| Clone Name | rbaal5k06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479247.1| Oryza sativa (japonica cultivar-group), mRNA Length = 171 Score = 268 bits (135), Expect = 2e-68 Identities = 147/151 (97%) Strand = Plus / Minus Query: 234 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 293 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 171 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 112 Query: 294 cagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcgg 353 ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 111 cagcaagcagatccagaactcaatcccgcagccgaacttgaagaagacgccgagcggcgg 52 Query: 354 caggatgatggcgaggatgatgtcgatgcag 384 ||||||||||||||||||||||||||||||| Sbjct: 51 caggatgatggcgaggatgatgtcgatgcag 21
>gb|AY554050.1| Oryza sativa (japonica cultivar-group) drought-induced hydrophobic protein (DRR1) mRNA, complete cds Length = 571 Score = 268 bits (135), Expect = 2e-68 Identities = 147/151 (97%) Strand = Plus / Minus Query: 234 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 293 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 273 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 214 Query: 294 cagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcgg 353 ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 213 cagcaagcagatccagaactcaatcccgcagccgaacttgaagaagacgccgagcggcgg 154 Query: 354 caggatgatggcgaggatgatgtcgatgcag 384 ||||||||||||||||||||||||||||||| Sbjct: 153 caggatgatggcgaggatgatgtcgatgcag 123
>dbj|AK121089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065L15, full insert sequence Length = 636 Score = 268 bits (135), Expect = 2e-68 Identities = 147/151 (97%) Strand = Plus / Minus Query: 234 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 293 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 298 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 239 Query: 294 cagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcgg 353 ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 238 cagcaagcagatccagaactcaatcccgcagccgaacttgaagaagacgccgagcggcgg 179 Query: 354 caggatgatggcgaggatgatgtcgatgcag 384 ||||||||||||||||||||||||||||||| Sbjct: 178 caggatgatggcgaggatgatgtcgatgcag 148
>gb|AY607689.1| Oryza sativa (japonica cultivar-group) low temperature-induced low molecular weight integral membrane protein LTI6a mRNA, complete cds Length = 616 Score = 268 bits (135), Expect = 2e-68 Identities = 147/151 (97%) Strand = Plus / Minus Query: 234 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 293 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 283 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 224 Query: 294 cagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcgg 353 ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 223 cagcaagcagatccagaactcaatcccgcagccgaacttgaagaagacgccgagcggcgg 164 Query: 354 caggatgatggcgaggatgatgtcgatgcag 384 ||||||||||||||||||||||||||||||| Sbjct: 163 caggatgatggcgaggatgatgtcgatgcag 133
>gb|AY823549.1| Pennisetum glaucum low temperature and salt responsive protein mRNA, complete cds Length = 565 Score = 244 bits (123), Expect = 2e-61 Identities = 150/159 (94%) Strand = Plus / Minus Query: 234 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 293 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 ctacttggtgatggcccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 249 Query: 294 cagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcgg 353 | ||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||| Sbjct: 248 gacgaggcagatccagaactcaaccccgcagccgaacttgaagaagaccccgagcggcgg 189 Query: 354 caggatgatggcgaggatgatgtcgatgcagttggccgt 392 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 188 caggatgatggcgaggatgatgtcgatgcagttcgccgt 150
>gb|AY103848.1| Zea mays PCO061754 mRNA sequence Length = 846 Score = 234 bits (118), Expect = 2e-58 Identities = 145/154 (94%) Strand = Plus / Minus Query: 231 cggctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggt 290 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 312 cggctacttggtgatggcccagacggcgtagatgatgccggggaggtagccgaggaaggt 253 Query: 291 gagcagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcgg 350 ||| | ||||||||||||||||| | ||||||| |||||||||||||||| |||||||| Sbjct: 252 gaggataaggcagatccagaactcaaccccgcagccgaacttgaagaagaccccgagcgg 193 Query: 351 cggcaggatgatggcgaggatgatgtcgatgcag 384 |||||||||||||||||||||||||||||||||| Sbjct: 192 cggcaggatgatggcgaggatgatgtcgatgcag 159
>gb|AY554051.1| Oryza sativa (japonica cultivar-group) drought-induced hydrophobic protein (DRR2) mRNA, complete cds Length = 547 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 235 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 294 |||||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 287 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 228 Query: 295 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 354 | |||||||||||||||||| |||||| ||||||||| |||||||||||| ||||| Sbjct: 227 aacaggcagatccagaactcatgcccgcatccgaacttgaggaagacgccgaggggcggg 168 Query: 355 aggatgatggcgaggatgatgtcgatgcagttggccgt 392 ||||||||||||| || ||||||||||||||| ||||| Sbjct: 167 aggatgatggcgatgaggatgtcgatgcagttcgccgt 130
>gb|AF503583.2| Oryza sativa (indica cultivar-group) early drought induced protein (R1G1B) mRNA, complete cds Length = 649 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 235 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 294 |||||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 312 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 253 Query: 295 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 354 | |||||||||||||||||| |||||| ||||||||| |||||||||||| ||||| Sbjct: 252 aacaggcagatccagaactcatgcccgcatccgaacttgaggaagacgccgaggggcggg 193 Query: 355 aggatgatggcgaggatgatgtcgatgcagttggccgt 392 ||||||||||||| || ||||||||||||||| ||||| Sbjct: 192 aggatgatggcgatgaggatgtcgatgcagttcgccgt 155
>dbj|AK119249.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G07, full insert sequence Length = 622 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 235 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 294 |||||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 315 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 256 Query: 295 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 354 | |||||||||||||||||| |||||| ||||||||| |||||||||||| ||||| Sbjct: 255 aacaggcagatccagaactcatgcccgcatccgaacttgaggaagacgccgaggggcggg 196 Query: 355 aggatgatggcgaggatgatgtcgatgcagttggccgt 392 ||||||||||||| || ||||||||||||||| ||||| Sbjct: 195 aggatgatggcgatgaggatgtcgatgcagttcgccgt 158
