Clone Name	rbaal5j03
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AF498269.1| Haynaldia villosa clone kong32 mRNA	458	e-126
2	ref|XM_462851.1| Oryza sativa (japonica cultivar-group), predic...	248	1e-62
3	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	248	1e-62
4	dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic D...	248	1e-62
5	dbj|AK102013.1| Oryza sativa (japonica cultivar-group) cDNA clon...	248	1e-62
6	dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic D...	248	1e-62
7	dbj|AK058929.1| Oryza sativa (japonica cultivar-group) cDNA clon...	240	3e-60
8	dbj|AK066266.1| Oryza sativa (japonica cultivar-group) cDNA clon...	234	2e-58
9	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	168	9e-39
10	gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str...	168	9e-39
11	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	168	9e-39
12	dbj|AK103722.1| Oryza sativa (japonica cultivar-group) cDNA clon...	168	9e-39
13	gb|AY105513.1| Zea mays PCO138699 mRNA sequence	161	2e-36
14	dbj|AP006137.1| Lotus japonicus genomic DNA, chromosome 5, clone...	137	3e-29
15	gb|AY106304.1| Zea mays PCO097673 mRNA sequence	115	1e-22
16	gb|AY639034.1| Arachis hypogaea auxin-induced putative CP12 doma...	92	2e-15
17	dbj|D45857.1|SOYCHLI Soybean mRNA for Mg chelatase subunit (46 k...	72	2e-09
18	emb|AJ011571.1|CPA011571 Cyanophora paradoxa mRNA for hypothetic...	68	2e-08
19	gb|AY103974.1| Zea mays PCO123560 mRNA sequence	58	2e-05
20	gb|M95076.1|MZEORFQ Zea mays putative glyceraldehyde-3-phosphate...	58	2e-05
21	emb|Z72489.1|PSCP12 P.sativum mRNA for CP12	52	0.001
22	emb|AJ005285.1|CPAJ5285 Ceratodon purpureus mRNA for Calvin cycl...	52	0.001
23	ref|NM_130308.2| Arabidopsis thaliana CP12-1 AT2G47400 (CP12-1) ...	50	0.006
24	ref|XM_493811.1| Oryza sativa (japonica cultivar-group), predic...	50	0.006
25	emb|Z72487.1|SOCP12 S.oleracea mRNA for CP12	50	0.006
26	gb|AY143796.1| Arabidopsis thaliana At2g47400/T8I13.24 mRNA, com...	50	0.006
27	gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome...	50	0.006
28	gb|AY114595.1| Arabidopsis thaliana putative chloroplast protein...	50	0.006
29	gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map...	50	0.006
30	gb|AY062839.1| Arabidopsis thaliana putative chloroplast protein...	50	0.006
31	gb|AY052217.1| Arabidopsis thaliana At2g47400/T8I13.24 mRNA, com...	50	0.006
32	gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome...	50	0.006
33	emb|BX819333.1|CNS0A8U2 Arabidopsis thaliana Full-length cDNA Co...	50	0.006
34	dbj|AK067755.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.006
35	dbj|AK059014.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.006
36	dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic D...	50	0.006
37	gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome...	46	0.091
38	gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome...	46	0.091
39	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.091
40	ref|XM_483322.1| Oryza sativa (japonica cultivar-group), mRNA	44	0.36
41	gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthe...	44	0.36
42	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	44	0.36
43	emb|BX819584.1|CNS0A8ZQ Arabidopsis thaliana Full-length cDNA Co...	44	0.36
44	dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D...	44	0.36
45	emb|AJ005284.1|CRAJ5284 Chlamydomonas reinhardtii mRNA for Calvi...	44	0.36
46	dbj|AK107793.1| Oryza sativa (japonica cultivar-group) cDNA clon...	44	0.36
47	gb|AC186169.1| Ornithorhynchus anatinus chromosome UNK clone OAB...	42	1.4
48	gb|AE009890.1|AE009890 Pyrobaculum aerophilum strain IM2 section...	42	1.4
49	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	42	1.4
50	ref|NM_106306.2| Arabidopsis thaliana unknown protein AT1G76560 ...	40	5.6
51	gb|DQ214375.1| Taeniopygia guttata clone 0058P0012B04 HS1 bindin...	40	5.6
52	emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in...	40	5.6
53	gb|AC125040.4| Mus musculus BAC clone RP23-335C9 from chromosome...	40	5.6
54	ref|XM_722747.1| Plasmodium yoelii yoelii str. 17XNL hypothetica...	40	5.6
55	ref|XM_666299.1| Plasmodium berghei strain ANKA hypothetical pro...	40	5.6
56	emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segmen...	40	5.6
57	gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete se...	40	5.6
58	gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple...	40	5.6
59	gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome	40	5.6
60	gb|AC015450.5|AC015450 Arabidopsis thaliana chromosome 1 BAC F14...	40	5.6
61	gb|AF310675.1|AF310675 Chlamydomonas reinhardtii trans-splicing ...	40	5.6
62	gb|AF310674.1|AF310674 Chlamydomonas reinhardtii trans-splicing ...	40	5.6
63	gb|BT004753.1| Arabidopsis thaliana At1g76560 gene, complete cds	40	5.6
64	gb|AY085359.1| Arabidopsis thaliana clone 147838 mRNA, complete ...	40	5.6
65	gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the...	40	5.6
66	emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, co...	40	5.6

