ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal5h17 |
|---|---|
| Clone Library Name | barley_pub |
>IGA1_HAEIN (P42782) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1| protease) Length = 1541 Score = 38.9 bits (89), Expect = 0.016 Identities = 28/141 (19%), Positives = 60/141 (42%), Gaps = 5/141 (3%) Frame = -2 Query: 698 PATGAETSDALGNKKKQDRSSCGSNTPSSSDVEAEH-----VPENQDQANDKTQQACCSN 534 PAT +ET++ + KQ+ + N +++ A++ ++ +AN +T + S Sbjct: 1030 PATPSETTETVAENSKQESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSG 1089 Query: 533 SSAGDMNHRRFRNISSTNDSWKEVSEEGRMAFDKLFSRGKLPQSFSPPQAEGLKVVPRGE 354 S + + ++ E E+ ++ +K K+ SP Q + V P+ E Sbjct: 1090 SETKETQTTETKETATV-----EKEEKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAE 1144 Query: 353 QDEATTVTVDLNKSAAASNLT 291 TV++ + + +N T Sbjct: 1145 PARENDPTVNIKEPQSQTNTT 1165
>IGA3_HAEIN (P45385) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1| protease) Length = 1545 Score = 38.9 bits (89), Expect = 0.016 Identities = 28/141 (19%), Positives = 60/141 (42%), Gaps = 5/141 (3%) Frame = -2 Query: 698 PATGAETSDALGNKKKQDRSSCGSNTPSSSDVEAEH-----VPENQDQANDKTQQACCSN 534 PAT +ET++ + KQ+ + N +++ A++ ++ +AN +T + S Sbjct: 1034 PATPSETTETVAENSKQESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSG 1093 Query: 533 SSAGDMNHRRFRNISSTNDSWKEVSEEGRMAFDKLFSRGKLPQSFSPPQAEGLKVVPRGE 354 S + + ++ E E+ ++ +K K+ SP Q + V P+ E Sbjct: 1094 SETKETQTTETKETATV-----EKEEKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAE 1148 Query: 353 QDEATTVTVDLNKSAAASNLT 291 TV++ + + +N T Sbjct: 1149 PARENDPTVNIKEPQSQTNTT 1169
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 37.7 bits (86), Expect = 0.035 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Frame = -2 Query: 692 TGAETSDALGNKKKQDRSSCGSNT---PSSSDVEAEHVPENQDQANDKTQQACCSNSSAG 522 T + +D L + + S+ G ++ PSSS V + V ++ +D + S+SSA Sbjct: 58 TSSSATDILSSITQSASSTSGVSSSVGPSSSSVVSSSVSQSSSSVSDVSSSVSQSSSSAS 117 Query: 521 DMNHRRFRNISSTNDSWKEVSEEGRMAFD 435 D++ ++ SST+D VS+ A D Sbjct: 118 DVSSSVSQSASSTSDVSSSVSQSSSSASD 146 Score = 35.8 bits (81), Expect = 0.13 Identities = 33/136 (24%), Positives = 58/136 (42%) Frame = -2 Query: 704 TTPATGAETSDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDKTQQACCSNSSA 525 ++ A+ +S + D SS S + SS+ + V ++ A+D + S SSA Sbjct: 113 SSSASDVSSSVSQSASSTSDVSSSVSQSSSSASDVSSSVSQSSSSASDVSSSVSQSASSA 172 Query: 524 GDMNHRRFRNISSTNDSWKEVSEEGRMAFDKLFSRGKLPQSFSPPQAEGLKVVPRGEQDE 345 D++ ++ SST+D VS+ A D + S S + V Q Sbjct: 173 SDVSSSVSQSASSTSDVSSSVSQSSSSASD-------VSSSVSQSSSSASDVSSSVSQSA 225 Query: 344 ATTVTVDLNKSAAASN 297 ++T V + S +AS+ Sbjct: 226 SSTSDVSSSVSQSASS 241
