ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal5g18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467076.1| Oryza sativa (japonica cultivar-group), mRNA 434 e-118
2dbj|AK099767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
3dbj|AK061454.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
4dbj|AK058796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 418 e-113
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
6dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
7dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
8gb|BT013273.1| Lycopersicon esculentum clone 134850R, mRNA sequence 133 9e-28
9emb|BX831630.1|CNS09ZP5 Arabidopsis thaliana Full-length cDNA Co... 94 8e-16
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 88 5e-14
11dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic D... 88 5e-14
12ref|NM_203246.1| Arabidopsis thaliana unknown protein AT5G61670 ... 86 2e-13
13ref|NM_125561.2| Arabidopsis thaliana unknown protein AT5G61670 ... 86 2e-13
14gb|AY149953.1| Arabidopsis thaliana At5g61670/k11j9_190 mRNA, co... 86 2e-13
15gb|AY117226.1| Arabidopsis thaliana unknown protein (At5g61670) ... 86 2e-13
16gb|AY065401.1| Arabidopsis thaliana unknown protein (At5g61670) ... 86 2e-13
17gb|AY094431.1| Arabidopsis thaliana AT5g61670/k11j9_190 mRNA, co... 86 2e-13
18emb|BX832020.1|CNS09ZU3 Arabidopsis thaliana Full-length cDNA Co... 86 2e-13
19emb|BX832296.1|CNS09ZK0 Arabidopsis thaliana Full-length cDNA Co... 86 2e-13
20emb|BX832200.1|CNS09ZMR Arabidopsis thaliana Full-length cDNA Co... 86 2e-13
21emb|BX831353.1|CNS09ZDZ Arabidopsis thaliana Full-length cDNA Co... 86 2e-13
22gb|AY084568.1| Arabidopsis thaliana clone 112078 mRNA, complete ... 86 2e-13
23gb|AY110955.1| Zea mays CL31997_1 mRNA sequence 84 7e-13
24dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 60 1e-05
25dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
26dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
27dbj|AK073974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
28dbj|AK067439.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
29ref|NM_120695.3| Arabidopsis thaliana unknown protein AT5G06130 ... 44 0.64
30ref|NM_180700.2| Arabidopsis thaliana unknown protein AT5G06130 ... 44 0.64
31gb|AY133750.1| Arabidopsis thaliana clone U19942 unknown protein... 44 0.64
32gb|AY072147.1| Arabidopsis thaliana unknown protein (At5g06130) ... 44 0.64
33emb|BX833537.1|CNS0A20K Arabidopsis thaliana Full-length cDNA Co... 44 0.64
34emb|BX830149.1|CNS0A1DX Arabidopsis thaliana Full-length cDNA Co... 44 0.64
35dbj|AP002030.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.64
36gb|AC025771.6| Homo sapiens chromosome 5 clone CTD-2203L19, comp... 42 2.5
37gb|AC024589.5| Homo sapiens chromosome 5 clone RP11-42L13, compl... 42 2.5
38gb|M97572.1|EPTRREB Eptatretus stouti 18s ribosomal RNA (18S rRN... 42 2.5 
>ref|XM_467076.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score =  434 bits (219), Expect = e-118
 Identities = 381/435 (87%)
 Strand = Plus / Minus

                                                                        
Query: 300  tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 359
            |||||||||| || || ||||| || || ||||||||||||||||||||||| || ||||
Sbjct: 1182 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 1123

                                                                        
Query: 360  ggcacgtggggcacatcacctttcctgcaccagagcaatttggacatctctcggtttttg 419
            | || || || ||||||||||||||||| || || |||||||| || ||||| ||| |||
Sbjct: 1122 gacatgttggacacatcacctttcctgcgcctgaacaatttgggcacctctctgttcttg 1063

                                                                        
Query: 420  gtgctgataaaggttgatcaccatcactgaatgtcgaaacaggctcagtaagcacaacag 479
            | |  |||||||| ||||||||||| |||||||| ||||| || ||||||||||| | ||
Sbjct: 1062 gcgtagataaaggctgatcaccatcgctgaatgttgaaaccggttcagtaagcaccagag 1003

                                                                        
Query: 480  ctcccgtgcttgaacagcgggcacaagccagatacccagttcctaaacaatacttgcacc 539
             ||| || ||||||||||| ||||| ||||| || ||||||||||||||||| |||||||
Sbjct: 1002 ttccggtacttgaacagcgagcacaggccaggtatccagttcctaaacaatatttgcacc 943

