Clone Information

BLAST Search Result

Clone Name	rbaal5k23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	236	3e-62
2	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	233	3e-61
3	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	231	6e-61
4	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	229	2e-60
5	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	193	2e-49
6	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	143	2e-34
7	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	120	3e-27
8	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	117	2e-26
9	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	113	2e-25
10	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	113	3e-25
11	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	113	3e-25
12	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	107	1e-23
13	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	105	9e-23
14	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	103	3e-22
15	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	103	3e-22
16	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	102	4e-22
17	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	102	4e-22
18	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	102	6e-22
19	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	102	6e-22
20	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	102	6e-22
21	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	102	6e-22
22	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	102	7e-22
23	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	101	1e-21
24	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	101	1e-21
25	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	101	1e-21
26	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	100	2e-21
27	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	100	2e-21
28	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	100	2e-21
29	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	97	2e-20
30	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	95	9e-20
31	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	94	2e-19
32	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	90	4e-18
33	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	86	4e-17
34	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	85	1e-16
35	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	85	1e-16
36	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	85	1e-16
37	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	84	3e-16
38	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	84	3e-16
39	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	80	3e-15
40	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	79	9e-15
41	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	78	1e-14
42	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	77	2e-14
43	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	76	6e-14
44	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	76	6e-14
45	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	74	2e-13
46	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	74	2e-13
47	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	74	2e-13
48	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	73	5e-13
49	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	72	8e-13
50	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	71	2e-12
51	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	67	2e-11
52	CK016_MOUSE (Q9JJR6) Protein C11orf16 homolog	30	2.7
53	YEA8_SCHPO (O14073) Putative dipeptidyl aminopeptidase C2E11.08 ...	29	6.0
54	AROA_LISIN (Q92A85) 3-phosphoshikimate 1-carboxyvinyltransferase...	29	7.8
55	ARGJ_METAC (Q8TK55) Arginine biosynthesis bifunctional protein a...	29	7.8
56	CH601_CORDI (Q6NJ37) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	29	7.8

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  236 bits (601), Expect = 3e-62
 Identities = 118/136 (86%), Positives = 127/136 (93%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           VALGGRV EEVIFG  NVTTGAS+DFMQVSRVARQM+ERFGFSKKIGQVA+G  GGNPF+
Sbjct: 581 VALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFM 640

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
           GQQMSSQKDYSMATADIVDAEVRELVE AY RAT+II THIDILH+LA LLIEKETVDGE
Sbjct: 641 GQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGE 700

Query: 110 EFMSLFIDGQAELFVA 63
           EFMSLFIDGQAEL+++
Sbjct: 701 EFMSLFIDGQAELYIS 716

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>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  233 bits (593), Expect = 3e-61
 Identities = 121/136 (88%), Positives = 127/136 (93%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           VALGGRV EEV FGQ NVTTGAS+DFMQVSRVARQMVERFGFSKKIGQVAIG  GGNPFL
Sbjct: 572 VALGGRVAEEV-FGQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGGGGNPFL 630

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
           GQQMSSQKDYSMATADIVD EVRELV+ AY RATQIINTHIDILH+LA LLIEKETVDGE
Sbjct: 631 GQQMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGE 690

Query: 110 EFMSLFIDGQAELFVA 63
           EFMSLFIDG+AEL+V+
Sbjct: 691 EFMSLFIDGKAELYVS 706

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>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  231 bits (590), Expect = 6e-61
 Identities = 118/139 (84%), Positives = 128/139 (92%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           VALG RV EEVIFGQ NVTTGAS+DFMQVSRVARQMVER GFSKKIGQVAIG  GGNPFL
Sbjct: 572 VALGERVAEEVIFGQDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFL 631

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
           GQQMS+QKDYSMATAD+VDAEVRELVE AY RAT+II THIDILH+LA LLIEKETVDGE
Sbjct: 632 GQQMSTQKDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGE 691

Query: 110 EFMSLFIDGQAELFVA*VA 54
           EFMSLFIDG+AEL+++ V+
Sbjct: 692 EFMSLFIDGKAELYISWVS 710

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>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  229 bits (585), Expect = 2e-60
 Identities = 117/136 (86%), Positives = 125/136 (91%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           VALGGRV EEVIFG  NVTTGAS+DFMQVSRVARQMVERFGFSKKIGQVA+G +GGNPFL
Sbjct: 569 VALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFL 628

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
           GQ MSSQKDYSMATAD+VDAEVRELVE AY RA +II T IDILH+LA LLIEKETVDGE
Sbjct: 629 GQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGE 688

