ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal5k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full ... 761 0.0
2gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full i... 757 0.0
3gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full ... 735 0.0
4dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 436 e-119
5dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 436 e-119
6gb|AY103957.1| Zea mays PCO116832 mRNA sequence 414 e-112
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
8dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
9dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH prot... 117 4e-23
10emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein 109 9e-21
11ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent pepti... 92 2e-15
12emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease 92 2e-15
13gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH pr... 92 2e-15
14gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH pr... 92 2e-15
15ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-d... 86 1e-13
16gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, comp... 86 1e-13
17emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial 78 3e-11
18gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genom... 74 5e-10
19gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, comple... 62 2e-06
20emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
21dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 56 1e-04
22gb|BT016970.1| Zea mays clone E04912707E08.c mRNA sequence 40 6.7
23gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete... 40 6.7
24gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 6.7
25gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosom... 40 6.7
26gb|AY094953.1| Drosophila melanogaster RH69586 full insert cDNA 40 6.7
27emb|AL096773.6|HS1000E10 Human DNA sequence from clone RP5-1000E... 40 6.7
28emb|BX537714.1|HSM805789 Homo sapiens genomic DNA; cDNA DKFZp686... 40 6.7
29ref|NM_169826.1| Drosophila melanogaster CG31224-RA (CG31224), mRNA 40 6.7
30ref|NM_078959.3| Drosophila melanogaster Peroxiredoxin 2540 CG11... 40 6.7
31gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 6.7
32gb|AY075377.1| Drosophila melanogaster LD06123 full length cDNA 40 6.7
33gb|AY070952.1| Drosophila melanogaster RE05093 full length cDNA 40 6.7
34gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, r... 40 6.7
35gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, r... 40 6.7
36gb|AC136290.2| Homo sapiens chromosome 3 clone CTD-2104B13, comp... 40 6.7
37gb|BT003589.1| Drosophila melanogaster LD03662 full insert cDNA 40 6.7
38gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61... 40 6.7
39gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21... 40 6.7
40dbj|AB100244.1| Penicillium camemberti pyrG gene for orotidine-5... 40 6.7
41dbj|AP006192.1| Homo sapiens genomic DNA, chromosome 3, clone:RP... 40 6.7
42dbj|AP006190.1| Homo sapiens genomic DNA, chromosome 3, clone:RP... 40 6.7
43gb|CP000036.1| Shigella boydii Sb227, complete genome 40 6.7
44gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 6.7
45dbj|AP000493.1| Homo sapiens genomic DNA, chromosome 3p21.3, clo... 40 6.7 
>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence
          Length = 1556

 Score =  761 bits (384), Expect = 0.0
 Identities = 425/438 (97%), Gaps = 1/438 (0%)
 Strand = Plus / Minus

                                                                        
Query: 56   cgacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccc 115
            ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1366 cgacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccc 1307

                                                                        
Query: 116  cgtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtggg 175
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 cgtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtggg 1247

                                                                        
Query: 176  tgttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcat 235
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1246 tgttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcgt 1187

                                                                        
Query: 236  ctacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaaga 295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 ctacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaaga 1127

                                                                        
Query: 296  aagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatc 355
            ||||||||||||||||||| || ||||| |||||||| |||||||| |||||||||||||
Sbjct: 1126 aagggtttccaccagatgatccgatcgcgacttgcccaatcttcttactgaacccaaatc 1067

                                                                        
Query: 356  tttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttg 415
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1066 tttcaaccatttgtctggcgacacgtgagacctgcatgaagtcactggatgccccagttg 1007

                                                                        
Query: 416  tcacgttgncttggccaaagatcacctcctcggnaaccctgccaccaagtgccacagtcc 475
            |||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 1006 tcacattgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacag-cc 948

                              
Query: 476  atttggttctctaggtag 493
            ||||||||||||||||||
Sbjct: 947  atttggttctctaggtag 930
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>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA
           sequence
          Length = 654

