives = 54/82 (65%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           +++ LE+Q++   GGR+AE++I+G +NV+TGA +D    + +AR MV ++GFSKK+G + 
Sbjct: 458 NKNKLESQISTLYGGRLAEEIIYGVNNVSTGAHNDIKVATNLARNMVTQWGFSKKLGPLL 517

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
                   FLG+ ++  K + D
Sbjct: 518 YSEEEGEIFLGRTVTKSKHMSD 539



 Score = 35.0 bits (79), Expect(2) = 2e-16
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = -1

Query: 109 TADIVDAEVRELVXTAYSRATQIINTHIDILHRL 8
           TA I+D EV+ LV   Y+RA +I+  ++DILH +
Sbjct: 541 TARIIDEEVKLLVEKNYNRAKKILEENLDILHAM 574

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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 68.2 bits (165), Expect(2) = 7e-16
 Identities = 30/82 (36%), Positives = 53/82 (64%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           S+  LE++++    GR+AE +I+G++N++TGAS+D    + +AR MV ++GFS+K+G + 
Sbjct: 457 SQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGPIL 516

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
                   FLG+ M+  K + D
Sbjct: 517 YTEDEGEVFLGRSMAKAKHMSD 538



 Score = 33.1 bits (74), Expect(2) = 7e-16
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -1

Query: 109 TADIVDAEVRELVXTAYSRATQIINTHIDILHRL 8
           TA  +D EVR +V   Y+RA +I+  ++DILH +
Sbjct: 540 TAHSIDEEVRAIVNRNYARAREILIDNMDILHAM 573

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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 68.2 bits (165), Expect(2) = 7e-16
 Identities = 30/82 (36%), Positives = 53/82 (64%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           S+  LE++++    GR+AE +I+G++N++TGAS+D    + +AR MV ++GFS+K+G + 
Sbjct: 203 SQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGPIL 262

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
                   FLG+ M+  K + D
Sbjct: 263 YTEDEGEVFLGRSMAKAKHMSD 284



 Score = 33.1 bits (74), Expect(2) = 7e-16
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -1

Query: 109 TADIVDAEVRELVXTAYSRATQIINTHIDILHRL 8
           TA  +D EVR +V   Y+RA +I+  ++DILH +
Sbjct: 286 TAHSIDEEVRAIVNRNYARAREILIDNMDILHAM 319

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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 43/84 (51%), Positives = 57/84 (67%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L SRS +  ++  ALGGR AE++IFG   VTTGAS+D  QV+ +ARQMV RFG S KIG 
Sbjct: 476 LISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMS-KIGP 534

Query: 185 VAIGSSGXNPFLGQQMSSQKDLLD 114
           +++ S G +PFLG+ M    +  D
Sbjct: 535 LSLESQGSDPFLGRGMGGGSEYSD 558

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>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 70.9 bits (172), Expect(2) = 1e-14
 Identities = 32/65 (49%), Positives = 50/65 (76%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           +R+ L  QM V++GGRVAE++IFG D++TTGASSDF   +++A++MV +FG S+K+G + 
Sbjct: 643 TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMT 702

Query: 179 IGSSG 165
              +G
Sbjct: 703 YSDTG 707



 Score = 26.2 bits (56), Expect(2) = 1e-14
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 118 SMXTADIVDAEVRELVXTAYSRATQIINTH 29
           S  T   ++ E+R L+  +Y RA  I+ TH
Sbjct: 710 SPETQSAIEQEIRILLRDSYERAKHILKTH 739

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>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 70.9 bits (172), Expect(2) = 1e-14
 Identities = 32/65 (49%), Positives = 50/65 (76%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           +R+ L  QM V++GGRVAE++IFG D++TTGASSDF   +++A++MV +FG S+K+G + 
Sbjct: 585 TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMT 644