                                                                        
Query: 540  gtttatgctcctgttgcttgacattgtttatctcaacaaccattagggcggagataactc 599
            | ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 942  gcttatgctcctgctgtttgacattgttgatctcaacaaccattagagcggagataactc 883

                                                                        
Query: 600  cgactgctccacctgagaaggatgccacaataggatctacctggctcagttgcataggca 659
            | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 882  caactgctccacctgagaacgatgccacaataggatctacctgactcagttgcatcggca 823

                                                                        
Query: 660  aatgaacatttcggatgaaatctgcataagatgtgcctcctataccaagtttaagttcca 719
            |||| ||| | |||||||| |||||||||||||| ||||| | ||| |||||||||||||
Sbjct: 822  aatggacactgcggatgaagtctgcataagatgttcctcccacaccgagtttaagttcca 763

                           
Query: 720  gaattggtgcaagaa 734
            |||||||||||||||
Sbjct: 762  gaattggtgcaagaa 748
to top
>dbj|AK099767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095B06, full
            insert sequence
          Length = 1437

 Score =  434 bits (219), Expect = e-118
 Identities = 381/435 (87%)
 Strand = Plus / Minus

                                                                        
Query: 300  tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 359
            |||||||||| || || ||||| || || ||||||||||||||||||||||| || ||||
Sbjct: 1182 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 1123

                                                                        
Query: 360  ggcacgtggggcacatcacctttcctgcaccagagcaatttggacatctctcggtttttg 419
            | || || || ||||||||||||||||| || || |||||||| || ||||| ||| |||
Sbjct: 1122 gacatgttggacacatcacctttcctgcgcctgaacaatttgggcacctctctgttcttg 1063

                                                                        
Query: 420  gtgctgataaaggttgatcaccatcactgaatgtcgaaacaggctcagtaagcacaacag 479
            | |  |||||||| ||||||||||| |||||||| ||||| || ||||||||||| | ||
Sbjct: 1062 gcgtagataaaggctgatcaccatcgctgaatgttgaaaccggttcagtaagcaccagag 1003

                                                                        
Query: 480  ctcccgtgcttgaacagcgggcacaagccagatacccagttcctaaacaatacttgcacc 539
             ||| || ||||||||||| ||||| ||||| || ||||||||||||||||| |||||||
Sbjct: 1002 ttccggtacttgaacagcgagcacaggccaggtatccagttcctaaacaatatttgcacc 943

                                                                        
Query: 540  gtttatgctcctgttgcttgacattgtttatctcaacaaccattagggcggagataactc 599
            | ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 942  gcttatgctcctgctgtttgacattgttgatctcaacaaccattagagcggagataactc 883

                                                                        
Query: 600  cgactgctccacctgagaaggatgccacaataggatctacctggctcagttgcataggca 659
            | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 882  caactgctccacctgagaacgatgccacaataggatctacctgactcagttgcatcggca 823

                                                                        
Query: 660  aatgaacatttcggatgaaatctgcataagatgtgcctcctataccaagtttaagttcca 719
            |||| ||| | |||||||| |||||||||||||| ||||| | ||| |||||||||||||
Sbjct: 822  aatggacactgcggatgaagtctgcataagatgttcctcccacaccgagtttaagttcca 763

                           
Query: 720  gaattggtgcaagaa 734
            |||||||||||||||
Sbjct: 762  gaattggtgcaagaa 748
to top
>dbj|AK061454.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G08, full
           insert sequence
          Length = 1153

 Score =  434 bits (219), Expect = e-118
 Identities = 381/435 (87%)
 Strand = Plus / Minus

                                                                       
Query: 300 tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 359
           |||||||||| || || ||||| || || ||||||||||||||||||||||| || ||||
Sbjct: 897 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 838

                                                                       
Query: 360 ggcacgtggggcacatcacctttcctgcaccagagcaatttggacatctctcggtttttg 419
           | || || || ||||||||||||||||| || || |||||||| || ||||| ||| |||
Sbjct: 837 gacatgttggacacatcacctttcctgcgcctgaacaatttgggcacctctctgttcttg 778

                                                                       
Query: 420 gtgctgataaaggttgatcaccatcactgaatgtcgaaacaggctcagtaagcacaacag 479
           | |  |||||||| ||||||||||| |||||||| ||||| || ||||||||||| | ||
Sbjct: 777 gcgtagataaaggctgatcaccatcgctgaatgttgaaaccggttcagtaagcaccagag 718