Query: 110 EFMSLFIDGQAELFVA 63
           EFMSLFIDGQAEL+V+
Sbjct: 689 EFMSLFIDGQAELYVS 704

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>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score =  193 bits (490), Expect = 2e-49
 Identities = 98/114 (85%), Positives = 104/114 (91%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           VALGGRV EEVIFG+ NVTTGAS+DFMQVSRVARQMVER GFSKKIGQVAIG  GGNPFL
Sbjct: 549 VALGGRVAEEVIFGEDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFL 608

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEK 129
           GQQMS+QKDYSMATAD+VD+EVRELVE AY RA QII THIDILH+LA LLIEK
Sbjct: 609 GQQMSTQKDYSMATADVVDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662

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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score =  143 bits (361), Expect = 2e-34
 Identities = 71/138 (51%), Positives = 98/138 (71%)
 Frame = -3

Query: 485 RTKWTVALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSG 306
           + +  VALGGR+ EE+IFG+  VTTGAS+D  QV+RVARQMV RFG S ++G VA+G  G
Sbjct: 475 QNQMAVALGGRIAEEIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQG 534

Query: 305 GNPFLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKE 126
           G  FLG+ ++S +D+S  TA  +D EV +LV+ AY RA Q++  +  IL +LA +L+EKE
Sbjct: 535 GGVFLGRDIASDRDFSDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKE 594

Query: 125 TVDGEEFMSLFIDGQAEL 72
           TVD EE  +L  +  A+L
Sbjct: 595 TVDSEELQTLLANNNAKL 612

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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score =  120 bits (300), Expect = 3e-27
 Identities = 61/121 (50%), Positives = 82/121 (67%)
 Frame = -3

Query: 467 ALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLG 288
           ALGGR  EE+IFG   VTTGAS+D  QV+ +ARQMV RFG SK IG +++ S G +PFLG
Sbjct: 489 ALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSK-IGPLSLESQGSDPFLG 547

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 108
           + M    +YS   A  +D +VRE+V   Y  A +I+  +  ++ RL +LLIEKET++G E
Sbjct: 548 RGMGGGSEYSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNE 607

Query: 107 F 105
           F
Sbjct: 608 F 608

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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score =  117 bits (292), Expect = 2e-26
 Identities = 58/124 (46%), Positives = 82/124 (66%)
 Frame = -3

Query: 467 ALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLG 288
           A+GGR  EE +FG   VTTGA  D  QV+ +ARQMV RFG S  +G +++ SSGG  FLG
Sbjct: 488 AMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMSN-LGPISLESSGGEVFLG 546

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 108
             + ++ +YS   A  +DA+VR+L E  +  A +I+    +++ RL +LLIEKET+DGEE
Sbjct: 547 GGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEE 606

Query: 107 FMSL 96
           F  +
Sbjct: 607 FRQI 610

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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score =  113 bits (283), Expect = 2e-25
 Identities = 58/127 (45%), Positives = 82/127 (64%)
 Frame = -3

Query: 467 ALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLG 288
           ALGGR  EEV+FG   VTTGA +D  QV+ +ARQMV RFG S  IG +++ S   +PFLG
Sbjct: 489 ALGGRAAEEVVFGLPEVTTGAGNDLQQVTSMARQMVTRFGMSN-IGPLSLESQNSDPFLG 547

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 108
           + M S   YS   A  +D +VR +++  ++   QII  +  ++ +L +LLIEKET+DG+E
Sbjct: 548 RTMGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDE 607

Query: 107 FMSLFID 87
           F  +  D
Sbjct: 608 FRQIVGD 614

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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  113 bits (282), Expect = 3e-25
 Identities = 59/127 (46%), Positives = 82/127 (64%)
 Frame = -3

Query: 467 ALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLG 288
           A+GGR  EE++F +   TTGA SD  Q +++AR MV  FG S K+G V  GS  G+PFLG
Sbjct: 480 AMGGRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLG 537

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 108
           + M +Q DYS   A  +D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+   E
Sbjct: 538 RTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPE 597

Query: 107 FMSLFID 87
             S+F D
Sbjct: 598 LESIFAD 604

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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  113 bits (282), Expect = 3e-25
 Identities = 59/127 (46%), Positives = 82/127 (64%)
 Frame = -3

Query: 467 ALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLG 288
           A+GGR  EE++F +   TTGA SD  Q +++AR MV  FG S K+G V  GS  G+PFLG
Sbjct: 480 AMGGRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLG 537

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 108
           + M +Q DYS   A  +D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+   E
Sbjct: 538 RTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPE 597