>gb|AY607690.1| Oryza sativa (japonica cultivar-group) low temperature-induced low molecular weight integral membrane protein LTI6b mRNA, complete cds Length = 630 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 235 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 294 |||||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 294 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 235 Query: 295 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 354 | |||||||||||||||||| |||||| ||||||||| |||||||||||| ||||| Sbjct: 234 aacaggcagatccagaactcatgcccgcatccgaacttgaggaagacgccgaggggcggg 175 Query: 355 aggatgatggcgaggatgatgtcgatgcagttggccgt 392 ||||||||||||| || ||||||||||||||| ||||| Sbjct: 174 aggatgatggcgatgaggatgtcgatgcagttcgccgt 137
>dbj|AB161676.1| Leymus chinensis AcPMP3-1 mRNA for plasma membrane protein 3, complete cds Length = 579 Score = 163 bits (82), Expect = 7e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 235 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 294 |||||||||||| | ||| ||||||||||| || |||| ||| |||| |||||||||| Sbjct: 242 tacttggtgatggcgtagatagcgtagatgatacccgggatgtacccgaggaaggtgagc 183 Query: 295 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 354 | ||||||||||||||||| ||||||| ||||||||| |||||||||||| ||||| Sbjct: 182 aagaggcagatccagaactcatgcccgcagccgaacttgaggaagacgccgaggggcggg 123 Query: 355 aggatgatggcgaggatgatgtcgatgcagttggccgt 392 |||||||||||||||||||||||||||||||||||||| Sbjct: 122 aggatgatggcgaggatgatgtcgatgcagttggccgt 85
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 145 bits (73), Expect = 2e-31 Identities = 79/81 (97%) Strand = Plus / Minus Query: 234 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 293 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 26350505 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 26350446 Query: 294 cagcaggcagatccagaactc 314 ||||| ||||||||||||||| Sbjct: 26350445 cagcaagcagatccagaactc 26350425 Score = 125 bits (63), Expect = 1e-25 Identities = 66/67 (98%) Strand = Plus / Minus Query: 318 cccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtc 377 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26350306 cccgcagccgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtc 26350247 Query: 378 gatgcag 384 ||||||| Sbjct: 26350246 gatgcag 26350240
>dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_D11 Length = 109399 Score = 145 bits (73), Expect = 2e-31 Identities = 79/81 (97%) Strand = Plus / Minus Query: 234 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 293 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4745 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 4686 Query: 294 cagcaggcagatccagaactc 314 ||||| ||||||||||||||| Sbjct: 4685 cagcaagcagatccagaactc 4665 Score = 125 bits (63), Expect = 1e-25 Identities = 66/67 (98%) Strand = Plus / Minus Query: 318 cccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtc 377 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4546 cccgcagccgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtc 4487 Query: 378 gatgcag 384 ||||||| Sbjct: 4486 gatgcag 4480
>gb|AY105302.1| Zea mays PCO074610 mRNA sequence Length = 553 Score = 141 bits (71), Expect = 3e-30 Identities = 125/143 (87%) Strand = Plus / Minus Query: 256 gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactcg 315 ||||||||||| |||||||| ||| ||| |||||||||||| ||||||| |||||| ||| Sbjct: 214 gcgtagatgatcccggggagataggcgaggaaggtgagcaggaggcagagccagaattcg 155 Query: 316 atcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatg 375 | | |||| ||||||||| |||||||||||| ||||| ||||||||||||| || |||| Sbjct: 154 accttgcagccgaacttgaggaagacgccgagaggcgggaggatgatggcgatgaggatg 95 Query: 376 tcgatgcagttggccgtcccctc 398 ||||||||||| ||||| ||||| Sbjct: 94 tcgatgcagttcgccgtgccctc 72
>ref|NM_184595.1| Oryza sativa (japonica cultivar-group), mRNA Length = 195 Score = 137 bits (69), Expect = 4e-29 Identities = 108/121 (89%) Strand = Plus / Minus Query: 247 acccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatc 306 |||||||||||||||||||| || |||| |||||| ||||| ||||||| ||||||||| Sbjct: 179 acccagacggcgtagatgatccccgggaagtagcccaagaatgtgagcaagaggcagatc 120 Query: 307 cagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcg 366 |||||||||||| ||||| ||| ||||| |||||||||||| || ||||||||||||||| Sbjct: 119 cagaactcgatctcgcagccgaccttgaggaagacgccgaggggaggcaggatgatggcg 60 Query: 367 a 367 | Sbjct: 59 a 59
>ref|NM_183567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1614 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 |||| ||||||||||| || ||||| |||||||||||||||||||| || |||| ||||| Sbjct: 154 agaccgcgtagatgatccccgggagatagccgaagaaggtgagcagaagacagagccaga 95 Query: 311 actcgatcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcgagga 370 |||| | | ||| ||||||||| |||||||||||| || || ||||||||||||| || Sbjct: 94 actccaccttgcatccgaacttgaggaagacgccgagaggagggaggatgatggcgatga 35 Query: 371 tgatgtcgatgcagttggccgt 392 ||||||||||||||||||||| Sbjct: 34 ggatgtcgatgcagttggccgt 13
>dbj|AB161677.1| Leymus chinensis AcPMP3-2 mRNA for plasma membrane protein 3, complete cds Length = 513 Score = 117 bits (59), Expect = 4e-23 Identities = 131/155 (84%) Strand = Plus / Minus Query: 235 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 294 |||||||||||| | ||| |||||||| || || |||| | | |||| |||||||||| Sbjct: 245 tacttggtgatggcgtagatagcgtagataatacccgggatgaacccgaggaaggtgagc 186 Query: 295 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 354 | ||||||||||||||||| |||||| ||||||||| |||||||||||| ||||| Sbjct: 185 aagaggcagatccagaactcatgcccgcatccgaacttgaggaagacgccgaggggcggg 126 Query: 355 aggatgatggcgaggatgatgtcgatgcagttggc 389 ||||||||||||| |||||||||||||||| |||| Sbjct: 125 aggatgatggcgatgatgatgtcgatgcaggtggc 91