 Score =  757 bits (382), Expect = 0.0
 Identities = 462/486 (95%), Gaps = 5/486 (1%)
 Strand = Plus / Minus

                                                                       
Query: 11  tggaccctcgtataaccgccgaaaacatacagggncatgacggggcgacttatgcgacaa 70
           ||||||||||||||| | | ||||||||||| || || |||  | ||||||||||||| |
Sbjct: 508 tggaccctcgtataatcacggaaaacatacaagg-cacgacaagtcgacttatgcgacga 450

                                                                       
Query: 71  acagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacggtctcct 130
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acagctctgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacggtctcct 390

                                                                       
Query: 131 tctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatgatctgcg 190
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 389 tctcgatcaggaggttggcgagcctgtggaggatatcgatgtgggtgttgatgatctgcg 330

                                                                       
Query: 191 tcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatgtccgccg 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatgtccgccg 270

                                                                       
Query: 251 tggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt---ccac 307
           |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||
Sbjct: 269 tggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccac 210

                                                                       
Query: 308 cagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccattt 367
           |||||||||| || || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 209 cagatgacccgattgcgacttgcccaatcttcttgctgaacccaaatctttcaaccattt 150

                                                                       
Query: 368 gtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgnctt 427
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 149 gtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacattgtctt 90

                                                                       
Query: 428 ggccaaagatcacctcctcggnaaccctgccaccaagtgccacagtccatttggttctct 487
           |||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 89  ggccaaagataacctcctcggcaaccctgccaccaagtgccacag-ccatttggttctct 31

                 
Query: 488 aggtag 493
           ||||||
Sbjct: 30  aggtag 25
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>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA
           sequence
          Length = 890

 Score =  735 bits (371), Expect = 0.0
 Identities = 421/437 (96%), Gaps = 1/437 (0%)
 Strand = Plus / Minus

                                                                       
Query: 57  gacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctcccc 116
           |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctcccc 642

                                                                       
Query: 117 gtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggt 176
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gtccacggtctccttctcgatgaggaggttggcgagcctgtggaggatgtcgatgtgggt 582

                                                                       
Query: 177 gttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatc 236
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 581 gttgatgatctgcgtcgcgcgcgagtaggccgtctccacgagttccctgacctcggcgtc 522

                                                                       
Query: 237 tacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaa 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaa 462

                                                                       
Query: 297 agggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatct 356
           ||||||||||||||||||||| || || |||||||| |||||||||||||||||||| ||
Sbjct: 461 agggtttccaccagatgacccgatggcgacttgcccaatcttcttgctgaacccaaacct 402

                                                                       
Query: 357 ttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgt 416
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 401 ttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccggttgt 342

                                                                       
Query: 417 cacgttgncttggccaaagatcacctcctcggnaaccctgccaccaagtgccacagtcca 476
           ||| ||| |||| ||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 341 cacattgtcttgcccaaagatcacctcctcggcaaccctgccaccaagtgccacag-cca 283

                            
Query: 477 tttggttctctaggtag 493
           |||||||||||||||||
Sbjct: 282 tttggttctctaggtag 266
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>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full
            insert sequence
          Length = 2378

 Score =  436 bits (220), Expect = e-119
 Identities = 378/430 (87%), Gaps = 1/430 (0%)
 Strand = Plus / Minus

                                                                        
Query: 64   gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 123
            |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 2093 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 2034

                                                                        
Query: 124  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 183
            ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 2033 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1974

                                                                        
Query: 184  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 243
            |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 1973 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 1914

                                                                        
Query: 244  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 303
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1913 tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 1854

                                                                        
Query: 304  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 363
            ||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1853 ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 1794

                                                                        
Query: 364  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 423
            |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || 
Sbjct: 1793 atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 1734

                                                                        
Query: 424  ncttggccaaagatcacctcctcggnaaccctgccaccaagtgccacagtccatttggtt 483
             ||||||||||||||||||| |||| |||||| |||||||| || || | ||||||||||
Sbjct: 1733 tcttggccaaagatcacctcttcggcaacccttccaccaagagctac-ggccatttggtt 1675