>ATRX_RAT (P70486) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked nuclear protein) (pABP-2) (Fragment) Length = 527 Score = 34.3 bits (77), Expect = 0.39 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 13/152 (8%) Frame = -2 Query: 683 ETSDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDKTQQACCSNSSAGDMNHR- 507 E D + +++ SS GS PS + E H PE++ K + + + Sbjct: 6 EFGDMVCKRQQSAVSSAGSEKPSGKE-ENVHSPEDKRVTKSKEKSKHLRTRTGRKVKSDV 64 Query: 506 --RFRNISSTNDSWKEVSEEGRMAFDKLFSRGKLPQSFSPPQ----------AEGLKVVP 363 RFR +++S + ++GR + +RGK + ++G + +P Sbjct: 65 TDRFRKKEQSSESSEGEKKQGRQ---RTGTRGKKSTDLKEEKVKREREYESSSDGTEKLP 121 Query: 362 RGEQDEATTVTVDLNKSAAASNLTRGARWKQR 267 GE+ + V NK+ +G +WK + Sbjct: 122 EGEEIGLFSKGVKQNKNDTTDEAKKGKKWKDK 153
>DNAJ3_ARATH (Q94AW8) Chaperone protein dnaJ 3 (AtJ3) (AtDjA3)| Length = 420 Score = 33.9 bits (76), Expect = 0.51 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 9/61 (14%) Frame = -2 Query: 479 DSWKEVSEEGRMAFDKLFSRGKL--------PQSFSPPQAEGLK-VVPRGEQDEATTVTV 327 DS+K +S+EG + + F +GKL P S SP Q + L+ V+P+ + + + + Sbjct: 312 DSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEI 371 Query: 326 D 324 D Sbjct: 372 D 372
>GZF3_YEAST (P42944) Protein GZF3| Length = 551 Score = 33.9 bits (76), Expect = 0.51 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Frame = -2 Query: 662 NKKKQDRSSCGSNTPSSSDVEAEHV-PENQDQANDKTQQACCSNSSAGDMNHRRFRN-IS 489 N K S+ G +P ++ + H+ P+NQ + N +T A C+N+ + D N +N ++ Sbjct: 79 NDKSFSTSTAGRMSPDTNSLH--HILPKNQVKNNGQTMDANCNNNVSNDANVPVCKNCLT 136 Query: 488 STNDSWKEVSEEGRM 444 ST W+ E G M Sbjct: 137 STTPLWRR-DEHGAM 150
>DNAJ2_ARATH (P42825) Chaperone protein dnaJ 2 (AtDjA2)| Length = 419 Score = 33.1 bits (74), Expect = 0.87 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 9/61 (14%) Frame = -2 Query: 479 DSWKEVSEEGRMAFDKLFSRGKL--------PQSFSPPQAEGLK-VVPRGEQDEATTVTV 327 DS+K +S+EG + + F +GKL P+S SP Q + ++ V+P+ + + + + Sbjct: 313 DSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEI 372 Query: 326 D 324 D Sbjct: 373 D 373
>DNJH1_ALLPO (Q03363) DnaJ protein homolog 1 (DNAJ-1) (Fragment)| Length = 397 Score = 33.1 bits (74), Expect = 0.87 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 9/61 (14%) Frame = -2 Query: 479 DSWKEVSEEGRMAFDKLFSRGKL--------PQSFSPPQAEGLK-VVPRGEQDEATTVTV 327 D +K +++EG + + F RGKL P S +P Q + ++ V+PR + T + + Sbjct: 291 DQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEI 350 Query: 326 D 324 D Sbjct: 351 D 351
>RPB1_PLAFD (P14248) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 2452 Score = 32.0 bits (71), Expect = 1.9 Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 2/140 (1%) Frame = -2 Query: 662 NKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDKT--QQACCSNSSAGDMNHRRFRNIS 489 NKK + +S SNT DV+ ++ +N D +D T + + N + Sbjct: 1791 NKKSGNNNSNNSNTYDDGDVDNDNDDDNDDNKSDITIKEDNDVAFMKTSTKNAEEDLELK 1850 Query: 488 STNDSWKEVSEEGRMAFDKLFSRGKLPQSFSPPQAEGLKVVPRGEQDEATTVTVDLNKSA 309 + N +S E + F + + Q S + G++ + + E + +T D + Sbjct: 1851 NKNHIEHNISREDT---EDTFLKKLMEQCLSTLKLRGIENITKVYMREESKITYDSDN-- 1905 Query: 308 AASNLTRGARWKQRRIGCRL 249 R + W GC L Sbjct: 1906 --GKFVRSSHWVLDTDGCNL 1923