>gb|BT017793.1| Zea mays clone EL01N0504G08.c mRNA sequence Length = 472 Score = 111 bits (56), Expect = 2e-21 Identities = 122/144 (84%) Strand = Plus / Minus Query: 255 ggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 314 |||||| ||||||||||||| |||||||| ||||||||| || ||||||||||||||||| Sbjct: 233 ggcgtaaatgatgccggggatgtagccgaggaaggtgaggaggaggcagatccagaactc 174 Query: 315 gatcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgat 374 | ||||| || |||||| ||| || || ||||| |||||||||||||||| | ||| Sbjct: 173 gtggccgcacccgtacttgaggaacacccccagcggaggcaggatgatggcgatcaggat 114 Query: 375 gtcgatgcagttggccgtcccctc 398 ||| | ||||||||| |||||||| Sbjct: 113 gtccacgcagttggcagtcccctc 90
>gb|AY111401.1| Zea mays CL37957_1 mRNA sequence Length = 478 Score = 109 bits (55), Expect = 9e-21 Identities = 134/162 (82%) Strand = Plus / Plus Query: 237 cttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcag 296 |||||||||| | ||| |||||||||||||||||||| |||||||| ||||||||| || Sbjct: 234 cttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgaggag 293 Query: 297 caggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggcag 356 |||||||||||||||||| ||||| || |||||| ||| | ||||| ||||| Sbjct: 294 gaggcagatccagaactcgtggccgcacccgtacttgaggaacannnnnagcggaggcag 353 Query: 357 gatgatggcgaggatgatgtcgatgcagttggccgtcccctc 398 ||||||||||| | |||||| | ||||||||| |||||||| Sbjct: 354 gatgatggcgatcaggatgtccacgcagttggcagtcccctc 395
>gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0069I13, complete sequence Length = 94252 Score = 103 bits (52), Expect = 5e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 235 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 294 |||||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 29011 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 29070 Query: 295 agcaggcagatccagaactc 314 | |||||||||||||||||| Sbjct: 29071 aacaggcagatccagaactc 29090 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 326 cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 385 ||||||||| |||||||||||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 29218 cgaacttgaggaagacgccgaggggcgggaggatgatggcgatgaggatgtcgatgcagt 29277 Query: 386 tggccgt 392 | ||||| Sbjct: 29278 tcgccgt 29284
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 103 bits (52), Expect = 5e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 235 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 294 |||||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 2159782 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 2159841 Query: 295 agcaggcagatccagaactc 314 | |||||||||||||||||| Sbjct: 2159842 aacaggcagatccagaactc 2159861 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 326 cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 385 ||||||||| |||||||||||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 2159989 cgaacttgaggaagacgccgaggggcgggaggatgatggcgatgaggatgtcgatgcagt 2160048 Query: 386 tggccgt 392 | ||||| Sbjct: 2160049 tcgccgt 2160055 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 256 gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 314 ||||||||||||||||| | ||| || | || ||||||||||||| |||||||||||| Sbjct: 1186261 gcgtagatgatgccgggtaagtatcccaggatggtgagcagcagggcgatccagaactc 1186319 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 336 gaagacgccgagcggcggcaggatgatggc 365 ||||||||||||||||||||| | |||||| Sbjct: 1186413 gaagacgccgagcggcggcagcaggatggc 1186442
>dbj|AK070577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057O07, full insert sequence Length = 1507 Score = 103 bits (52), Expect = 5e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 235 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 294 |||||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 437 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 378 Query: 295 agcaggcagatccagaactc 314 | |||||||||||||||||| Sbjct: 377 aacaggcagatccagaactc 358 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 326 cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 385 ||||||||| |||||||||||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 230 cgaacttgaggaagacgccgaggggcgggaggatgatggcgatgaggatgtcgatgcagt 171 Query: 386 tggccgt 392 | ||||| Sbjct: 170 tcgccgt 164
>dbj|AK099873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G21, full insert sequence Length = 1039 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 235 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 294 |||||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 440 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 381 Query: 295 agcaggcagatccagaactc 314 | || ||||||||||||||| Sbjct: 380 aacaagcagatccagaactc 361 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 326 cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 385 ||||||||| |||||||||||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 233 cgaacttgaggaagacgccgaggggcgggaggatgatggcgatgaggatgtcgatgcagt 174 Query: 386 tggccgt 392 | ||||| Sbjct: 173 tcgccgt 167
>gb|DQ078765.1| Zea mays clone Zmcoi6.8 cold-inducible unknown mRNA Length = 220 Score = 93.7 bits (47), Expect = 5e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 237 cttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcag 296 |||||||||| | ||| |||||||||||||||||||| |||||||| ||||||||| || Sbjct: 92 cttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgaggag 33 Query: 297 caggcagatccagaactcg 315 |||||||||||||||||| Sbjct: 32 gaggcagatccagaactcg 14
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 247 acccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatc 306 |||||||||||||||||||| || |||| |||||| ||||| ||||||| ||||||||| Sbjct: 14387399 acccagacggcgtagatgatccccgggaagtagcccaagaatgtgagcaagaggcagatc 14387458 Query: 307 cagaactcgatc 318 |||||||||||| Sbjct: 14387459 cagaactcgatc 14387470 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 320 cgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcga 367 ||||| ||| ||||| |||||||||||| || |||||||||||||||| Sbjct: 14387603 cgcagccgaccttgaggaagacgccgaggggaggcaggatgatggcga 14387650 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 336 gaagacgccgagcggcggcaggatgatggcgagga 370 ||||||||||| ||||||||||| |||||| |||| Sbjct: 9872215 gaagacgccgaccggcggcaggaagatggctagga 9872249