                      
Query: 484  ctctaggtag 493
            ||||||||||
Sbjct: 1674 ctctaggtag 1665
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>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full
            insert sequence
          Length = 1325

 Score =  436 bits (220), Expect = e-119
 Identities = 378/430 (87%), Gaps = 1/430 (0%)
 Strand = Plus / Minus

                                                                        
Query: 64   gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 123
            |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 1149 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 1090

                                                                        
Query: 124  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 183
            ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 1089 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1030

                                                                        
Query: 184  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 243
            |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 1029 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 970

                                                                        
Query: 244  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 303
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 969  tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 910

                                                                        
Query: 304  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 363
            ||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 909  ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 850

                                                                        
Query: 364  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 423
            |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || 
Sbjct: 849  atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 790

                                                                        
Query: 424  ncttggccaaagatcacctcctcggnaaccctgccaccaagtgccacagtccatttggtt 483
             ||||||||||||||||||| |||| |||||| |||||||| || || | ||||||||||
Sbjct: 789  tcttggccaaagatcacctcttcggcaacccttccaccaagagctac-ggccatttggtt 731

                      
Query: 484  ctctaggtag 493
            ||||||||||
Sbjct: 730  ctctaggtag 721
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>gb|AY103957.1| Zea mays PCO116832 mRNA sequence
          Length = 1820

 Score =  414 bits (209), Expect = e-112
 Identities = 370/423 (87%), Gaps = 1/423 (0%)
 Strand = Plus / Minus

                                                                        
Query: 64   gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 123
            |||||||||||||| ||||| ||||| ||||| | |||||||||||||||||||||||||
Sbjct: 1445 gcgacaaacagctcggcctggccgtcaatgaacaagctcatgaactcctccccgtccacg 1386

                                                                        
Query: 124  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 183
            |||||||||||||||||||| | ||||||| ||||||||||||||||||| ||| |||| 
Sbjct: 1385 gtctccttctcgatcaggagctgggcgagcttgtggaggatgtcgatgtgcgtggtgatt 1326

                                                                        
Query: 184  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 243
            |||||| | || |  ||||||||| |||||||||||||||| |||||||| || || |  
Sbjct: 1325 atctgccttgctctagagtaggccttctccacgagttccctcacctcggcgtccacaaca 1266

                                                                        
Query: 244  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 303
            ||||| || ||||| ||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 1265 tccgctgttgccatagagtagtccttctggcttgacatctgttgccccaagaaagggttt 1206

                                                                        
Query: 304  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 363
            ||||| | |  ||| ||||||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1205 ccacccggtcccccgatcgcaacttggccgatcttcttactgaatccaaatctttcgacc 1146

                                                                        
Query: 364  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 423
            || || || ||||||||||| || |||||||||||| |||| || || ||||||||||||
Sbjct: 1145 atctgccttgcgacacgtgacacttgcatgaagtcgttggaagctcctgttgtcacgttg 1086

                                                                        
Query: 424  ncttggccaaagatcacctcctcggnaaccctgccaccaagtgccacagtccatttggtt 483
             |||||||||||||||||||||| | ||||||||||||||| || |||| ||||||||||
Sbjct: 1085 tcttggccaaagatcacctcctcagcaaccctgccaccaagggctacag-ccatttggtt 1027

               
Query: 484  ctc 486
            |||
Sbjct: 1026 ctc 1024
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  210 bits (106), Expect = 3e-51
 Identities = 158/176 (89%)
 Strand = Plus / Plus

                                                                            
Query: 282      ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 341
                |||||||||||||||||| |||||||||| |   ||||||||||||||||||||||||||
Sbjct: 30359326 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 30359385

                                                                            
Query: 342      gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 401
                |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| |
Sbjct: 30359386 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 30359445

                                                                        
Query: 402      ggatgccccagttgtcacgttgncttggccaaagatcacctcctcggnaaccctgc 457
                ||| |||||||||||||| ||  ||||||||||||||||||| |||| ||||||||
Sbjct: 30359446 ggaggccccagttgtcacattttcttggccaaagatcacctcttcggcaaccctgc 30359501



