| Clone Name | rbaal5h02 |
|---|---|
| Clone Library Name | barley_pub |
>DEFA_AEDAE (P91793) Defensin-A precursor (AaDef)| Length = 98 Score = 31.6 bits (70), Expect = 0.52 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = +3 Query: 30 AAVSCQPQHPCLKPGARRFALGLVALLPQFLVSRRVSLYLAEKKLCHLPSAFGL 191 A S PQ P L AR FA L LP+ V + ++ C L S FG+ Sbjct: 16 AITSAYPQEPVLADEARPFANSLFDELPEETYQAAVENFRLKRATCDLLSGFGV 69
>PARP1_HUMAN (P09874) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1)| (ADPRT) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) Length = 1013 Score = 30.8 bits (68), Expect = 0.89 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = -3 Query: 153 QQDIVKPSDSQGTVAATPPAPERSAEPQVSNKDAAVDR 40 +QD + P ++ +VAATPP P ++ P N A+ D+ Sbjct: 351 KQDRIFPPETSASVAATPP-PSTASAPAAVNSSASADK 387
>GP125_HUMAN (Q8IWK6) Probable G-protein coupled receptor 125 precursor| Length = 1321 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -3 Query: 171 GDRASSQQDIVKPSDSQGTVAATPPAPERSAEPQVSNKDAA 49 G + S Q V+P +S GT P P SAE +NK A+ Sbjct: 1064 GRSSYSVQVNVQPPNSNGTNGEAPKCPNSSAESSCTNKSAS 1104
>CLCNX_USTMA (P0C197) Probable chloride channel protein UM03490-D| Length = 1131 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +3 Query: 24 WSAAVSCQPQHPCLKPGARRFALGLVALL 110 WS +CQP PC+ PG F LG A L Sbjct: 633 WSLFSACQPDVPCITPGTYAF-LGAAAAL 660
>GLB1_CHLEU (Q08753) Globin LI637| Length = 164 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Frame = -3 Query: 156 SQQDIVKPSDSQGTVAATPPAPERSAEPQVSNK-------DAAVDR 40 +QQ V+PS S AAT PAP R + K +AAVD+ Sbjct: 16 AQQQPVRPSTSATAAAATAPAPARKCPSSLFAKLGGREAVEAAVDK 61
>NOL3_RAT (Q62881) Nucleolar protein 3| Length = 221 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -3 Query: 165 RASSQQDIVKPSDSQGTVAATPPAPERSAE 76 RAS +++I P DS+ TP PE AE Sbjct: 129 RASEEEEIGGPEDSEAVQPRTPEEPELEAE 158
>CYPC_STRHA (Q05368) Putative polyketide cyclase (Fragment)| Length = 109 Score = 27.7 bits (60), Expect = 7.5 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -2 Query: 259 ER*PRVPGEKAS*EREEKDGERV------SPKAEGR*QSFFSARYSETLRLTRNCGSNAT 98 E PR+ E AS E E++G+RV P EGR S+ S R ++ LT T Sbjct: 26 ENWPRLFSEYASAEILEREGDRVRFRLTMHPDDEGRVWSWVSERVADRASLTVRAHRVET 85 Query: 97 SP 92 P Sbjct: 86 GP 87
>GAP2_DROME (Q8T498) Probable Ras GTPase-activating protein| Length = 1556 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = -1 Query: 137 NPPTHKELWQQRHQPQSEAPSPRFQTRMLRLTGHRRRP 24 N PT L QQ+ Q Q + + Q + L+ GH+++P Sbjct: 826 NDPTVNGLLQQQQQQQQQQQQQQQQHQQLQQHGHQQQP 863
>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) Length = 659 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -1 Query: 122 KELWQQRHQPQSEAPSPRFQTRMLRLTGHRRRPRK*RSNS 3 +E W++++ QS +PSPR+ + RRR R RS S Sbjct: 619 REEWERQYSRQSRSPSPRYSR---EYSSSRRRSRS-RSRS 654
>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -1 Query: 122 KELWQQRHQPQSEAPSPRFQTRMLRLTGHRRRPRK*RSNS 3 +E W++++ QS +PSPR+ + RRR R RS S Sbjct: 613 REEWERQYSRQSRSPSPRYSR---EYSSSRRRSRS-RSRS 648 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,307,647 Number of Sequences: 219361 Number of extensions: 560532 Number of successful extensions: 2358 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2271 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2358 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)