Query: 107 FMSLFID 87
             S+F D
Sbjct: 598 LESIFAD 604

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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score =  107 bits (268), Expect = 1e-23
 Identities = 56/125 (44%), Positives = 80/125 (64%)
 Frame = -3

Query: 467 ALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLG 288
           A+GGR  EE++F +   TTGA SD  + +++AR MV  FG S K+G V  GS  G+PFLG
Sbjct: 480 AMGGRAAEELVFREP--TTGAVSDIEKATKIARSMVTEFGMSSKLGAVRYGSEHGDPFLG 537

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 108
           + M +Q DYS   A  +D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+   E
Sbjct: 538 RTMGTQADYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPE 597

Query: 107 FMSLF 93
              +F
Sbjct: 598 LEGIF 602

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>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score =  105 bits (261), Expect = 9e-23
 Identities = 57/124 (45%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
 Frame = -3

Query: 464 LGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAI-GSSGGNPFLG 288
           LGGR  E+VIFG+  VTTGASSD  QV+ +ARQMV RFG S  IG +A+   S G  FLG
Sbjct: 503 LGGRAAEQVIFGEPEVTTGASSDLQQVTNLARQMVTRFGMS-NIGPLALEDESTGQVFLG 561

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 108
             M+S  +Y+   AD +D EVR+++   Y +A +I+  +  ++  +   L++KET+DG+E
Sbjct: 562 GNMASGSEYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDE 621

Query: 107 FMSL 96
           F  L
Sbjct: 622 FREL 625

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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score =  103 bits (257), Expect = 3e-22
 Identities = 50/115 (43%), Positives = 76/115 (66%)
 Frame = -3

Query: 461 GGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQ 282
           GGR+ EE+I+G  NV+TGA +D    + +AR MV ++GFS K+G +      G  FLG+ 
Sbjct: 471 GGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRS 530

Query: 281 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 117
           ++  K  S  TA I+D EV+ L+E  Y+RA +I+N ++DILH + + LI+ ET+D
Sbjct: 531 VAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYETID 585

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>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  103 bits (256), Expect = 3e-22
 Identities = 58/131 (44%), Positives = 85/131 (64%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           V + GRV EE+IFG+  VT+GASSD    + +AR MV + G S  IG +  GSSG + + 
Sbjct: 471 VYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIFHGSSGDDMY- 529

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
           G+Q +++   S ATA+++DAEV+ ++   Y  A  I+  HID LH LAN LIE ET+ G+
Sbjct: 530 GRQPNNET--SEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQ 587

Query: 110 EFMSLFIDGQA 78
           +  +L + G+A
Sbjct: 588 QIKNL-LSGRA 597

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  102 bits (255), Expect = 4e-22
 Identities = 50/122 (40%), Positives = 79/122 (64%)
 Frame = -3

Query: 461 GGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQ 282
           GGR+ EE+I+G  +V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ 
Sbjct: 471 GGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRS 530

Query: 281 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 102
           ++  K  S  TA I+D EV+ L+E  Y+RA QI+  ++DILH + + L++ ET+D  +  
Sbjct: 531 VAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQID 590

Query: 101 SL 96
            L
Sbjct: 591 DL 592

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  102 bits (255), Expect = 4e-22
 Identities = 50/122 (40%), Positives = 79/122 (64%)
 Frame = -3

Query: 461 GGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQ 282
           GGR+ EE+I+G  +V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ 
Sbjct: 471 GGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRS 530

Query: 281 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 102
           ++  K  S  TA I+D EV+ L+E  Y+RA QI+  ++DILH + + L++ ET+D  +  
Sbjct: 531 VAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQID 590

Query: 101 SL 96
            L
Sbjct: 591 DL 592

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  102 bits (254), Expect = 6e-22
 Identities = 49/122 (40%), Positives = 79/122 (64%)
 Frame = -3

Query: 461 GGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQ 282
           GGR+ EE+I+G  +V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ 
Sbjct: 471 GGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRS 530

Query: 281 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 102
           ++  K  S  TA I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D  +  
Sbjct: 531 VAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQID 590

Query: 101 SL 96
            L
Sbjct: 591 DL 592

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  102 bits (254), Expect = 6e-22
 Identities = 49/122 (40%), Positives = 79/122 (64%)
 Frame = -3

Query: 461 GGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQ 282
           GGR+ EE+I+G  +V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ 
Sbjct: 471 GGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRS 530

Query: 281 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 102
           ++  K  S  TA I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D  +  
Sbjct: 531 VAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQID 590

Query: 101 SL 96
            L
Sbjct: 591 DL 592

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  102 bits (254), Expect = 6e-22
 Identities = 49/122 (40%), Positives = 79/122 (64%)
 Frame = -3