 Score =  210 bits (106), Expect = 3e-51
 Identities = 193/222 (86%)
 Strand = Plus / Plus

                                                                            
Query: 64       gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 123
                |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 30354728 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 30354787

                                                                            
Query: 124      gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 183
                ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 30354788 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 30354847

                                                                            
Query: 184      atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 243
                |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 30354848 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 30354907

                                                          
Query: 244      tccgccgtggccatcgagtagtccttctggctcgacatctgc 285
                ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 30354908 tccgcggtggccatcgagtagtccttctggctcgacatctgc 30354949



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 474      ccatttggttctctaggtag 493
                ||||||||||||||||||||
Sbjct: 30359606 ccatttggttctctaggtag 30359625
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>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548E04
          Length = 138037

 Score =  210 bits (106), Expect = 3e-51
 Identities = 158/176 (89%)
 Strand = Plus / Plus

                                                                          
Query: 282    ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 341
              |||||||||||||||||| |||||||||| |   ||||||||||||||||||||||||||
Sbjct: 105921 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 105980

                                                                          
Query: 342    gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 401
              |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| |
Sbjct: 105981 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 106040

                                                                      
Query: 402    ggatgccccagttgtcacgttgncttggccaaagatcacctcctcggnaaccctgc 457
              ||| |||||||||||||| ||  ||||||||||||||||||| |||| ||||||||
Sbjct: 106041 ggaggccccagttgtcacattttcttggccaaagatcacctcttcggcaaccctgc 106096



 Score =  210 bits (106), Expect = 3e-51
 Identities = 193/222 (86%)
 Strand = Plus / Plus

                                                                          
Query: 64     gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 123
              |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 101323 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 101382

                                                                          
Query: 124    gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 183
              ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 101383 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 101442

                                                                          
Query: 184    atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 243
              |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 101443 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 101502

                                                        
Query: 244    tccgccgtggccatcgagtagtccttctggctcgacatctgc 285
              ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 101503 tccgcggtggccatcgagtagtccttctggctcgacatctgc 101544



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 474    ccatttggttctctaggtag 493
              ||||||||||||||||||||
Sbjct: 106201 ccatttggttctctaggtag 106220
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>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds
          Length = 2447

 Score =  117 bits (59), Expect = 4e-23
 Identities = 196/241 (81%), Gaps = 1/241 (0%)
 Strand = Plus / Minus

                                                                        
Query: 253  gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 312
            ||||| |||||||| |||||| | |||||||| || || | |||||| ||||| |||  |
Sbjct: 1952 gccatggagtagtctttctgggttgacatctgttgacctaggaaaggatttcctccacct 1893

                                                                        
Query: 313  gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 372
               ||||| |||||||| || ||||| ||||||||||| ||||| |||||||| || || 
Sbjct: 1892 cctccaatggcaacttgtccaatctttttgctgaaccctaatctctcaaccatctgcctt 1833

                                                                        
Query: 373  gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgncttggcca 432
            || || ||||| || |||||||| ||| | |||||||||||||| |||||  |||| |||
Sbjct: 1832 gccactcgtgaaacttgcatgaaatcgttagatgccccagttgttacgttatcttgtcca 1773

                                                                        
Query: 433  aagatcacctcctcggnaaccctgccaccaagtgccacagtccatttggttctctaggta 492
            || || |||||||| | ||||||  |||||||||| || | ||||||| |||||||||||
Sbjct: 1772 aaaataacctcctcagcaaccctttcaccaagtgcaactg-ccatttgattctctaggta 1714

             
Query: 493  g 493
            |
Sbjct: 1713 g 1713
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>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein
          Length = 1989

 Score =  109 bits (55), Expect = 9e-21
 Identities = 195/241 (80%), Gaps = 1/241 (0%)
 Strand = Plus / Minus

                                                                        
Query: 253  gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 312
            ||||| ||||||||||||||| | |||||||| ||||| | |||||||||||| |||  |
Sbjct: 1864 gccatggagtagtccttctgggttgacatctgttggcctaggaaagggtttcctccacct 1805