Query: 179 IGSSG 165
              +G
Sbjct: 645 YSDTG 649



 Score = 26.2 bits (56), Expect(2) = 1e-14
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 118 SMXTADIVDAEVRELVXTAYSRATQIINTH 29
           S  T   ++ E+R L+  +Y RA  I+ TH
Sbjct: 652 SPETQSAIEQEIRILLRESYERAKHILKTH 681

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>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 70.5 bits (171), Expect(2) = 2e-14
 Identities = 32/64 (50%), Positives = 49/64 (76%)
 Frame = -3

Query: 356 RSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAI 177
           R+ L  QM V++GGRVAE++IFG D++TTGASSDF   +++A++MV +FG S+K+G +  
Sbjct: 586 RAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY 645

Query: 176 GSSG 165
             +G
Sbjct: 646 SDTG 649



 Score = 26.2 bits (56), Expect(2) = 2e-14
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 118 SMXTADIVDAEVRELVXTAYSRATQIINTH 29
           S  T   ++ E+R L+  +Y RA  I+ TH
Sbjct: 652 SPETQSAIEQEIRILLRESYERAKHILKTH 681

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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 74.3 bits (181), Expect = 7e-14
 Identities = 40/78 (51%), Positives = 53/78 (67%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L SRS +  ++  ALGGR AE+V+FG   VTTGA +D  QV+ +ARQMV RFG S  IG 
Sbjct: 476 LISRSQILARIMGALGGRAAEEVVFGLPEVTTGAGNDLQQVTSMARQMVTRFGMS-NIGP 534

Query: 185 VAIGSSGXNPFLGQQMSS 132
           +++ S   +PFLG+ M S
Sbjct: 535 LSLESQNSDPFLGRTMGS 552

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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 37/82 (45%), Positives = 55/82 (67%)
 Frame = -3

Query: 368 GLYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIG 189
           GL +++ L  ++A A+GGR AE+ +FG D VTTGA  D  QV+ +ARQMV RFG S  +G
Sbjct: 474 GLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMS-NLG 532

Query: 188 QVAIGSSGXNPFLGQQMSSQKD 123
            +++ SSG   FLG  + ++ +
Sbjct: 533 PISLESSGGEVFLGGGLMNRSE 554

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>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 70.9 bits (172), Expect = 7e-13
 Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L SRS L  ++   LGGR AE+VIFG+  VTTGASSD  QV+ +ARQMV RFG S  IG 
Sbjct: 489 LLSRSALLARIITTLGGRAAEQVIFGEPEVTTGASSDLQQVTNLARQMVTRFGMS-NIGP 547

Query: 185 VAI-GSSGXNPFLGQQMSS 132
           +A+   S    FLG  M+S
Sbjct: 548 LALEDESTGQVFLGGNMAS 566

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>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 50/76 (65%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L S+S L + + VALGGR AE+ +FG   VTTGAS+D  QV+ +ARQMV RFG S  +G 
Sbjct: 457 LLSKSQLMSMIMVALGGRAAEEAVFGNAEVTTGASNDLQQVTNLARQMVTRFGMS-SLGP 515

Query: 185 VAIGSSGXNPFLGQQM 138
           + + +     FLG+ M
Sbjct: 516 LCLETGNEEIFLGRDM 531

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 32/82 (39%), Positives = 54/82 (65%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           SR  LE+Q++   GGR+AE++I+G ++V+TGAS+D    + +AR MV ++GFS+K+G + 
Sbjct: 458 SRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLL 517

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
                   FLG+ ++  K + D
Sbjct: 518 YAEEEGEVFLGRSVAKAKHMSD 539



 Score = 36.2 bits (82), Expect = 0.020
 Identities = 22/65 (33%), Positives = 36/65 (55%)
 Frame = -1

Query: 202 ARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINTHID 23
           A   G++ LG  V         +A+ + S  TA I+D EV+ L+   Y+RA Q++  ++D
Sbjct: 519 AEEEGEVFLGRSVA--------KAKHM-SDETARIIDQEVKALIERNYNRARQLLTDNMD 569