Query: 461 GGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQ 282
           GGR+ EE+I+G  +V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ 
Sbjct: 471 GGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRS 530

Query: 281 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 102
           ++  K  S  TA I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D  +  
Sbjct: 531 VAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQID 590

Query: 101 SL 96
            L
Sbjct: 591 DL 592

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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score =  102 bits (254), Expect = 6e-22
 Identities = 51/115 (44%), Positives = 75/115 (65%)
 Frame = -3

Query: 461 GGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQ 282
           GGR+ EE+I+G  NV+TGA +D    + +A+ MV ++GFS+K+G +      G  FLG+ 
Sbjct: 471 GGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLLYAEEEGEIFLGRS 530

Query: 281 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 117
           ++  K  S  TA I+D EV+ L+E  YSRA  I+N +IDILH +   LI+ ET+D
Sbjct: 531 VAKAKHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETID 585

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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score =  102 bits (253), Expect = 7e-22
 Identities = 51/122 (41%), Positives = 78/122 (63%)
 Frame = -3

Query: 461 GGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQ 282
           GGR+ EE+I+G  NV+TGA +D    + +AR MV ++GFSKK+G +      G  FLG+ 
Sbjct: 471 GGRLAEEIIYGVNNVSTGAHNDIKVATNLARNMVTQWGFSKKLGPLLYSEEEGEIFLGRT 530

Query: 281 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 102
           ++  K  S  TA I+D EV+ LVE  Y+RA +I+  ++DILH + + LI+ ET++  +  
Sbjct: 531 VTKSKHMSDETARIIDEEVKLLVEKNYNRAKKILEENLDILHAMKDALIKYETINSRQID 590

Query: 101 SL 96
            L
Sbjct: 591 DL 592

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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score =  101 bits (251), Expect = 1e-21
 Identities = 48/129 (37%), Positives = 81/129 (62%)
 Frame = -3

Query: 482 TKWTVALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGG 303
           +K +    GR+ E++I+G+ N++TGAS+D    + +AR MV ++GFS+K+G +      G
Sbjct: 209 SKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGPILYTEDEG 268

Query: 302 NPFLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKET 123
             FLG+ M+  K  S  TA  +D EVR +V   Y+RA +I+  ++DILH + + L++ ET
Sbjct: 269 EVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYET 328

Query: 122 VDGEEFMSL 96
           ++ E+   L
Sbjct: 329 IEEEQIKQL 337

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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score =  101 bits (251), Expect = 1e-21
 Identities = 48/129 (37%), Positives = 81/129 (62%)
 Frame = -3

Query: 482 TKWTVALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGG 303
           +K +    GR+ E++I+G+ N++TGAS+D    + +AR MV ++GFS+K+G +      G
Sbjct: 463 SKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGPILYTEDEG 522

Query: 302 NPFLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKET 123
             FLG+ M+  K  S  TA  +D EVR +V   Y+RA +I+  ++DILH + + L++ ET
Sbjct: 523 EVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYET 582

Query: 122 VDGEEFMSL 96
           ++ E+   L
Sbjct: 583 IEEEQIKQL 591

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>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  101 bits (251), Expect = 1e-21
 Identities = 57/131 (43%), Positives = 84/131 (64%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           V + GRV EE+IFG+  VT+GASSD    + +AR MV + G S  IG +  GS+  + + 
Sbjct: 471 VYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIFHGSNSDDMY- 529

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
           G+Q S++   S ATA+++DAEV+ ++   Y  A  I+  HID LH LAN LIE ET+ G+
Sbjct: 530 GRQSSNE--ISEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQ 587

Query: 110 EFMSLFIDGQA 78
           +  +L + G+A
Sbjct: 588 QIKNL-LSGRA 597

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>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score =  100 bits (250), Expect = 2e-21
 Identities = 51/125 (40%), Positives = 76/125 (60%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           VALGGR  EE +FG   VTTGAS+D  QV+ +ARQMV RFG S  +G + + +     FL
Sbjct: 469 VALGGRAAEEAVFGNAEVTTGASNDLQQVTNLARQMVTRFGMS-SLGPLCLETGNEEIFL 527

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
           G+ M    + S      +DA+VR ++E  Y +  +++  +  ++ R+   L+EKET+DG+
Sbjct: 528 GRDMRLMPEVSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLDGK 587

Query: 110 EFMSL 96
           EF  L
Sbjct: 588 EFRQL 592

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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score =  100 bits (250), Expect = 2e-21
 Identities = 53/129 (41%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
 Frame = -3

