ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal4p24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TRXL1_ARATH (O64654) Thioredoxin-like 1 37 0.015

>TRXL1_ARATH (O64654) Thioredoxin-like 1|
          Length = 275

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -2

Query: 123 EESXXXALAANKDLQFTYTKQPEPVXSGDSEFIAPGS-PRLP 1
           EE    ALAANK+L FTYT +P PV   + E   P S P LP
Sbjct: 218 EEKELVALAANKELNFTYTPKPVPV---EKEAATPDSNPSLP 256


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,074,815
Number of Sequences: 219361
Number of extensions: 145631
Number of successful extensions: 289
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 80,573,946
effective HSP length: 16
effective length of database: 77,064,170
effective search space used: 1849540080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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