Query: 22  ILHRL 8
           ILH +
Sbjct: 570 ILHAM 574

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 32/82 (39%), Positives = 54/82 (65%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           SR  LE+Q++   GGR+AE++I+G ++V+TGAS+D    + +AR MV ++GFS+K+G + 
Sbjct: 458 SRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLL 517

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
                   FLG+ ++  K + D
Sbjct: 518 YAEEEGEVFLGRSVAKAKHMSD 539



 Score = 36.2 bits (82), Expect = 0.020
 Identities = 22/65 (33%), Positives = 36/65 (55%)
 Frame = -1

Query: 202 ARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINTHID 23
           A   G++ LG  V         +A+ + S  TA I+D EV+ L+   Y+RA Q++  ++D
Sbjct: 519 AEEEGEVFLGRSVA--------KAKHM-SDETARIIDQEVKALIERNYNRARQLLTDNMD 569

Query: 22  ILHRL 8
           ILH +
Sbjct: 570 ILHAM 574

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 32/82 (39%), Positives = 54/82 (65%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           SR  LE+Q++   GGR+AE++I+G ++V+TGAS+D    + +AR MV ++GFS+K+G + 
Sbjct: 458 SRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLL 517

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
                   FLG+ ++  K + D
Sbjct: 518 YAEEEGEVFLGRSVAKAKHMSD 539



 Score = 36.2 bits (82), Expect = 0.020
 Identities = 22/65 (33%), Positives = 36/65 (55%)
 Frame = -1

Query: 202 ARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINTHID 23
           A   G++ LG  V         +A+ + S  TA I+D EV+ L+   Y+RA Q++  ++D
Sbjct: 519 AEEEGEVFLGRSVA--------KAKHM-SDETARIIDQEVKALIERNYNRARQLLTDNMD 569

Query: 22  ILHRL 8
           ILH +
Sbjct: 570 ILHAM 574

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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 58.5 bits (140), Expect(2) = 2e-12
 Identities = 29/62 (46%), Positives = 44/62 (70%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           LY+R  L ++M + LGGRVAE++ FGQ  +TTGA  D  +V++ A   + +FG S+K+GQ
Sbjct: 481 LYTREQLFDRMCMMLGGRVAEQLFFGQ--ITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQ 538

Query: 185 VA 180
           V+
Sbjct: 539 VS 540



 Score = 30.8 bits (68), Expect(2) = 2e-12
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -1

Query: 121 YSMXTADIVDAEVRELVXTAYSRATQII 38
           YS  TA ++D EVR LV +AY+R  +++
Sbjct: 555 YSEATAQLIDEEVRCLVRSAYNRTLELL 582

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 32/82 (39%), Positives = 54/82 (65%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           SR  LE+Q++   GGR+AE++I+G ++V+TGAS+D    + +AR MV ++GFS+K+G + 
Sbjct: 458 SRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLL 517

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
                   FLG+ ++  K + D
Sbjct: 518 YAEEEGEVFLGRSVAKAKHMSD 539



 Score = 37.0 bits (84), Expect = 0.012
 Identities = 23/65 (35%), Positives = 36/65 (55%)
 Frame = -1

Query: 202 ARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINTHID 23
           A   G++ LG  V         +A+ + S  TA I+D EV+ L+   Y+RA QI+  ++D
Sbjct: 519 AEEEGEVFLGRSVA--------KAKHM-SDETARIIDQEVKALIERNYNRARQILTDNMD 569

Query: 22  ILHRL 8
           ILH +
Sbjct: 570 ILHAM 574

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 32/82 (39%), Positives = 54/82 (65%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           SR  LE+Q++   GGR+AE++I+G ++V+TGAS+D    + +AR MV ++GFS+K+G + 
Sbjct: 458 SRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLL 517

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
                   FLG+ ++  K + D
Sbjct: 518 YAEEEGEVFLGRSVAKAKHMSD 539