                                                                       
Query: 480 ctcccgtgcttgaacagcgggcacaagccagatacccagttcctaaacaatacttgcacc 539
            ||| || ||||||||||| ||||| ||||| || ||||||||||||||||| |||||||
Sbjct: 717 ttccggtacttgaacagcgagcacaggccaggtatccagttcctaaacaatatttgcacc 658

                                                                       
Query: 540 gtttatgctcctgttgcttgacattgtttatctcaacaaccattagggcggagataactc 599
           | ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 657 gcttatgctcctgctgtttgacattgttgatctcaacaaccattagagcggagataactc 598

                                                                       
Query: 600 cgactgctccacctgagaaggatgccacaataggatctacctggctcagttgcataggca 659
           | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 597 caactgctccacctgagaacgatgccacaataggatctacctgactcagttgcatcggca 538

                                                                       
Query: 660 aatgaacatttcggatgaaatctgcataagatgtgcctcctataccaagtttaagttcca 719
           |||| ||| | |||||||| |||||||||||||| ||||| | ||| |||||||||||||
Sbjct: 537 aatggacactgcggatgaagtctgcataagatgttcctcccacaccgagtttaagttcca 478

                          
Query: 720 gaattggtgcaagaa 734
           |||||||||||||||
Sbjct: 477 gaattggtgcaagaa 463
to top
>dbj|AK058796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H08, full
           insert sequence
          Length = 1024

 Score =  418 bits (211), Expect = e-113
 Identities = 379/435 (87%)
 Strand = Plus / Minus

                                                                       
Query: 300 tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 359
           |||||||||| || || ||||| || || ||||||||||||||||||||||| || ||||
Sbjct: 553 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 494

                                                                       
Query: 360 ggcacgtggggcacatcacctttcctgcaccagagcaatttggacatctctcggtttttg 419
           | || || || ||||||||||||||||| || || |||||||| || ||||| ||| |||
Sbjct: 493 gacatgttggacacatcacctttcctgcgcctgaacaatttgggcacctctctgttcttg 434

                                                                       
Query: 420 gtgctgataaaggttgatcaccatcactgaatgtcgaaacaggctcagtaagcacaacag 479
           | |  |||||||| ||||||||||| |||||||| ||||| || ||||||||||| | ||
Sbjct: 433 gcgtagataaaggctgatcaccatcgctgaatgttgaaaccggttcagtaagcaccagag 374

                                                                       
Query: 480 ctcccgtgcttgaacagcgggcacaagccagatacccagttcctaaacaatacttgcacc 539
            |||    ||||||||||| ||||| ||||| || ||||||||||||||||| |||||||
Sbjct: 373 ttcctaaacttgaacagcgagcacaggccaggtatccagttcctaaacaatatttgcacc 314

                                                                       
Query: 540 gtttatgctcctgttgcttgacattgtttatctcaacaaccattagggcggagataactc 599
           | ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 313 gcttatgctcctgctgtttgacattgttgatctcaacaaccattagagcggagataactc 254

                                                                       
Query: 600 cgactgctccacctgagaaggatgccacaataggatctacctggctcagttgcataggca 659
           | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 253 caactgctccacctgagaacgatgccacaataggatctacctgactcagttgcatcggca 194

                                                                       
Query: 660 aatgaacatttcggatgaaatctgcataagatgtgcctcctataccaagtttaagttcca 719
           |||| ||| | |||||||| |||||||||||||| ||||| | ||| |||||||||||||
Sbjct: 193 aatggacactgcggatgaagtctgcataagatgttcctcccacaccgagtttaagttcca 134

                          
Query: 720 gaattggtgcaagaa 734
           |||||||||||||||
Sbjct: 133 gaattggtgcaagaa 119
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  190 bits (96), Expect = 4e-45
 Identities = 120/128 (93%)
 Strand = Plus / Plus

                                                                            
Query: 515      ccagttcctaaacaatacttgcaccgtttatgctcctgttgcttgacattgtttatctca 574
                ||||||||||||||||| |||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 26268171 ccagttcctaaacaatatttgcaccgcttatgctcctgctgtttgacattgttgatctca 26268230

                                                                            
Query: 575      acaaccattagggcggagataactccgactgctccacctgagaaggatgccacaatagga 634
                ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 26268231 acaaccattagagcggagataactccaactgctccacctgagaacgatgccacaatagga 26268290

                        
Query: 635      tctacctg 642
                ||||||||
Sbjct: 26268291 tctacctg 26268298