---

>gb|AF498269.1| Haynaldia villosa clone kong32 mRNA
          Length = 1219

 Score =  458 bits (231), Expect = e-126
 Identities = 260/269 (96%), Gaps = 3/269 (1%)
 Strand = Plus / Plus

                                                                       
Query: 151 cgtccacaacaaattagc---tacgctcagctgtcgtaggtgcggcactcgtcggtctcg 207
           |||||| |||||||||||   |||||||||||||||||||||||||||||||||||||||
Sbjct: 199 cgtccagaacaaattagcacgtacgctcagctgtcgtaggtgcggcactcgtcggtctcg 258

                                                                       
Query: 208 gggttctccttgcagtagttctcgagcgggtcggagtccttgagcttgtcccgggcgtgg 267
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 259 gggttctccttgcagtagttctcgagcgggtccgagtccttgagcttgtcccgggcgtgg 318

                                                                       
Query: 268 ctggccgcggcgctgagctcctccacctcgtcccacgccgccgcgcactccccgctggcg 327
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 319 ctggccgcggcgctgagctcctccacctcgtcccacgccgcggcgcactccccgctggcg 378

                                                                       
Query: 328 gcgtcctccgagcacgtctcctgggcctccttgatgctctccgacatcttgtcggagatg 387
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 379 gcgtcctccgagcacgtctcctgggcctccttgatgctgtccgacatcttgtcggagatg 438

                                        
Query: 388 cccgacggcgtggacggcccgcccgccct 416
           |||| |||||||| |||||||||||||||
Sbjct: 439 cccggcggcgtggccggcccgcccgccct 467



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 1   cacgtatgtccctgggaaaatatttcgagcatttttactacatacatc 48
           ||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 62  cacgtatgtccctgggaaaatatttggcgcgtttttactacatacatc 109

---

>ref|XM_462851.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 375

 Score =  248 bits (125), Expect = 1e-62
 Identities = 217/247 (87%), Gaps = 3/247 (1%)
 Strand = Plus / Minus

                                                                       
Query: 174 tcagctgtcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgag 233
           |||| |||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||
Sbjct: 375 tcagttgtcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtaggcctcgag 316

                                                                       
Query: 234 cgggtcggag---tccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctc 290
           ||||||||||   |||||||||||||| || |||||||| ||||| ||||| ||||||||
Sbjct: 315 cgggtcggaggtctccttgagcttgtcgcgcgcgtggctcgccgccgcgctcagctcctc 256

                                                                       
Query: 291 cacctcgtcccacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctg 350
           ||||||||||||||||||||||||||| ||||| || | |||||||| ||||| ||||| 
Sbjct: 255 cacctcgtcccacgccgccgcgcactcgccgctcgccgtgtcctccgcgcacgcctcctt 196

                                                                       
Query: 351 ggcctccttgatgctctccgacatcttgtcggagatgcccgacggcgtggacggcccgcc 410
            ||||  | ||||||||||||||||||||| |||||| ||| |||||| | |||||||| 
Sbjct: 195 cgccttgtcgatgctctccgacatcttgtccgagatgtccggcggcgtcgccggcccgct 136

                  
Query: 411 cgccctc 417
           |||||||
Sbjct: 135 cgccctc 129

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  248 bits (125), Expect = 1e-62
 Identities = 217/247 (87%), Gaps = 3/247 (1%)
 Strand = Plus / Plus

                                                                            
Query: 174      tcagctgtcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgag 233
                |||| |||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||
Sbjct: 11200964 tcagttgtcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtaggcctcgag 11201023

                                                                            
Query: 234      cgggtcggag---tccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctc 290
                ||||||||||   |||||||||||||| || |||||||| ||||| ||||| ||||||||
Sbjct: 11201024 cgggtcggaggtctccttgagcttgtcgcgcgcgtggctcgccgccgcgctcagctcctc 11201083

                                                                            
Query: 291      cacctcgtcccacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctg 350
                ||||||||||||||||||||||||||| ||||| || | |||||||| ||||| ||||| 
Sbjct: 11201084 cacctcgtcccacgccgccgcgcactcgccgctcgccgtgtcctccgcgcacgcctcctt 11201143

                                                                            
Query: 351      ggcctccttgatgctctccgacatcttgtcggagatgcccgacggcgtggacggcccgcc 410
                 ||||  | ||||||||||||||||||||| |||||| ||| |||||| | |||||||| 
Sbjct: 11201144 cgccttgtcgatgctctccgacatcttgtccgagatgtccggcggcgtcgccggcccgct 11201203

                       
Query: 411      cgccctc 417
                |||||||
Sbjct: 11201204 cgccctc 11201210

---

>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1146F03
          Length = 137047

 Score =  248 bits (125), Expect = 1e-62
 Identities = 217/247 (87%), Gaps = 3/247 (1%)
 Strand = Plus / Plus

                                                                         
Query: 174   tcagctgtcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgag 233
             |||| |||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||
Sbjct: 92757 tcagttgtcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtaggcctcgag 92816

