ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal5k22 |
|---|---|
| Clone Library Name | barley_pub |
>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16| Length = 417 Score = 87.4 bits (215), Expect = 3e-17 Identities = 53/118 (44%), Positives = 69/118 (58%), Gaps = 14/118 (11%) Frame = -3 Query: 633 LGLKLDTDDVLKEWSGKGSMFAEGSGPDSS------------ESAAEVRAKLADID-LFP 493 L L+L+ D V+ W G+G ++ G P+ E+ E + + P Sbjct: 293 LMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLP 352 Query: 492 ENGSG-GIREARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLQQA 322 +G G G REARV RY+EKRR RLFSKKIRY+VRK+NA+ RPRMKGRFV+ SL A Sbjct: 353 SSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASLAAAA 410
>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7| Length = 392 Score = 84.0 bits (206), Expect = 4e-16 Identities = 53/120 (44%), Positives = 65/120 (54%), Gaps = 19/120 (15%) Frame = -3 Query: 633 LGLKLDTDDVLKEWSGKGSMFAEGSGPDS-------------------SESAAEVRAKLA 511 L L+LD V+ W GS + G P+ S + R + Sbjct: 277 LFLRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGR 336 Query: 510 DIDLFPENGSGGIREARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLL 331 D GS G REARV+RYKEKRR RLFSKKIRY+VRK+NA+ RPR+KGRFV+ SLL Sbjct: 337 D-----GGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTSLL 391
>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6| Length = 406 Score = 79.7 bits (195), Expect = 7e-15 Identities = 49/114 (42%), Positives = 63/114 (55%), Gaps = 14/114 (12%) Frame = -3 Query: 633 LGLKLDTDDVLKEWSGKGSMFAEGSGPD------------SSESAAEVRAK--LADIDLF 496 L L+LD + V+ W G+G + + ES AE + L Sbjct: 289 LMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLH 348 Query: 495 PENGSGGIREARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSL 334 + G REARV RY+EKRR RLFSKKIRY+VRK+NA+ RPRMKGRFV+ S+ Sbjct: 349 LGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSSI 402
>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8| Length = 313 Score = 79.0 bits (193), Expect = 1e-14 Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 4/73 (5%) Frame = -3 Query: 552 DSSESAAEVRAKLADIDLFP----ENGSGGIREARVMRYKEKRRNRLFSKKIRYQVRKVN 385 D ES +V+ + L P E REARV RY++KR+NRLF KKIRY+VRKVN Sbjct: 234 DKQESPRDVKNNTSSFQLVPPGIEEKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVN 293 Query: 384 ADCRPRMKGRFVR 346 AD RPRMKGRFVR Sbjct: 294 ADKRPRMKGRFVR 306
>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3| Length = 294 Score = 61.6 bits (148), Expect = 2e-09 Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 16/77 (20%) Frame = -3 Query: 528 VRAKLADIDLFPENG----------------SGGIREARVMRYKEKRRNRLFSKKIRYQV 397 V + D+ L PE+G S REARV+RY+EKR+NR F K IRY Sbjct: 194 VSTRTIDVPLVPESGGVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYAS 253 Query: 396 RKVNADCRPRMKGRFVR 346 RK A+ RPR+KGRF + Sbjct: 254 RKAYAEMRPRIKGRFAK 270
>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4| Length = 362 Score = 60.8 bits (146), Expect = 3e-09 Identities = 28/42 (66%), Positives = 33/42 (78%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVR 346 REARVMRY+EKR+NR F K IRY RK A+ RPR+KGRF + Sbjct: 295 REARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 336