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 247 acccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatc 306 |||||||||||||||||||| || |||| |||||| ||||| ||||||| ||||||||| Sbjct: 136628 acccagacggcgtagatgatccccgggaagtagcccaagaatgtgagcaagaggcagatc 136687 Query: 307 cagaactcgatc 318 |||||||||||| Sbjct: 136688 cagaactcgatc 136699 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 320 cgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcga 367 ||||| ||| ||||| |||||||||||| || |||||||||||||||| Sbjct: 136832 cgcagccgaccttgaggaagacgccgaggggaggcaggatgatggcga 136879
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 247 acccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatc 306 |||||||||||||||||||| || |||| |||||| ||||| ||||||| ||||||||| Sbjct: 14382374 acccagacggcgtagatgatccccgggaagtagcccaagaatgtgagcaagaggcagatc 14382433 Query: 307 cagaactcgatc 318 |||||||||||| Sbjct: 14382434 cagaactcgatc 14382445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 320 cgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcga 367 ||||| ||| ||||| |||||||||||| || |||||||||||||||| Sbjct: 14382578 cgcagccgaccttgaggaagacgccgaggggaggcaggatgatggcga 14382625 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 336 gaagacgccgagcggcggcaggatgatggcgagga 370 ||||||||||| ||||||||||| |||||| |||| Sbjct: 9870336 gaagacgccgaccggcggcaggaagatggctagga 9870370
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 326 cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 385 ||||||||| |||||||||||| || || ||||||||||||| || |||||||||||||| Sbjct: 10331710 cgaacttgaggaagacgccgagaggagggaggatgatggcgatgaggatgtcgatgcagt 10331651 Query: 386 tggccgt 392 ||||||| Sbjct: 10331650 tggccgt 10331644 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 234 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 293 |||||||||||| | |||| ||||||||||| || ||||| ||||||||||||||||| Sbjct: 10331955 ctacttggtgatagcatagaccgcgtagatgatccccgggagatagccgaagaaggtgag 10331896 Query: 294 cagcaggcagatccagaactc 314 ||| || |||| ||||||||| Sbjct: 10331895 cagaagacagagccagaactc 10331875 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 255 ggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 314 ||||||||||||||| || || ||||||| | ||||||| || ||||||||||||||||| Sbjct: 10317926 ggcgtagatgatgcccggaagatagccgaggcaggtgaggagaaggcagatccagaactc 10317867
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 326 cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 385 ||||||||| |||||||||||| || || ||||||||||||| || |||||||||||||| Sbjct: 38430 cgaacttgaggaagacgccgagaggagggaggatgatggcgatgaggatgtcgatgcagt 38371 Query: 386 tggccgt 392 ||||||| Sbjct: 38370 tggccgt 38364 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 234 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 293 |||||||||||| | |||| ||||||||||| || ||||| ||||||||||||||||| Sbjct: 38675 ctacttggtgatagcatagaccgcgtagatgatccccgggagatagccgaagaaggtgag 38616 Query: 294 cagcaggcagatccagaactc 314 ||| || |||| ||||||||| Sbjct: 38615 cagaagacagagccagaactc 38595 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 255 ggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 314 ||||||||||||||| || || ||||||| | ||||||| || ||||||||||||||||| Sbjct: 24646 ggcgtagatgatgcccggaagatagccgaggcaggtgaggagaaggcagatccagaactc 24587
>gb|AY177890.1| Zea mays clone BAC ZMBBb_95H21 ABA-induced gene, partial sequence Length = 2248 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 ||||||||||||||||||| |||| ||| || | || ||||||||||||||||||||||| Sbjct: 1235 agacggcgtagatgatgcccgggatgtatcccaggatggtgagcagcaggcagatccaga 1176 Query: 311 actc 314 |||| Sbjct: 1175 actc 1172
>gb|AY107179.1| Zea mays PCO146860 mRNA sequence Length = 698 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 ||||||||||||||||||| |||| ||| || | || ||||||||||||||||||||||| Sbjct: 302 agacggcgtagatgatgcccgggatgtatcccaggatggtgagcagcaggcagatccaga 243 Query: 311 actc 314 |||| Sbjct: 242 actc 239
>gb|AY131234.1| Triticum aestivum putative low temperature and salt responsive protein mRNA, partial cds Length = 207 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 254 cggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaact 313 ||||||||| || ||||||||||||||||| || ||||||||||| || ||||||||||| Sbjct: 139 cggcgtagaggacgccggggaggtagccgaggatggtgagcagcacgctgatccagaact 80 Query: 314 c 314 | Sbjct: 79 c 79
>dbj|AK058343.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D10, full insert sequence Length = 590 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 234 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 293 |||||||||||| | |||| ||||||||||| || ||||| ||||||||||||||||| Sbjct: 94 ctacttggtgatagcatagaccgcgtagatgatccccgggagatagccgaagaaggtgag 35 Query: 294 cagcaggcagatccagaactc 314 ||| || |||| ||||||||| Sbjct: 34 cagaagacagagccagaactc 14
>gb|BT019258.1| Zea mays clone Contig931.F mRNA sequence Length = 610 Score = 65.9 bits (33), Expect = 1e-07 Identities = 95/115 (82%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 256 gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactcg 315 ||||||||||| ||||||| |||||| | || ||||||||||||||||| |||||||| Sbjct: 288 gcgtagatgattccggggacgtagccaaggattgtgagcagcaggcagatgcagaactct 347 Query: 316 a---tcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcga 367 | | | |||| |||| || |||||||||||| ||||| ||||||||||||| Sbjct: 348 attctgcagcagccgaatcggaggaagacgccgaggggcgggaggatgatggcga 402
>gb|AY108684.1| Zea mays PCO116945 mRNA sequence Length = 626 Score = 65.9 bits (33), Expect = 1e-07 Identities = 95/115 (82%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 256 gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactcg 315 ||||||||||| ||||||| |||||| | || ||||||||||||||||| |||||||| Sbjct: 282 gcgtagatgattccggggacgtagccaaggattgtgagcagcaggcagatgcagaactct 223 Query: 316 a---tcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcga 367 | | | |||| |||| || |||||||||||| ||||| ||||||||||||| Sbjct: 222 attctgcagcagccgaatcggaggaagacgccgaggggcgggaggatgatggcga 168
>ref|NM_183563.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 255 ggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 314 ||||||||||||||| || || ||||||| | ||||||| || ||||||||||||||||| Sbjct: 25 ggcgtagatgatgcccggaagatagccgaggcaggtgaggagaaggcagatccagaactc 84