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 112/134 (83%)
 Strand = Plus / Plus

                                                                            
Query: 377      acctttcctgcaccagagcaatttggacatctctcggtttttggtgctgataaaggttga 436
                ||||||||||| || || |||||||| || ||||| ||| |||| |  |||||||| |||
Sbjct: 26267587 acctttcctgcgcctgaacaatttgggcacctctctgttcttggcgtagataaaggctga 26267646

                                                                            
Query: 437      tcaccatcactgaatgtcgaaacaggctcagtaagcacaacagctcccgtgcttgaacag 496
                |||||||| |||||||| ||||| || ||||||||||| | || ||| || |||||||||
Sbjct: 26267647 tcaccatcgctgaatgttgaaaccggttcagtaagcaccagagttccggtacttgaacag 26267706

                              
Query: 497      cgggcacaagccag 510
                || ||||| |||||
Sbjct: 26267707 cgagcacaggccag 26267720



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                            
Query: 644      ctcagttgcataggcaaatgaacatttcggatgaaatctgcataagatgtgcctcctata 703
                ||||||||||| |||||||| ||| | |||||||| |||||||||||||| ||||| | |
Sbjct: 26268419 ctcagttgcatcggcaaatggacactgcggatgaagtctgcataagatgttcctcccaca 26268478

                                 
Query: 704      ccaagtttaagttccag 720
                || ||||||||||||||
Sbjct: 26268479 ccgagtttaagttccag 26268495



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                            
Query: 300      tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 359
                |||||||||| || || ||||| || || ||||||||||||||||||||||| || ||||
Sbjct: 26267391 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 26267450

                                     
Query: 360      ggcacgtggggcacatcacct 380
                | || || || ||||||||||
Sbjct: 26267451 gacatgttggacacatcacct 26267471



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                         
Query: 602      actgctccacctgagaaggatgccacaataggatctacctg 642
                ||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 19735477 actgcaccacctgaaaaggatgccacaatgggatctacctg 19735517



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                       
Query: 326      tcatgctcacttgccattgccatccctgtacagaggcacgtggggcacatcacct 380
                |||||||| |||||||||||| | ||||| || | ||| || |||||||||||||
Sbjct: 19734620 tcatgctcgcttgccattgccgttcctgtgcacaagcaagttgggcacatcacct 19734674
to top
>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:P0491E01
          Length = 136150

 Score =  190 bits (96), Expect = 4e-45
 Identities = 120/128 (93%)
 Strand = Plus / Plus

                                                                       
Query: 515 ccagttcctaaacaatacttgcaccgtttatgctcctgttgcttgacattgtttatctca 574
           ||||||||||||||||| |||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 523 ccagttcctaaacaatatttgcaccgcttatgctcctgctgtttgacattgttgatctca 582

                                                                       
Query: 575 acaaccattagggcggagataactccgactgctccacctgagaaggatgccacaatagga 634
           ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 583 acaaccattagagcggagataactccaactgctccacctgagaacgatgccacaatagga 642

                   
Query: 635 tctacctg 642
           ||||||||
Sbjct: 643 tctacctg 650



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                       
Query: 644 ctcagttgcataggcaaatgaacatttcggatgaaatctgcataagatgtgcctcctata 703
           ||||||||||| |||||||| ||| | |||||||| |||||||||||||| ||||| | |
Sbjct: 771 ctcagttgcatcggcaaatggacactgcggatgaagtctgcataagatgttcctcccaca 830

                            
Query: 704 ccaagtttaagttccag 720
           || ||||||||||||||
Sbjct: 831 ccgagtttaagttccag 847



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 439 accatcactgaatgtcgaaacaggctcagtaagcacaacagctcccgtgcttgaacagcg 498
           |||||| |||||||| ||||| || ||||||||||| | || ||| || |||||||||||
Sbjct: 1   accatcgctgaatgttgaaaccggttcagtaagcaccagagttccggtacttgaacagcg 60

                       
Query: 499 ggcacaagccag 510
            ||||| |||||
Sbjct: 61  agcacaggccag 72
to top
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0012J10
          Length = 132375

 Score =  190 bits (96), Expect = 4e-45
 Identities = 120/128 (93%)
 Strand = Plus / Plus

                                                                         
Query: 515   ccagttcctaaacaatacttgcaccgtttatgctcctgttgcttgacattgtttatctca 574
             ||||||||||||||||| |||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 91012 ccagttcctaaacaatatttgcaccgcttatgctcctgctgtttgacattgttgatctca 91071