                                                                         
Query: 234   cgggtcggag---tccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctc 290
             ||||||||||   |||||||||||||| || |||||||| ||||| ||||| ||||||||
Sbjct: 92817 cgggtcggaggtctccttgagcttgtcgcgcgcgtggctcgccgccgcgctcagctcctc 92876

                                                                         
Query: 291   cacctcgtcccacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctg 350
             ||||||||||||||||||||||||||| ||||| || | |||||||| ||||| ||||| 
Sbjct: 92877 cacctcgtcccacgccgccgcgcactcgccgctcgccgtgtcctccgcgcacgcctcctt 92936

                                                                         
Query: 351   ggcctccttgatgctctccgacatcttgtcggagatgcccgacggcgtggacggcccgcc 410
              ||||  | ||||||||||||||||||||| |||||| ||| |||||| | |||||||| 
Sbjct: 92937 cgccttgtcgatgctctccgacatcttgtccgagatgtccggcggcgtcgccggcccgct 92996

                    
Query: 411   cgccctc 417
             |||||||
Sbjct: 92997 cgccctc 93003

---

>dbj|AK102013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080D15, full
           insert sequence
          Length = 710

 Score =  248 bits (125), Expect = 1e-62
 Identities = 217/247 (87%), Gaps = 3/247 (1%)
 Strand = Plus / Minus

                                                                       
Query: 174 tcagctgtcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgag 233
           |||| |||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||
Sbjct: 444 tcagttgtcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtaggcctcgag 385

                                                                       
Query: 234 cgggtcggag---tccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctc 290
           ||||||||||   |||||||||||||| || |||||||| ||||| ||||| ||||||||
Sbjct: 384 cgggtcggaggtctccttgagcttgtcgcgcgcgtggctcgccgccgcgctcagctcctc 325

                                                                       
Query: 291 cacctcgtcccacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctg 350
           ||||||||||||||||||||||||||| ||||| || | |||||||| ||||| ||||| 
Sbjct: 324 cacctcgtcccacgccgccgcgcactcgccgctcgccgtgtcctccgcgcacgcctcctt 265

                                                                       
Query: 351 ggcctccttgatgctctccgacatcttgtcggagatgcccgacggcgtggacggcccgcc 410
            ||||  | ||||||||||||||||||||| |||||| ||| |||||| | |||||||| 
Sbjct: 264 cgccttgtcgatgctctccgacatcttgtccgagatgtccggcggcgtcgccggcccgct 205

                  
Query: 411 cgccctc 417
           |||||||
Sbjct: 204 cgccctc 198

---

>dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0035H10
          Length = 109475

 Score =  248 bits (125), Expect = 1e-62
 Identities = 217/247 (87%), Gaps = 3/247 (1%)
 Strand = Plus / Plus

                                                                         
Query: 174   tcagctgtcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgag 233
             |||| |||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||
Sbjct: 99697 tcagttgtcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtaggcctcgag 99756

                                                                         
Query: 234   cgggtcggag---tccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctc 290
             ||||||||||   |||||||||||||| || |||||||| ||||| ||||| ||||||||
Sbjct: 99757 cgggtcggaggtctccttgagcttgtcgcgcgcgtggctcgccgccgcgctcagctcctc 99816

                                                                         
Query: 291   cacctcgtcccacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctg 350
             ||||||||||||||||||||||||||| ||||| || | |||||||| ||||| ||||| 
Sbjct: 99817 cacctcgtcccacgccgccgcgcactcgccgctcgccgtgtcctccgcgcacgcctcctt 99876

                                                                         
Query: 351   ggcctccttgatgctctccgacatcttgtcggagatgcccgacggcgtggacggcccgcc 410
              ||||  | ||||||||||||||||||||| |||||| ||| |||||| | |||||||| 
Sbjct: 99877 cgccttgtcgatgctctccgacatcttgtccgagatgtccggcggcgtcgccggcccgct 99936

                    
Query: 411   cgccctc 417
             |||||||
Sbjct: 99937 cgccctc 99943

---

>dbj|AK058929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C09, full
           insert sequence
          Length = 723

 Score =  240 bits (121), Expect = 3e-60
 Identities = 216/247 (87%), Gaps = 3/247 (1%)
 Strand = Plus / Minus

                                                                       
Query: 174 tcagctgtcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgag 233
           |||| |||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||
Sbjct: 444 tcagttgtcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtaggcctcgag 385

                                                                       
Query: 234 cgggtcggag---tccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctc 290
           ||||||||||   |||||||||||||| || |||||||| ||||| ||||| ||||||||
Sbjct: 384 cgggtcggaggtctccttgagcttgtcgcgcgcgtggctcgccgccgcgctcagctcctc 325

                                                                       
Query: 291 cacctcgtcccacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctg 350
           ||||||||||||||||||||||||||| ||||| || | |||||| | ||||| ||||| 
Sbjct: 324 cacctcgtcccacgccgccgcgcactcgccgctcgccgtgtcctctgcgcacgcctcctt 265

                                                                       
Query: 351 ggcctccttgatgctctccgacatcttgtcggagatgcccgacggcgtggacggcccgcc 410
            ||||  | ||||||||||||||||||||| |||||| ||| |||||| | |||||||| 
Sbjct: 264 cgccttgtcgatgctctccgacatcttgtccgagatgtccggcggcgtcgccggcccgct 205