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 |||||||||||| || |||||||||||| |||| || ||||||||||| || ||||||| Sbjct: 4275604 agacggcgtagaggacgccggggaggtacccgaggatggtgagcagcacgctaatccaga 4275663 Query: 311 actc 314 |||| Sbjct: 4275664 actc 4275667 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 246 gacccagacggcgtagatgatgccggggaggtag 279 ||||||||||| ||||| ||||||||||| |||| Sbjct: 26293474 gacccagacggagtagacgatgccggggacgtag 26293441 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 gaagaagacgccgagcggcgg 353 ||||||||||||||||||||| Sbjct: 26293278 gaagaagacgccgagcggcgg 26293258
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 |||||||||||| || |||||||||||| |||| || ||||||||||| || ||||||| Sbjct: 120825 agacggcgtagaggacgccggggaggtacccgaggatggtgagcagcacgctaatccaga 120884 Query: 311 actc 314 |||| Sbjct: 120885 actc 120888
>dbj|AK121018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049B21, full insert sequence Length = 577 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 |||||||||||| || |||||||||||| |||| || ||||||||||| || ||||||| Sbjct: 214 agacggcgtagaggacgccggggaggtacccgaggatggtgagcagcacgctaatccaga 155 Query: 311 actc 314 |||| Sbjct: 154 actc 151
>ref|XM_475521.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 165 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 256 gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactcg 315 ||||||||||||||||| | ||| || | || ||||||||||||| |||||||||||| Sbjct: 143 gcgtagatgatgccgggtaagtatcccaggatggtgagcagcagggcgatccagaactcc 84 Query: 316 atcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggc 365 || ||| | || | || ||||||||||||||||||||| | |||||| Sbjct: 83 atgccgatgccgtagcggaggaagacgccgagcggcggcagcaggatggc 34
>gb|AF220491.1|AF220491 Fragaria x ananassa O-methyltransferase (omt1) mRNA, complete cds Length = 1876 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 301 cagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggcaggatg 360 |||||||||||||| | ||||||| | ||| ||| |||||| || || || |||| || | Sbjct: 1516 cagatccagaactccaccccgcagccaaacctgaggaagaccccaagaggaggcaagagg 1457 Query: 361 atggcgaggatgatgtcgatgcag 384 ||||||| ||||||||||| |||| Sbjct: 1456 atggcgatgatgatgtcgacgcag 1433
>gb|AY823550.1| Pennisetum glaucum low temperature and salt responsive protein mRNA, complete cds Length = 520 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgagga 370 |||||||||||||||||| |||| ||||||||||| Sbjct: 119 gaagacgccgagcggcgggaggacgatggcgagga 85
>dbj|AK062410.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-E12, full insert sequence Length = 620 Score = 54.0 bits (27), Expect = 5e-04 Identities = 98/121 (80%), Gaps = 3/121 (2%) Strand = Plus / Minus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 |||| |||||||||||||| |||| ||||| | || |||||| |||| |||||| |||| Sbjct: 211 agactgcgtagatgatgccagggacatagccaaggatggtgagaagcaagcagatgcaga 152 Query: 311 actcgatcccgcagg---cgaacttgaagaagacgccgagcggcggcaggatgatggcga 367 |||| || | |||| |||| || |||||||||||| ||||| ||||||||||||| Sbjct: 151 actccatgctgcagcatccgaagcggaggaagacgccgaggggcgggaggatgatggcga 92 Query: 368 g 368 | Sbjct: 91 g 91
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 256 gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 314 ||||||||||||||||| | ||| || | || ||||||||||||| |||||||||||| Sbjct: 36547 gcgtagatgatgccgggtaagtatcccaggatggtgagcagcagggcgatccagaactc 36605 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 336 gaagacgccgagcggcggcaggatgatggc 365 ||||||||||||||||||||| | |||||| Sbjct: 36699 gaagacgccgagcggcggcagcaggatggc 36728
>dbj|AB030211.1| Oryza sativa osr8 mRNA for hydrophobic polypeptide, complete cds Length = 740 Score = 54.0 bits (27), Expect = 5e-04 Identities = 98/121 (80%), Gaps = 3/121 (2%) Strand = Plus / Minus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 |||| |||||||||||||| |||| ||||| | || |||||| |||| |||||| |||| Sbjct: 337 agactgcgtagatgatgccagggacatagccaaggatggtgagaagcaagcagatgcaga 278 Query: 311 actcgatcccgcagg---cgaacttgaagaagacgccgagcggcggcaggatgatggcga 367 |||| || | |||| |||| || |||||||||||| ||||| ||||||||||||| Sbjct: 277 actccatgctgcagcatccgaagcggaggaagacgccgaggggcgggaggatgatggcga 218 Query: 368 g 368 | Sbjct: 217 g 217
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 346 agcggcggcaggatgatggcgaggatgatg 375 |||||||||||||||||||||| ||||||| Sbjct: 5424414 agcggcggcaggatgatggcgatgatgatg 5424443
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgag 368 |||||||||||| ||||| |||||||||||||| Sbjct: 85876 gaagacgccgaggggcgggaggatgatggcgag 85844 Score = 48.1 bits (24), Expect = 0.028 Identities = 54/64 (84%) Strand = Plus / Minus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 |||| |||||||||||||| |||| ||||| | || |||||| |||| |||||| |||| Sbjct: 86840 agactgcgtagatgatgccagggacatagccaaggatggtgagaagcaagcagatgcaga 86781 Query: 311 actc 314 |||| Sbjct: 86780 actc 86777
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgag 368 |||||||||||| ||||| |||||||||||||| Sbjct: 21880442 gaagacgccgaggggcgggaggatgatggcgag 21880410 Score = 48.1 bits (24), Expect = 0.028 Identities = 54/64 (84%) Strand = Plus / Minus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 |||| |||||||||||||| |||| ||||| | || |||||| |||| |||||| |||| Sbjct: 21881406 agactgcgtagatgatgccagggacatagccaaggatggtgagaagcaagcagatgcaga 21881347 Query: 311 actc 314 |||| Sbjct: 21881346 actc 21881343
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgag 368 |||||||||||| ||||| |||||||||||||| Sbjct: 11159 gaagacgccgaggggcgggaggatgatggcgag 11127 Score = 48.1 bits (24), Expect = 0.028 Identities = 54/64 (84%) Strand = Plus / Minus Query: 251 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 310 |||| |||||||||||||| |||| ||||| | || |||||| |||| |||||| |||| Sbjct: 12123 agactgcgtagatgatgccagggacatagccaaggatggtgagaagcaagcagatgcaga 12064 Query: 311 actc 314 |||| Sbjct: 12063 actc 12060
>dbj|AB221353.1| Triticum aestivum wpi6 gene for plasma membrane protein, complete cds Length = 596 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgaggat 371 ||||||||||| || |||||||||||||||||||| Sbjct: 134 gaagacgccgacgggaggcaggatgatggcgaggat 99
>dbj|AB030210.1| Triticum aestivum wpi6 mRNA for hydrophobic polypeptide, complete cds Length = 507 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgaggat 371 ||||||||||| || |||||||||||||||||||| Sbjct: 112 gaagacgccgacgggaggcaggatgatggcgaggat 77