                                                                         
Query: 575   acaaccattagggcggagataactccgactgctccacctgagaaggatgccacaatagga 634
             ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 91072 acaaccattagagcggagataactccaactgctccacctgagaacgatgccacaatagga 91131

                     
Query: 635   tctacctg 642
             ||||||||
Sbjct: 91132 tctacctg 91139



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 112/134 (83%)
 Strand = Plus / Plus

                                                                         
Query: 377   acctttcctgcaccagagcaatttggacatctctcggtttttggtgctgataaaggttga 436
             ||||||||||| || || |||||||| || ||||| ||| |||| |  |||||||| |||
Sbjct: 90428 acctttcctgcgcctgaacaatttgggcacctctctgttcttggcgtagataaaggctga 90487

                                                                         
Query: 437   tcaccatcactgaatgtcgaaacaggctcagtaagcacaacagctcccgtgcttgaacag 496
             |||||||| |||||||| ||||| || ||||||||||| | || ||| || |||||||||
Sbjct: 90488 tcaccatcgctgaatgttgaaaccggttcagtaagcaccagagttccggtacttgaacag 90547

                           
Query: 497   cgggcacaagccag 510
             || ||||| |||||
Sbjct: 90548 cgagcacaggccag 90561



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                         
Query: 644   ctcagttgcataggcaaatgaacatttcggatgaaatctgcataagatgtgcctcctata 703
             ||||||||||| |||||||| ||| | |||||||| |||||||||||||| ||||| | |
Sbjct: 91260 ctcagttgcatcggcaaatggacactgcggatgaagtctgcataagatgttcctcccaca 91319

                              
Query: 704   ccaagtttaagttccag 720
             || ||||||||||||||
Sbjct: 91320 ccgagtttaagttccag 91336



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                         
Query: 300   tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 359
             |||||||||| || || ||||| || || ||||||||||||||||||||||| || ||||
Sbjct: 90232 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 90291

                                  
Query: 360   ggcacgtggggcacatcacct 380
             | || || || ||||||||||
Sbjct: 90292 gacatgttggacacatcacct 90312
to top
>gb|BT013273.1| Lycopersicon esculentum clone 134850R, mRNA sequence
          Length = 1142

 Score =  133 bits (67), Expect = 9e-28
 Identities = 283/355 (79%)
 Strand = Plus / Minus

                                                                       
Query: 300 tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 359
           ||||||||||||| || ||||| ||||| || ||||||||||| |||||||| ||||| |
Sbjct: 999 tttaatcaaatggatcaattcgtggatcgtgttcacttgccatagccatcccagtacaaa 940

                                                                       
Query: 360 ggcacgtggggcacatcacctttcctgcaccagagcaatttggacatctctcggtttttg 419
           | ||||| |||||||| |||||||||| ||| || || || | ||| ||||| ||||| |
Sbjct: 939 gacacgtagggcacatgacctttcctgaacctgaacagttggaacacctctctgttttag 880

                                                                       
Query: 420 gtgctgataaaggttgatcaccatcactgaatgtcgaaacaggctcagtaagcacaacag 479
           ||| ||| | ||| |  ||  || ||   | ||| |||||||||||| |||| |||| ||
Sbjct: 879 gtggtgacagaggcttgtccgcaccataaattgttgaaacaggctcaataagaacaagag 820

                                                                       
Query: 480 ctcccgtgcttgaacagcgggcacaagccagatacccagttcctaaacaatacttgcacc 539
            ||| ||| | ||||| || |||||||| ||||| || ||||| | ||| |||||||| |
Sbjct: 819 atccagtgttggaacatcgagcacaagcaagatatcctgttccaagacagtacttgcatc 760

                                                                       
Query: 540 gtttatgctcctgttgcttgacattgtttatctcaacaaccattagggcggagataactc 599
             ||||||||||| || || ||||| || || ||||||||||| |  || ||||| || |
Sbjct: 759 tcttatgctcctgctgtttcacattattaatttcaacaaccatcaaagcagagatcaccc 700

                                                                  
Query: 600 cgactgctccacctgagaaggatgccacaataggatctacctggctcagttgcat 654
           | ||||| || || ||||| ||||||||||| ||||| ||||| |||||||||||
Sbjct: 699 caactgcacccccagagaatgatgccacaattggatcgacctgactcagttgcat 645
to top
>emb|BX831630.1|CNS09ZP5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH1ZE04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1380