>IGA2_HAEIN (P45384) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1| protease) Length = 1702 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/114 (19%), Positives = 49/114 (42%), Gaps = 8/114 (7%) Frame = -2 Query: 698 PATGAETSDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQD-----QANDKTQQACCSN 534 PAT +ET++ + KQ+ + N +++ A++ ++ +AN +T + S Sbjct: 1035 PATPSETTETVAENSKQESKTVEKNEQDATETTAQNGEVAEEAKPSVKANTQTNEVAQSG 1094 Query: 533 SSAGDMNHRRFRNISSTNDSWK---EVSEEGRMAFDKLFSRGKLPQSFSPPQAE 381 S + + + K E E+ ++ D++ ++ SP QA+ Sbjct: 1095 SETEETQTTEIKETAKVEKEEKAKVEKEEKAKVEKDEIQEAPQMASETSPKQAK 1148
>YHJ1_YEAST (P38766) Hypothetical ATP-dependent helicase YHR031C (EC 3.6.1.-)| Length = 723 Score = 32.0 bits (71), Expect = 1.9 Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 11/137 (8%) Frame = -2 Query: 677 SDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDKTQQACCSNSSAGDMNHRRFR 498 S A GNKK+ + S +TP++S A + Q C S+A N Sbjct: 4 SHASGNKKQWSKRSSNGSTPAAS---ASGSHAYRQQTLSSFFMGCGKKSAAASKNSTTII 60 Query: 497 NISSTNDSWKEVSEEGRMAF-----DKLFSRGKLPQSFSPPQAEGLKV--VPR----GEQ 351 ++ S ++ + ++ R LFS+ + P AE K+ VPR + Sbjct: 61 DLESGDEGNRNITAPPRPRLIRNNSSSLFSQSQGSFGDDDPDAEFKKLVDVPRLNSYKKS 120 Query: 350 DEATTVTVDLNKSAAAS 300 + ++T L+K+A+AS Sbjct: 121 SRSLSMTSSLHKTASAS 137
>ARHGC_HUMAN (Q9NZN5) Rho guanine nucleotide exchange factor 12| (Leukemia-associated RhoGEF) Length = 1544 Score = 31.6 bits (70), Expect = 2.5 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 424 LNSLSKAIRPSSETSFHESFVLEMFLNLRWFMSPAEELLQHA 549 LN KA+R +ETS + ++ L WF P EE L+HA Sbjct: 845 LNEQMKAVRKRNETSVIDQIGEDL---LTWFSGPGEEKLKHA 883
>Y609_ENCCU (Q8SVF3) Hypothetical protein ECU06_0090| Length = 606 Score = 31.6 bits (70), Expect = 2.5 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = -2 Query: 659 KKKQDRSSCGSNTPSSSDVEAEHVPENQD-QANDKTQQACCSNSSAGDMNH--RRFRNIS 489 K+K + GS P + E E V EN++ Q + +++AC + N R + + Sbjct: 357 KRKSKKKKKGSKKPEEKESEVEEVSENREAQEMEDSREACSKERNKEQKNESGRCYYKLH 416 Query: 488 STNDSWKEVSEEGRMAFD 435 W+E E+ + +D Sbjct: 417 KRTLLWREEPEKIKKKWD 434
>DNL1_RAT (Q9JHY8) DNA ligase 1 (EC 6.5.1.1) (DNA ligase I)| (Polydeoxyribonucleotide synthase [ATP] 1) Length = 918 Score = 31.6 bits (70), Expect = 2.5 Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 9/154 (5%) Frame = -2 Query: 707 ETTPATGAETSDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDKTQQACCSNSS 528 +T + + A+ +KK+D TP S EAE V + ++Q D+ S Sbjct: 136 DTLEEPNEDKAKAVKKRKKED-----PQTPPESLTEAEEVNQKEEQVEDQPTVPPEPTES 190 Query: 527 AGDMNHRRFRNISSTNDSWKEVSEEGRMAFDKLFSRGKLP-QSFSPPQAEGLKV------ 369 + + NI K+ +E + K +RG P SF P+ +K Sbjct: 191 PESVTLTKTENIPMCKAGVKQKPQEEEQS--KPPARGAKPLSSFFTPRKPAVKTEVKQEE 248 Query: 368 --VPRGEQDEATTVTVDLNKSAAASNLTRGARWK 273 PR E+ + + N S + + A WK Sbjct: 249 SDTPRKEETKGAPDPTNYNPSKSNYHPIEDACWK 282