>emb|AJ310994.1|HVU310994 Hordeum vulgare lt101.1 gene for putative membrane protein Length = 2288 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgaggat 371 ||||||||||| ||| ||||| |||||||||||||| Sbjct: 1474 gaagacgccgaccggtggcagaatgatggcgaggat 1439
>emb|Z25537.1|HVBLT101 H.vulgare blt101 mRNA Length = 521 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgaggat 371 ||||||||||| ||| ||||| |||||||||||||| Sbjct: 109 gaagacgccgaccggtggcagaatgatggcgaggat 74
>dbj|AP006122.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16D13, TM0206b, complete sequence Length = 73101 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 328 aacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagttg 387 ||||||| |||||| ||||| || || |||| ||||||||||| |||||| ||| ||||| Sbjct: 39619 aacttgaggaagaccccgagaggagggaggaggatggcgaggaggatgtcaatgaagttg 39678
>ref|XM_470667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 165 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgagga 370 ||||||||||| ||||||||||| |||||| |||| Sbjct: 63 gaagacgccgaccggcggcaggaagatggctagga 29
>gb|AY177891.1| Sorghum bicolor clone BAC 8070 ABA-induced gene, partial sequence Length = 3374 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgagga 370 ||||||||||| |||||| |||| ||||||||||| Sbjct: 2055 gaagacgccgaccggcgggaggaagatggcgagga 2021
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 336 gaagacgccgagcggcggcaggatgatggcgagga 370 ||||||||||| ||||||||||| |||||| |||| Sbjct: 34604 gaagacgccgaccggcggcaggaagatggctagga 34638
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgagga 370 ||||||||||| ||||||||||| |||||| |||| Sbjct: 2282 gaagacgccgaccggcggcaggaagatggctagga 2248
>dbj|AK070872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023071K01, full insert sequence Length = 488 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgagga 370 ||||||||||| ||||||||||| |||||| |||| Sbjct: 158 gaagacgccgaccggcggcaggaagatggctagga 124
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 246 gacccagacggcgtagatgatgccggggaggtag 279 ||||||||||| ||||| ||||||||||| |||| Sbjct: 158014 gacccagacggagtagacgatgccggggacgtag 157981 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 gaagaagacgccgagcggcgg 353 ||||||||||||||||||||| Sbjct: 157818 gaagaagacgccgagcggcgg 157798
>dbj|AK108564.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C08, full insert sequence Length = 850 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 246 gacccagacggcgtagatgatgccggggaggtag 279 ||||||||||| ||||| ||||||||||| |||| Sbjct: 325 gacccagacggagtagacgatgccggggacgtag 292 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 gaagaagacgccgagcggcgg 353 ||||||||||||||||||||| Sbjct: 235 gaagaagacgccgagcggcgg 215
>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence Length = 195273 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 agagacaagcaggcaggcagg 228 ||||||||||||||||||||| Sbjct: 117246 agagacaagcaggcaggcagg 117226
>ref|XM_959093.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial mRNA Length = 2619 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 aggatgatggcgaggatgatg 375 ||||||||||||||||||||| Sbjct: 2054 aggatgatggcgaggatgatg 2074
>ref|XM_330572.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial mRNA Length = 2619 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 aggatgatggcgaggatgatg 375 ||||||||||||||||||||| Sbjct: 2054 aggatgatggcgaggatgatg 2074
>ref|XM_809702.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509611.60) partial mRNA Length = 516 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 gcaagaacaacaaacagatgtacaa 120 |||||||||| |||||||||||||| Sbjct: 454 gcaagaacaagaaacagatgtacaa 430
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 acgccgagcggcggcaggatgatgg 364 ||||||||||||||||| ||||||| Sbjct: 3075650 acgccgagcggcggcagaatgatgg 3075674
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 acgccgagcggcggcaggatgatgg 364 ||||||||||||||||| ||||||| Sbjct: 2951838 acgccgagcggcggcagaatgatgg 2951862
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 acgccgagcggcggcaggatgatgg 364 ||||||||||||||||| ||||||| Sbjct: 2795001 acgccgagcggcggcagaatgatgg 2795025
>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2 Length = 98769 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 aggatgatggcgaggatgatg 375 ||||||||||||||||||||| Sbjct: 43652 aggatgatggcgaggatgatg 43632
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 acgccgagcggcggcaggatgatgg 364 ||||||||||||||||| ||||||| Sbjct: 2795635 acgccgagcggcggcagaatgatgg 2795659
>gb|AY016024.1| Takifugu rubripes alpha globin gene cluster, complete sequence Length = 35793 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 354 caggatgatggcgaggatgatgtcg 378 ||||||| ||||||||||||||||| Sbjct: 28425 caggatggtggcgaggatgatgtcg 28449
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 gatgatggcgaggatgatgtc 377 ||||||||||||||||||||| Sbjct: 528321 gatgatggcgaggatgatgtc 528301
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 tcgtccgccatcttccttcct 417 ||||||||||||||||||||| Sbjct: 609927 tcgtccgccatcttccttcct 609947
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 acgccgagcggcggcaggatgatgg 364 ||||||||||||||||| ||||||| Sbjct: 3586456 acgccgagcggcggcagaatgatgg 3586480
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 acgccgagcggcggcaggatgatgg 364 ||||||||||||||||| ||||||| Sbjct: 3519166 acgccgagcggcggcagaatgatgg 3519190
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 acgccgagcggcggcaggatgatgg 364 ||||||||||||||||| ||||||| Sbjct: 2645103 acgccgagcggcggcagaatgatgg 2645127
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 340 acgccgagcggcggcaggatgatgg 364 ||||||||||||||||| ||||||| Sbjct: 2857327 acgccgagcggcggcagaatgatgg 2857303
>gb|AC152958.1| Mus musculus 6 BAC RP23-301K21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182995 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tagagacaagcaggcaggca 226 |||||||||||||||||||| Sbjct: 85958 tagagacaagcaggcaggca 85939
>gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, complete sequence Length = 167215 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 caggatgatggcgaggatgatgtc 377 ||||||| |||||||||||||||| Sbjct: 96013 caggatggtggcgaggatgatgtc 96036
>gb|AC115723.13| Mus musculus chromosome 5, clone RP23-17D18, complete sequence Length = 206470 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tacactggggaaggtgacag 72 |||||||||||||||||||| Sbjct: 28800 tacactggggaaggtgacag 28819