>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5| Length = 355 Score = 59.7 bits (143), Expect = 7e-09 Identities = 27/42 (64%), Positives = 33/42 (78%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVR 346 REARV+RY+EKR+NR F K IRY RK A+ RPR+KGRF + Sbjct: 285 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAK 326
>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1| Length = 355 Score = 56.2 bits (134), Expect = 8e-08 Identities = 26/50 (52%), Positives = 36/50 (72%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLQQA 322 REARV+RY+EK++ R F K IRY RK A+ RPR+KGRF + + ++A Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEA 335
>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2| Length = 347 Score = 56.2 bits (134), Expect = 8e-08 Identities = 25/42 (59%), Positives = 32/42 (76%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVR 346 REARV+RY+EK++ R F K IRY RK A+ RPR+KGRF + Sbjct: 278 REARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
>PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95| (Pseudo-response regulator 95) (OsPRR95) Length = 623 Score = 55.8 bits (133), Expect = 1e-07 Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 4/76 (5%) Frame = -3 Query: 561 SGPDSSESAAEVRAKLADIDLFPENGSG----GIREARVMRYKEKRRNRLFSKKIRYQVR 394 SG S+ + A ++ PEN G REA + +++ KR++R F KK+RYQ R Sbjct: 540 SGSVCDSSSNHMIAPTESSNVVPENPDGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSR 599 Query: 393 KVNADCRPRMKGRFVR 346 K+ A+ RPR+KG+FVR Sbjct: 600 KLLAEQRPRVKGQFVR 615
>CONS_ARATH (Q39057) Zinc finger protein CONSTANS| Length = 373 Score = 55.5 bits (132), Expect = 1e-07 Identities = 25/42 (59%), Positives = 31/42 (73%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVR 346 REARV+RY+EKR+ R F K IRY RK A+ RPR+ GRF + Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAK 347
>APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9| (Pseudo-response regulator 9) Length = 468 Score = 53.9 bits (128), Expect = 4e-07 Identities = 24/43 (55%), Positives = 35/43 (81%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRS 343 REA +M+++ KR++R F KK+RYQ RK A+ RPR+KG+FVR+ Sbjct: 417 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRT 459
>APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7| (Pseudo-response regulator 7) Length = 727 Score = 53.5 bits (127), Expect = 5e-07 Identities = 28/73 (38%), Positives = 43/73 (58%) Frame = -3 Query: 564 GSGPDSSESAAEVRAKLADIDLFPENGSGGIREARVMRYKEKRRNRLFSKKIRYQVRKVN 385 G+G S + LAD + + REA + ++++KR+ R F KK+RYQ RK Sbjct: 644 GNGDGSGSGSGSGSGNLADENKISQ------REAALTKFRQKRKERCFRKKVRYQSRKKL 697 Query: 384 ADCRPRMKGRFVR 346 A+ RPR++G+FVR Sbjct: 698 AEQRPRVRGQFVR 710
>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9| Length = 372 Score = 52.8 bits (125), Expect = 9e-07 Identities = 24/43 (55%), Positives = 31/43 (72%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRS 343 R VMRYKEK++ R F K++RY RK AD R R+KGRFV++ Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKA 357
>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10| Length = 373 Score = 52.8 bits (125), Expect = 9e-07 Identities = 25/43 (58%), Positives = 31/43 (72%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRS 343 R VMRYKEK++ R F K++RY RK AD R R+KGRFV+S Sbjct: 316 RNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKS 358
>PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73| (Pseudo-response regulator 73) (OsPRR73) Length = 767 Score = 52.0 bits (123), Expect = 1e-06 Identities = 25/54 (46%), Positives = 38/54 (70%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLQQALEEE 310 REA + ++++KR+ R F KK+RYQ RK A+ RPR++G+FVR QA ++E Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQDE 765
>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11| Length = 330 Score = 51.6 bits (122), Expect = 2e-06 Identities = 23/44 (52%), Positives = 31/44 (70%) Frame = -3 Query: 474 IREARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRS 343 +R+ RYK+K+ R+F K+IRY RK AD R R+KGRFV+S Sbjct: 275 LRDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVKS 318
>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14| Length = 402 Score = 50.8 bits (120), Expect = 3e-06 Identities = 26/69 (37%), Positives = 41/69 (59%) Frame = -3 Query: 549 SSESAAEVRAKLADIDLFPENGSGGIREARVMRYKEKRRNRLFSKKIRYQVRKVNADCRP 370 S+ + V AD++ +N R+ + RYKEK++ R + K IRY+ RK A+ R Sbjct: 336 SNRATRLVAVTNADLEQMAQN-----RDNAMQRYKEKKKTRRYDKTIRYETRKARAETRL 390 Query: 369 RMKGRFVRS 343 R+KGRFV++ Sbjct: 391 RVKGRFVKA 399
>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15| Length = 433 Score = 50.1 bits (118), Expect = 6e-06 Identities = 26/60 (43%), Positives = 37/60 (61%) Frame = -3 Query: 522 AKLADIDLFPENGSGGIREARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRS 343 A AD++ +N R + RYKEKR+ R + K IRY+ RK AD R R++GRFV++ Sbjct: 373 ATKADLERLAQN-----RGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKA 427
>PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37| (Pseudo-response regulator 37) (OsPRR37) Length = 742 Score = 50.1 bits (118), Expect = 6e-06 Identities = 24/49 (48%), Positives = 35/49 (71%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLQQ 325 R A V+++++KR+ R F KK+RYQ RK A+ RPR++G+FVR QQ Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQDQQ 730
>APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5| (Pseudo-response regulator 5) Length = 558 Score = 49.3 bits (116), Expect = 1e-05 Identities = 21/42 (50%), Positives = 33/42 (78%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVR 346 REA + +++ KR++R + KK+RY+ RK A+ RPR+KG+FVR Sbjct: 509 REAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVR 550
>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12| Length = 337 Score = 49.3 bits (116), Expect = 1e-05 Identities = 23/43 (53%), Positives = 29/43 (67%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRS 343 R +RYKEK+ R F K+IRY RK AD R R+KGRFV++ Sbjct: 280 RNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKA 322
>APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3| (Pseudo-response regulator 3) Length = 495 Score = 48.9 bits (115), Expect = 1e-05 Identities = 21/42 (50%), Positives = 31/42 (73%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVR 346 REA +M+++ KR+ R F KK+RY RK A+ RP +KG+F+R Sbjct: 442 REAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIR 483
>APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1| (Pseudo-response regulator 1) (Timing of CAB expression 1) (ABI3-interacting protein 1) Length = 618 Score = 48.5 bits (114), Expect = 2e-05 Identities = 30/82 (36%), Positives = 42/82 (51%) Frame = -3 Query: 591 SGKGSMFAEGSGPDSSESAAEVRAKLADIDLFPENGSGGIREARVMRYKEKRRNRLFSKK 412 +G+ SM P + + EVR D RE +++++ KR R F KK Sbjct: 504 NGQMSMVHHSWSPAGNPPSNEVRVNKLDR-----------REEALLKFRRKRNQRCFDKK 552 Query: 411 IRYQVRKVNADCRPRMKGRFVR 346 IRY RK A+ RPR+KG+FVR Sbjct: 553 IRYVNRKRLAERRPRVKGQFVR 574
>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13| Length = 332 Score = 48.5 bits (114), Expect = 2e-05 Identities = 20/43 (46%), Positives = 32/43 (74%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRS 343 R + + RYKEK+++R + K IRY+ RKV A+ R R++GRF ++ Sbjct: 287 RNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKA 329
>PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1| (Pseudo-response regulator 1) (OsPRR1) Length = 518 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/42 (47%), Positives = 30/42 (71%) Frame = -3 Query: 471 REARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVR 346 R A + +++ KR+ R F KK+RY RK A+ RPR++G+FVR Sbjct: 443 RAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVR 484
>GAT25_ARATH (Q8H1G0) GATA transcription factor 25 (ZIM-like 2 protein)| Length = 302 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = -3 Query: 495 PENGSGGIREARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRSPS 337 P+ S R A ++R++EKR+ R F KKIRY VRK A R KG+F + S Sbjct: 139 PQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKS 191
>GAT27_ARATH (Q8GXL7) GATA transcription factor 27 (ZIM-like 1 protein)| Length = 297 Score = 40.0 bits (92), Expect = 0.006 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = -3 Query: 495 PENGSGGIREARVMRYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRSPS 337 P+ S R A ++R++EKR+ R F K IRY VRK A R KG+F + S Sbjct: 135 PQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKS 187
>GAT26_ARATH (Q9LRH6) GATA transcription factor 26 (ZIM protein)| Length = 309 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -3 Query: 453 RYKEKRRNRLFSKKIRYQVRKVNADCRPRMKGRFVRS 343 R+++KR R F KK+RY VR+ A R KG+F S Sbjct: 152 RFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSS 188
>RARA_FUGRU (Q9W5Z3) Retinoic acid receptor alpha (RAR-alpha)| Length = 447 Score = 31.6 bits (70), Expect = 2.1 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Frame = +3 Query: 216 LTEVSELTGEAKKGQKEVSI*RLARSITISSSLPPGLAAEEMGS*QTFPSSEAGSRRSPS 395 L ++++L + KG + V + + I S+PP L E + + + S GSR S + Sbjct: 370 LMKITDLRSISAKGAERV----ITLKMEIPGSMPP-LIQEMLENSEGLESGATGSRPSGA 424 Query: 396 APGTGSSSKRAGCA-ASPCTSSP 461 PG+ S S A +SP T SP Sbjct: 425 PPGSCSPSLSPSSAQSSPPTQSP 447
>CDYL2_HUMAN (Q8N8U2) Chromodomain Y-like protein 2 (CDY-like 2)| Length = 506 Score = 31.2 bits (69), Expect = 2.7 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 12/81 (14%) Frame = -3 Query: 573 FAEGS---GPDSSESAAEVRAKLADID--LFPENG------SGGIR-EARVMRYKEKRRN 430 F GS G D ++ E D+D ENG +GG+ + V R E ++ Sbjct: 170 FGNGSHQPGLDLNDHVGEQDMGECDVDHATLAENGLGSALTNGGLNLHSPVKRKLEAEKD 229 Query: 429 RLFSKKIRYQVRKVNADCRPR 367 +F K++RY VR+ ++CR R Sbjct: 230 YVFDKRLRYSVRQNESNCRFR 250
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 31.2 bits (69), Expect = 2.7 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +2 Query: 491 SGNKSMSASLARTSAADSDESGPLPSANIDPL 586 S S S+S + S+ D+DE GP+PS N P+ Sbjct: 1215 SSLSSSSSSSSAASSLDADEDGPMPSRNRPPI 1246