>UBP20_HUMAN (Q9Y2K6) Ubiquitin carboxyl-terminal hydrolase 20 (EC 3.1.2.15)| (Ubiquitin thioesterase 20) (Ubiquitin-specific-processing protease 20) (Deubiquitinating enzyme 20) Length = 913 Score = 31.2 bits (69), Expect = 3.3 Identities = 19/49 (38%), Positives = 24/49 (48%) Frame = -2 Query: 470 KEVSEEGRMAFDKLFSRGKLPQSFSPPQAEGLKVVPRGEQDEATTVTVD 324 KEV E R+A L S K + SPP + LK VP DE + + D Sbjct: 88 KEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLKAVPIAVADEGESESED 136
>IGA0_HAEIN (P44969) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1| protease) Length = 1694 Score = 30.8 bits (68), Expect = 4.3 Identities = 21/111 (18%), Positives = 48/111 (43%), Gaps = 5/111 (4%) Frame = -2 Query: 698 PATGAETSDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQD-----QANDKTQQACCSN 534 PAT +ET++ + KQ+ + N +++ A++ ++ +AN +T + S Sbjct: 1035 PATPSETTETVAENSKQESKTVEKNEQDATETTAQNGEVAEEAKPSVKANTQTNEVAQSG 1094 Query: 533 SSAGDMNHRRFRNISSTNDSWKEVSEEGRMAFDKLFSRGKLPQSFSPPQAE 381 S + + + E E+ ++ D++ ++ SP QA+ Sbjct: 1095 SETEETQTTEIKETAKV-----EKEEKAKVEKDEIQEAPQMASETSPKQAK 1140
>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding| factor 1-A) (UBF-1-A) (xUBF-1) Length = 677 Score = 30.8 bits (68), Expect = 4.3 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = -2 Query: 683 ETSDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQ--ANDKTQQACCSNSSAGDMNH 510 E D ++ K+D S G ++ SSSD ++E EN+D+ D+ ++ ++ +G + Sbjct: 605 EDDDDDEDEDKEDSSEDGDSSESSSDEDSEDGEENEDEEGEEDEDEEEDDDDNESGSSSS 664 Query: 509 RRFRNISSTNDS 474 SS +DS Sbjct: 665 SSSSADSSDSDS 676
>SSN6_YEAST (P14922) Glucose repression mediator protein| Length = 966 Score = 30.8 bits (68), Expect = 4.3 Identities = 26/120 (21%), Positives = 50/120 (41%) Frame = -2 Query: 704 TTPATGAETSDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDKTQQACCSNSSA 525 T PA + D + K++ + ++ PS+ + E P A + + + + Sbjct: 860 TVPAEASPVEDEVRQHSKEENGTTEASAPSTEEAE----PAASRDAEKQQDETAATTITV 915 Query: 524 GDMNHRRFRNISSTNDSWKEVSEEGRMAFDKLFSRGKLPQSFSPPQAEGLKVVPRGEQDE 345 I T ++ + V EE +M ++ S+ K PQ + P+ VV + E+DE Sbjct: 916 ----------IKPTLETMETVKEEAKMREEEQTSQEKSPQENTLPRE---NVVRQVEEDE 962
>DNJH2_ALLPO (P42824) DnaJ protein homolog 2| Length = 418 Score = 30.8 bits (68), Expect = 4.3 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 9/61 (14%) Frame = -2 Query: 479 DSWKEVSEEGRMAFDKLFSRGKL--------PQSFSPPQAEGLK-VVPRGEQDEATTVTV 327 D +K +++EG + + F RGKL P S +P Q + L+ V+P T + + Sbjct: 312 DQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEI 371 Query: 326 D 324 D Sbjct: 372 D 372
>UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstream binding| factor 1-B) (UBF-1-B) (xUBF-2) Length = 701 Score = 30.8 bits (68), Expect = 4.3 Identities = 14/42 (33%), Positives = 26/42 (61%) Frame = -2 Query: 683 ETSDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDK 558 E D ++ K+D S G ++ SSSD ++E EN+D+ +++ Sbjct: 627 EDDDDDDDEDKEDSSEDGDSSDSSSDEDSEEGEENEDEEDEE 668