                                                                        
Query: 313  gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 372
               || || |||||||| || ||||| |||||||| || ||||| |||||||| || || 
Sbjct: 1804 cctccgatggcaacttggcctatctttttgctgaaacctaatctctcaaccatctgcctc 1745

                                                                        
Query: 373  gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgncttggcca 432
            || || ||||| || |||||||| ||  | ||||| ||||| || |||||| |||  |||
Sbjct: 1744 gccactcgtgaaacttgcatgaaatcattagatgcgccagtggttacgttgtcttctcca 1685

                                                                        
Query: 433  aagatcacctcctcggnaaccctgccaccaagtgccacagtccatttggttctctaggta 492
            || || |||||||| | |||||| ||||||||||| || | ||||||| |||||||||||
Sbjct: 1684 aaaataacctcctcagcaacccttccaccaagtgcaactg-ccatttgattctctaggta 1626

             
Query: 493  g 493
            |
Sbjct: 1625 g 1625
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>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/
            metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds
          Length = 2473

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 141/172 (81%), Gaps = 1/172 (0%)
 Strand = Plus / Minus

                                                                        
Query: 322  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 381
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 2022 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1963

                                                                        
Query: 382  gagacctgcatgaagtcgctggatgccccagttgtcacgttgncttggccaaagatcacc 441
            || ||||||||||| ||  | ||||| ||||| ||||| ||  | |  ||||||||||||
Sbjct: 1962 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1903

                                                                
Query: 442  tcctcggnaaccctgccaccaagtgccacagtccatttggttctctaggtag 493
            ||||| | |||||| || |||||||| |||| ||||||| ||||| ||||||
Sbjct: 1902 tcctctgcaacccttccgccaagtgcaacag-ccatttgattctcaaggtag 1852



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 85   ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 143
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2259 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2201
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>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease
          Length = 2447

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 141/172 (81%), Gaps = 1/172 (0%)
 Strand = Plus / Minus

                                                                        
Query: 322  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 381
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 2020 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1961

                                                                        
Query: 382  gagacctgcatgaagtcgctggatgccccagttgtcacgttgncttggccaaagatcacc 441
            || ||||||||||| ||  | ||||| ||||| ||||| ||  | |  ||||||||||||
Sbjct: 1960 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1901

                                                                
Query: 442  tcctcggnaaccctgccaccaagtgccacagtccatttggttctctaggtag 493
            ||||| | |||||| || |||||||| |||| ||||||| ||||| ||||||
Sbjct: 1900 tcctctgcaacccttccgccaagtgcaacag-ccatttgattctcaaggtag 1850



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 85   ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 143
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2257 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2199
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>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2182

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 141/172 (81%), Gaps = 1/172 (0%)
 Strand = Plus / Minus

                                                                        
Query: 322  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 381
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1889 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1830

                                                                        
Query: 382  gagacctgcatgaagtcgctggatgccccagttgtcacgttgncttggccaaagatcacc 441
            || ||||||||||| ||  | ||||| ||||| ||||| ||  | |  ||||||||||||
Sbjct: 1829 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1770

                                                                
Query: 442  tcctcggnaaccctgccaccaagtgccacagtccatttggttctctaggtag 493
            ||||| | |||||| || |||||||| |||| ||||||| ||||| ||||||
Sbjct: 1769 tcctctgcaacccttccgccaagtgcaacag-ccatttgattctcaaggtag 1719



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 85   ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 143
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2126 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2068
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>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2452

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 141/172 (81%), Gaps = 1/172 (0%)
 Strand = Plus / Minus

                                                                        
Query: 322  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 381
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1985 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1926

                                                                        
Query: 382  gagacctgcatgaagtcgctggatgccccagttgtcacgttgncttggccaaagatcacc 441
            || ||||||||||| ||  | ||||| ||||| ||||| ||  | |  ||||||||||||
Sbjct: 1925 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1866