                  
Query: 411 cgccctc 417
           |||||||
Sbjct: 204 cgccctc 198

---

>dbj|AK066266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056L22, full
           insert sequence
          Length = 712

 Score =  234 bits (118), Expect = 2e-58
 Identities = 201/228 (88%), Gaps = 3/228 (1%)
 Strand = Plus / Minus

                                                                       
Query: 174 tcagctgtcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgag 233
           |||| |||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||
Sbjct: 446 tcagttgtcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtaggcctcgag 387

                                                                       
Query: 234 cgggtcggag---tccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctc 290
           ||||||||||   |||||||||||||| || |||||||| ||||| ||||| ||||||||
Sbjct: 386 cgggtcggaggtctccttgagcttgtcgcgcgcgtggctcgccgccgcgctcagctcctc 327

                                                                       
Query: 291 cacctcgtcccacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctg 350
           ||||||||||||||||||||||||||| ||||| || | |||||||| ||||| ||||| 
Sbjct: 326 cacctcgtcccacgccgccgcgcactcgccgctcgccgtgtcctccgcgcacgcctcctt 267

                                                           
Query: 351 ggcctccttgatgctctccgacatcttgtcggagatgcccgacggcgt 398
            ||||  | ||||||||||||||||||||| |||||| ||| ||||||
Sbjct: 266 cgccttgtcgatgctctccgacatcttgtccgagatgtccggcggcgt 219

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  168 bits (85), Expect = 9e-39
 Identities = 166/193 (86%)
 Strand = Plus / Minus

                                                                            
Query: 181      tcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
                |||||||||||||||||||||||||| ||||| ||||||||||| | |||||||||||||
Sbjct: 10882783 tcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtactcctcgagcgggtcg 10882724

                                                                            
Query: 241      gagtccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctccacctcgtcc 300
                  ||||||      ||| || ||||||||||| |||||||||||||||||||||||||||
Sbjct: 10882723 ctgtccttcttgcggtcgcgcgcgtggctggcggcggcgctgagctcctccacctcgtcc 10882664

                                                                            
Query: 301      cacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctgggcctccttg 360
                ||||||||||||||||| ||||   | | |||  ||| |||||||||||  |||| ||||
Sbjct: 10882663 cacgccgccgcgcactcgccgccctccgggtcgcccgcgcacgtctcctccgcctgcttg 10882604

                             
Query: 361      atgctctccgaca 373
                |||||||||||||
Sbjct: 10882603 atgctctccgaca 10882591



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                
Query: 192     gcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
               ||||||||||||||| ||||| ||||||||| ||| ||| || ||||||
Sbjct: 1644879 gcactcgtcggtctccgggttgtccttgcagaagtcctccagtgggtcg 1644831

---

>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score =  168 bits (85), Expect = 9e-39
 Identities = 166/193 (86%)
 Strand = Plus / Plus

                                                                         
Query: 181   tcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
             |||||||||||||||||||||||||| ||||| ||||||||||| | |||||||||||||
Sbjct: 98246 tcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtactcctcgagcgggtcg 98305

                                                                         
Query: 241   gagtccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctccacctcgtcc 300
               ||||||      ||| || ||||||||||| |||||||||||||||||||||||||||
Sbjct: 98306 ctgtccttcttgcggtcgcgcgcgtggctggcggcggcgctgagctcctccacctcgtcc 98365

                                                                         
Query: 301   cacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctgggcctccttg 360
             ||||||||||||||||| ||||   | | |||  ||| |||||||||||  |||| ||||
Sbjct: 98366 cacgccgccgcgcactcgccgccctccgggtcgcccgcgcacgtctcctccgcctgcttg 98425

                          
Query: 361   atgctctccgaca 373
             |||||||||||||
Sbjct: 98426 atgctctccgaca 98438

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  168 bits (85), Expect = 9e-39
 Identities = 166/193 (86%)
 Strand = Plus / Minus

                                                                            
Query: 181      tcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
                |||||||||||||||||||||||||| ||||| ||||||||||| | |||||||||||||
Sbjct: 10880884 tcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtactcctcgagcgggtcg 10880825

                                                                            
Query: 241      gagtccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctccacctcgtcc 300
                  ||||||      ||| || ||||||||||| |||||||||||||||||||||||||||
Sbjct: 10880824 ctgtccttcttgcggtcgcgcgcgtggctggcggcggcgctgagctcctccacctcgtcc 10880765

                                                                            
Query: 301      cacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctgggcctccttg 360
                ||||||||||||||||| ||||   | | |||  ||| |||||||||||  |||| ||||
Sbjct: 10880764 cacgccgccgcgcactcgccgccctccgggtcgcccgcgcacgtctcctccgcctgcttg 10880705

                             
Query: 361      atgctctccgaca 373
                |||||||||||||
Sbjct: 10880704 atgctctccgaca 10880692



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                
Query: 192     gcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
               ||||||||||||||| ||||| ||||||||| ||| ||| || ||||||
Sbjct: 1644877 gcactcgtcggtctccgggttgtccttgcagaagtcctccagtgggtcg 1644829