>T2FA_XENLA (Q04870) Transcription initiation factor IIF alpha subunit (EC| 2.7.11.1) (TFIIF-alpha) (Transcription initiation factor RAP74) Length = 524 Score = 30.8 bits (68), Expect = 4.3 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = -2 Query: 701 TPATG--AETSDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDKTQQACCSNSS 528 +P TG + T A +K +Q + SNTP++ ++ E P+N + Q+ S S Sbjct: 396 SPDTGNTSSTLRAAASKLEQSKRGTVSNTPAAKRLKMEAGPQNTSGKSTPQPQSGKSTPS 455 Query: 527 AGDM 516 +GD+ Sbjct: 456 SGDI 459
>ARHGC_MOUSE (Q8R4H2) Rho guanine nucleotide exchange factor 12| (Leukemia-associated RhoGEF) Length = 1543 Score = 30.8 bits (68), Expect = 4.3 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +1 Query: 424 LNSLSKAIRPSSETSFHESFVLEMFLNLRWFMSPAEELLQHA 549 LN KA+R +ETS + ++ + WF P EE L+HA Sbjct: 845 LNEQMKAVRKRNETSVIDHIGEDLLI---WFSGPGEEKLKHA 883
>YL278_YEAST (Q05854) Putative transcriptional regulatory protein YLR278C| Length = 1341 Score = 30.4 bits (67), Expect = 5.7 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = -2 Query: 614 SSDVEAEHVPENQDQANDKTQQACCSNSSAGDMNHRRFRNISSTNDSWKEVSEEGRM--A 441 +S V P+N ND+ +A S + D N N+S++ND K +S G M A Sbjct: 750 ASSVAKRTEPKN---INDEANKAISSGDTLHDSNSANAANLSNSND--KNISHNGGMPPA 804 Query: 440 FDKLFSRGK 414 ++F +G+ Sbjct: 805 VARIFGKGQ 813
>VIT_ACITR (Q90243) Vitellogenin precursor (VTG) [Contains: Lipovitellin I| (LVI); Phosvitin (PV); Lipovitellin II (LVII)] (Fragment) Length = 1677 Score = 30.4 bits (67), Expect = 5.7 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Frame = -2 Query: 683 ETSDAL--GNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDKTQQACCSNSSAGDMNH 510 ET D+ G K++ SS S++ SSS + Q + + +Q + + D +H Sbjct: 1084 ETQDSTLRGFKRRSSSSSSSSSSSSSSSSSSSSSSSQQSRMEKRMEQDKLTENLERDRDH 1143 Query: 509 RRFRNISSTNDSWK 468 R + + WK Sbjct: 1144 MRGKQSKNKKQEWK 1157
>MUTS_BUCAI (P57504) DNA mismatch repair protein mutS| Length = 802 Score = 30.4 bits (67), Expect = 5.7 Identities = 9/28 (32%), Positives = 19/28 (67%) Frame = +1 Query: 214 VKANPFGTNLVSSRHPILLCFHRAPLVR 297 + + +G +L+ SRHP++ CF + P ++ Sbjct: 574 IMSEKYGISLLESRHPVVECFLKTPFIK 601
>SCC3_SCHPO (O13816) Cohesin subunit psc3 (SCC3 homolog)| Length = 962 Score = 30.4 bits (67), Expect = 5.7 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = +1 Query: 406 WGSFPLLNSLSKAIRPSSETSFHESFVLEMFLNLRWFMSPAEELLQHACCVLSLA*SW 579 W F + L + +R S ++SF +L +F F++P + L +AC + S+ SW Sbjct: 472 WIKFSQMCKLLEEVRLSYQSSFDYDTLLRIFQKNGNFITPITQALLNACEIDSIYQSW 529