 Score = 37.0 bits (84), Expect = 0.012
 Identities = 23/65 (35%), Positives = 36/65 (55%)
 Frame = -1

Query: 202 ARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINTHID 23
           A   G++ LG  V         +A+ + S  TA I+D EV+ L+   Y+RA QI+  ++D
Sbjct: 519 AEEEGEVFLGRSVA--------KAKHM-SDETARIIDQEVKALIERNYNRARQILTDNMD 569

Query: 22  ILHRL 8
           ILH +
Sbjct: 570 ILHAM 574

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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 32/82 (39%), Positives = 51/82 (62%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           SR  LE+Q++   GGR+AE++I+G  NV+TGA +D    + +AR MV ++GFS K+G + 
Sbjct: 458 SRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLL 517

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
                   FLG+ ++  K + D
Sbjct: 518 YAEEEGEVFLGRSVAKAKHMSD 539



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 23/65 (35%), Positives = 37/65 (56%)
 Frame = -1

Query: 202 ARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINTHID 23
           A   G++ LG  V         +A+ + S  TA I+D EV+ L+   Y+RA +I+N ++D
Sbjct: 519 AEEEGEVFLGRSVA--------KAKHM-SDETARIIDEEVKLLIEVNYNRARKILNENLD 569

Query: 22  ILHRL 8
           ILH +
Sbjct: 570 ILHAM 574

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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 53.9 bits (128), Expect(2) = 6e-12
 Identities = 27/75 (36%), Positives = 45/75 (60%)
 Frame = -3

Query: 350 YLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGS 171
           +L++Q+A  +GGR+ E+++FG    T GAS+D  + + +AR MV  +G SKK+G V+   
Sbjct: 503 HLQDQLASLMGGRLGEEIVFGV--ATPGASNDIEKATHIARSMVTEYGMSKKLGMVSY-E 559

Query: 170 SGXNPFLGQQMSSQK 126
                F+G+     K
Sbjct: 560 GDHQVFIGRDYGQTK 574



 Score = 33.9 bits (76), Expect(2) = 6e-12
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 127 RIYSMXTADIVDAEVRELVXTAYSRATQIINTH 29
           + YS  TA ++D EVR ++  AY RA + I TH
Sbjct: 574 KTYSEATAVMIDDEVRRILGEAYDRAKEAIETH 606

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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           +Y +  L N++ V LGGR AE+V FG+D +TTGA +D  + + +A +MV  +G S K+G 
Sbjct: 460 IYDKKDLYNKILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGP 519

Query: 185 VAIGSSGXNPFLG 147
           +AI     NPFLG
Sbjct: 520 IAI-RRVANPFLG 531

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>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 33/83 (39%), Positives = 53/83 (63%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L + S L +Q+A  LGGR AE+++F  D++TTGA++D  + + +A QMV  +G SK +G 
Sbjct: 481 LLNESELRDQIATLLGGRAAEEIVF--DSITTGAANDLQRATDLAEQMVTTYGMSKVLGP 538

Query: 185 VAIGSSGXNPFLGQQMSSQKDLL 117
           +A      N FLGQ M + + ++
Sbjct: 539 LAYDKGQQNNFLGQGMGNPRRMV 561

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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 31/82 (37%), Positives = 52/82 (63%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           SR  LE+Q++   GGR+AE++I+G  NV+TGA +D    + +A+ MV ++GFS+K+G + 
Sbjct: 458 SRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLL 517

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
                   FLG+ ++  K + D
Sbjct: 518 YAEEEGEIFLGRSVAKAKHMSD 539



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 25/65 (38%), Positives = 36/65 (55%)
 Frame = -1

Query: 202 ARRSGKLXLGHLVXTLSWASRCRARRIYSMXTADIVDAEVRELVXTAYSRATQIINTHID 23
           A   G++ LG  V         +A+ + S  TA I+D EV+ L+   YSRA  I+N +ID
Sbjct: 519 AEEEGEIFLGRSVA--------KAKHM-SDETARIIDEEVKLLIEINYSRARNILNENID 569