---

>dbj|AK103722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B13, full
           insert sequence
          Length = 623

 Score =  168 bits (85), Expect = 9e-39
 Identities = 166/193 (86%)
 Strand = Plus / Minus

                                                                       
Query: 181 tcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
           |||||||||||||||||||||||||| ||||| ||||||||||| | |||||||||||||
Sbjct: 430 tcgtaggtgcggcactcgtcggtctccgggttgtccttgcagtactcctcgagcgggtcg 371

                                                                       
Query: 241 gagtccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctccacctcgtcc 300
             ||||||      ||| || ||||||||||| |||||||||||||||||||||||||||
Sbjct: 370 ctgtccttcttgcggtcgcgcgcgtggctggcggcggcgctgagctcctccacctcgtcc 311

                                                                       
Query: 301 cacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctgggcctccttg 360
           ||||||||||||||||| ||||   | | |||  ||| |||||||||||  |||| ||||
Sbjct: 310 cacgccgccgcgcactcgccgccctccgggtcgcccgcgcacgtctcctccgcctgcttg 251

                        
Query: 361 atgctctccgaca 373
           |||||||||||||
Sbjct: 250 atgctctccgaca 238

---

>gb|AY105513.1| Zea mays PCO138699 mRNA sequence
          Length = 747

 Score =  161 bits (81), Expect = 2e-36
 Identities = 165/193 (85%)
 Strand = Plus / Minus

                                                                       
Query: 181 tcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
           ||||| |||||||||||||||||||||||||| ||||||||||| | |||||||||||||
Sbjct: 412 tcgtacgtgcggcactcgtcggtctcggggttgtccttgcagtactcctcgagcgggtcg 353

                                                                       
Query: 241 gagtccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctccacctcgtcc 300
           | | ||||  ||  ||| ||   ||||||||  || ||||||||||||||||||||||||
Sbjct: 352 gcgcccttctgccggtcgcgcaagtggctggtggccgcgctgagctcctccacctcgtcc 293

                                                                       
Query: 301 cacgccgccgcgcactccccgctggcggcgtcctccgagcacgtctcctgggcctccttg 360
           ||||||||| ||||||| |||||  | | ||| || | ||||||||||||||||| ||||
Sbjct: 292 cacgccgccacgcactcgccgctcaccgggtcatctgcgcacgtctcctgggcctgcttg 233

                        
Query: 361 atgctctccgaca 373
           |||||||| ||||
Sbjct: 232 atgctctcggaca 220

---

>dbj|AP006137.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT37K17, TM0239,
             complete sequence
          Length = 106506

 Score =  137 bits (69), Expect = 3e-29
 Identities = 126/145 (86%)
 Strand = Plus / Plus

                                                                         
Query: 181   tcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
             |||||||| |||||||| || ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 55007 tcgtaggtacggcactcatcagtctccgggttctccttgcagtagttctcaagcgggtcg 55066

                                                                         
Query: 241   gagtccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctccacctcgtcc 300
             |  || || ||||||||||  |||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 55067 gtttctttcagcttgtccctcgcgtggctcgccgccgcgctcagctcctccacctcatcc 55126

                                      
Query: 301   cacgccgccgcgcactccccgctgg 325
             || ||||| || ||||| |||||||
Sbjct: 55127 caagccgcggcacactcgccgctgg 55151

---

>gb|AY106304.1| Zea mays PCO097673 mRNA sequence
          Length = 791

 Score =  115 bits (58), Expect = 1e-22
 Identities = 70/74 (94%)
 Strand = Plus / Minus

                                                                       
Query: 244 tccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctccacctcgtcccac 303
           ||||||||  |||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 468 tccttgaggctgtcgcgggcgtggctggccgtggcgctgagctcctccacctcgtcccac 409

                         
Query: 304 gccgccgcgcactc 317
           ||||||||||||||
Sbjct: 408 gccgccgcgcactc 395



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 334 tccgagcacgtctcctgggcctccttgatgctctccgacatcttgtcggagatgcccgac 393
           |||| |||||||||||  |||| ||||||||||||||||| ||||||||||||  ||| |
Sbjct: 375 tccgcgcacgtctcctccgcctgcttgatgctctccgacaccttgtcggagatctccggc 316

                           
Query: 394 ggcgtggacggcccgc 409
           ||||||| ||||||||
Sbjct: 315 ggcgtggccggcccgc 300



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 179 tgtcgtaggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgagcgggt 238
           |||||||| |||||||||| ||||  || ||||| ||||||||||| |||||||||||||
Sbjct: 542 tgtcgtagatgcggcactcctcggagtccgggttgtccttgcagtacttctcgagcgggt 483

             
Query: 239 cg 240
           ||
Sbjct: 482 cg 481

---

>gb|AY639034.1| Arachis hypogaea auxin-induced putative CP12 domain-containing
           protein mRNA, partial cds
          Length = 219

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 112/134 (83%)
 Strand = Plus / Minus

                                                                       
Query: 184 taggtgcggcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcggag 243
           |||||||||||||| || ||||| ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 212 taggtgcggcactcatcagtctccgggttatccttgcagtaattctcaagcgggtccgat 153

