>gb|AC125275.8| Mus musculus chromosome 7, clone RP24-165E9, complete sequence
          Length = 218429

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 501    ccttagcctcatccgcactttcttcccccat 531
              ||||||| || ||||||||||||||||||||
Sbjct: 132545 ccttagcttcttccgcactttcttcccccat 132515



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 570    ccttagcctcatccgcactttcttcccccat 600
              ||||||| || ||||||||||||||||||||
Sbjct: 132545 ccttagcttcttccgcactttcttcccccat 132515

>gb|AC101879.8| Mus musculus chromosome 7, clone RP23-378H21, complete sequence
          Length = 174481

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 570  ccttagcctcatccgcactttcttcccccat 600
            ||||||| || ||||||||||||||||||||
Sbjct: 2291 ccttagcttcttccgcactttcttcccccat 2321



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 501  ccttagcctcatccgcactttcttcccccat 531
            ||||||| || ||||||||||||||||||||
Sbjct: 2291 ccttagcttcttccgcactttcttcccccat 2321

>gb|AC148321.7| Mus musculus BAC clone RP24-512H17 from 19, complete sequence
          Length = 210790

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 458   ttgttcccaatagccacttcag 479
             ||||||||||||||||||||||
Sbjct: 88184 ttgttcccaatagccacttcag 88163

>gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome 3, complete sequence
          Length = 214712

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 515   gcactttcttcccccatcttg 535
             |||||||||||||||||||||
Sbjct: 51385 gcactttcttcccccatcttg 51405

>dbj|AP006732.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918a,
             complete sequence
          Length = 48600

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 403   tgctttttcttcgcccatctt 423
             |||||||||||||||||||||
Sbjct: 26718 tgctttttcttcgcccatctt 26738

>gb|AC124614.11| Mus musculus chromosome 10, clone RP24-417L12, complete sequence
          Length = 173306

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   ttcttttgacaggaccatac 223
             ||||||||||||||||||||
Sbjct: 32619 ttcttttgacaggaccatac 32638

>gb|AC149544.1| Populus trichocarpa clone Pop1-69J1, complete sequence
          Length = 94430

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 587   ctttcttcccccatctcgtcttct 610
             ||||||||||||||||| ||||||
Sbjct: 37816 ctttcttcccccatctcttcttct 37839

>gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosome 10, complete
             sequence
          Length = 178936

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   ttcttttgacaggaccatac 223
             ||||||||||||||||||||
Sbjct: 39460 ttcttttgacaggaccatac 39441

>ref|XM_778004.1| PREDICTED: Strongylocentrotus purpuratus similar to transmembrane 4
           superfamily member 13 (predicted) (LOC577795), mRNA
          Length = 1537

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 553 accttcatccatcttgtcct 572
           ||||||||||||||||||||
Sbjct: 525 accttcatccatcttgtcct 506

>emb|BX957219.1| Methanococcus maripaludis S2 complete genome; segment 1/5
          Length = 345730

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 403   tgctttttcttcgcccatcttgtc 426
             |||||||||||||||||| |||||
Sbjct: 30950 tgctttttcttcgcccattttgtc 30973

>gb|BC059553.1| Danio rerio protein (peptidyl-prolyl cis/trans isomerase)
           NIMA-interacting 1, mRNA (cDNA clone MGC:73206
           IMAGE:4790196), complete cds
          Length = 852

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 154 attgcagaaacacttgatggaggt 177
           |||||||||||||| |||||||||
Sbjct: 693 attgcagaaacactggatggaggt 670

>ref|NM_200748.1| Danio rerio protein (peptidyl-prolyl cis/trans isomerase)
           NIMA-interacting 1 (pin1), mRNA
          Length = 852

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 154 attgcagaaacacttgatggaggt 177
           |||||||||||||| |||||||||
Sbjct: 693 attgcagaaacactggatggaggt 670

>gb|AC126943.5| Mus musculus BAC clone RP23-307F3 from chromosome 10, complete sequence
          Length = 192356

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   gtgcataaaaatgaaggtag 346
             ||||||||||||||||||||
Sbjct: 72733 gtgcataaaaatgaaggtag 72752

>gb|AC010883.8| Homo sapiens BAC clone RP11-339H12 from 2, complete sequence
          Length = 215532

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 485    gcttccaccatcttgtcctt 504
              ||||||||||||||||||||
Sbjct: 176311 gcttccaccatcttgtcctt 176292

>gb|AC005235.2| Homo sapiens BAC clone RP11-439M9 from 2, complete sequence
          Length = 197911

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   gccacttcagcagttgcttc 489
             ||||||||||||||||||||
Sbjct: 65586 gccacttcagcagttgcttc 65567

>emb|BX004792.8| Zebrafish DNA sequence from clone DKEY-1J19, complete sequence
          Length = 206371

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    cttttacatgctttttcttc 414
              ||||||||||||||||||||
Sbjct: 143907 cttttacatgctttttcttc 143926

>emb|BX284674.8| Zebrafish DNA sequence from clone DKEYP-52E12 in linkage group 20,
              complete sequence
          Length = 170998

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    cttttacatgctttttcttc 414
              ||||||||||||||||||||
Sbjct: 166171 cttttacatgctttttcttc 166152

>emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in linkage group 19,
             complete sequence
          Length = 166128

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 443   tttacttccactatgttgttccca 466
             ||||||||||||||||||| ||||
Sbjct: 92328 tttacttccactatgttgtaccca 92305

>emb|CT030149.9| Mouse DNA sequence from clone RP24-394D13 on chromosome 16, complete
              sequence
          Length = 177163

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    ttcttcccccatcttgtctt 539
              ||||||||||||||||||||
Sbjct: 137327 ttcttcccccatcttgtctt 137308

>dbj|AP006647.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT29F18, TM0312,
             complete sequence
          Length = 119276

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   catgctttttcttcgcccat 420
             ||||||||||||||||||||
Sbjct: 51694 catgctttttcttcgcccat 51675


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,860,095
Number of Sequences: 3902068
Number of extensions: 5860095
Number of successful extensions: 106593
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106552
Number of HSP's gapped (non-prelim): 41
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)