Query: 22  ILHRL 8
           ILH +
Sbjct: 570 ILHAM 574

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>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 56.6 bits (135), Expect(2) = 8e-11
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -3

Query: 329 VALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIG 189
           V +GGRVAE++IFG D VTTGA+ D  + +++A QMV+ FG S K+G
Sbjct: 516 VMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVFGMSDKVG 562



 Score = 27.3 bits (59), Expect(2) = 8e-11
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 109 TADIVDAEVRELVXTAYSRATQIINT 32
           TA+++DAE+  ++  +Y RA  I+ T
Sbjct: 585 TAELIDAEINRVLQESYKRAKVILET 610

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>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 31/82 (37%), Positives = 53/82 (64%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L S+S + +++  AL GR  E+++FG   VT GA++D  QV+ +ARQMV +FG S K+G 
Sbjct: 474 LVSKSQILSKIIAALAGRAMEEIVFGLPEVTIGAANDIKQVTFMARQMVTKFGMS-KVGP 532

Query: 185 VAIGSSGXNPFLGQQMSSQKDL 120
           + + +S    F+G+ +  + +L
Sbjct: 533 ICLENSSSEVFIGRDLMGRHEL 554

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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
 Frame = -3

Query: 323 LGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIG-SSGXNPFLG 147
           LGGRVAE++IFG+  V+TGA +DF + + +AR+MV  FG S+K+G +  G S G   FLG
Sbjct: 479 LGGRVAEEIIFGE--VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLG 536

Query: 146 QQMSSQKDLLD 114
           +  +++++  D
Sbjct: 537 RDFNNEQNYSD 547

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>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 34/82 (41%), Positives = 51/82 (62%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           +R+ L  Q+ V +GGRV E+++FG D VT GA+ DF + + +A+ MV+RFGFS KIG   
Sbjct: 469 TRAQLLAQLDVLMGGRVGEELVFGADKVTNGAADDFRKATILAQNMVKRFGFSSKIGPRV 528

Query: 179 IGSSGXNPFLGQQMSSQKDLLD 114
           I  +       Q   + +DL+D
Sbjct: 529 IPDTQDE----QLGEATRDLID 546

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>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 34/73 (46%), Positives = 48/73 (65%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L +R+ +  ++A  LGGRVAE+VIFG D VTTGA +D  +++ +ARQMV + G S  +G 
Sbjct: 514 LMTRNQMIARIAGLLGGRVAEEVIFGDDEVTTGAGNDIEKITYLARQMVTKLGMS-SLGL 572

Query: 185 VAIGSSGXNPFLG 147
           VA+   G   F G
Sbjct: 573 VALEEEGDRNFSG 585

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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 53.1 bits (126), Expect(2) = 7e-10
 Identities = 23/62 (37%), Positives = 43/62 (69%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           LY++  L ++M + LGGR +E++ FG+  +TTGA  D  +V++ A   + +FG ++K+GQ
Sbjct: 615 LYTKEQLLDRMCMTLGGRASEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQ 672

Query: 185 VA 180
           ++
Sbjct: 673 IS 674



 Score = 27.7 bits (60), Expect(2) = 7e-10
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 121 YSMXTADIVDAEVRELVXTAYSRATQII 38
           YS  TA ++D EVR L+  AY R   ++
Sbjct: 689 YSEATARLIDDEVRILINDAYKRTVALL 716

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>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 36/82 (43%), Positives = 52/82 (63%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L S+  ++ Q+A  +GGRVAE++IF     TTGAS+DF Q +++AR MV  +G S+K+G 
Sbjct: 491 LLSKEDMKEQLAGLMGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMSEKLGP 548