                                                                       
Query: 244 tccttgagcttgtcccgggcgtggctggccgcggcgctgagctcctccacctcgtcccac 303
           || ||   ||||||||  || ||||| ||||| ||||| |||||||| ||||| ||||| 
Sbjct: 152 tctttcttcttgtccctcgcatggctcgccgccgcgctcagctcctctacctcatcccaa 93

                         
Query: 304 gccgccgcgcactc 317
           |||||||| |||||
Sbjct: 92  gccgccgcacactc 79

---

>dbj|D45857.1|SOYCHLI Soybean mRNA for Mg chelatase subunit (46 kD), complete cds
          Length = 1953

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 201 ggtctcggggttctccttgcagtagttctcgagcgggtcggagtcctt 248
           |||||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 194 ggtctccgggttgtccttgcagtaattctcgagcgggtcggagtcctt 241

---

>emb|AJ011571.1|CPA011571 Cyanophora paradoxa mRNA for hypothetical protein, partial
          Length = 386

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                             
Query: 189 gcggcactcgtcggtctcggggttctccttgcag 222
           ||||||||||||||||||||||||||||||||||
Sbjct: 245 gcggcactcgtcggtctcggggttctccttgcag 212



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 282 gagctcctccacctcgtcccacgc 305
           ||||||||| ||||||||||||||
Sbjct: 155 gagctcctcgacctcgtcccacgc 132

---

>gb|AY103974.1| Zea mays PCO123560 mRNA sequence
          Length = 1889

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 192  gcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
            ||||||||||||||||||||| ||||||||| ||| ||| || ||||||
Sbjct: 1573 gcactcgtcggtctcggggttgtccttgcagaagtcctccagagggtcg 1525

---

>gb|M95076.1|MZEORFQ Zea mays putative glyceraldehyde-3-phosphate dehydrogenase mRNA,
           partial cds
          Length = 188

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 192 gcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
           ||||||||||||||||||||| ||||||||| ||| ||| || ||||||
Sbjct: 156 gcactcgtcggtctcggggttgtccttgcagaagtcctccagagggtcg 108

---

>emb|Z72489.1|PSCP12 P.sativum mRNA for CP12
          Length = 587

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 271 gccgcggcgctgagctcctccacctcgtcccacgccgc 308
           ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 333 gccgccgcgctgagttcctccacctcatcccacgccgc 296

---

>emb|AJ005285.1|CPAJ5285 Ceratodon purpureus mRNA for Calvin cycle CP12 protein (partial)
          Length = 98

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 277 gcgctgagctcctccacctcgtcccacgcc 306
           |||||||||||||||||||| |||||||||
Sbjct: 95  gcgctgagctcctccacctcatcccacgcc 66

---

>ref|NM_130308.2| Arabidopsis thaliana CP12-1 AT2G47400 (CP12-1) mRNA, complete cds
          Length = 585

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 283 agctcctccacctcgtcccacgccgccgcgcactccccgct 323
           |||||||||||||||||||| |||||  | |||||||||||
Sbjct: 295 agctcctccacctcgtcccaagccgctacacactccccgct 255

---

>ref|XM_493811.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1335

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 192  gcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
            ||||||||||||||| ||||| ||||||||| ||| ||| || ||||||
Sbjct: 1317 gcactcgtcggtctccgggttgtccttgcagaagtcctccagtgggtcg 1269

---

>emb|Z72487.1|SOCP12 S.oleracea mRNA for CP12
          Length = 523

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 283 agctcctccacctcgtcccacgccgccgcgcactccccgct 323
           |||||||||||| |||||||||||||| | ||||| |||||
Sbjct: 292 agctcctccaccacgtcccacgccgccacacactcgccgct 252

---

>gb|AY143796.1| Arabidopsis thaliana At2g47400/T8I13.24 mRNA, complete cds
          Length = 375

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 283 agctcctccacctcgtcccacgccgccgcgcactccccgct 323
           |||||||||||||||||||| |||||  | |||||||||||
Sbjct: 260 agctcctccacctcgtcccaagccgctacacactccccgct 220

---

>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 192   gcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
             ||||||||||||||| ||||| ||||||||| ||| ||| || ||||||
Sbjct: 52325 gcactcgtcggtctccgggttgtccttgcagaagtcctccagtgggtcg 52277

---

>gb|AY114595.1| Arabidopsis thaliana putative chloroplast protein CP12 (At2g47400)
           mRNA, complete cds
          Length = 470

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 283 agctcctccacctcgtcccacgccgccgcgcactccccgct 323
           |||||||||||||||||||| |||||  | |||||||||||
Sbjct: 260 agctcctccacctcgtcccaagccgctacacactccccgct 220

---

>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete
             sequence
          Length = 88068

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 283   agctcctccacctcgtcccacgccgccgcgcactccccgct 323
             |||||||||||||||||||| |||||  | |||||||||||
Sbjct: 81424 agctcctccacctcgtcccaagccgctacacactccccgct 81384

---

>gb|AY062839.1| Arabidopsis thaliana putative chloroplast protein CP12 (At2g47400;
           T8I13.24) mRNA, complete cds
          Length = 549