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
           |||||||| || |||||||||||||| ||||| ||||| |||||||| || || || |||
Sbjct: 930 gggtcgatacgaggatcatgctcactggccatagccattcctgtacacagacatgtcggg 871

                                                          
Query: 371 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
           |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 870 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 824



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 567 atgaaatctgcatacgatgtacctcctatacc 536
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                            
Query: 377      acctttcctgcaccagagcaatttggacatctctcggtttttggtgctgataaaggttga 436
                |||||||||||||| || |||||||| ||  |||| ||| |||| |  |||||||| |||
Sbjct: 11714043 acctttcctgcacccgaacaatttgggcacgtctctgttcttggcgtagataaaggctga 11713984

                                                                            
Query: 437      tcaccatcactgaatgtcgaaacaggctcagtaagcacaacagctcccgtgcttgaacag 496
                |||||||| |||||||| ||||| || ||||||||||| | || ||| || |||||||||
Sbjct: 11713983 tcaccatcgctgaatgttgaaaccggttcagtaagcaccagagttccggtacttgaacag 11713924

                        
Query: 497      cgggcaca 504
                || |||||
Sbjct: 11713923 cgagcaca 11713916
to top
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711F01
          Length = 193091

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                          
Query: 377    acctttcctgcaccagagcaatttggacatctctcggtttttggtgctgataaaggttga 436
              |||||||||||||| || |||||||| ||  |||| ||| |||| |  |||||||| |||
Sbjct: 148677 acctttcctgcacccgaacaatttgggcacgtctctgttcttggcgtagataaaggctga 148618

                                                                          
Query: 437    tcaccatcactgaatgtcgaaacaggctcagtaagcacaacagctcccgtgcttgaacag 496
              |||||||| |||||||| ||||| || ||||||||||| | || ||| || |||||||||
Sbjct: 148617 tcaccatcgctgaatgttgaaaccggttcagtaagcaccagagttccggtacttgaacag 148558

                      
Query: 497    cgggcaca 504
              || |||||
Sbjct: 148557 cgagcaca 148550
to top
>ref|NM_203246.1| Arabidopsis thaliana unknown protein AT5G61670 transcript variant
           AT5G61670.2 mRNA, complete cds
          Length = 1452

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
           |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 962 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 903

                                                          
Query: 371 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
           |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 902 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 856



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 599 atgaaatctgcatacgatgtacctcctatacc 568
to top
>ref|NM_125561.2| Arabidopsis thaliana unknown protein AT5G61670 transcript variant
            AT5G61670.1 mRNA, complete cds
          Length = 1162

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 311  gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
            |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 1005 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 946

                                                           
Query: 371  cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
            |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 945  cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 899



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 642 atgaaatctgcatacgatgtacctcctatacc 611
to top
>gb|AY149953.1| Arabidopsis thaliana At5g61670/k11j9_190 mRNA, complete cds
          Length = 924

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
           |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 914 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 855

                                                          
Query: 371 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
           |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 854 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 808



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 551 atgaaatctgcatacgatgtacctcctatacc 520
to top
>gb|AY117226.1| Arabidopsis thaliana unknown protein (At5g61670) mRNA, complete cds
          Length = 955

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
           |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 914 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 855

                                                          
Query: 371 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
           |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 854 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 808



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 551 atgaaatctgcatacgatgtacctcctatacc 520
to top
>gb|AY065401.1| Arabidopsis thaliana unknown protein (At5g61670) mRNA, complete cds
          Length = 1122

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
           |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 959 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 900

                                                          
Query: 371 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
           |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 899 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 853



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 596 atgaaatctgcatacgatgtacctcctatacc 565
to top
>gb|AY094431.1| Arabidopsis thaliana AT5g61670/k11j9_190 mRNA, complete cds
          Length = 1100

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
           |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 953 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 894

                                                          
Query: 371 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
           |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 893 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 847



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 590 atgaaatctgcatacgatgtacctcctatacc 559
to top
>emb|BX832020.1|CNS09ZU3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH47ZA04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1351

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 311  gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
            |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 1230 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 1171

                                                           
Query: 371  cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
            |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 1170 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 1124



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 867 atgaaatctgcatacgatgtacctcctatacc 836
to top
>emb|BX832296.1|CNS09ZK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH64ZB03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1098

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 311  gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
            |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 1006 gggtcgatacgaggatcatgctcactggccatagccattcctgttcacagacatgtcggg 947

                                                           
Query: 371  cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
            |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 946  cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 900