                                                                
Query: 442  tcctcggnaaccctgccaccaagtgccacagtccatttggttctctaggtag 493
            ||||| | |||||| || |||||||| |||| ||||||| ||||| ||||||
Sbjct: 1865 tcctctgcaacccttccgccaagtgcaacag-ccatttgattctcaaggtag 1815



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 85   ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 143
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2222 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2164
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>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/
            ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete
            cds
          Length = 3058

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 165/205 (80%), Gaps = 1/205 (0%)
 Strand = Plus / Minus

                                                                        
Query: 289  cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 348
            ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 2059 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 2000

                                                                        
Query: 349  ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 408
            || ||||| ||||||||||| |  || || || || || |||||||| ||  | ||||| 
Sbjct: 1999 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 1940

                                                                        
Query: 409  ccagttgtcacgttgncttggccaaagatcacctcctcggnaaccctgccaccaagtgcc 468
            || |||||||| ||  | |  |||||||||||||| || | |||||| ||||||||||| 
Sbjct: 1939 ccggttgtcacattctcgtctccaaagatcacctcttctgcaacccttccaccaagtgca 1880

                                     
Query: 469  acagtccatttggttctctaggtag 493
            |||| ||||||||||||| ||||||
Sbjct: 1879 acag-ccatttggttctcaaggtag 1856
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>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds
          Length = 2311

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 165/205 (80%), Gaps = 1/205 (0%)
 Strand = Plus / Minus

                                                                        
Query: 289  cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 348
            ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 1985 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 1926

                                                                        
Query: 349  ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 408
            || ||||| ||||||||||| |  || || || || || |||||||| ||  | ||||| 
Sbjct: 1925 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 1866

                                                                        
Query: 409  ccagttgtcacgttgncttggccaaagatcacctcctcggnaaccctgccaccaagtgcc 468
            || |||||||| ||  | |  |||||||||||||| || | |||||| ||||||||||| 
Sbjct: 1865 ccggttgtcacattctcgtctccaaagatcacctcttctgcaacccttccaccaagtgca 1806

                                     
Query: 469  acagtccatttggttctctaggtag 493
            |||| ||||||||||||| ||||||
Sbjct: 1805 acag-ccatttggttctcaaggtag 1782
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>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial
          Length = 2190

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 118/145 (81%)
 Strand = Plus / Minus

                                                                        
Query: 322  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 381
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1685 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1626

                                                                        
Query: 382  gagacctgcatgaagtcgctggatgccccagttgtcacgttgncttggccaaagatcacc 441
            || ||||||||||| ||  | ||||| ||||| ||||| ||  | |  ||||||||||||
Sbjct: 1625 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1566

                                     
Query: 442  tcctcggnaaccctgccaccaagtg 466
            ||||| | |||||| || |||||||
Sbjct: 1565 tcctctgcaacccttccgccaagtg 1541
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>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete
             sequence
          Length = 100975

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 110/135 (81%)
 Strand = Plus / Minus

                                                                         
Query: 322   gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 381
             |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 62107 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 62048

                                                                         
Query: 382   gagacctgcatgaagtcgctggatgccccagttgtcacgttgncttggccaaagatcacc 441
             || ||||||||||| ||  | ||||| ||||| ||||| ||  | |  ||||||||||||
Sbjct: 62047 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 61988

                            
Query: 442   tcctcggnaaccctg 456
             ||||| | |||||||
Sbjct: 61987 tcctctgcaaccctg 61973



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 85    ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 143
             ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 62432 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 62374
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>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast
            gene for chloroplast product
          Length = 2352

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 340  ttgctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtc 398
            ||||||||||||||||| |||||||| ||||| || || ||||| || |||||||||||
Sbjct: 1893 ttgctgaacccaaatctctcaaccatctgtcttgccactcgtgaaacttgcatgaagtc 1835
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>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS28ZC04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2428

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 137/172 (79%), Gaps = 1/172 (0%)
 Strand = Plus / Minus

                                                                        
Query: 322  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 381
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || | ||| 
Sbjct: 2021 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccaaacga 1962