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 283 agctcctccacctcgtcccacgccgccgcgcactccccgct 323
           |||||||||||||||||||| |||||  | |||||||||||
Sbjct: 279 agctcctccacctcgtcccaagccgctacacactccccgct 239

---

>gb|AY052217.1| Arabidopsis thaliana At2g47400/T8I13.24 mRNA, complete cds
          Length = 565

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 283 agctcctccacctcgtcccacgccgccgcgcactccccgct 323
           |||||||||||||||||||| |||||  | |||||||||||
Sbjct: 295 agctcctccacctcgtcccaagccgctacacactccccgct 255

---

>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
              complete sequence
          Length = 127098

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 192    gcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
              ||||||||||||||| ||||| ||||||||| ||| ||| || ||||||
Sbjct: 124440 gcactcgtcggtctccgggttgtccttgcagaagtcctccagtgggtcg 124392

---

>emb|BX819333.1|CNS0A8U2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB69ZG11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 490

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 283 agctcctccacctcgtcccacgccgccgcgcactccccgct 323
           |||||||||||||||||||| |||||  | |||||||||||
Sbjct: 228 agctcctccacctcgtcccaagccgctacacactccccgct 188

---

>dbj|AK067755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118G18, full
            insert sequence
          Length = 1668

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 192  gcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
            ||||||||||||||| ||||| ||||||||| ||| ||| || ||||||
Sbjct: 1372 gcactcgtcggtctccgggttgtccttgcagaagtcctccagtgggtcg 1324

---

>dbj|AK059014.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A08, full
           insert sequence
          Length = 892

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 192 gcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
           ||||||||||||||| ||||| ||||||||| ||| ||| || ||||||
Sbjct: 642 gcactcgtcggtctccgggttgtccttgcagaagtcctccagtgggtcg 594

---

>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 192   gcactcgtcggtctcggggttctccttgcagtagttctcgagcgggtcg 240
             ||||||||||||||| ||||| ||||||||| ||| ||| || ||||||
Sbjct: 57342 gcactcgtcggtctccgggttgtccttgcagaagtcctccagtgggtcg 57294

---

>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0020H14, complete sequence
          Length = 185623

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 285  ctcctccacctcgtcccacgccgccgc 311
            ||||||| |||||||||||||||||||
Sbjct: 5035 ctcctcctcctcgtcccacgccgccgc 5009

---

>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01,
             complete sequence
          Length = 160142

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 285   ctcctccacctcgtcccacgccgccgc 311
             ||||||| |||||||||||||||||||
Sbjct: 44262 ctcctcctcctcgtcccacgccgccgc 44236

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 285      ctcctccacctcgtcccacgccgccgc 311
                ||||||| |||||||||||||||||||
Sbjct: 21451179 ctcctcctcctcgtcccacgccgccgc 21451153

---

>ref|XM_483322.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 426

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 285 ctcctccacctcgtcccacgcc 306
           ||||||||||||||||||||||
Sbjct: 297 ctcctccacctcgtcccacgcc 276

---

>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and
             flanking regions
          Length = 116831

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 291   cacctcgtcccacgccgccgcg 312
             ||||||||||||||||||||||
Sbjct: 95003 cacctcgtcccacgccgccgcg 94982

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 285      ctcctccacctcgtcccacgcc 306
                ||||||||||||||||||||||
Sbjct: 25444017 ctcctccacctcgtcccacgcc 25443996



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 285      ctcctccacctcgtcccacgcc 306
                ||||||||||||||||||||||
Sbjct: 25434274 ctcctccacctcgtcccacgcc 25434253

---

>emb|BX819584.1|CNS0A8ZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB91ZD01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 528

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 283 agctcctccacctcgtcccacgccgc 308
           |||||||||||||||||||| |||||
Sbjct: 256 agctcctccacctcgtcccaagccgc 231

---

>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0711H09
          Length = 185858

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 285   ctcctccacctcgtcccacgcc 306
             ||||||||||||||||||||||
Sbjct: 75333 ctcctccacctcgtcccacgcc 75312



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 285   ctcctccacctcgtcccacgcc 306
             ||||||||||||||||||||||
Sbjct: 65590 ctcctccacctcgtcccacgcc 65569

---

>emb|AJ005284.1|CRAJ5284 Chlamydomonas reinhardtii mRNA for Calvin cycle CP12 protein
           (partial)
          Length = 121

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 277 gcgctgagctcctccacctcgtcccacgcc 306
           |||||||| ||||||||||| |||||||||
Sbjct: 53  gcgctgagttcctccacctcatcccacgcc 24

---

>dbj|AK107793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-D07, full
           insert sequence
          Length = 518

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 285 ctcctccacctcgtcccacgcc 306
           ||||||||||||||||||||||
Sbjct: 248 ctcctccacctcgtcccacgcc 227

---

>gb|AC186169.1| Ornithorhynchus anatinus chromosome UNK clone OABb-2K17, complete
             sequence
          Length = 117478

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 345   ctcctgggcctccttgatgctctcc 369
             ||||| |||||||||||||||||||
Sbjct: 16897 ctcctcggcctccttgatgctctcc 16921

---

>gb|AE009890.1|AE009890 Pyrobaculum aerophilum strain IM2 section 145 of 201 of the complete
            genome
          Length = 12288