Query: 464 LGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA-IGSSGGNPFLG 288
           LGGRV EEV FG+  V+TGA +DF + + +AR+MV  +G S+K+G +  I  SGG  FLG
Sbjct: 484 LGGRVAEEVTFGE--VSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLG 541

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 108
           + + ++++YS A A  +D EV+ +++  Y+R  QI+  + D L  +A  L++ ET+D E+
Sbjct: 542 RDIQNEQNYSDAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQ 601

Query: 107 FMSLFIDGQ 81
             SL  +G+
Sbjct: 602 IKSLVHEGK 610

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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  100 bits (250), Expect = 2e-21
 Identities = 52/128 (40%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
 Frame = -3

Query: 464 LGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSS-GGNPFLG 288
           LGGRV EE+IFG+  V+TGA +DF + + +AR+MV  FG S+K+G +  G S GG  FLG
Sbjct: 479 LGGRVAEEIIFGE--VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLG 536

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 108
           +  +++++YS   A  +D E++ +++  Y RA QI+  + D L  +A  L++ ET+D E+
Sbjct: 537 RDFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQ 596

Query: 107 FMSLFIDG 84
              L   G
Sbjct: 597 IKHLIDHG 604

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>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 51/123 (41%), Positives = 76/123 (61%)
 Frame = -3

Query: 464 LGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQ 285
           LGGRV EEVIFG   VTTGA +D  +++ +ARQMV + G S  +G VA+   G   F G 
Sbjct: 528 LGGRVAEEVIFGDDEVTTGAGNDIEKITYLARQMVTKLGMSS-LGLVALEEEGDRNFSGG 586

Query: 284 QMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 105
               + +YS   A  +D E++ +V  A+ RAT+II  + +++  L + LI++ET++GE F
Sbjct: 587 DWGKRSEYSEDIAARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHF 646

Query: 104 MSL 96
             L
Sbjct: 647 RQL 649

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>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 95.1 bits (235), Expect = 9e-20
 Identities = 48/129 (37%), Positives = 80/129 (62%)
 Frame = -3

Query: 482 TKWTVALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGG 303
           +K   AL GR  EE++FG   VT GA++D  QV+ +ARQMV +FG SK +G + + +S  
Sbjct: 482 SKIIAALAGRAMEEIVFGLPEVTIGAANDIKQVTFMARQMVTKFGMSK-VGPICLENSSS 540

Query: 302 NPFLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKET 123
             F+G+ +  + + S      VD EVR +++  Y +A  I++ +  ++ R+ N L+EKET
Sbjct: 541 EVFIGRDLMGRHELSEEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKET 600

Query: 122 VDGEEFMSL 96
           ++ +EFM +
Sbjct: 601 IEAKEFMRI 609

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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 51/128 (39%), Positives = 77/128 (60%)
 Frame = -3

Query: 464 LGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQ 285
           +GGR+ EE++FG    T GAS+D  + + +AR MV  +G SKK+G V+        F+G+
Sbjct: 512 MGGRLGEEIVFGVA--TPGASNDIEKATHIARSMVTEYGMSKKLGMVSY-EGDHQVFIGR 568

Query: 284 QMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 105
                K YS ATA ++D EVR ++  AY RA + I TH +    +A  L++ ET+D ++ 
Sbjct: 569 DYGQTKTYSEATAVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQI 628

Query: 104 MSLFIDGQ 81
           MSLF  G+
Sbjct: 629 MSLFKTGK 636

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>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 89.7 bits (221), Expect = 4e-18
 Identities = 51/137 (37%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
 Frame = -3

Query: 485 RTKWTVALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSG 306
           R +    LGGR  EE++F   ++TTGA++D  + + +A QMV  +G SK +G +A     
Sbjct: 488 RDQIATLLGGRAAEEIVFD--SITTGAANDLQRATDLAEQMVTTYGMSKVLGPLAYDKGQ 545

Query: 305 GNPFLGQQMSS-QKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEK 129
            N FLGQ M + ++  S  TA  +D EV+E+VE  +++A  I+  + D+L  +A  ++EK
Sbjct: 546 QNNFLGQGMGNPRRMVSDDTAKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEK 605

Query: 128 ETVDGEEFMSLFIDGQA 78
           E ++GEE   L    QA
Sbjct: 606 EVIEGEELHHLLGQVQA 622

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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 49/129 (37%), Positives = 74/129 (57%)
 Frame = -3

Query: 479 KWTVALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGN 300
           K  V LGGR  EEV FG+  +TTGA +D  + + +A +MV  +G S K+G +AI     N
Sbjct: 469 KILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAI-RRVAN 527

