>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  302 bits (774), Expect(2) = e-101
 Identities = 148/148 (100%), Positives = 148/148 (100%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR
Sbjct: 280 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 339

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR
Sbjct: 340 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 399

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFYG 273
           VQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 400 VQLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = e-101
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -3

Query: 225 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 112
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  254 bits (649), Expect(2) = 8e-81
 Identities = 118/148 (79%), Positives = 136/148 (91%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALR
Sbjct: 290 LYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALR 349

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKR
Sbjct: 350 ARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKR 409

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFYG 273
           VQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 410 VQLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 8e-81
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -3

Query: 228 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 112
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  247 bits (630), Expect(2) = 6e-79
 Identities = 117/148 (79%), Positives = 133/148 (89%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGALR
Sbjct: 290 LYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALR 349

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKR
Sbjct: 350 ARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKR 409

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFYG 273
           VQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 410 VQLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 6e-79
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 225 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 112
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  246 bits (628), Expect(2) = 1e-77
 Identities = 115/148 (77%), Positives = 133/148 (89%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TD V  E VVK+VD FPGQSIDFFGALR
Sbjct: 288 LYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALR 347

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKR
Sbjct: 348 ARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKR 407

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFYG 273
           VQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 408 VQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 1e-77
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -3

Query: 225 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 118
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  270 bits (690), Expect = 3e-72
 Identities = 126/148 (85%), Positives = 140/148 (94%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALR
Sbjct: 280 LYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALR 339

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKR
Sbjct: 340 ARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKR 399

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFYG 273
           VQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 400 VQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  270 bits (690), Expect = 3e-72
 Identities = 126/148 (85%), Positives = 140/148 (94%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALR
Sbjct: 277 LYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALR 336

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKR
Sbjct: 337 ARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKR 396

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFYG 273
           VQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 397 VQLADKYLSEAALGQANDDAMKTGAFYG 424

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  257 bits (657), Expect = 2e-68
 Identities = 119/148 (80%), Positives = 138/148 (93%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALR
Sbjct: 290 LYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALR 349

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKR
Sbjct: 350 ARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKR 409

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFYG 273
           VQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 410 VQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  256 bits (655), Expect = 4e-68
 Identities = 118/147 (80%), Positives = 138/147 (93%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALR
Sbjct: 286 LYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALR 345

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKR
Sbjct: 346 ARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKR 405

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFY 276
           VQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 406 VQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  256 bits (653), Expect = 6e-68
 Identities = 122/146 (83%), Positives = 136/146 (93%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALR
Sbjct: 294 LYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALR 353

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKR
Sbjct: 354 ARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKR 413

Query: 356 VQLADTYMSQAALGDANQDAMKTGSF 279
           VQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 414 VQLAETYLKEAALGDANADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  254 bits (649), Expect = 2e-67
 Identities = 121/144 (84%), Positives = 136/144 (94%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALR
Sbjct: 289 LYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALR 348

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKR
Sbjct: 349 ARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKR 408

Query: 356 VQLADTYMSQAALGDANQDAMKTG 285
           VQLA+TY+ +AALGDAN DA+ TG
Sbjct: 409 VQLAETYLKEAALGDANADAINTG 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  254 bits (648), Expect = 2e-67
 Identities = 117/146 (80%), Positives = 136/146 (93%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALR
Sbjct: 290 LYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALR 349

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKR
Sbjct: 350 ARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKR 409

Query: 356 VQLADTYMSQAALGDANQDAMKTGSF 279
           VQLAD YMS+AALGDANQDA+K G+F
Sbjct: 410 VQLADKYMSEAALGDANQDAIKRGTF 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  250 bits (638), Expect = 3e-66
 Identities = 120/147 (81%), Positives = 131/147 (89%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALR
Sbjct: 294 LYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALR 353

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKR
Sbjct: 354 ARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKR 413

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFY 276
           VQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 414 VQLADKYLKEAALGDANADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  245 bits (626), Expect = 9e-65
 Identities = 110/147 (74%), Positives = 136/147 (92%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALR
Sbjct: 292 LYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALR 351

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKR
Sbjct: 352 ARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKR 411

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFY 276
           VQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 412 VQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  237 bits (604), Expect = 3e-62
 Identities = 107/147 (72%), Positives = 134/147 (91%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD  PGQSIDFFGALR
Sbjct: 294 LYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALR 353

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKR
Sbjct: 354 ARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKR 413

Query: 356 VQLADTYMSQAALGDANQDAMKTGSFY 276
           VQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 414 VQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  204 bits (520), Expect = 2e-52
 Identities = 94/123 (76%), Positives = 109/123 (88%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALR
Sbjct: 287 LYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALR 346

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKR
Sbjct: 347 ARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKR 406

Query: 356 VQL 348
           V+L
Sbjct: 407 VKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  178 bits (451), Expect = 2e-44
 Identities = 87/133 (65%), Positives = 103/133 (77%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEK+YW PTR+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFGALR
Sbjct: 263 LYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALR 322

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           ARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKR
Sbjct: 323 ARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKR 381

Query: 356 VQLADTYMSQAAL 318
           VQLAD Y+S A L
Sbjct: 382 VQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  146 bits (369), Expect = 5e-35
 Identities = 65/127 (51%), Positives = 90/127 (70%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYW P RD+++G+  GIF  D +S   V K+VD+FP QSIDFF ALR
Sbjct: 163 LYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALR 222

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           +R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  ++ 
Sbjct: 223 SRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIET 282

Query: 356 VQLADTY 336
            QL D Y
Sbjct: 283 SQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  141 bits (355), Expect = 2e-33
 Identities = 64/127 (50%), Positives = 88/127 (69%)
 Frame = -1

Query: 716 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 537
           LYAPLIRDGRMEKFYW P RDD++G+  GIF  D +S   + ++VDTFP QSIDFF ALR
Sbjct: 163 LYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALR 222

Query: 536 ARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKR 357
           +R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V  
Sbjct: 223 SRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDN 282

Query: 356 VQLADTY 336
            QL D Y
Sbjct: 283 SQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -1

Query: 587 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 408
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
 Frame = +3

Query: 276  VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXXEGHGPVP 455
            VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671  VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 456  RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 626
            + +  +A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E 
Sbjct: 729  KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780

Query: 627  -DTLADTDTVVTGGSPVELLHTTITD 701
               L   + V+  G PV   H  + D
Sbjct: 781  WTQLGHNEPVIDAGWPVFDAHALVQD 806

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -1

Query: 443 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 288
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 287 GSFYG*KILHTHPPSLAA 234
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -1

Query: 590 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 411
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 410 KLLEYGHMLVQEQDNVKRV 354
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 504 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 629
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 340 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 444
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -1

Query: 443 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 288
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 287 GSFYG*KILHTHPPSLAA 234
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -1

Query: 506 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 399
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,719,298
Number of Sequences: 219361
Number of extensions: 2040584
Number of successful extensions: 6265
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6262
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7309604013
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)