Query: 185 VAIGSSGXNPFLGQQMSSQKDL 120
           V     G +  LG Q S QK +
Sbjct: 549 VQY--EGNHAMLGAQ-SPQKSI 567

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>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 36/82 (43%), Positives = 52/82 (63%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L S+  ++ Q+A  +GGRVAE++IF     TTGAS+DF Q +++AR MV  +G S+K+G 
Sbjct: 491 LLSKEDMKEQLAGLMGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMSEKLGP 548

Query: 185 VAIGSSGXNPFLGQQMSSQKDL 120
           V     G +  LG Q S QK +
Sbjct: 549 VQY--EGNHAMLGAQ-SPQKSI 567

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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = -3

Query: 323 LGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA-IGSSGXNPFLG 147
           LGGRVAE+V FG+  V+TGA +DF + + +AR+MV  +G S+K+G +  I  SG   FLG
Sbjct: 484 LGGRVAEEVTFGE--VSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLG 541

Query: 146 QQMSSQKDLLD 114
           + + ++++  D
Sbjct: 542 RDIQNEQNYSD 552

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>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 29/75 (38%), Positives = 47/75 (62%)
 Frame = -3

Query: 359 SRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA 180
           S+  L   +A  +GGR AE +I+G++N++TGAS D  + +++AR+MV  +G S  +G + 
Sbjct: 518 SKKELLATIASYMGGRAAEMIIYGKENISTGASDDISRATKIARKMVTEWGMS-ALGPIK 576

Query: 179 IGSSGXNPFLGQQMS 135
                 NPFLG+  S
Sbjct: 577 YEEDTENPFLGRDYS 591

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>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 49.7 bits (117), Expect(2) = 5e-09
 Identities = 27/61 (44%), Positives = 41/61 (67%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L +   L+++M ++LGGRV+E++ F   +VT+GAS DF +V+ +A  MV   G S KIG 
Sbjct: 655 LLTEQQLKDRMTMSLGGRVSEELHF--PSVTSGASDDFKKVTSMATAMVTELGMSDKIGW 712

Query: 185 V 183
           V
Sbjct: 713 V 713



 Score = 28.1 bits (61), Expect(2) = 5e-09
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -1

Query: 121 YSMXTADIVDAEVRELVXTAYSRATQIINTHIDILHRLA 5
           +S  T DI+D+EV  +V   + R T+++    + + ++A
Sbjct: 727 FSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIA 765

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>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L  +S L   +A A+GGR AE+ I+G   +TTGASSDF + + +AR MV + G S K+GQ
Sbjct: 536 LKRKSDLLAMIATAMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMVTQLGMS-KLGQ 594

Query: 185 VA-IGSSGXNP 156
           V  + S G  P
Sbjct: 595 VQYVPSQGTLP 605

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>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L  +S L   +A A+GGR AE+ I+G   +TTGASSDF + + +AR MV + G S K+GQ
Sbjct: 533 LKRKSDLLAMIATAMGGRAAEEEIYGPLEITTGASSDFYKATNIARAMVTQLGMS-KLGQ 591

Query: 185 VA-IGSSGXNP 156
           V  + S G  P
Sbjct: 592 VQYVPSQGTVP 602

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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 24/62 (38%), Positives = 44/62 (70%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           LY++  L ++M + LGGRV+E++ FG+  +TTGA  D  +V++ A   + +FG ++K+GQ
Sbjct: 614 LYTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQ 671

Query: 185 VA 180
           ++
Sbjct: 672 IS 673

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>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 21/57 (36%), Positives = 37/57 (64%)
 Frame = -3

Query: 338 QMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSS 168
           ++ V +GG++AE++I+G+DN T+G  SD    +  AR MV ++G S  +G V +  +
Sbjct: 591 RLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVNLSEN 647

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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L+++  L  +M +ALGGR +E + F +  VT+GA  D  +V+R+A  MV++FG +  IG 
Sbjct: 616 LFTKEQLFERMCMALGGRASEALSFNE--VTSGAQDDLRKVTRIAYSMVKQFGMAPGIGP 673