>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin| phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 1253 Score = 30.4 bits (67), Expect = 5.7 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Frame = -2 Query: 716 DKAETTPATGAETSDALGNKKKQD--RSSCGSNTPSSSDVEAEHVPENQDQANDKTQQAC 543 D +++T T S+ GN D +S G SSD ++ + D ++ + Sbjct: 513 DDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSS 572 Query: 542 CSNSSAGDMNHRRFRNISSTNDS 474 SNSS+ + + SS +DS Sbjct: 573 DSNSSSDSDSSDSDSSDSSDSDS 595
>DBP6_DEBHA (Q6BPT8) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 679 Score = 30.0 bits (66), Expect = 7.4 Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Frame = -2 Query: 716 DKAETTPATGAET---SDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDKTQQA 546 D+ ++ ++G+++ SD+ + S S++ SSS+ E+E PE++ + D + + Sbjct: 38 DEETSSSSSGSDSDSSSDSSSDSSSDSSSESDSDSDSSSESESESEPESESGSQDSKKSS 97 Query: 545 CCSNSS 528 S+S+ Sbjct: 98 SESDSA 103
>MSA2_PLAF2 (Q03646) Merozoite surface antigen 2 precursor (MSA-2)| Length = 347 Score = 30.0 bits (66), Expect = 7.4 Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 19/106 (17%) Frame = -2 Query: 716 DKAETTPATGAETSDALGNKKKQDRSS------CGSNTPSSSDV----------EAEHVP 585 + AET P E NK+ Q+ S+ SN P + D +AE+ Sbjct: 201 NNAETNPKGNGEVQPNQANKETQNNSNVQQDSQTKSNVPRTQDADTKSPTAQPEQAENSA 260 Query: 584 ENQDQANDKTQQACCSNSSAGDMNH---RRFRNISSTNDSWKEVSE 456 +Q Q+ N G H R + +T+DS KE ++ Sbjct: 261 PTAEQTESPELQSAPENKGTGQHGHMHGSRNNHPQNTSDSQKECTD 306
>ABRU_DROME (Q24174) Protein abrupt (Protein clueless)| Length = 904 Score = 29.6 bits (65), Expect = 9.7 Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 6/143 (4%) Frame = -2 Query: 695 ATGAETSDALGNKKKQDRSSCGSNTPSSSDVEAE-HVPENQDQANDKTQQACCSNSSAGD 519 A +S+ N + S +N ++++ E+ H + + ++T AC ++S++ Sbjct: 202 ALSHNSSNNNNNNSSSNNSLSNNNNNNNNNAESSNHNKISSYLSPNQTSAACNNSSNSNS 261 Query: 518 MNHRRFRNISSTNDSWKEVSEEGRMAFDKLFSRGKLP-----QSFSPPQAEGLKVVPRGE 354 NH N SS+N+ +S + + FS ++P S + A + Sbjct: 262 NNHSSSHNNSSSNN----ISGSLNSSLNSPFSAPQIPPPVTASSAAAAAAAAASLTAAVA 317 Query: 353 QDEATTVTVDLNKSAAASNLTRG 285 A T + S+AAS T G Sbjct: 318 AAAAATAASAGSSSSAASGQTSG 340
>VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (VTG I) [Contains:| Lipovitellin-1 (LV1); Phosvitin (PV); Lipovitellin-2 (LV2)] Length = 1704 Score = 29.6 bits (65), Expect = 9.7 Identities = 21/97 (21%), Positives = 41/97 (42%) Frame = -2 Query: 686 AETSDALGNKKKQDRSSCGSNTPSSSDVEAEHVPENQDQANDKTQQACCSNSSAGDMNHR 507 A T+ + + ++ RSS S++ SSS + ++ ++++ S+SS+ + R Sbjct: 1118 ARTNSSSSSSSRRSRSSSSSSSSSSS---------SSSSSSSSSRRSSSSSSSSSSSSSR 1168 Query: 506 RFRNISSTNDSWKEVSEEGRMAFDKLFSRGKLPQSFS 396 R ++ST S + FS S S Sbjct: 1169 SSRRVNSTRSSSSSSRTSSASSLASFFSDSSSSSSSS 1205 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,254,331 Number of Sequences: 219361 Number of extensions: 2255401 Number of successful extensions: 6419 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 6076 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6401 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