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 643 atgaaatctgcatacgatgtacctcctatacc 612
to top
>emb|BX832200.1|CNS09ZMR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH58ZG07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1452

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
           |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 962 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 903

                                                          
Query: 371 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
           |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 902 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 856



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 599 atgaaatctgcatacgatgtacctcctatacc 568
to top
>emb|BX831353.1|CNS09ZDZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS80ZE08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1174

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 311  gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
            |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 1088 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 1029

                                                           
Query: 371  cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
            |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 1028 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 982



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 677 aaatctgcataagatgtgcctcctatacc 705
           ||||||||||| ||||| |||||||||||
Sbjct: 597 aaatctgcatacgatgtacctcctatacc 569
to top
>gb|AY084568.1| Arabidopsis thaliana clone 112078 mRNA, complete sequence
          Length = 1118

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
           |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 960 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 901

                                                          
Query: 371 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 417
           |||||||||||||| ||||| || || |||| |||||| ||||||||
Sbjct: 900 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 854



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 674 atgaaatctgcataagatgtgcctcctatacc 705
           |||||||||||||| ||||| |||||||||||
Sbjct: 597 atgaaatctgcatacgatgtacctcctatacc 566
to top
>gb|AY110955.1| Zea mays CL31997_1 mRNA sequence
          Length = 855

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                       
Query: 302 taatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacagagg 361
           |||||||| ||||| || || |||||||||||||||||||| ||||| ||||| || | |
Sbjct: 176 taatcaaaagggtcaatccgtggatcatgctcacttgccatcgccattcctgtgcacaag 235

                                                 
Query: 362 cacgtggggcacatcacctttcctgcaccagagcaatt 399
           ||||| || |||||||||||||| || ||||| |||||
Sbjct: 236 cacgtcggacacatcacctttccagctccagaacaatt 273



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 590 gagataactccgactgctccacctgagaaggatgccacaataggatctacctggctca 647
           |||||||| || ||||| |||||||| || |||||||| |||||||||||||| ||||
Sbjct: 452 gagataacaccaactgcgccacctgaaaatgatgccactataggatctacctgactca 509
to top
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9
          Length = 69142

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                         
Query: 311   gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 370
             |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 59766 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 59707

                       
Query: 371   cacatcacct 380
             ||||||||||
Sbjct: 59706 cacatcacct 59697



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 674   atgaaatctgcataagatgtgcctcctatacc 705
             |||||||||||||| ||||| |||||||||||
Sbjct: 59093 atgaaatctgcatacgatgtacctcctatacc 59062
to top
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_G07
          Length = 149119

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 602   actgctccacctgagaaggatgccacaataggatctacctg 642
             ||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 44028 actgcaccacctgaaaaggatgccacaatgggatctacctg 44068



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 326   tcatgctcacttgccattgccatccctgtacagaggcacgtggggcacatcacct 380
             |||||||| |||||||||||| | ||||| || | ||| || |||||||||||||
Sbjct: 43171 tcatgctcgcttgccattgccgttcctgtgcacaagcaagttgggcacatcacct 43225
to top
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1136H02
          Length = 145086

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 602   actgctccacctgagaaggatgccacaataggatctacctg 642
             ||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 92235 actgcaccacctgaaaaggatgccacaatgggatctacctg 92275



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 326   tcatgctcacttgccattgccatccctgtacagaggcacgtggggcacatcacct 380
             |||||||| |||||||||||| | ||||| || | ||| || |||||||||||||
Sbjct: 91378 tcatgctcgcttgccattgccgttcctgtgcacaagcaagttgggcacatcacct 91432
to top
>dbj|AK073974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073K01, full
           insert sequence
          Length = 1359

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 602 actgctccacctgagaaggatgccacaataggatctacctg 642
           ||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 712 actgcaccacctgaaaaggatgccacaatgggatctacctg 672



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 326 tcatgctcacttgccattgccatccctgtacagaggcacgtggggcacatcacctttcc 384
           |||||||| |||||||||||| | ||||| || | ||| || |||||||||||||||||
Sbjct: 985 tcatgctcgcttgccattgccgttcctgtgcacaagcaagttgggcacatcacctttcc 927
to top
>dbj|AK067439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100E03, full
           insert sequence
          Length = 1166

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 602 actgctccacctgagaaggatgccacaataggatctacctg 642
           ||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 671 actgcaccacctgaaaaggatgccacaatgggatctacctg 631