Query: 299 PFLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETV 120
           PFLG  M++  D S      +D EV+ ++   Y +A  I+  + + L  +   L+EKET+
Sbjct: 528 PFLG-GMTTAVDTSPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETI 586

Query: 119 DGEEFMSLF 93
             EEF+ +F
Sbjct: 587 TCEEFVEVF 595

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>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
            (YME1-like protein 1) (ATP-dependent metalloprotease
            FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
            (PAMP)
          Length = 773

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 46/130 (35%), Positives = 75/130 (57%)
 Frame = -3

Query: 470  VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
            V++GGRV EE+IFG  ++TTGASSDF   +++A++MV +FG S+K+G +    +G     
Sbjct: 653  VSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG----- 707

Query: 290  GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
                      S  T   ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +
Sbjct: 708  --------KLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAK 759

Query: 110  EFMSLFIDGQ 81
            E + + ++G+
Sbjct: 760  E-IQIVLEGK 768

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>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 46/130 (35%), Positives = 75/130 (57%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           V++GGRV EE+IFG  ++TTGASSDF   +++A++MV +FG S+K+G +    +G     
Sbjct: 595 VSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG----- 649

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
                     S  T   ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +
Sbjct: 650 --------KLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAK 701

Query: 110 EFMSLFIDGQ 81
           E + + ++G+
Sbjct: 702 E-IQIVLEGK 710

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>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 46/130 (35%), Positives = 75/130 (57%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           V++GGRV EE+IFG  ++TTGASSDF   +++A++MV +FG S+K+G +    +G     
Sbjct: 595 VSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG----- 649

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
                     S  T   ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +
Sbjct: 650 --------KLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAK 701

Query: 110 EFMSLFIDGQ 81
           E + + ++G+
Sbjct: 702 E-IQIVLEGK 710

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>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 51/128 (39%), Positives = 77/128 (60%)
 Frame = -3

Query: 464 LGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQ 285
           +GGRV EE+IF     TTGAS+DF Q +++AR MV  +G S+K+G V     G +  LG 
Sbjct: 505 MGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMSEKLGPVQY--EGNHAMLGA 560

Query: 284 QMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 105
           Q S QK  S  TA  +D EVR L+  A ++A +II ++ +    +A  L++ ET+D  + 
Sbjct: 561 Q-SPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQI 619

Query: 104 MSLFIDGQ 81
            +L+  G+
Sbjct: 620 KALYETGK 627

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>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 51/128 (39%), Positives = 77/128 (60%)
 Frame = -3

Query: 464 LGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQ 285
           +GGRV EE+IF     TTGAS+DF Q +++AR MV  +G S+K+G V     G +  LG 
Sbjct: 505 MGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMSEKLGPVQY--EGNHAMLGA 560

Query: 284 QMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 105
           Q S QK  S  TA  +D EVR L+  A ++A +II ++ +    +A  L++ ET+D  + 
Sbjct: 561 Q-SPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQI 619

Query: 104 MSLFIDGQ 81
            +L+  G+
Sbjct: 620 KALYETGK 627

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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 46/123 (37%), Positives = 75/123 (60%)
 Frame = -3

Query: 464 LGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQ 285
           LGGRV E++ FGQ  +TTGA  D  +V++ A   + +FG S+K+GQV+       P  G+
Sbjct: 495 LGGRVAEQLFFGQ--ITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDF----PRQGE 548

Query: 284 QMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 105
            M  +K YS ATA ++D EVR LV +AY+R  +++    + + ++   L+EKE ++  + 
Sbjct: 549 TMV-EKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADM 607

Query: 104 MSL 96
           + L
Sbjct: 608 IEL 610

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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 78.6 bits (192), Expect = 9e-15
 Identities = 46/125 (36%), Positives = 73/125 (58%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           + LGGRV EE+ FG+  +TTGA  D  +V++ A   + +FG ++K+GQ++       P  
Sbjct: 626 MTLGGRVSEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDL----PRQ 679

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
           G  M  +K YS ATA ++D EVR L+  AY R   ++      + ++A LL+EKE +D  
Sbjct: 680 GD-MVLEKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKN 738

Query: 110 EFMSL 96
           + + L
Sbjct: 739 DMVQL 743

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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 45/125 (36%), Positives = 72/125 (57%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           + LGGR  EE+ FG+  +TTGA  D  +V++ A   + +FG ++K+GQ++       P  
Sbjct: 627 MTLGGRASEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDL----PRQ 680

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
           G  M  +K YS ATA ++D EVR L+  AY R   ++      + ++A LL+EKE +D  
Sbjct: 681 GD-MVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKN 739