Query: 185 VAIGSS-------GXNPF---LGQQMSSQKDLL 117
           ++   +       G  PF   L Q M  +  LL
Sbjct: 674 ISFPEAQEGLMGIGRRPFSQGLQQMMDHEARLL 706

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>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 27/69 (39%), Positives = 42/69 (60%)
 Frame = -3

Query: 365 LYSRSYLENQMAVALGGRVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQ 186
           L S     ++M +ALGGRV+E++ F   +VT+GA  DF +V+++A  MV   G S KIG 
Sbjct: 600 LISEEQFRHRMIMALGGRVSEELHF--PSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGY 657

Query: 185 VAIGSSGXN 159
           ++   +  N
Sbjct: 658 LSFDQNDGN 666

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>RPOB_AZOSE (Q5P339) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1377

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -1

Query: 187  KLXLGHLVXT-LSWASRCRARRIYSMXTADIVDAEVRELVXTAYS 56
            ++ +G ++ T L WAS+    +I +M  A+   AEVREL+   Y+
Sbjct: 1144 RMNIGQILETHLGWASKALGNKIGTMLRANAAAAEVRELLEHIYN 1188

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>CH601_CORDI (Q6NJ37) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 539

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -3

Query: 287 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGXNP 156
           Q+ V  G  S  +Q+S+  R+  + F    KIG +A+ ++   P
Sbjct: 406 QEGVIAGGGSALVQISKELREFAQEFEGDAKIGVIALANALAKP 449

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>GLNA_BACFR (P15623) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 729

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
 Frame = -1

Query: 253 SCRSHVSPDKW-LKDLGSARRSGKLXLGHLV-XTLSWASR-----CRARRIYSMXTADIV 95
           +CR  V  +K+ +K    +R  G L + H+V   +S+ +R     CR + I+S    +++
Sbjct: 586 ACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKEIFSEEEYEVM 645

Query: 94  DAEVRELVXTAYSRATQI 41
            A+ +EL+     R + I
Sbjct: 646 SADRKELIKEISHRVSAI 663

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>PYRE_WOLSU (Q7MAD7) Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRT)|
           (OPRTase)
          Length = 205

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
 Frame = -3

Query: 347 LENQMAVALGGRVA--EKVIFGQDNVTTGASS--DFMQVSRVARQMV-----ERFGFSKK 195
           +E +M +  G  VA  EK++  +D +TTG S+    M+V R+  Q+V        GF ++
Sbjct: 94  VEGKMTLRRGFEVASGEKILICEDIITTGGSAVESAMEVERLGAQVVGYAALANRGFCQR 153

Query: 194 IG 189
           +G
Sbjct: 154 VG 155

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>SYL_CLOTE (Q898V2) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 812

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 264 CPSCHVVLAKDHLLGNPATKCHSHLV 341
           CPSC+ VLA + +L     +C S ++
Sbjct: 158 CPSCNTVLANEQVLDGACERCSSDVI 183

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>ATS3_HUMAN (O15072) ADAMTS-3 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 3) (ADAM-TS
            3) (ADAM-TS3) (Procollagen II amino propeptide-processing
            enzyme) (Procollagen II N-proteinase) (PC II-NP)
          Length = 1205

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 281  CLGQRSPSRQPCHQVPQP 334
            C+G R  SR+PC++VP P
Sbjct: 950  CMGDRPESRRPCNRVPCP 967

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>IFT52_HUMAN (Q9Y366) Intraflagellar transport 52 homolog (Protein NGD5 homolog)|
          Length = 437

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 279 RDNWGIQRLHAGLTCRQTNG*KIWV 205
           R NW IQ L   +T  + NG K+W+
Sbjct: 33  RSNWKIQSLKDEITSEKLNGVKLWI 57

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>WRK24_ARATH (Q9FFS3) Probable WRKY transcription factor 24 (WRKY DNA-binding|
           protein 24)
          Length = 179