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 326 tcatgctcacttgccattgccatccctgtacagaggcacgtggggcacatcacctttcc 384
           |||||||| |||||||||||| | ||||| || | ||| || |||||||||||||||||
Sbjct: 944 tcatgctcgcttgccattgccgttcctgtgcacaagcaagttgggcacatcacctttcc 886
to top
>ref|NM_120695.3| Arabidopsis thaliana unknown protein AT5G06130 transcript variant
           AT5G06130.2 mRNA, complete cds
          Length = 1362

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 371 cacatcacctttcctgcaccagagcaatttggacatct 408
           ||||||||||||||||| || || |||||| |||||||
Sbjct: 987 cacatcacctttcctgcgccggaacaatttagacatct 950



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 620 gatgccacaataggatctacctggct 645
           ||||||||||| ||||||||||||||
Sbjct: 738 gatgccacaattggatctacctggct 713
to top
>ref|NM_180700.2| Arabidopsis thaliana unknown protein AT5G06130 transcript variant
            AT5G06130.1 mRNA, complete cds
          Length = 1576

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 371  cacatcacctttcctgcaccagagcaatttggacatct 408
            ||||||||||||||||| || || |||||| |||||||
Sbjct: 1201 cacatcacctttcctgcgccggaacaatttagacatct 1164



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 620 gatgccacaataggatctacctggct 645
           ||||||||||| ||||||||||||||
Sbjct: 952 gatgccacaattggatctacctggct 927
to top
>gb|AY133750.1| Arabidopsis thaliana clone U19942 unknown protein (At5g06130) mRNA,
           complete cds
          Length = 979

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 371 cacatcacctttcctgcaccagagcaatttggacatct 408
           ||||||||||||||||| || || |||||| |||||||
Sbjct: 878 cacatcacctttcctgcgccggaacaatttagacatct 841



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 620 gatgccacaataggatctacctggct 645
           ||||||||||| ||||||||||||||
Sbjct: 629 gatgccacaattggatctacctggct 604
to top
>gb|AY072147.1| Arabidopsis thaliana unknown protein (At5g06130) mRNA, complete cds
          Length = 1224

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 371 cacatcacctttcctgcaccagagcaatttggacatct 408
           ||||||||||||||||| || || |||||| |||||||
Sbjct: 919 cacatcacctttcctgcgccggaacaatttagacatct 882



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 620 gatgccacaataggatctacctggct 645
           ||||||||||| ||||||||||||||
Sbjct: 670 gatgccacaattggatctacctggct 645
to top
>emb|BX833537.1|CNS0A20K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL60ZH08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 944

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 620 gatgccacaataggatctacctggct 645
           ||||||||||| ||||||||||||||
Sbjct: 423 gatgccacaattggatctacctggct 398
to top
>emb|BX830149.1|CNS0A1DX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB62ZF12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1347

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 371  cacatcacctttcctgcaccagagcaatttggacatct 408
            ||||||||||||||||| || || |||||| |||||||
Sbjct: 1113 cacatcacctttcctgcgccggaacaatttagacatct 1076



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 620 gatgccacaataggatctacctggct 645
           ||||||||||| ||||||||||||||
Sbjct: 864 gatgccacaattggatctacctggct 839
to top
>dbj|AP002030.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16F4
          Length = 34867

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 620   gatgccacaataggatctacctggct 645
             ||||||||||| ||||||||||||||
Sbjct: 32908 gatgccacaattggatctacctggct 32933
to top
>gb|AC025771.6| Homo sapiens chromosome 5 clone CTD-2203L19, complete sequence
          Length = 134286

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    aaggtatactacacactgaca 56
             |||||||||||||||||||||
Sbjct: 81429 aaggtatactacacactgaca 81449
to top
>gb|AC024589.5| Homo sapiens chromosome 5 clone RP11-42L13, complete sequence
          Length = 170272

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    aaggtatactacacactgaca 56
             |||||||||||||||||||||
Sbjct: 50037 aaggtatactacacactgaca 50057
to top
>gb|M97572.1|EPTRREB Eptatretus stouti 18s ribosomal RNA (18S rRNA), 5' end
          Length = 1959

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 410 tcggtttttggtgctgataaa 430
           |||||||||||||||||||||
Sbjct: 252 tcggtttttggtgctgataaa 232


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,617,960
Number of Sequences: 3902068
Number of extensions: 5617960
Number of successful extensions: 98889
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98693
Number of HSP's gapped (non-prelim): 195
length of query: 734
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 711
effective length of database: 17,143,297,704
effective search space: 12188884667544
effective search space used: 12188884667544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
to top