>ADML_PIG (P53366) ADM precursor [Contains: Adrenomedullin (AM);| Proadrenomedullin N-20 terminal peptide (ProAM-N20) (ProAM N-terminal 20 peptide) (PAMP)] Length = 188 Score = 30.8 bits (68), Expect = 3.5 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = +3 Query: 231 ELTGEAKKGQKEVSI*RLARSITISSSLPPGLAAEEMGS*QTF--PSSEAGSRRSPSA 398 ++ E +K + ++ R R + +SSS P G+A + G QT P GS RSP A Sbjct: 25 DVAAEFRKKWNKWALSRGKRELRLSSSYPTGIADLKAGPAQTVIRPQDVKGSSRSPQA 82
>XKR5_PANTR (Q49LS3) XK-related protein 5| Length = 686 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/82 (23%), Positives = 38/82 (46%) Frame = +3 Query: 225 VSELTGEAKKGQKEVSI*RLARSITISSSLPPGLAAEEMGS*QTFPSSEAGSRRSPSAPG 404 VS G+ GQ+ + + ++ S++ ++++ GS T ++ +G R S+P Sbjct: 519 VSGTQGKGTGGQQRGGEGQQSSTLYFSATAEVATSSQQEGSPATLQTAHSGRRLGKSSPA 578 Query: 405 TGSSSKRAGCAASPCTSSPLLP 470 +S G A P T + + P Sbjct: 579 QPASPHPVGLAPFPATMADISP 600
>SERC_HAEIN (P44336) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)| Length = 362 Score = 30.8 bits (68), Expect = 3.5 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +1 Query: 472 DATRPVLRKQVDVCKFGPHFGGRLRRIGPAAL 567 D + +L +Q+D+ KFG + G + +GPA + Sbjct: 172 DMSSNILSRQIDISKFGVIYAGAQKNLGPAGI 203
>PCDAB_PANTR (Q5DRF3) Protocadherin alpha 11 precursor (PCDH-alpha11)| Length = 949 Score = 30.8 bits (68), Expect = 3.5 Identities = 20/50 (40%), Positives = 25/50 (50%) Frame = +3 Query: 294 ITISSSLPPGLAAEEMGS*QTFPSSEAGSRRSPSAPGTGSSSKRAGCAAS 443 + S SLP GL EE G Q S+ G R P+ S+S RAG +S Sbjct: 769 MAFSPSLPLGLNKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSS 818
>PCDAB_HUMAN (Q9Y5I1) Protocadherin alpha 11 precursor (PCDH-alpha11)| Length = 949 Score = 30.8 bits (68), Expect = 3.5 Identities = 20/50 (40%), Positives = 25/50 (50%) Frame = +3 Query: 294 ITISSSLPPGLAAEEMGS*QTFPSSEAGSRRSPSAPGTGSSSKRAGCAAS 443 + S SLP GL EE G Q S+ G R P+ S+S RAG +S Sbjct: 769 MAFSPSLPLGLNKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSS 818
>ALGX_PSEFL (P59788) Alginate biosynthesis protein algX precursor| Length = 485 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = -3 Query: 624 KLDTDDVLKEWSGKGSMFAEGSGPDSSESAAEVRAKLADIDLFPENG 484 +L TD+ +W+ + + E GP++ +A +V AK+ ++FP G Sbjct: 434 ELRTDE---DWASQNLLAVEVQGPEAGAAAQKVEAKICTRNVFPAGG 477
>SERC_VIBF1 (Q5E6F2) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)| Length = 360 Score = 30.4 bits (67), Expect = 4.6 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 472 DATRPVLRKQVDVCKFGPHFGGRLRRIGPAAL 567 D + +L +++DV K+G + G + IGPA L Sbjct: 172 DMSSTILSRKIDVSKYGVIYAGAQKNIGPAGL 203
>SERC_VIBCH (Q9KSU7) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)| Length = 364 Score = 30.0 bits (66), Expect = 6.0 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +1 Query: 472 DATRPVLRKQVDVCKFGPHFGGRLRRIGPAAL 567 D + +L +++DV K+G + G + IGPA + Sbjct: 176 DMSSTILSREIDVSKYGVIYAGAQKNIGPAGI 207
>AAKG3_HUMAN (Q9UGI9) 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK| gamma-3 chain) (AMPK gamma3) Length = 489 Score = 30.0 bits (66), Expect = 6.0 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Frame = +3 Query: 237 TGEAKKGQKEVSI*RLARSITISSSLPPGL--------AAEEMGS*QTFPSSEAGSRRSP 392 + E +G++ R R ++ PPG AAE G TFP + ++ P Sbjct: 45 SSERIRGKRRAKALRWTRQKSVEEGEPPGQGEGPRSRPAAESTGLEATFPKTTPLAQADP 104 Query: 393 SAPGTGSSSKRAGCAASPCTSS 458 + G G+ C S CT+S Sbjct: 105 A--GVGTPPTGWDCLPSDCTAS 124