Query: 110 EFMSL 96
           + + L
Sbjct: 740 DMVEL 744

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>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           V +GGRV EE+IFG   VTTGA+ D  + +++A QMV+ FG S K+G           F 
Sbjct: 516 VMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVFGMSDKVGL--------RDFT 567

Query: 290 GQQMSSQ----KDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKET 123
            Q   S      D +  TA+++DAE+  +++ +Y RA  I+ T       LA  L+E ET
Sbjct: 568 AQDNESALVKVSDLAPQTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYET 627

Query: 122 VDGEEFMSLFIDGQ 81
           +  +E +   I GQ
Sbjct: 628 LSADE-VKRVISGQ 640

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>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 75.9 bits (185), Expect = 6e-14
 Identities = 38/119 (31%), Positives = 70/119 (58%)
 Frame = -3

Query: 464 LGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQ 285
           +GGR  E +I+G+ N++TGAS D  + +++AR+MV  +G S  +G +       NPFLG+
Sbjct: 530 MGGRAAEMIIYGKENISTGASDDISRATKIARKMVTEWGMS-ALGPIKYEEDTENPFLGR 588

Query: 284 QMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 108
              S+  +    A  +D E+R+++  +   A + I  ++++L  + + L+E ET+  EE
Sbjct: 589 DY-SKGTFGSKMAHEIDLEIRKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEE 646

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>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 75.9 bits (185), Expect = 6e-14
 Identities = 44/130 (33%), Positives = 73/130 (56%)
 Frame = -3

Query: 485 RTKWTVALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSG 306
           R +  +ALGGRV EE+ F   +VT+GA  DF +V+++A  MV   G S KIG ++   + 
Sbjct: 607 RHRMIMALGGRVSEELHFP--SVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQND 664

Query: 305 GNPFLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKE 126
           GN          K +S  TA  +D EV+ +V+ A+   T+++  ++D +  +A  L+ KE
Sbjct: 665 GN------FKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKE 718

Query: 125 TVDGEEFMSL 96
            +  E+ + L
Sbjct: 719 AITREDMIRL 728

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>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 46/116 (39%), Positives = 64/116 (55%)
 Frame = -3

Query: 467 ALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLG 288
           A+GGR  EE I+G   +TTGASSDF + + +AR MV + G S K+GQV        P  G
Sbjct: 549 AMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMVTQLGMS-KLGQVQY-----VPSQG 602

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETV 120
              S+ K YS  TA  +D E+  ++E  Y +A  II ++   L  L   L+  ET+
Sbjct: 603 TLPSNVKLYSEQTAKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAETI 658

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>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
            RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 44/130 (33%), Positives = 73/130 (56%)
 Frame = -3

Query: 485  RTKWTVALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSG 306
            + + T++LGGRV EE+ F   +VT+GAS DF +V+ +A  MV   G S KIG V      
Sbjct: 662  KDRMTMSLGGRVSEELHFP--SVTSGASDDFKKVTSMATAMVTELGMSDKIGWV------ 713

Query: 305  GNPFLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKE 126
             N          K +S  T DI+D+EV  +V+  + R T+++    + + ++A +L++KE
Sbjct: 714  -NYQKRDDSDLTKPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKE 772

Query: 125  TVDGEEFMSL 96
             +  E+ + L
Sbjct: 773  VLTREDMIDL 782

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>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 45/116 (38%), Positives = 65/116 (56%)
 Frame = -3

Query: 467 ALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLG 288
           A+GGR  EE I+G   +TTGASSDF + + +AR MV + G S K+GQV    S G    G
Sbjct: 546 AMGGRAAEEEIYGPLEITTGASSDFYKATNIARAMVTQLGMS-KLGQVQYVPSQGTVPPG 604

Query: 287 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETV 120
            ++ S++     TA  +D E+  ++E  Y +A  II T+   L  L   L+  ET+
Sbjct: 605 TKLFSEQ-----TAKDIDFEINAIIEEQYKKARTIIKTNRKELELLVEALLIAETI 655

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>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 42/121 (34%), Positives = 64/121 (52%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           V +GG++ EE+I+G+ N T+G  SD    +  AR MV ++G S  +G V +         
Sbjct: 594 VCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVNLS-------- 645

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
                + + +S    DI D EV EL++ +  RA +++      LHRLA  LIE ET+D  
Sbjct: 646 ----ENWESWSNKIRDIADNEVIELLKDSEERARRLLTKKNVELHRLAQGLIEYETLDAH 701

