>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 73/85 (85%), Gaps = 2/85 (2%)
 Strand = Plus / Minus

                                                                            
Query: 259      gccttgctttgcaatgagtaaaattagccttgaaacctccggaaggacaaacccatgttc 318
                |||||||||||||| | ||| || ||||||||||||||| ||||||||| |||||  |||
Sbjct: 12549546 gccttgctttgcaaag-gtacaa-tagccttgaaacctcaggaaggacatacccacattc 12549489

                                         
Query: 319      ggtgctgcttcaaaattccgctgct 343
                 | ||||||||||||| || |||||
Sbjct: 12549488 agcgctgcttcaaaatcccactgct 12549464

>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0041C07
          Length = 179047

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 73/85 (85%), Gaps = 2/85 (2%)
 Strand = Plus / Minus

                                                                         
Query: 259   gccttgctttgcaatgagtaaaattagccttgaaacctccggaaggacaaacccatgttc 318
             |||||||||||||| | ||| || ||||||||||||||| ||||||||| |||||  |||
Sbjct: 15484 gccttgctttgcaaag-gtacaa-tagccttgaaacctcaggaaggacatacccacattc 15427

                                      
Query: 319   ggtgctgcttcaaaattccgctgct 343
              | ||||||||||||| || |||||
Sbjct: 15426 agcgctgcttcaaaatcccactgct 15402

>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0711A01
          Length = 162400

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 73/85 (85%), Gaps = 2/85 (2%)
 Strand = Plus / Minus

                                                                         
Query: 259   gccttgctttgcaatgagtaaaattagccttgaaacctccggaaggacaaacccatgttc 318
             |||||||||||||| | ||| || ||||||||||||||| ||||||||| |||||  |||
Sbjct: 64873 gccttgctttgcaaag-gtacaa-tagccttgaaacctcaggaaggacatacccacattc 64816

                                      
Query: 319   ggtgctgcttcaaaattccgctgct 343
              | ||||||||||||| || |||||
Sbjct: 64815 agcgctgcttcaaaatcccactgct 64791

>emb|AL512639.8| Human DNA sequence from clone RP11-346G21 on chromosome 9, complete
             sequence
          Length = 164774

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 167   caaattatatctacaaatgtt 187
             |||||||||||||||||||||
Sbjct: 83887 caaattatatctacaaatgtt 83907

>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold
          Length = 489372

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    acacacacgcacactgaagag 59
             |||||||||||||||||||||
Sbjct: 19570 acacacacgcacactgaagag 19550

>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 18      aatcctgttccatctaaatca 38
               |||||||||||||||||||||
Sbjct: 1219757 aatcctgttccatctaaatca 1219737

>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     catctgcagctatatataca 84
              ||||||||||||||||||||
Sbjct: 248648 catctgcagctatatataca 248667

>gb|BC044543.1| Danio rerio histone deacetylase 3, mRNA (cDNA clone MGC:55927
            IMAGE:3819179), complete cds
          Length = 2069

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  gcttcaaaattccgctgctt 344
            ||||||||||||||||||||
Sbjct: 988  gcttcaaaattccgctgctt 1007

>gb|AC125262.9| Mus musculus chromosome 8, clone RP24-314K18, complete sequence
          Length = 185119

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   actgaagagctgcacatctg 70
            ||||||||||||||||||||
Sbjct: 1769 actgaagagctgcacatctg 1750

>gb|AC123728.8| Mus musculus chromosome 3, clone RP23-453L19, complete sequence
          Length = 161887

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gatgcaataccaaattatat 176
             ||||||||||||||||||||
Sbjct: 86710 gatgcaataccaaattatat 86729

>ref|NM_200990.1| Danio rerio histone deacetylase 3 (hdac3), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  gcttcaaaattccgctgctt 344
            ||||||||||||||||||||
Sbjct: 988  gcttcaaaattccgctgctt 1007

>emb|AL139318.9| Human DNA sequence from clone RP11-124B17 on chromosome 13 Contains the
              DCT gene for dopachrome tautomerase (dopachrome
              delta-isomerase, tyrosine-related protein 2) (TYRP2), the
              3' end of the gene for dTDP-D-glucose 4,6-dehydratase
              (TDPGD) and a CpG island, complete sequence
          Length = 160004