>Y215_ADE02 (P03291) Hypothetical protein F-215| Length = 215 Score = 30.0 bits (66), Expect = 6.0 Identities = 20/64 (31%), Positives = 29/64 (45%) Frame = +3 Query: 279 RLARSITISSSLPPGLAAEEMGS*QTFPSSEAGSRRSPSAPGTGSSSKRAGCAASPCTSS 458 +L S ++S S PG ++ G+ F S A S RSP+ +SS PC S Sbjct: 77 KLILSNSLSGSSSPGPSSSRRGA--RFRRSTAASSRSPATSARSTSSCPRAAPTCPCPLS 134 Query: 459 PLLP 470 +P Sbjct: 135 RRVP 138
>CYSA_STRCO (Q59829) Putative cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 392 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +3 Query: 354 TFPSSEAGSRRSPSAPGTGSSSKRAGCAASPCTSSPLLP 470 T S+ G RS SAPG G+ + RAG P P LP Sbjct: 6 TTDSAGTGGERSASAPGDGTRAVRAG-LPEPVKHEPTLP 43
>TSYL3_HUMAN (Q9H489) Testis-specific Y-encoded-like protein 3 (TSPY-like 3)| Length = 355 Score = 29.6 bits (65), Expect = 7.9 Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Frame = +3 Query: 315 PPGLAAEEMGS*QTFPSSEA------GSRRSPSAPGTGSSSKRAGCAASPCTSSPL 464 PPGLA E G +T P++ A GS + PGT S G AAS T+ L Sbjct: 16 PPGLARE--GDARTVPAARAREAGGRGSLHPAAGPGTAFPSPGRGEAASTATTPSL 69
>DSBD_VIBCH (Q9KNN1) Thiol:disulfide interchange protein dsbD precursor (EC| 1.8.1.8) (Protein-disulfide reductase) (Disulfide reductase) Length = 600 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +3 Query: 351 QTFPSSEAGSRRSPSAPGTGSSSKRAGCAASPCTSSPL 464 QT+ +S + +++ S PG + +G SPCT++PL Sbjct: 303 QTWLNSLSNAQQGGSLPGVFAMGAISGLVCSPCTTAPL 340
>ADML_CANFA (O77559) ADM precursor [Contains: Adrenomedullin (AM);| Proadrenomedullin N-20 terminal peptide (ProAM-N20) (ProAM N-terminal 20 peptide) (PAMP)] Length = 188 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = +3 Query: 231 ELTGEAKKGQKEVSI*RLARSITISSSLPPGLAAEEMGS*QTFPSSE--AGSRRSPSAPG 404 ++ E +K + ++ R R + +SSS P GLA + G QT ++ G+ R+P G Sbjct: 25 DVASEFRKKWNKWAVSRGKRELRVSSSYPTGLAEVKAGPAQTLIRTQDVKGASRNPQTSG 84 Query: 405 TGSSSKR 425 ++ R Sbjct: 85 PDAARIR 91
>SSH3_HUMAN (Q8TE77) Protein phosphatase Slingshot homolog 3 (EC 3.1.3.48) (EC| 3.1.3.16) (SSH-3L) (hSSH-3L) Length = 659 Score = 29.6 bits (65), Expect = 7.9 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +2 Query: 473 MPPDPFSGNKSMSASLARTSAADSDESGPLPSANI 577 +PP+P G + + + AA +E GP P N+ Sbjct: 500 LPPEPEGGGEEKVVGMEESQAAPKEEPGPRPRINL 534
>SERC_PHOPR (Q6LPD9) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)| Length = 360 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +1 Query: 472 DATRPVLRKQVDVCKFGPHFGGRLRRIGPAAL 567 D + +L + +DV K+G + G + IGPA L Sbjct: 172 DLSSTILSRPIDVSKYGVIYAGAQKNIGPAGL 203
>PXDC1_MOUSE (Q91ZV7) Plexin domain-containing protein 1 precursor (Tumor| endothelial marker 7) Length = 500 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +2 Query: 485 PFSGNKSMSASLARTSAADSDESGPLPSANIDPLPDH 595 PF+G+ + S+SL S D++ P A D LPDH Sbjct: 376 PFNGDSTTSSSLFIDSLTTEDDTKLNPYAEGDGLPDH 412 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,233,605 Number of Sequences: 219361 Number of extensions: 1499061 Number of successful extensions: 5602 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 5014 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5566 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