                                                                        
Query: 382  gagacctgcatgaagtcgctggatgccccagttgtcacgttgncttggccaaagatcacc 441
            || ||||||||||| ||  | ||||| ||||| ||||  ||  | |  ||||||||||||
Sbjct: 1961 gacacctgcatgaaatcatttgatgctccagtcgtcaaattctcatccccaaagatcacc 1902

                                                                
Query: 442  tcctcggnaaccctgccaccaagtgccacagtccatttggttctctaggtag 493
            ||||| | ||  || || |||||||| |||| ||||||| ||||| ||||||
Sbjct: 1901 tcctctgaaaaacttccgccaagtgcaacag-ccatttgattctcaaggtag 1851



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 85   ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 143
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2258 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2200
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>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14
          Length = 59762

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                         
Query: 289   cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 348
             ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 43337 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 43278

                                 
Query: 349   ccaaatctttcaaccatttg 368
             || ||||| |||||||||||
Sbjct: 43277 ccgaatctctcaaccatttg 43258



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Minus

                                                  
Query: 457   ccaccaagtgccacagtccatttggttctctaggtag 493
             ||||||||||| |||| ||||||||||||| ||||||
Sbjct: 43080 ccaccaagtgcaacag-ccatttggttctcaaggtag 43045
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>gb|BT016970.1| Zea mays clone E04912707E08.c mRNA sequence
          Length = 202

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 64  gcgacaaacagctccgcctgcccgtcgatgaa 95
           |||||||||||||| ||||| ||||| |||||
Sbjct: 162 gcgacaaacagctcggcctggccgtcaatgaa 193
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>gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete sequence
          Length = 189116

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 97     aggctcatgaactcctccccgtcc 120
              |||||||||||||||||| |||||
Sbjct: 125479 aggctcatgaactcctcctcgtcc 125502
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>gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 160
           of 256 of the complete sequence
          Length = 13735

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  cctgcccgtcgatgaagagg 99
           ||||||||||||||||||||
Sbjct: 470 cctgcccgtcgatgaagagg 489
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>gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosome 18, complete
             sequence
          Length = 213673

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    gaagaggctcatgaactcct 112
             ||||||||||||||||||||
Sbjct: 81922 gaagaggctcatgaactcct 81903
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>gb|AY094953.1| Drosophila melanogaster RH69586 full insert cDNA
          Length = 870

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 89  cgatgaagaggctcatgaactcctcccc 116
           |||||||||||||||| ||||| |||||
Sbjct: 656 cgatgaagaggctcataaactcttcccc 683
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>emb|AL096773.6|HS1000E10 Human DNA sequence from clone RP5-1000E10 on chromosome 1p12-13.3
             Contains the 5' end of the gene for a novel protein
             (FLJ37099), the AMPD1 gene for adenosine monophosphate
             deaminase 1 (isoform M), the NRAS gene for neuroblastoma
             RAS viral (v-ras) oncogene homolog, the gene for
             NRAS-related gene (D1S155E) and the gene for a novel
             protein (FLJ44339), complete sequence
          Length = 140207

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   aatctttcaaccatttgtct 371
             ||||||||||||||||||||
Sbjct: 62486 aatctttcaaccatttgtct 62505
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>emb|BX537714.1|HSM805789 Homo sapiens genomic DNA; cDNA DKFZp686B1162 (from clone
           DKFZp686B1162)
          Length = 5596

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 tgccaccaagtgccacagtc 474
           ||||||||||||||||||||
Sbjct: 648 tgccaccaagtgccacagtc 667
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>ref|NM_169826.1| Drosophila melanogaster CG31224-RA (CG31224), mRNA
          Length = 7059

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 97   aggctcatgaactcctccccgtcc 120
            |||||||||||||||||| |||||
Sbjct: 2447 aggctcatgaactcctcctcgtcc 2424
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>ref|NM_078959.3| Drosophila melanogaster Peroxiredoxin 2540 CG11765-RA (Prx2540-2),
           mRNA
          Length = 868