>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11, complete sequence Length = 198600 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 aggatgatggcgaggatgatgtcgatgc 382 ||||||| ||||| |||||||||||||| Sbjct: 80007 aggatgagggcgatgatgatgtcgatgc 79980
>gb|AC126031.2| Mus musculus BAC clone RP24-84F17 from chromosome 19, complete sequence Length = 217220 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 agagacaagcaggcaggcag 227 |||||||||||||||||||| Sbjct: 73710 agagacaagcaggcaggcag 73691
>gb|AC007203.3| Arabidopsis thaliana chromosome I BAC T10P12 genomic sequence, complete sequence Length = 95190 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 atggaagaaactaggagagc 497 |||||||||||||||||||| Sbjct: 22798 atggaagaaactaggagagc 22779
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12 Length = 273785 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gccgagcggcggcaggatga 361 |||||||||||||||||||| Sbjct: 149058 gccgagcggcggcaggatga 149039
>ref|XM_808652.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053503955.100) partial mRNA Length = 4944 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gatgatggcgaggatgatgt 376 |||||||||||||||||||| Sbjct: 4366 gatgatggcgaggatgatgt 4385
>gb|AC023248.20| Mus musculus chromosome 7, clone RP23-124B2, complete sequence Length = 211123 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caggaggagaggagtctaat 89 |||||||||||||||||||| Sbjct: 86355 caggaggagaggagtctaat 86374
>gb|AC144399.2| Oryctolagus cuniculus clone LBNL1-125D4, complete sequence Length = 191541 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tggatggattatggatacac 51 |||||||||||||||||||| Sbjct: 106298 tggatggattatggatacac 106317
>emb|AL357563.12| Human DNA sequence from clone RP11-9G10 on chromosome 6 Contains a novel FLJ14668 containing pseudogene, complete sequence Length = 70644 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 aggtgacaggaggagaggag 83 |||||||||||||||||||| Sbjct: 10948 aggtgacaggaggagaggag 10929
>emb|AL353679.18| Human DNA sequence from clone RP3-418C23 on chromosome 6 Contains the 5'end of a novel gene, a novel gene and a CpG island, complete sequence Length = 100111 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 ctagagacaagcaggcaggcaggg 229 ||||||| |||||||||||||||| Sbjct: 40660 ctagagataagcaggcaggcaggg 40637
>gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, complete sequence Length = 153860 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 acaaacggaacaagttggcc 196 |||||||||||||||||||| Sbjct: 126748 acaaacggaacaagttggcc 126729
>emb|AL008720.1|HS343C1 Human DNA sequence from clone CTA-343C1 on chromosome 22, complete sequence Length = 198570 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gcaggcaggcaggggcggct 235 |||||||||||||||||||| Sbjct: 87215 gcaggcaggcaggggcggct 87196
>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical class II region, partial sequence Length = 130898 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aagcaagaacaacaaacaga 113 |||||||||||||||||||| Sbjct: 23283 aagcaagaacaacaaacaga 23302
>gb|AY152835.1| Felis catus clone PAC g7 major histocompatiblity complex classical class II region, partial sequence Length = 77680 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aagcaagaacaacaaacaga 113 |||||||||||||||||||| Sbjct: 45240 aagcaagaacaacaaacaga 45259
>ref|XM_781644.1| PREDICTED: Strongylocentrotus purpuratus similar to NADPH oxidase, EF hand calcium-binding domain 5 (LOC581656), mRNA Length = 2703 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 atgatggcgaggatgatgtc 377 |||||||||||||||||||| Sbjct: 1313 atgatggcgaggatgatgtc 1294
>emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 bp, chromosome 7 Length = 281000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caggaggagaggagtctaat 89 |||||||||||||||||||| Sbjct: 277751 caggaggagaggagtctaat 277770
>emb|AL117528.1|HSM801052 Homo sapiens genomic DNA; cDNA DKFZp434P2450 (from clone DKFZp434P2450) Length = 2266 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 ctagagacaagcaggcaggcaggg 229 ||||||| |||||||||||||||| Sbjct: 635 ctagagataagcaggcaggcaggg 612
>emb|BX510370.5| Zebrafish DNA sequence from clone DKEY-31M13 in linkage group 5, complete sequence Length = 112786 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 94 aagcaagaacaacaaacagatgtacaacagca 125 |||||||||||||||||| || ||||| |||| Sbjct: 1653 aagcaagaacaacaaacaaatctacaaaagca 1684
>gb|AC019031.7| Homo sapiens chromosome 8, clone RP11-563O19, complete sequence Length = 157076 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gaagaaggtgagcagcaggc 301 |||||||||||||||||||| Sbjct: 77472 gaagaaggtgagcagcaggc 77453
>ref|XM_686091.1| PREDICTED: Danio rerio similar to inositol 1,4,5-triphosphate receptor, type 1 (LOC562715), mRNA Length = 1521 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 aggatgatggcgaggatgatgtcgatgc 382 ||||||| ||||| |||||||||||||| Sbjct: 1028 aggatgagggcgatgatgatgtcgatgc 1001
>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete sequence Length = 127331 Score = 40.1 bits (20), Expect = 6.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 328 aacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgca 383 ||||||| |||||| ||||| || || ||||||||||| | ||||| |||||||| Sbjct: 96902 aacttgaggaagacaccgagaggagggaggatgatggcaacaatgatatcgatgca 96847
>gb|AC157989.8| Mus musculus chromosome 5, clone RP24-230P10, complete sequence Length = 164538 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 atacacatacactggggaag 65 |||||||||||||||||||| Sbjct: 66956 atacacatacactggggaag 66975
>dbj|AK036021.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630027M07 product:RIKEN cDNA 5730421E18 gene, full insert sequence Length = 1507 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aagcaagaacaacaaacaga 113 |||||||||||||||||||| Sbjct: 1423 aagcaagaacaacaaacaga 1404
>dbj|AK082013.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130094I07 product:RIKEN cDNA 5730421E18 gene, full insert sequence Length = 2601 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aagcaagaacaacaaacaga 113 |||||||||||||||||||| Sbjct: 1434 aagcaagaacaacaaacaga 1415
>gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, complete sequence Length = 166871 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tacactggggaaggtgacag 72 |||||||||||||||||||| Sbjct: 156580 tacactggggaaggtgacag 156599
>gb|U00966.1|U00966 Lophopyrum elongatum salt-stress induced hydrophobic peptide (ESI3) gene, complete cds Length = 652 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 336 gaagacgccgagcggcggcaggatgatggcgaggat 371 ||||||||||| || |||||||| ||||||||||| Sbjct: 263 gaagacgccgacgggaggcaggataatggcgaggat 228
>gb|AC078863.15|AC078863 Mus musculus BAC RP23-406N7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 188008 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 aaatggacagaggaacaact 32 |||||||||||||||||||| Sbjct: 17376 aaatggacagaggaacaact 17395
>gb|AC090023.20| Homo sapiens 12 BAC RP11-221N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114177 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 agaaggtgagcagcaggcag 303 |||||||||||||||||||| Sbjct: 110620 agaaggtgagcagcaggcag 110601
>gb|AE004493.1| Pseudomonas aeruginosa PAO1, section 54 of 529 of the complete genome Length = 11746 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 340 acgccgagcggcggcaggatgatggcga 367 ||||| ||||||||||||| |||||||| Sbjct: 174 acgcccagcggcggcaggaggatggcga 147
>gb|AC094107.3| Homo sapiens chromosome 5 clone RP11-48L3, complete sequence Length = 99286 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ccatcttccttccttgtctc 423 |||||||||||||||||||| Sbjct: 43841 ccatcttccttccttgtctc 43822
>gb|AC117440.5| Homo sapiens 3 BAC RP11-575C1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199386 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ctagagacaagcaggcaggc 225 |||||||||||||||||||| Sbjct: 95020 ctagagacaagcaggcaggc 95001
>emb|AL844207.4| Zebrafish DNA sequence from clone DKEY-166M19, complete sequence Length = 199379 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 94 aagcaagaacaacaaacagatgtacaacagca 125 |||||||||||||||||| || ||||| |||| Sbjct: 188628 aagcaagaacaacaaacaaatctacaaaagca 188597
>emb|X58859.1|HVTHIOL Barley DNA with region homologous to thiol protease (aleurain) Length = 3333 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 104 aacaaacagatgtacaacagcatgaacacaca 135 |||||| |||||||||||| ||| |||||||| Sbjct: 1842 aacaaatagatgtacaacaacataaacacaca 1811
>emb|AJ310995.1|HVU310995 Hordeum vulgare lt101.2 gene for putative membrane protein Length = 3081 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ggcaggatgatggcgaggat 371 |||||||||||||||||||| Sbjct: 517 ggcaggatgatggcgaggat 498
>ref|XM_316287.2| Anopheles gambiae str. PEST ENSANGP00000020503 (ENSANGG00000018014), partial mRNA Length = 1423 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgaagaaggtgagcagcagg 300 |||||||||||||||||||| Sbjct: 653 cgaagaaggtgagcagcagg 634
>emb|CT963096.1| M.spretus DNA sequence from clone XX-CH35_391C2 on chromosome 7, complete sequence Length = 164625 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 caggaggagaggagtctaat 89 |||||||||||||||||||| Sbjct: 16429 caggaggagaggagtctaat 16410
>emb|AL831768.9| Zebrafish DNA sequence from clone RP71-1O1 in linkage group 5, complete sequence Length = 149457 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 94 aagcaagaacaacaaacagatgtacaacagca 125 |||||||||||||||||| || ||||| |||| Sbjct: 40663 aagcaagaacaacaaacaaatctacaaaagca 40694
>gb|AC005753.1|AC005753 Homo sapiens chromosome 5, P1 clone 254f11 (LBNL H164), complete sequence Length = 120452 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ccatcttccttccttgtctc 423 |||||||||||||||||||| Sbjct: 101070 ccatcttccttccttgtctc 101051
>gb|AC107709.12| Mus musculus chromosome 5, clone RP23-60E7, complete sequence Length = 256771 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 atacacatacactggggaag 65 |||||||||||||||||||| Sbjct: 225359 atacacatacactggggaag 225378
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 agccgaagaaggtgagcagc 297 |||||||||||||||||||| Sbjct: 6149292 agccgaagaaggtgagcagc 6149311
>emb|CT025666.5| Zebrafish DNA sequence from clone DKEY-218J1 in linkage group 5, complete sequence Length = 131912 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 94 aagcaagaacaacaaacagatgtacaacagca 125 |||||||||||||||||| || ||||| |||| Sbjct: 128368 aagcaagaacaacaaacaaatctacaaaagca 128399
>emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chromosome 13, complete sequence Length = 183340 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 atggatcacctagagacaagcagg 220 ||||||||| |||||||||||||| Sbjct: 78345 atggatcacatagagacaagcagg 78322
>emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chromosome 2, complete sequence Length = 198573 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 aaatggacagaggaacaact 32 |||||||||||||||||||| Sbjct: 189877 aaatggacagaggaacaact 189858
>emb|AL732572.10| Mouse DNA sequence from clone RP23-32C16 on chromosome 2, complete sequence Length = 213704 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 acaagcaggcaggcaggggc 231 |||||||||||||||||||| Sbjct: 53916 acaagcaggcaggcaggggc 53935
>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete sequence Length = 220275 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aagcaagaacaacaaacaga 113 |||||||||||||||||||| Sbjct: 12181 aagcaagaacaacaaacaga 12200
>dbj|AP001293.1| Mus musculus genomic DNA, chromosome 7, clone:B131, complete sequence Length = 108333 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caggaggagaggagtctaat 89 |||||||||||||||||||| Sbjct: 56105 caggaggagaggagtctaat 56124
>dbj|AP001917.2| Mus musculus genomic DNA , chromosome 7, clone:B131T Length = 68121 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caggaggagaggagtctaat 89 |||||||||||||||||||| Sbjct: 56106 caggaggagaggagtctaat 56125 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,151,706 Number of Sequences: 3902068 Number of extensions: 5151706 Number of successful extensions: 93082 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92274 Number of HSP's gapped (non-prelim): 806 length of query: 506 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 484 effective length of database: 17,147,199,772 effective search space: 8299244689648 effective search space used: 8299244689648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)