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 345  ctcctgggcctccttgatgct 365
            |||||||||||||||||||||
Sbjct: 3524 ctcctgggcctccttgatgct 3504

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 263     cgtggctggccgcggcgctga 283
               |||||||||||||||||||||
Sbjct: 5053704 cgtggctggccgcggcgctga 5053684

---

>ref|NM_106306.2| Arabidopsis thaliana unknown protein AT1G76560 mRNA, complete cds
          Length = 601

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 193 cactcgtcggtctcggggttctccttgcagtagttctcgagcgg 236
           |||||||||||||| || ||||||| |||| |  ||||||||||
Sbjct: 418 cactcgtcggtctctggattctcctggcagaaactctcgagcgg 375

---

>gb|DQ214375.1| Taeniopygia guttata clone 0058P0012B04 HS1 binding protein variant
           1-like mRNA, complete sequence
          Length = 1126

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 285 ctcctccacctcgtcccacgccgc 308
           ||||||| ||||||||||||||||
Sbjct: 207 ctcctcctcctcgtcccacgccgc 184

---

>emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in linkage group 5,
             complete sequence
          Length = 135495

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    agcatttttactacatacat 47
             ||||||||||||||||||||
Sbjct: 62744 agcatttttactacatacat 62725

---

>gb|AC125040.4| Mus musculus BAC clone RP23-335C9 from chromosome 3, complete sequence
          Length = 203863

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   ccgcggcgctgagctcctcc 291
             ||||||||||||||||||||
Sbjct: 60158 ccgcggcgctgagctcctcc 60177

---

>ref|XM_722747.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07055)
            partial mRNA
          Length = 2484

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   tatttcgagcatttttacta 40
            ||||||||||||||||||||
Sbjct: 2131 tatttcgagcatttttacta 2112

---

>ref|XM_666299.1| Plasmodium berghei strain ANKA hypothetical protein (PB301307.00.0)
           partial mRNA
          Length = 465

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  tatttcgagcatttttacta 40
           ||||||||||||||||||||
Sbjct: 394 tatttcgagcatttttacta 375

---

>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7
          Length = 345997

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 171    cgctcagctgtcgtaggtgcggca 194
              ||||||||||||||| ||||||||
Sbjct: 303798 cgctcagctgtcgtaagtgcggca 303775

---

>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence
          Length = 120704

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 286   tcctccacctcgtcccacgccgcc 309
             ||||||||||| ||||||||||||
Sbjct: 40069 tcctccacctcatcccacgccgcc 40046

---

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 380    cggagatgcccgacggcgtg 399
              ||||||||||||||||||||
Sbjct: 858364 cggagatgcccgacggcgtg 858345

---

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 252     cttgtcccgggcgtggctgg 271
               ||||||||||||||||||||
Sbjct: 2575483 cttgtcccgggcgtggctgg 2575464

---

>gb|AC015450.5|AC015450 Arabidopsis thaliana chromosome 1 BAC F14G6 genomic sequence, complete
             sequence
          Length = 100806

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 193   cactcgtcggtctcggggttctccttgcagtagttctcgagcgg 236
             |||||||||||||| || ||||||| |||| |  ||||||||||
Sbjct: 64972 cactcgtcggtctctggattctcctggcagaaactctcgagcgg 64929

---

>gb|AF310675.1|AF310675 Chlamydomonas reinhardtii trans-splicing factor Raa3 gene, complete
            cds; nuclear gene for chloroplast product
          Length = 6360

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  cgtggctggccgcggcgctg 282
            ||||||||||||||||||||
Sbjct: 2742 cgtggctggccgcggcgctg 2761

---

>gb|AF310674.1|AF310674 Chlamydomonas reinhardtii trans-splicing factor Raa3 (raa3) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 5774

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  cgtggctggccgcggcgctg 282
            ||||||||||||||||||||
Sbjct: 2742 cgtggctggccgcggcgctg 2761

---

>gb|BT004753.1| Arabidopsis thaliana At1g76560 gene, complete cds
          Length = 405

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 193 cactcgtcggtctcggggttctccttgcagtagttctcgagcgg 236
           |||||||||||||| || ||||||| |||| |  ||||||||||
Sbjct: 386 cactcgtcggtctctggattctcctggcagaaactctcgagcgg 343

---

>gb|AY085359.1| Arabidopsis thaliana clone 147838 mRNA, complete sequence
          Length = 596

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 193 cactcgtcggtctcggggttctccttgcagtagttctcgagcgg 236
           |||||||||||||| || ||||||| |||| |  ||||||||||
Sbjct: 418 cactcgtcggtctctggattctcctggcagaaactctcgagcgg 375

---

>gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the complete genome
          Length = 11548

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   cgcactccccgctggcggcg 330
             ||||||||||||||||||||
Sbjct: 11501 cgcactccccgctggcggcg 11482

---

>emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, complete sequence
          Length = 240928

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    agcatttttactacatacat 47
             ||||||||||||||||||||
Sbjct: 21571 agcatttttactacatacat 21552


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,551,353
Number of Sequences: 3902068
Number of extensions: 2551353
Number of successful extensions: 52639
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52251
Number of HSP's gapped (non-prelim): 379
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---