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 89  cgatgaagaggctcatgaactcctcccc 116
           |||||||||||||||| ||||| |||||
Sbjct: 657 cgatgaagaggctcataaactcttcccc 684
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 80      cctgcccgtcgatgaagagg 99
               ||||||||||||||||||||
Sbjct: 1766640 cctgcccgtcgatgaagagg 1766659
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>gb|AY075377.1| Drosophila melanogaster LD06123 full length cDNA
          Length = 3188

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 97   aggctcatgaactcctccccgtcc 120
            |||||||||||||||||| |||||
Sbjct: 2447 aggctcatgaactcctcctcgtcc 2424
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>gb|AY070952.1| Drosophila melanogaster RE05093 full length cDNA
          Length = 870

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 89  cgatgaagaggctcatgaactcctcccc 116
           |||||||||||||||| ||||| |||||
Sbjct: 655 cgatgaagaggctcataaactcttcccc 682
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>gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
             BACR20O22, complete sequence
          Length = 168567

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 89    cgatgaagaggctcatgaactcctcccc 116
             |||||||||||||||| ||||| |||||
Sbjct: 77043 cgatgaagaggctcataaactcttcccc 77070
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>gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, region 91C-91C, BAC clone
             BACR01F15, complete sequence
          Length = 186989

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    aggctcatgaactcctccccgtcc 120
             |||||||||||||||||| |||||
Sbjct: 35762 aggctcatgaactcctcctcgtcc 35785
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>gb|AC136290.2| Homo sapiens chromosome 3 clone CTD-2104B13, complete sequence
          Length = 136961

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 455   tgccaccaagtgccacagtc 474
             ||||||||||||||||||||
Sbjct: 43151 tgccaccaagtgccacagtc 43132
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>gb|BT003589.1| Drosophila melanogaster LD03662 full insert cDNA
          Length = 2508

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 97   aggctcatgaactcctccccgtcc 120
            |||||||||||||||||| |||||
Sbjct: 1241 aggctcatgaactcctcctcgtcc 1218
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>gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61 of 118 of the
             complete sequence
          Length = 255619

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    aggctcatgaactcctccccgtcc 120
             |||||||||||||||||| |||||
Sbjct: 48507 aggctcatgaactcctcctcgtcc 48530
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>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete
             sequence
          Length = 281782

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 89    cgatgaagaggctcatgaactcctcccc 116
             |||||||||||||||| ||||| |||||
Sbjct: 55947 cgatgaagaggctcataaactcttcccc 55974
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>dbj|AB100244.1| Penicillium camemberti pyrG gene for orotidine-5'-phosphate
            decarboxylase, complete cds
          Length = 2580

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 159  gaggatgtcgatgtgggtgttgat 182
            |||||||||||||||||| |||||
Sbjct: 1353 gaggatgtcgatgtgggttttgat 1330
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>dbj|AP006192.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-467K9, complete
            sequence
          Length = 140549

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 455  tgccaccaagtgccacagtc 474
            ||||||||||||||||||||
Sbjct: 2011 tgccaccaagtgccacagtc 2030
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>dbj|AP006190.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-145L6, complete
              sequence
          Length = 176082

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    tgccaccaagtgccacagtc 474
              ||||||||||||||||||||
Sbjct: 175461 tgccaccaagtgccacagtc 175480
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 255     catcgagtagtccttctggc 274
               ||||||||||||||||||||
Sbjct: 2170771 catcgagtagtccttctggc 2170790
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    catcgagtagtccttctggc 274
              ||||||||||||||||||||
Sbjct: 970532 catcgagtagtccttctggc 970551
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>dbj|AP000493.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:301 to 308,
             anti-oncogene region, section 1/5
          Length = 200000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   tgccaccaagtgccacagtc 474
             ||||||||||||||||||||
Sbjct: 61827 tgccaccaagtgccacagtc 61846


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,837,823
Number of Sequences: 3902068
Number of extensions: 2837823
Number of successful extensions: 51988
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51831
Number of HSP's gapped (non-prelim): 140
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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