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +1

Query: 202 LNPNLSTICLATRETCMKSLDAPVVTLSWPKITFSATLPPSATAIWFSR*LLLYSP 369
           +NP LS + +    T    +D  ++ +  P  TFS  + PS+++ W+     +++P
Sbjct: 6   INPMLSRLDVENNNTFSSFVDKTLMMM--PPSTFSGEVEPSSSSSWYPESFHVHAP 59

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>PUS1_CANAL (Q59S63) tRNA pseudouridine synthase 1 (EC 5.4.99.-) (tRNA-uridine|
           isomerase 1) (tRNA pseudouridylate synthase 1)
          Length = 450

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 297 DLWPRQRDNWGIQRLHAGLTCRQ 229
           DL P+Q   WGIQR   G  CR+
Sbjct: 75  DLLPKQIRIWGIQRATKGFDCRK 97

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>THCR_RHOER (P43462) Probable thc operon regulatory protein|
          Length = 332

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 356 RSYLENQMAVALGGRVAEKVIFGQD 282
           R  LE+Q+A  LG  + + ++FG D
Sbjct: 133 RRALEDQLAARLGSEIVDPIVFGMD 157

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>RIB7_ARCFU (O28272) Putative 5-amino-6-(5-phosphoribosylamino)uracil reductase|
           (EC 1.1.1.193) (HTP reductase)
          Length = 219

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 314 RVAEKVIFGQDNVTTGASSDFMQVSRVARQMVERFG 207
           +VAE  +FG++ V   A  +F+    V R MVE  G
Sbjct: 122 KVAEVAVFGEERVELSALLEFLHRKGVRRLMVEGGG 157

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>DNAJ_YERPS (Q66ES9) Chaperone protein dnaJ|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 264 CPSCHVVLAKDHLLGNPATKCHSH 335
           CP CH    +  ++ +P  KCH H
Sbjct: 186 CPHCH---GRGQIIKDPCNKCHGH 206

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>DNAJ_YERPE (Q8ZIM6) Chaperone protein dnaJ|
          Length = 379

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 264 CPSCHVVLAKDHLLGNPATKCHSH 335
           CP CH    +  ++ +P  KCH H
Sbjct: 186 CPHCH---GRGQIIKDPCNKCHGH 206

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>CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha|
          Length = 909

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -1

Query: 109 TADIVDAEVRELVXTAYSRATQIINTHIDILHR 11
           +AD+V   + E V  + +R T++ N  IDILH+
Sbjct: 208 SADVVHYPLPENVRGSRARLTELDNVEIDILHQ 240

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>CR1BE_BACTU (O85805) Pesticidal crystal protein cry1Be (Insecticidal|
           delta-endotoxin CryIB(e)) (Crystaline entomocidal
           protoxin) (139 kDa crystal protein)
          Length = 1227

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 300 GDLWPRQRDNWGIQRLHAGLTCRQ 229
           G+LWPR RD W I   H     RQ
Sbjct: 87  GELWPRGRDPWEIFLEHVEQLIRQ 110

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>CU124_HUMAN (Q96HW9) Protein C21orf124|
          Length = 162

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = -1

Query: 334 WLW---HLVAGLPRR*SLAKTT*QLGHPATSCRSHVSPDKWLKDLGSARRSGKLXLGHLV 164
           W W   HLVA +P            G       S +S    L+ LG + RS +   G + 
Sbjct: 82  WAWQSLHLVASIPS-----------GPFERISWSSLSELPGLRALGRSLRSWRSAGGRVA 130

Query: 163 XTLSWASRCRAR 128
             LSW S CRAR
Sbjct: 131 --LSWLSECRAR 140

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>TRAL5_ECOLI (Q00187) Protein traL|
          Length = 241

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 189 ASCXWVIWXKPFLGPADVEPEG 124
           A C +V+W  P+ GP + E +G
Sbjct: 144 AECLFVVWLNPYWGPIEHEGKG 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,855,565
Number of Sequences: 219361
Number of extensions: 989563
Number of successful extensions: 2731
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 2652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2718
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result