Query: 110 E 108
           E
Sbjct: 702 E 702

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>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 72.0 bits (175), Expect = 8e-13
 Identities = 41/125 (32%), Positives = 68/125 (54%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           V +GGRV EE++FG   VT GA+ DF + + +A+ MV+RFGFS KIG   I         
Sbjct: 479 VLMGGRVGEELVFGADKVTNGAADDFRKATILAQNMVKRFGFSSKIGPRVIPD------- 531

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
               +  +    AT D++D EV +L+  + +R   ++++       LA  L+  ET+  +
Sbjct: 532 ----TQDEQLGEATRDLIDKEVDQLLNDSLTRVRTLLSSQSKQHKLLAEALLHFETLTKD 587

Query: 110 EFMSL 96
           E +++
Sbjct: 588 EVLAV 592

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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 41/125 (32%), Positives = 69/125 (55%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           +ALGGR  E + F +  VT+GA  D  +V+R+A  MV++FG +  IG ++   +      
Sbjct: 628 MALGGRASEALSFNE--VTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQE---- 681

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
           G     ++ +S     ++D E R LV  AY    +++  ++D L  LAN L+EKE ++ E
Sbjct: 682 GLMGIGRRPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYE 741

Query: 110 EFMSL 96
           +  +L
Sbjct: 742 DIEAL 746

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>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 38/122 (31%), Positives = 65/122 (53%)
 Frame = -3

Query: 470 VALGGRVXEEVIFGQXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFL 291
           V L GR  E V FG+  V+TGA +D  + + + R+M+  +G S+K   VA+   G     
Sbjct: 457 VLLSGRAAEFVAFGE--VSTGAGNDISRATDIVRKMITDYGMSEKFQNVALTRRGTGYLA 514

Query: 290 GQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGE 111
             Q++  ++YS  T   VD EV  ++   Y     ++    ++L  +A  L+E+ET++ +
Sbjct: 515 EPQLA--REYSECTQQYVDEEVARVLAERYRAVVALLTEKKELLEYIATRLLERETIERD 572

Query: 110 EF 105
           EF
Sbjct: 573 EF 574

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>CK016_MOUSE (Q9JJR6) Protein C11orf16 homolog|
          Length = 402

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 304 PPDDPIATCPIFLLNPNLSTICLATRET----CMKSLDAPVVTLXW 429
           PP D   TCP     P L+T C  TR T    C+ ++D P   L W
Sbjct: 31  PPWDMSFTCPFATQAPWLATHCTFTRCTACCPCLHTVDRPWPGLRW 76

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>YEA8_SCHPO (O14073) Putative dipeptidyl aminopeptidase C2E11.08 (EC 3.4.14.-)|
          Length = 793

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -2

Query: 438 DLWPXQRDNWGIQRLHAGLTCRQTNG*KIWVQQEDRASCDWVIWWKP 298
           DL+  + D   +QRL    T    NG   W+ +E+  S    IWW P
Sbjct: 190 DLYVRKNDG-NVQRLTYDGTVDVFNGLTDWIYEEEVLSSPSTIWWSP 235

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>AROA_LISIN (Q92A85) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 428

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 365 MVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 237
           M+ +FG   ++  + I   GG  F+GQ+M+   D S A   IV
Sbjct: 199 MIRQFGGEIEMDGLTIRVKGGQKFIGQEMTVPGDVSSAAFFIV 241

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>ARGJ_METAC (Q8TK55) Arginine biosynthesis bifunctional protein argJ [Includes:|
           Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine
           acetyltransferase) (Ornithine transacetylase) (OATase);
           Amino-acid acetyltransferase (EC 2.3.1.1)
           (N-acetylglutamate syn
          Length = 395

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/70 (21%), Positives = 32/70 (45%)
 Frame = -3

Query: 407 ASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAE 228
           A+   M   +  +++        +IG +A GS    P +G  +      ++  AD++DA 
Sbjct: 140 AAKAIMTTDKALKEVAVELDCGVRIGAIAKGSGMIEPNMGTMLCFAYTDALVPADVLDAA 199

Query: 227 VRELVETAYS 198
           +R  V+  ++
Sbjct: 200 LRIAVDKTFN 209

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>CH601_CORDI (Q6NJ37) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 539

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 428 QXNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNP 297
           Q  V  G  S  +Q+S+  R+  + F    KIG +A+ ++   P
Sbjct: 406 QEGVIAGGGSALVQISKELREFAQEFEGDAKIGVIALANALAKP 449


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,970,373
Number of Sequences: 219361
Number of extensions: 1123271
Number of successful extensions: 3632
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 3529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3594
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result