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    aaattatatctacaaatgtt 187
              ||||||||||||||||||||
Sbjct: 133745 aaattatatctacaaatgtt 133726

>emb|AL031765.1|DMC22E5 Drosophila melanogaster cosmid clone 22E5
          Length = 45672

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    ctgcacatctgcagctatat 79
             ||||||||||||||||||||
Sbjct: 13110 ctgcacatctgcagctatat 13091

>emb|CR354536.8| Zebrafish DNA sequence from clone DKEY-101K8 in linkage group 17,
             complete sequence
          Length = 157228

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   gcttcaaaattccgctgctt 344
             ||||||||||||||||||||
Sbjct: 84121 gcttcaaaattccgctgctt 84102

>emb|CR385090.8| Zebrafish DNA sequence from clone CH211-245M19 in linkage group 5,
             complete sequence
          Length = 140222

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   ttgctttgcaatgagtaaaattag 285
             |||||||||||||| |||||||||
Sbjct: 59535 ttgctttgcaatgattaaaattag 59512

>emb|BX897670.7| Zebrafish DNA sequence from clone DKEY-117L15 in linkage group 8,
             complete sequence
          Length = 107559

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   ttgctttgcaatgagtaaaattag 285
             |||||||||||||| |||||||||
Sbjct: 22573 ttgctttgcaatgattaaaattag 22550

>gb|AY121660.1| Drosophila melanogaster RE06985 full insert cDNA
          Length = 2957

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   ctgcacatctgcagctatat 79
            ||||||||||||||||||||
Sbjct: 1114 ctgcacatctgcagctatat 1133

>gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 169618

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     ctgcacatctgcagctatat 79
              ||||||||||||||||||||
Sbjct: 153718 ctgcacatctgcagctatat 153699

>ref|NM_130614.2| Drosophila melanogaster CG4322-RA (CG4322), mRNA
          Length = 2941

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   ctgcacatctgcagctatat 79
            ||||||||||||||||||||
Sbjct: 1114 ctgcacatctgcagctatat 1133

>gb|AC073607.19| Homo sapiens 12 BAC RP11-462G20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 165085

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    ctgttccatctaaatcaaca 41
             ||||||||||||||||||||
Sbjct: 32566 ctgttccatctaaatcaaca 32585

>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 177724

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    ctgcacatctgcagctatat 79
             ||||||||||||||||||||
Sbjct: 20143 ctgcacatctgcagctatat 20124

>ref|XM_697331.1| PREDICTED: Danio rerio hypothetical protein LOC554392 (LOC554392),
           mRNA
          Length = 1873

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 gcttcaaaattccgctgctt 344
           ||||||||||||||||||||
Sbjct: 800 gcttcaaaattccgctgctt 819

>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
              sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 1      tctgaattncaaggagcaatcct 23
              |||||||| ||||||||||||||
Sbjct: 310324 tctgaattccaaggagcaatcct 310302

>gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 of 74 of the complete
              sequence
          Length = 300933

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     ctgcacatctgcagctatat 79
              ||||||||||||||||||||
Sbjct: 280695 ctgcacatctgcagctatat 280676

>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
              chromosome I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 1      tctgaattncaaggagcaatcct 23
              |||||||| ||||||||||||||
Sbjct: 309192 tctgaattccaaggagcaatcct 309170

>gb|AC115018.7| Mus musculus chromosome 3, clone RP24-221D2, complete sequence
          Length = 164720

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   aataccaaattatatctaca 181
             ||||||||||||||||||||
Sbjct: 87448 aataccaaattatatctaca 87467

>emb|BX000526.8| Zebrafish DNA sequence from clone BUSM1-87D10 in linkage group 14,
             complete sequence
          Length = 94928

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   gcttcaaaattccgctgctt 344
             ||||||||||||||||||||
Sbjct: 78311 gcttcaaaattccgctgctt 78330

>gb|AC169518.1| Mus musculus chromosome 8, clone RP23-454H8, complete sequence
          Length = 194822

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    actgaagagctgcacatctg 70
             ||||||||||||||||||||
Sbjct: 53607 actgaagagctgcacatctg 53588


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,775,863
Number of Sequences: 3902068
Number of extensions: 3775863
Number of successful extensions: 119007
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118750
Number of HSP's gapped (non-prelim): 257
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)